BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00014722
         (1347 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   521   e-145
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   442   e-121
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   435   e-119
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   432   e-118
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              372   e-100
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   372   e-100
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   347   9e-93
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   347   9e-93
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   347   9e-93
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   342   3e-91
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   341   5e-91
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   337   5e-90
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   336   1e-89
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   331   4e-88
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   328   4e-87
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   325   3e-86
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   325   3e-86
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   323   8e-86
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   320   1e-84
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   318   3e-84

>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  521 bits (1343), Expect = e-145
 Identities = 272/475 (57%), Positives = 352/475 (74%), Gaps = 27/475 (5%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQLSINRRKVA 181
            QEILM+A+  I+TP+LTCPFS++RSKR+VV+LV+ VKKVSVADL+E+M+VQLS+N +  A
Sbjct: 1235 QEILMSASEVIKTPLLTCPFSQWRSKREVVSLVSHVKKVSVADLIENMEVQLSVNHKTAA 1294

Query: 182  RTYKLNMKLKETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKNFMXXXXXXX 361
            R YKL M LK+TEFVS +++ +TL+  FL E+E AIENH+++LS++SGIKNF        
Sbjct: 1295 RVYKLKMTLKDTEFVSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKS 1354

Query: 362  E-DAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXA-------QKRTDEINYGDESDVDHCE 517
              +A+ED SG GT                            Q+ TD+++Y D SD    E
Sbjct: 1355 SNEADEDESGLGTENAGVNDDDDDDDDDKGDDLGSDVQKRKQQATDDMDYEDGSDGGAAE 1414

Query: 518  DELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKEDETNDEQNEHE----------GSTRS 667
            D+  +D +KG SD E+ E+ +T KDE +EH+  +DE ++ QNE E          GS++ 
Sbjct: 1415 DD-DSDLEKGKSDVENLEEDETGKDEESEHTDDKDEASNVQNEDEAISEGTKSSVGSSKG 1473

Query: 668  KKT---------NAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSG 820
            K +           K RRA   + +G+ FEVHF+F  EPH+L+AQ+AQKT++KV++++SG
Sbjct: 1474 KTSFDKSSVELKGKKIRRAFYMVVKGTKFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSG 1533

Query: 821  EMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHED 1000
            ++SQC++V YDPDEKTVIW+N+ KPKRGE+K +   +D  YWA+KASG DFKSFW MH+D
Sbjct: 1534 KVSQCKMVSYDPDEKTVIWDNSKKPKRGESKSEE--EDTSYWAVKASGVDFKSFWEMHDD 1591

Query: 1001 LDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGY 1180
            LDLSRLYSNN+HA+L TYGVEAARAT+IREVK VFDIYGVKIDYRHLSLIAD+MTHTG Y
Sbjct: 1592 LDLSRLYSNNIHAMLTTYGVEAARATIIREVKHVFDIYGVKIDYRHLSLIADHMTHTGSY 1651

Query: 1181 RPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
             PM+RHGSISESLSPFLKMSFETASKFIVEAAS GL D+L+TPSSR+C+GLPVK+
Sbjct: 1652 LPMSRHGSISESLSPFLKMSFETASKFIVEAASHGLTDKLDTPSSRICLGLPVKM 1706


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  442 bits (1136), Expect = e-121
 Identities = 242/474 (51%), Positives = 325/474 (68%), Gaps = 26/474 (5%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+  I+TPI+TCPF  ++SK D  +L+ KVKK++VAD++ESM+V+L   SI   
Sbjct: 1197 QEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNH 1256

Query: 173  KVARTYKLNMKLKETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKNFMXXXX 352
            +V++ YKL +KLK+ +FVSS+D + TL+ VFL+E+E AIE+HL  LSKI+GI+NF     
Sbjct: 1257 QVSQLYKLTVKLKKHDFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSE 1316

Query: 353  XXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXX---AQKR----TDEINYGDESDVDH 511
                D  E+N+    R                      AQKR    TDE++Y D+ D   
Sbjct: 1317 SVDSDETEENASSTRREEEMLDDDDDDEDERTEDLSSDAQKRKQQTTDEMDYDDDEDEAE 1376

Query: 512  CEDELSA---DTKKGTSDGEDHEDMDTSKDEG-AEHSGK-----EDETNDEQNEHEGSTR 664
             E E +A   D K   +D  D+ D + + D G  EH+ K     ED +N + ++ +  T 
Sbjct: 1377 AEAEATAEIEDEKSEQTDEIDNGDEEENGDRGNEEHTSKLQSTEEDISNTKTSKSKTKTT 1436

Query: 665  SKKTNAKPRRAVKH----IF---EGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGE 823
             K+   K RR+ K     +F   EG  FEVHF+F  EPH+LLAQ+AQKTA+KV++K SG+
Sbjct: 1437 VKQKKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGK 1496

Query: 824  MSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHEDL 1003
            + QCR+V+Y+  E TV+W+        + K Q    D+ YWA+KA+G DF +FW M +DL
Sbjct: 1497 IDQCRMVKYEVTENTVMWDEN------QTKQQRQDSDSAYWALKAAGVDFGTFWEMQDDL 1550

Query: 1004 DLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYR 1183
            D++R+Y+NN+ A+LNTYGVEAARA+++REVK VF IYGV+ID+RHLSLIAD+MTHTGGY+
Sbjct: 1551 DVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQ 1610

