BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00015210
         (305 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   180   2e-43
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   176   3e-42
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   157   1e-36
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      157   1e-36
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   157   2e-36
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   157   2e-36
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   157   2e-36
emb|CAA09894.1| RNA-directed RNA polymerase [Arabidopsis thaliana]    157   2e-36
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       157   2e-36
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   156   2e-36
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]   156   3e-36
emb|CBI26821.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   155   4e-36
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      155   6e-36
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   154   9e-36
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   154   9e-36
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   154   9e-36
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   154   2e-35
gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       153   3e-35

>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  180 bits (457), Expect = 2e-43
 Identities = 90/101 (89%), Positives = 94/101 (93%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR+WMGDFSSIRNVAKYAARLGQSF SSTETLSVAQ EV++IPDVEVV NGTTYIFSDG
Sbjct: 407 DIRRWMGDFSSIRNVAKYAARLGQSFGSSTETLSVAQNEVEKIPDVEVVTNGTTYIFSDG 466

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKISVDFA +VA KCGLK  IPSAFQIRYGGYKGVVAIDP
Sbjct: 467 IGKISVDFARRVAIKCGLKSNIPSAFQIRYGGYKGVVAIDP 507


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  176 bits (446), Expect = 3e-42
 Identities = 86/101 (85%), Positives = 94/101 (93%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR+WMGDFSSIRNVAKYAARLGQSFSSSTETL VAQ EV+RIPDVEVVR+GTTYIFSDG
Sbjct: 474 DIRRWMGDFSSIRNVAKYAARLGQSFSSSTETLKVAQYEVERIPDVEVVRDGTTYIFSDG 533

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS DFA +VA KCG++  +PSAFQIRYGGYKGVVA+DP
Sbjct: 534 IGKISSDFARRVATKCGIRDGVPSAFQIRYGGYKGVVAVDP 574


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
           family protein [Populus trichocarpa]
          Length = 1133

 Score =  157 bits (397), Expect = 1e-36
 Identities = 75/101 (74%), Positives = 84/101 (83%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR WMG F  IRNVA+YAARLGQSF SSTETLSV+  E++ IPD+EV R GT Y+FSDG
Sbjct: 481 DIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDG 540

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS +FA KVA KCG KG+ PSAFQIRY GYKGVVA+DP
Sbjct: 541 IGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDP 581


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  157 bits (397), Expect = 1e-36
 Identities = 75/101 (74%), Positives = 88/101 (87%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR WMG+FS IRNVAKYAARLGQSFSSSTETLSV+++E+  IPD+E++++G  Y+FSDG
Sbjct: 474 DIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSDG 533

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS +FA KVA KC LKG  PSAFQIR GG+KGVVAIDP
Sbjct: 534 IGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDP 574


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/100 (75%), Positives = 85/100 (85%)
 Frame = +3

Query: 6   IRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDGI 185
           IR WMGDF  IRNVAKYAARLGQSFSSS ETL+V  +E++ IPDVE++  GT Y+FSDGI
Sbjct: 479 IRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGI 538

Query: 186 GKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           GKIS +FA KVARKCGL  + PSAFQIRYGGYKGVVA+DP
Sbjct: 539 GKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDP 578


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/100 (75%), Positives = 85/100 (85%)
 Frame = +3

Query: 6   IRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDGI 185
           IR WMGDF  IRNVAKYAARLGQSFSSS ETL+V  +E++ IPDVE++  GT Y+FSDGI
Sbjct: 479 IRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGI 538

Query: 186 GKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           GKIS +FA KVARKCGL  + PSAFQIRYGGYKGVVA+DP
Sbjct: 539 GKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDP 578


>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  157 bits (396), Expect = 2e-36
 Identities = 76/101 (75%), Positives = 86/101 (85%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR  MGDFS IRNVAKYAARLGQSFSSS ETL VA+ E++ IPD+E+ R+GTTY+FSDG
Sbjct: 12  DIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIEIHRDGTTYVFSDG 71

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS + AH+VA KCG K   PSAFQIRYGGYKGVVA+DP
Sbjct: 72  IGKISAELAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDP 112


>emb|CAA09894.1| RNA-directed RNA polymerase [Arabidopsis thaliana]
          Length = 513

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/100 (75%), Positives = 85/100 (85%)
 Frame = +3

Query: 6   IRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDGI 185
           IR WMGDF  IRNVAKYAARLGQSFSSS ETL+V  +E++ IPDVE++  GT Y+FSDGI
Sbjct: 1   IRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGI 60

Query: 186 GKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           GKIS +FA KVARKCGL  + PSAFQIRYGGYKGVVA+DP
Sbjct: 61  GKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDP 100


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  157 bits (396), Expect = 2e-36
 Identities = 78/101 (77%), Positives = 87/101 (86%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR WMGDF  IRNVAKYAARLGQSF SS ETLSV + E+K IPDVEV  +GT Y+FSDG
Sbjct: 163 DIRTWMGDFQQIRNVAKYAARLGQSFGSSRETLSVGRHEIKYIPDVEV--HGTNYVFSDG 220

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS DFAH+VA+KCGL+ + PSAFQIRYGGYKGVVA+DP
Sbjct: 221 IGKISADFAHRVAKKCGLQ-HTPSAFQIRYGGYKGVVAVDP 260


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  156 bits (395), Expect = 2e-36
 Identities = 74/101 (73%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           +IR WMGDFS IRNVAKYAARLGQSFSSS ETL VA++E++ IPD+E+ +  TTY+FSDG
Sbjct: 401 EIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDG 460