Query: 1184 PMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            PM+RHGSISESLSPFLKMSFETASKFIVEAA+ GL D LETPSSR+C+GLPVK+
Sbjct: 1611 PMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGLPVKM 1664


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  435 bits (1118), Expect = e-119
 Identities = 235/476 (49%), Positives = 321/476 (67%), Gaps = 28/476 (5%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+  I+TPILTCPF  ++SK D  +L+ KVKK++VAD++ESM+V+L   SI   
Sbjct: 1197 QEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNH 1256

Query: 173  KVARTYKLNMKLKETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKNFMXXXX 352
            +V++ YKL +KLK+ +FVSS+D + TL+ VFL+E+E AIE+HL  LSKI+GI+NF     
Sbjct: 1257 QVSQLYKLTVKLKKHDFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSE 1316

Query: 353  XXXEDAEEDN-SGKGTRXXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDESDVDHCE 517
                D  E+N S                        AQKR    TDE++Y D+ + D  E
Sbjct: 1317 SVDSDETEENASSTRHEEEMLDDEDEDERTEDLSSDAQKRKQQTTDEMDYDDDENEDEAE 1376

Query: 518  DELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKEDETNDEQNEHE--GSTRSKKTNAKPR 691
                 + +K     E  +++D   +E   + G E++ +  Q+  +   +T+S K+  K +
Sbjct: 1377 TTAEIEDEKS----EQTDEIDNGDEEEIGNRGNEEQMSKLQSTEDDISNTKSSKSKTKTK 1432

Query: 692  RAVKH---------------IF---EGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRS 817
              VK                +F   EG  FEVHF+F  EPH+LLAQ+AQKTA+KV++K S
Sbjct: 1433 TTVKQNKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNS 1492

Query: 818  GEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHE 997
            G++ QCR+V+Y+  E TV+W+        + K Q+   D+ YWA+KA+G DF +FW M +
Sbjct: 1493 GKIDQCRMVKYEVTENTVMWDEY------QTKQQSQDSDSAYWALKAAGVDFGTFWEMQD 1546

Query: 998  DLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGG 1177
            DLD++R+Y+NN+ A+LNTYGVEAARA+++REVK VF IYGV+ID+RHLSLIAD+MTHTGG
Sbjct: 1547 DLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGG 1606

Query: 1178 YRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            Y+PM+RHGSISESLSPFLKMSFETASKFIVEAA+ GL D LETPSSR+C+GLPVK+
Sbjct: 1607 YQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGLPVKM 1662


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  432 bits (1110), Expect = e-118
 Identities = 230/474 (48%), Positives = 314/474 (66%), Gaps = 26/474 (5%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQLSINRRKVA 181
            QEILMTA+  IRTP+LTCPF + +SK + +++++ +KK+++ADL+ESM V +S +  KV 
Sbjct: 1145 QEILMTASEVIRTPMLTCPFLQRQSKPNALSVISNLKKITIADLIESMDVSISFHP-KVG 1203

Query: 182  RTYKLNMKLKETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKNFMXXXXXXX 361
            R YKL M+LK+TEFVS +D  KTL+  FLKE+E A+ENH++FL K++ I +F        
Sbjct: 1204 RIYKLRMRLKDTEFVSLEDTYKTLKTSFLKELEDALENHVVFLKKVAVINDFASHSRFEA 1263

Query: 362  -EDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXX-------AQKRTDEINYGDESDVDHCE 517
              + EED +  G +                           Q+  D+++Y D SD +  E
Sbjct: 1264 LSEGEEDKASDGAQEAEEEGDDDGGDSDAGEDLDSDVQKRRQQARDDMDYEDASDSEQRE 1323

Query: 518  DELSADTKKGTSDGEDHEDMDTSK--DEGAEHSGKEDETNDEQ---------------NE 646
            +E   D      D +D E+    K  D+  ++  +  E N  +               +E
Sbjct: 1324 EEEDLDKANAEEDDDDDENEWNEKCDDDHDDYDQRSSEKNMVEKPILKGRKKSVAAITSE 1383

Query: 647  HEGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSG-E 823
                +    T  +  RA+    EG S EVHFKFT+EPHVLLAQ+ QKTA+KV++K++G +
Sbjct: 1384 KIDLSTMPSTGKRENRAIYMEIEGLSLEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGK 1443

Query: 824  MSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHEDL 1003
            ++QC+LVQYDPDEKTVIW++  K ++     +   DDA YWA+KASG+D +SFW M + L
Sbjct: 1444 LNQCKLVQYDPDEKTVIWDDDKKKEKATKNGRKADDDAAYWAVKASGSDVESFWEMSDYL 1503

Query: 1004 DLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYR 1183
            DL+RLY NN+H++L TYGVEAA AT+IRE+K VFDIYGVKIDYRHLSLI D+M H GGYR
Sbjct: 1504 DLNRLYCNNIHSMLKTYGVEAASATIIREMKNVFDIYGVKIDYRHLSLIGDHMAHAGGYR 1563

Query: 1184 PMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            PM+RHGSI +S+SPFLKMSFETASKFIVEAA +GL D+LE+PSSR+C+GLPV+V
Sbjct: 1564 PMSRHGSIPDSVSPFLKMSFETASKFIVEAAIYGLRDDLESPSSRICLGLPVRV 1617


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  372 bits (955), Expect = e-100
 Identities = 221/477 (46%), Positives = 306/477 (64%), Gaps = 29/477 (6%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTAA +I+TPI+TCP    RSK D   L  K+KKV+VAD+ ESM+V +   ++   
Sbjct: 1188 QEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDH 1247

Query: 173  KVARTYKLNMKLKETEF------VSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            +    YKL MKL E         +S +D ++TLE VF++E+E AI+NHL+ LSKISGIKN
Sbjct: 1248 QTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKN 1307

Query: 335  FMXXXXXXX-EDAEEDNSGKGT---RXXXXXXXXXXXXXXXXXXXAQKR----TDEINYG 490
            F+        ++ +ED SG G                        AQKR    +DE++YG
Sbjct: 1308 FLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYG 1367

Query: 491  DESDVDHCEDELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKEDETNDEQNEHEGSTRSK 670
            D S+ +  E E SA   +     ED  ++  +++ G   S  +DE +   ++ + S   K
Sbjct: 1368 D-SEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGI--SDPKDEDSKVPSKSKSSKNKK 1424

Query: 671  -KTNAKPR---RAVKHIFE--------GSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKR 814
             KT AK +   RA+K  F+        G+ FEVHF+FT EPH+LLAQIAQK A KV+++ 
Sbjct: 1425 AKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRS 1484

Query: 815  SGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMH 994
            SG++  C+++  + D+  VI+     PK+ EN P  G +     A++ +G DF +FW M 
Sbjct: 1485 SGKIDLCQVIDCNKDQ--VIYYGR-DPKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQ 1539

Query: 995  EDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTG 1174
            ++LD+  +YSNNVHA+LNT+GVEAARAT+I+EV  VF+ YGVK++ RHLSLIAD+MTH+G
Sbjct: 1540 DELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSG 1599

Query: 1175 GYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            GYRPMNRHG I+ES+SPF KM+FETASKFIVEAAS G+ D LE+ S+R+C+GLPVK+
Sbjct: 1600 GYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKM 1656


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  372 bits (955), Expect = e-100
 Identities = 221/477 (46%), Positives = 306/477 (64%), Gaps = 29/477 (6%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTAA +I+TPI+TCP    RSK D   L  K+KKV+VAD+ ESM+V +   ++   
Sbjct: 1259 QEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDH 1318

Query: 173  KVARTYKLNMKLKETEF------VSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            +    YKL MKL E         +S +D ++TLE VF++E+E AI+NHL+ LSKISGIKN
Sbjct: 1319 QTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKN 1378

Query: 335  FMXXXXXXX-EDAEEDNSGKGT---RXXXXXXXXXXXXXXXXXXXAQKR----TDEINYG 490
            F+        ++ +ED SG G                        AQKR    +DE++YG
Sbjct: 1379 FLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYG 1438

Query: 491  DESDVDHCEDELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKEDETNDEQNEHEGSTRSK 670
            D S+ +  E E SA   +     ED  ++  +++ G   S  +DE +   ++ + S   K
Sbjct: 1439 D-SEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGI--SDPKDEDSKVPSKSKSSKNKK 1495

Query: 671  -KTNAKPR---RAVKHIFE--------GSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKR 814
             KT AK +   RA+K  F+        G+ FEVHF+FT EPH+LLAQIAQK A KV+++ 
Sbjct: 1496 AKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRS 1555

Query: 815  SGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMH 994
            SG++  C+++  + D+  VI+     PK+ EN P  G +     A++ +G DF +FW M 
Sbjct: 1556 SGKIDLCQVIDCNKDQ--VIYYGR-DPKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQ 1610

Query: 995  EDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTG 1174
            ++LD+  +YSNNVHA+LNT+GVEAARAT+I+EV  VF+ YGVK++ RHLSLIAD+MTH+G
Sbjct: 1611 DELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSG 1670

Query: 1175 GYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            GYRPMNRHG I+ES+SPF KM+FETASKFIVEAAS G+ D LE+ S+R+C+GLPVK+
Sbjct: 1671 GYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKM 1727


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  347 bits (889), Expect = 9e-93
 Identities = 200/484 (41%), Positives = 285/484 (58%), Gaps = 36/484 (7%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +IRTP++TCP  + ++K D + L  K+KK++VAD+LESM+V +   +++  
Sbjct: 908  QEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNG 967

Query: 173  KVARTYKLNM------KLKETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
             +   YKL M      K  E   ++ KD +  L+ VFL+E+E AI+NHL+ LSKISGIK 
Sbjct: 968  DICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKK 1027

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXA-----------QKRTDEI 481
            FM        +  +++  +G                     A           Q+ TDE+
Sbjct: 1028 FMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEM 1087

Query: 482  NYGDESDVDHCEDELSADTKKGTSDGEDHE--------DMDTSKDEGAEHS-GKEDETND 634
            +Y D+S+V+  E    A  +      ED            D  KDE ++ S   E+ +N 
Sbjct: 1088 DYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNP 1147

Query: 635  EQNEHEGSTRSKKTNAKPR-------RAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTA 793
            +  E +  +  K+   K +       RA+ +   G  FEVHFK   EPH+LLAQIA+KTA
Sbjct: 1148 KSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTA 1207

Query: 794  QKVFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDF 973
            +KV+++  G++ QCR+   D  E  V +      KR     ++ +D     A+  +G DF
Sbjct: 1208 KKVYIQSFGKIDQCRVT--DCSENQVFYYGEDPKKR-----KSPSDKEKIQALHTTGVDF 1260

Query: 974  KSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 1153
             +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIA
Sbjct: 1261 GAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIA 1320

Query: 1154 DYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGL 1333
            D+MTH+G YRPM+R G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSR+C+GL
Sbjct: 1321 DFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGL 1380