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS   AH+VA KCG K   PSAFQIRYGGYKGVVA+DP
Sbjct: 461 IGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDP 501


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  156 bits (395), Expect = 2e-36
 Identities = 74/101 (73%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           +IR WMGDFS IRNVAKYAARLGQSFSSS ETL VA++E++ IPD+E+ +  TTY+FSDG
Sbjct: 470 EIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDG 529

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS   AH+VA KCG K   PSAFQIRYGGYKGVVA+DP
Sbjct: 530 IGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDP 570


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score =  156 bits (394), Expect = 3e-36
 Identities = 74/101 (73%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           +IR WMGDFS IRNVAKYAARLGQSFSSS ETL VA++E++ IPD+E+ +  TTY+FSDG
Sbjct: 12  EIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKXRTTYVFSDG 71

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS   AH+VA KCG K   PSAFQIRYGGYKGVVA+DP
Sbjct: 72  IGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDP 112


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  155 bits (393), Expect = 4e-36
 Identities = 76/101 (75%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR  MGDFS IRNVAKYAARLGQSFSSS ETL VA+ E++ IPD+E  R+GTTY+FSDG
Sbjct: 435 DIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDG 494

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS + AH+VA KCG K   PSAFQIRYGGYKGVVA+DP
Sbjct: 495 IGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDP 535


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  155 bits (393), Expect = 4e-36
 Identities = 76/101 (75%), Positives = 85/101 (84%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR  MGDFS IRNVAKYAARLGQSFSSS ETL VA+ E++ IPD+E  R+GTTY+FSDG
Sbjct: 468 DIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDG 527

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS + AH+VA KCG K   PSAFQIRYGGYKGVVA+DP
Sbjct: 528 IGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDP 568


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  155 bits (392), Expect = 6e-36
 Identities = 74/101 (73%), Positives = 87/101 (86%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR WMG+FS IRNVAKYAARLGQSFSSSTETLSV+++E+  IPD+E++++G  Y+F DG
Sbjct: 474 DIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFPDG 533

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS +FA KVA KC LKG  PSAFQIR GG+KGVVAIDP
Sbjct: 534 IGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDP 574


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  154 bits (390), Expect = 9e-36
 Identities = 73/100 (73%), Positives = 85/100 (85%)
 Frame = +3

Query: 6   IRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDGI 185
           IR WMGDF  IRNVAKYAARLGQSFSSS ETL+V  +E++ IPDVE++  GT Y+FSDGI
Sbjct: 480 IRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGI 539

Query: 186 GKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           GKIS +FA +VA+KCGL  + PSAFQIRYGGYKGVVA+DP
Sbjct: 540 GKISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDP 579


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  154 bits (390), Expect = 9e-36
 Identities = 73/100 (73%), Positives = 85/100 (85%)
 Frame = +3

Query: 6   IRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDGI 185
           IR WMGDF  IRNVAKYAARLGQSFSSS ETL+V  +E++ IPDVE++  GT Y+FSDGI
Sbjct: 480 IRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGI 539

Query: 186 GKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           GKIS +FA +VA+KCGL  + PSAFQIRYGGYKGVVA+DP
Sbjct: 540 GKISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDP 579


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  154 bits (390), Expect = 9e-36
 Identities = 73/100 (73%), Positives = 85/100 (85%)
 Frame = +3

Query: 6   IRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDGI 185
           IR WMGDF  IRNVAKYAARLGQSFSSS ETL+V  +E++ IPDVE++  GT Y+FSDGI
Sbjct: 470 IRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGI 529

Query: 186 GKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           GKIS +FA +VA+KCGL  + PSAFQIRYGGYKGVVA+DP
Sbjct: 530 GKISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDP 569


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  154 bits (388), Expect = 2e-35
 Identities = 77/101 (76%), Positives = 88/101 (87%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR WMGDFS I+NVAKYAARLGQSF SSTETLSV + E++ IPDV+V  +GT+Y+FSDG
Sbjct: 318 DIRTWMGDFSQIKNVAKYAARLGQSFGSSTETLSVLRHEIEVIPDVKV--HGTSYVFSDG 375

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS DFA +VA KCGL+ Y PSAFQIRYGGYKGVVA+DP
Sbjct: 376 IGKISADFARRVASKCGLQ-YTPSAFQIRYGGYKGVVAVDP 415


>gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 862

 Score =  153 bits (386), Expect = 3e-35
 Identities = 73/101 (72%), Positives = 83/101 (82%)
 Frame = +3

Query: 3   DIRQWMGDFSSIRNVAKYAARLGQSFSSSTETLSVAQEEVKRIPDVEVVRNGTTYIFSDG 182
           DIR WMGDF  I+NVA+YAARLGQSF SS ET  V ++EV+ IPD+EV R+G  Y FSDG
Sbjct: 462 DIRNWMGDFHDIKNVARYAARLGQSFGSSHETFRVGRDEVELIPDIEVKRDGKNYCFSDG 521

Query: 183 IGKISVDFAHKVARKCGLKGYIPSAFQIRYGGYKGVVAIDP 305
           IGKIS DFA +VA+KCGL  Y PSAFQIRYGGYKGVVA+DP
Sbjct: 522 IGKISEDFAKEVAKKCGLNRYTPSAFQIRYGGYKGVVAVDP 562