Query: 1334 PVKV 1345
            PVK+
Sbjct: 1381 PVKM 1384


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  347 bits (889), Expect = 9e-93
 Identities = 200/484 (41%), Positives = 285/484 (58%), Gaps = 36/484 (7%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +IRTP++TCP  + ++K D + L  K+KK++VAD+LESM+V +   +++  
Sbjct: 911  QEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNG 970

Query: 173  KVARTYKLNM------KLKETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
             +   YKL M      K  E   ++ KD +  L+ VFL+E+E AI+NHL+ LSKISGIK 
Sbjct: 971  DICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKK 1030

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXA-----------QKRTDEI 481
            FM        +  +++  +G                     A           Q+ TDE+
Sbjct: 1031 FMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEM 1090

Query: 482  NYGDESDVDHCEDELSADTKKGTSDGEDHE--------DMDTSKDEGAEHS-GKEDETND 634
            +Y D+S+V+  E    A  +      ED            D  KDE ++ S   E+ +N 
Sbjct: 1091 DYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNP 1150

Query: 635  EQNEHEGSTRSKKTNAKPR-------RAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTA 793
            +  E +  +  K+   K +       RA+ +   G  FEVHFK   EPH+LLAQIA+KTA
Sbjct: 1151 KSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTA 1210

Query: 794  QKVFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDF 973
            +KV+++  G++ QCR+   D  E  V +      KR     ++ +D     A+  +G DF
Sbjct: 1211 KKVYIQSFGKIDQCRVT--DCSENQVFYYGEDPKKR-----KSPSDKEKIQALHTTGVDF 1263

Query: 974  KSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 1153
             +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIA
Sbjct: 1264 GAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIA 1323

Query: 1154 DYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGL 1333
            D+MTH+G YRPM+R G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSR+C+GL
Sbjct: 1324 DFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGL 1383

Query: 1334 PVKV 1345
            PVK+
Sbjct: 1384 PVKM 1387


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  347 bits (889), Expect = 9e-93
 Identities = 200/484 (41%), Positives = 285/484 (58%), Gaps = 36/484 (7%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +IRTP++TCP  + ++K D + L  K+KK++VAD+LESM+V +   +++  
Sbjct: 1200 QEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNG 1259

Query: 173  KVARTYKLNM------KLKETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
             +   YKL M      K  E   ++ KD +  L+ VFL+E+E AI+NHL+ LSKISGIK 
Sbjct: 1260 DICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKK 1319

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXA-----------QKRTDEI 481
            FM        +  +++  +G                     A           Q+ TDE+
Sbjct: 1320 FMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEM 1379

Query: 482  NYGDESDVDHCEDELSADTKKGTSDGEDHE--------DMDTSKDEGAEHS-GKEDETND 634
            +Y D+S+V+  E    A  +      ED            D  KDE ++ S   E+ +N 
Sbjct: 1380 DYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNP 1439

Query: 635  EQNEHEGSTRSKKTNAKPR-------RAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTA 793
            +  E +  +  K+   K +       RA+ +   G  FEVHFK   EPH+LLAQIA+KTA
Sbjct: 1440 KSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTA 1499

Query: 794  QKVFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDF 973
            +KV+++  G++ QCR+   D  E  V +      KR     ++ +D     A+  +G DF
Sbjct: 1500 KKVYIQSFGKIDQCRVT--DCSENQVFYYGEDPKKR-----KSPSDKEKIQALHTTGVDF 1552

Query: 974  KSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 1153
             +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIA
Sbjct: 1553 GAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIA 1612

Query: 1154 DYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGL 1333
            D+MTH+G YRPM+R G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSR+C+GL
Sbjct: 1613 DFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGL 1672

Query: 1334 PVKV 1345
            PVK+
Sbjct: 1673 PVKM 1676


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  342 bits (876), Expect = 3e-91
 Identities = 198/482 (41%), Positives = 284/482 (58%), Gaps = 34/482 (7%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQLS---INRR 172
            QEILMTA+ +IRTP++TCP  + ++K D + L  K+KK++VAD+LESM+V ++   ++  
Sbjct: 1203 QEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNG 1262

Query: 173  KVARTYKLNMKLK------ETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
             +   YKL M L       E   ++ KD +  L+ VFL+E+E AI+NHL+ LSKISGIK 
Sbjct: 1263 DICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKK 1322

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXAQKRTDEINYGDESDVDHC 514
            FM        +  +++  +G                        R+ E    D+ D D  
Sbjct: 1323 FMPDSQRNASNEMDEDVSEG------------------------RSRETKNDDDDDDDDA 1358

Query: 515  EDELSADTKKGTSDGEDHEDMDTSKDEGA--------EHSGKEDETNDE---QNEHEGST 661
            +DE  A+   G S      ++D S+DE            +GK++ +      +N     +
Sbjct: 1359 DDEERAEDL-GASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKS 1417

Query: 662  RSKKTNAKPRR--------------AVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQK 799
            R +KT ++P+R              A+ +   G  FEVHFK   EPH+LLAQIA+KTA+K
Sbjct: 1418 REEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKK 1477

Query: 800  VFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKS 979
            V+++  G++ QCR+   D  E  V +      KR     ++ +D     A+  +G DF +
Sbjct: 1478 VYIQSFGKIDQCRVT--DCSENQVFYYGEDPKKR-----KSPSDKEKIQALHTTGVDFGA 1530

Query: 980  FWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADY 1159
            FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+LIAD+
Sbjct: 1531 FWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADF 1590

Query: 1160 MTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPV 1339
            MTH+G YRPM+R G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSR+C+GLPV
Sbjct: 1591 MTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPV 1650

Query: 1340 KV 1345
            K+
Sbjct: 1651 KM 1652


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  341 bits (874), Expect = 5e-91
 Identities = 207/490 (42%), Positives = 283/490 (57%), Gaps = 42/490 (8%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +I+TPI+TCP  E R+  D   L  K++KV+VAD++ESM+V +   +I   
Sbjct: 1189 QEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDG 1248

Query: 173  KVARTYKLNMKLKETEF------VSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
             V R YKL MKL           +S +D ++TLE VFL+E+E AI+NH+  LS+ISGIK+
Sbjct: 1249 GVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKD 1308

Query: 335  FMXXXXXXXE-DAEEDNSGKGTRXXXXXXXXXXXXXXXXXXX---AQKR----TDEINYG 490
            F+         +A+ED +G  +                       AQKR    TDE++Y 
Sbjct: 1309 FLPESRSRASGEADEDVAGDMSHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYD 1368

Query: 491  D-------ESDVDHCEDELSADTKKGTSDGEDHEDMDTSKDEGAEHS----------GKE 619
            D       E +    E+E   +++    D E     D   D  A  +           K+
Sbjct: 1369 DGFEEELNEGESTASEEESGFESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKK 1428

Query: 620  DETNDEQNEHEGSTRSKKTNAKPRRAVKHIFEGS--------SFEVHFKFTTEPHVLLAQ 775
                   +  +   + KK  AK +  +   F+ +         FEVHFKFT EPH+LLA+
Sbjct: 1429 KAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAE 1488

Query: 776  IAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMK 955
            IAQKTA+KV+++  G++ QCR+   D  E  VI+      +R + KP          A+ 
Sbjct: 1489 IAQKTAKKVYIQNPGKIEQCRVT--DCKESQVIYYGKDPKERVDLKPDVKEKVP---ALH 1543

Query: 956  ASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYR 1135
            A+G DF +FW M + LD+  +YSNN+HA+L TYGVEAAR T+IRE+  VF  YG+ +  R
Sbjct: 1544 ATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNR 1603

Query: 1136 HLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSS 1315
            HLSLIAD+MTHTGGYRPM+R G I+ES+SPF KMSFETASKFIVEAA  G  D LETPS+
Sbjct: 1604 HLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSA 1663

Query: 1316 RVCMGLPVKV 1345
            R+C+GLPVK+
Sbjct: 1664 RICLGLPVKM 1673


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  337 bits (865), Expect = 5e-90
 Identities = 199/479 (41%), Positives = 281/479 (58%), Gaps = 31/479 (6%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILM AA +I+TP +TCP    +S +D + L  K+KK++VAD+++SMKV +   ++   
Sbjct: 1166 QEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGG 1225

Query: 173  KVARTYKLNMKL-KETEFVSSKDI-----KKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            +V   YKL MKL K  ++    DI     ++TL   F++E+E AI+NH+  LSKISGIK 
Sbjct: 1226 QVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKK 1285

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXX-----------AQKR---- 469
            F         ++ ED    G+                               AQKR    
Sbjct: 1286 FKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQG 1345

Query: 470  TDEINYGDESDVDHCEDELSADTKKGTSDGED-------HEDMDTSKDEGAEHSGKEDET 628
            TDE++Y D  + +  + ELS + + G  DG D       +   D +  EG E   K    
Sbjct: 1346 TDEVDYEDGPEEETHDGELSEEIE-GDEDGSDVDANENYNNVTDANNSEGLEKPSKSKTI 1404

Query: 629  NDEQNEHEGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFL 808
            +++QN      +S+ T  K  RA+    +G  FE+HF+FT EPH+LL QIAQ+TA+KV +
Sbjct: 1405 DEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCI 1464

Query: 809  KRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWN 988
            +  G++ +C+ +     E  VI+      KR E    + ++     A++ SG  FK+FW 
Sbjct: 1465 QNFGKVGECKAITCK--ESGVIYYGKDGRKRIEI---SASEKEQIPALQTSGVHFKTFWE 1519

Query: 989  MHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTH 1168
            + +DLD+  +YSNNVHA+LN YGVEAAR T+IREV+ VF  YG+ ++ RHL+LIAD+MTH
Sbjct: 1520 LEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTH 1579

Query: 1169 TGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            TG YRPMNR GSI++S SPF+KM FETA  FIVEAA  G  D LETPS+R+C+GLPVK+
Sbjct: 1580 TGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKM 1638


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  336 bits (862), Expect = 1e-89
 Identities = 204/494 (41%), Positives = 286/494 (57%), Gaps = 46/494 (9%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMK---VQLSINRR 172
            QEILMTAA +I+TP++TCP  + RSK +   L  K+KK++VAD++ESMK   V   I   
Sbjct: 1110 QEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFFIQDG 1169

Query: 173  KVARTYKLNMKLKETEFV------SSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            +  R YKL M L   E +      SS+D ++ LE VF++E+E AI+NH++ LSKISGIKN
Sbjct: 1170 QTCRIYKLEMTLHVPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKN 1229

Query: 335  F---------------MXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXAQKR 469
            F               +       E+ ++DN G                       A   
Sbjct: 1230 FTPDSQPKASNETDENLPEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQA--- 1286

Query: 470  TDEINY---------------GDESDVDHCED--ELSADTKKGTSDGEDHEDMDTSKDEG 598
            TDE++Y               GDES++D  E+  E+  D + G  D  D       ++ G
Sbjct: 1287 TDEMDYEDGCDDEVREADLSDGDESEIDEEENEVEIGKDGEIGVIDANDEMPGSPLEEAG 1346

Query: 599  --AEHSGKEDET-NDEQNEHEGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFT-TEPHVL 766
              A+   KE +T +  Q   +   R++    +  RA+    +G  FEVHF+F   EPH+L
Sbjct: 1347 DLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHFEVHFRFADNEPHIL 1406

Query: 767  LAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYW 946
            L+QIAQKTAQKV+++RSG+++ C+ +  D ++           K  ENK    + +    
Sbjct: 1407 LSQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCF------GKDPENKQSFSSKEKKEM 1460

Query: 947  -AMKASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVK 1123
             A++ +G DF +FW + + LD+  +YSNN+HA+LNTYGVEAAR T+IRE+  VF  YG+ 
Sbjct: 1461 PALQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSYGIS 1520

Query: 1124 IDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELE 1303
            ++ RHL+LIAD+MTH GGYRP+NR G I ES+SPF KM+FETASKFIVEAA  G  D LE
Sbjct: 1521 VNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVDRLE 1580

Query: 1304 TPSSRVCMGLPVKV 1345
            TPS+R+C+GLPV V
Sbjct: 1581 TPSARICLGLPVNV 1594


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  331 bits (849), Expect = 4e-88
 Identities = 212/503 (42%), Positives = 290/503 (57%), Gaps = 55/503 (10%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +I+TPI+TCP  E R+K D   L  K+KKV+VAD++ESM+V +   ++   
Sbjct: 622  QEILMTASADIKTPIMTCPLHEGRTKEDAERLSDKLKKVTVADIVESMEVSVMPFAVQND 681

Query: 173  KVARTYKLNMKL------KETEFVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
             + R YKL MKL       +   +S ++ ++TLE +F++E+E AI+N+L+ LSKISGIKN
Sbjct: 682  DICRIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNYLVLLSKISGIKN 741

Query: 335  FMXXXXXXXE-DAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXA---QKR----TDEINYG 490
            F+         +AEED SG  +R                       QKR    TDE++Y 
Sbjct: 742  FLKESHSGTPIEAEEDVSGNISREGENDDDSDDEEGEEADDLGLDVQKRKQQVTDEMDYD 801

Query: 491  DESDVDHCEDE-----------LSADTKKGTSDGE----DHEDMDTSKDEGAEHSG---- 613
            D S+    EDE             +DT+    + E    D  D D+   E   H G    
Sbjct: 802  DGSEGVLNEDEGDLSGSQAPSGSESDTEPADKESEISNTDMVDYDSEYFEKPTHLGNYSK 861

Query: 614  -----KEDETNDEQNEHEG--STRSKKTNAKPRRA----VKHIFE--------GSSFEVH 736
                 K  E++ +   H    ST  KK  AK ++     VK  F+        G  FE+H
Sbjct: 862  PKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIH 921

Query: 737  FKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKP 916
             KFT EPH+LLA+IAQKTA+KV ++  G++ +C++   D  E  VI+      +R + +P
Sbjct: 922  LKFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVT--DCKENQVIYYGKDPKRRIDIEP 979

Query: 917  QTGADDALYWAMKASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVK 1096
                +     A+   G DF +FW M + LD+  +YSN++H +L  YGVEAAR T+IRE+K
Sbjct: 980  ---GEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIK 1036

Query: 1097 QVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAA 1276
             VF+ YG+ ++ RHLSLIADYMTHTG YRPM+R G ISES+SP  KMSFETASKFIVEAA
Sbjct: 1037 HVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAA 1096

Query: 1277 SFGLADELETPSSRVCMGLPVKV 1345
              G  D LE PS+RVC+GLPVK+
Sbjct: 1097 LHGEVDNLEAPSARVCLGLPVKM 1119


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  328 bits (840), Expect = 4e-87
 Identities = 194/471 (41%), Positives = 280/471 (59%), Gaps = 23/471 (4%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEI+M AA +I+TP +TCP    +S  + + L  K+KK++VAD+++SMKV +   S+   
Sbjct: 1160 QEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPVSVLGG 1219

Query: 173  KVARTYKLNMKL-KETEFVSSKDI-----KKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            +V   YKL MKL K  ++    DI     + TL   F++E+E AIENH+  LSKISGIK 
Sbjct: 1220 QVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKISGIKK 1279

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXX----------AQKR----T 472
            F         ++ ED  G G+                              AQKR    T
Sbjct: 1280 FKTDPQSH-SNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRKRQGT 1338

Query: 473  DEINYGDESDVDHCEDELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKEDETNDEQNEHE 652
            DE++Y D  + +  +  LS + +    + +D+  +D S  EG +   +     ++ +   
Sbjct: 1339 DEVDYEDGPEEETHDGVLSEEIENDEDNVDDNMTLDASDSEGLDELSESKSIFEKDSLKR 1398

Query: 653  GSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQ 832
               +S+ T  K  RAV    +G  F++HFKFT EP +LLA+IA ++A+KV ++ SG + +
Sbjct: 1399 EKKKSRPTTRKYDRAVFVKAKGMHFQIHFKFTGEPDILLAEIALRSAKKVCIQNSGRVGE 1458

Query: 833  CRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHEDLDLS 1012
            C+ V     E  V++      KR ++ P +  +     A++ SG  FK+FW + +DLD+ 
Sbjct: 1459 CKAVTCK--ESGVMYYGEDSRKR-DDIPASVKEKIP--ALQTSGVHFKTFWELQDDLDVR 1513

Query: 1013 RLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMN 1192
             +YSNNVHA+LN YGVEAAR T+IREV+ VF  YG+ ++ RHL+LIAD+MTH+GGYRPMN
Sbjct: 1514 YIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGGYRPMN 1573

Query: 1193 RHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            R+GSI++  SPF+KM FETASKFIVEAA  G  D LETPSSR+C+GLPVK+
Sbjct: 1574 RNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGLPVKM 1624


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  325 bits (833), Expect = 3e-86
 Identities = 195/480 (40%), Positives = 280/480 (58%), Gaps = 32/480 (6%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEIL  A+ +I+TP +TCP    +S  D + L  K+KK++VAD++ESMKV +   ++   
Sbjct: 1163 QEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDG 1222

Query: 173  KVARTYKLNMKLKETEF------VSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            ++   YKL MKL + +       V+ KD ++TL   F++ +E AIEN++  L+KISGI N
Sbjct: 1223 RICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGITN 1282

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXX---AQKR----TDEINYGD 493
            F         +  ED+   G                        AQK      D+++Y D
Sbjct: 1283 FKTDAQPNSSNGAEDDPSNGKTNDDDDDDGDADDTEGAEDLGLDAQKSKRQVVDDVDYDD 1342

Query: 494  ESDVDHCEDELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKEDETND--EQNEH------ 649
              + +  ED   ++  +G  D +D+E +    D   +  GK DE     E NE+      
Sbjct: 1343 GPEEETLEDGELSEDLEGVEDAKDNEYVKDDGDGKDDEDGKGDEDGSDIEVNENDKKVTL 1402

Query: 650  --------EGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVF 805
                    E +++S+  + K  R V   FE   FE+HFKFT EPH+LLAQIAQKTA+KV 
Sbjct: 1403 GANYSQGPEENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTGEPHILLAQIAQKTAEKVC 1462

Query: 806  LKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFW 985
            ++  G++ QC+ +     E  VI+      KR E  P +  +     A++ SG  FKSFW
Sbjct: 1463 IQNFGKVGQCKAITCK--ESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFW 1517

Query: 986  NMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMT 1165
             M +DL++  +YSNNVHA+L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL LIAD+MT
Sbjct: 1518 EMQDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMT 1577

Query: 1166 HTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            H+G YRPM+R GSI++S SPFLK+ FETAS FIVEAA  G  D L++PS+R+C+GLPVK+
Sbjct: 1578 HSGCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKM 1637


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  325 bits (833), Expect = 3e-86
 Identities = 191/476 (40%), Positives = 280/476 (58%), Gaps = 28/476 (5%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +I+TPI+TCP  E  S      L  K+KK++VAD++ESM V +   S  +R
Sbjct: 1167 QEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKR 1226

Query: 173  KVARTYKLNMKLKETE------FVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            ++   YKL +     E       +S +D++ TLE VFL+E+E  IE  ++ LSKI+GIKN
Sbjct: 1227 EICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKN 1286

Query: 335  FM-XXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXAQKR-----TDEINYGDE 496
            F+         + +E +S +                        K+      DE++Y D+
Sbjct: 1287 FVPDSQSKGSSEGDEVSSSRQKENDDDDDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDD 1346

Query: 497  SDVDHCEDELSADTKKGTSDGEDHE----DM-DTSKDEGAEH--------SGKEDETNDE 637
            S+ D    E S   +     G++ E    DM +  KD  +E+             E   E
Sbjct: 1347 SEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTE 1406

Query: 638  QNEHEGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRS 817
             ++ +   +S+    +  R++    + + FEVHFKFT EPH LL+QI Q+ AQKV ++RS
Sbjct: 1407 TSKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRS 1466

Query: 818  GEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHE 997
            G++ QC+  Q    E  VI++     +R   KP+   +     A++ SG DFK+ W M +
Sbjct: 1467 GKIIQCQ--QITCKEGQVIYHGNNLKERKNLKPE---EKEKIPALQTSGVDFKTLWEMQD 1521

Query: 998  DLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGG 1177
            +LD+  +YSN++HA+L TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+ADYMTH+GG
Sbjct: 1522 ELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGG 1581

Query: 1178 YRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            YRPM+R G IS+S+SPF +M+FETA KFIV+AA  G  D LETPSSR+C+GLPVK+
Sbjct: 1582 YRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKM 1637


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  323 bits (829), Expect = 8e-86
 Identities = 188/475 (39%), Positives = 278/475 (58%), Gaps = 27/475 (5%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +I+TPI+TCP  E  S      L  K+KK++VAD++ESM V +   S  +R
Sbjct: 1170 QEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKR 1229

Query: 173  KVARTYKLNMKLKETE------FVSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            ++   YKL +     E       +S +D++ TLE VFL+E+E  IE  ++ LSKI+GIK 
Sbjct: 1230 EICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKX 1289

Query: 335  FMXXXXXXXE-DAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDES 499
            F+         + +E +S +                       +K+     DE++Y D+S
Sbjct: 1290 FVPDSQSKGSSEGDEVSSSRQEEMDDDDEGNDLDVAEDLGSDXEKQKLQANDEMDYEDDS 1349

Query: 500  DVDHCEDELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKED-------------ETNDEQ 640
            + D    E S   +     G++ E  +    E  + S  E+             E   E 
Sbjct: 1350 EDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTET 1409

Query: 641  NEHEGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSG 820
            ++ +   +S+    +  R++    + + FEVHFKFT EPH LL+QI Q+ AQKV ++RSG
Sbjct: 1410 SKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSG 1469

Query: 821  EMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHED 1000
            ++ QC+  Q    E  VI++     +R   KP+   +     A++ SG DFK+ W M ++
Sbjct: 1470 KIIQCQ--QITCKEGQVIYHGNNLKERKNLKPE---EKEKIPALQTSGVDFKTLWEMQDE 1524

Query: 1001 LDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGY 1180
            LD+  +YSN++HA+L TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+ADYMTH+GGY
Sbjct: 1525 LDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGY 1584

Query: 1181 RPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGLPVKV 1345
            RPM+R G IS+S+SPF +M+FETA KFIV+AA  G  D LETPSSR+C+GLPVK+
Sbjct: 1585 RPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKM 1639


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  320 bits (819), Expect = 1e-84
 Identities = 195/486 (40%), Positives = 280/486 (57%), Gaps = 38/486 (7%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEIL  A+ +I+TP +TCP    +S  D + L  K+KK++VAD++ESMKV +   ++   
Sbjct: 1167 QEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQDG 1226

Query: 173  KVARTYKLNMKLKETEF------VSSKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIKN 334
            ++   YKL MKL + +       V+ KD ++TL   F++ +E AIEN++  L+KISGI N
Sbjct: 1227 RICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGITN 1286

Query: 335  FMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXX-----AQKR----TDEINY 487
            F         +  ED+   G                          AQK      D+++Y
Sbjct: 1287 FKTDAQPNSSNGAEDDPSNGKTNDDDDDDDDGDADDTEGAEDLGLDAQKSKRQVVDDVDY 1346

Query: 488  GDESDVDHCEDELSADTKKGTSDGEDHEDMDTSKDEGAEHSGKEDETND--EQNEH---- 649
             D  + +  ED   ++  +G  D +D+E +    D   +  GK DE     E NE+    
Sbjct: 1347 DDGPEEETLEDGELSEDLEGVEDAKDNEHVKDDGDGKDDEDGKGDEDGSDIEVNENDKKV 1406

Query: 650  ----------EGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQ----IAQK 787
                      E +++S+  + K  R V   FE   FE+HFKFT EPH+LLAQ    IAQK
Sbjct: 1407 TLGVNYSQGPEENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTDEPHILLAQLLSTIAQK 1466

Query: 788  TAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNNTMKPKRGENKPQTGADDALYWAMKASGT 967
            TA+KV ++  G++ QC+ +     E  VI+      KR E  P +  +     A++ SG 
Sbjct: 1467 TAEKVCIQNFGKVGQCKAITCK--ESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGI 1521

Query: 968  DFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSL 1147
             FKSFW M +DL++  +YSNNVHA+L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL L
Sbjct: 1522 HFKSFWEMQDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLML 1581

Query: 1148 IADYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCM 1327
            IAD+MTH+G YRPM+R GSI++S SPFLK+ FETAS FIVEAA  G  D L++PS+R+C+
Sbjct: 1582 IADFMTHSGCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICL 1641

Query: 1328 GLPVKV 1345
            GLPVK+
Sbjct: 1642 GLPVKM 1647


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  318 bits (815), Expect = 3e-84
 Identities = 192/484 (39%), Positives = 273/484 (56%), Gaps = 36/484 (7%)
 Frame = +2

Query: 2    QEILMTAATNIRTPILTCPFSEFRSKRDVVALVTKVKKVSVADLLESMKVQL---SINRR 172
            QEILMTA+ +I+TP++TCP    +++ D  +L  ++K+++VAD++ESMKV +   +    
Sbjct: 1183 QEILMTASNDIKTPVMTCPLRMGKAE-DAKSLAGRLKRITVADIIESMKVNIKPFTHQDH 1241

Query: 173  KVARTYKLNMKLKETEFVS--SKDIKKTLEGVFLKEMEVAIENHLIFLSKISGIK----- 331
            +  R Y+L M     E +S  S+D ++ L+  F++ +E AI+NHL+ LSKISGIK     
Sbjct: 1242 QTCRVYELEMTFFIPEHLSKFSEDWEELLKVKFVRALEDAIQNHLVLLSKISGIKDIKAD 1301

Query: 332  ---------------NFMXXXXXXXEDAEEDNSGKGTRXXXXXXXXXXXXXXXXXXXAQK 466
                           N         +D   D+SG+G                        
Sbjct: 1302 SLPKASNETDEDISFNISQHEGEGGDDDNVDDSGEGVEDFGLDAQKQKRQGTDEMEYDDD 1361

Query: 467  RTDEINYGDESD-----VDHCE--DELSADTKKGTSDGED--HEDMDTSKDEGAEHSGKE 619
              DE N G +SD     +D+ E   E+  D   G SD  D   E   T         GK+
Sbjct: 1362 WEDEFNEGRQSDEFENEIDNGELDVEIDKDGVTGISDANDKMQESCSTGGISKPHSKGKK 1421

Query: 620  DETNDEQNEHEGSTRSKKTNAKPRRAVKHIFEGSSFEVHFKFTTEPHVLLAQIAQKTAQK 799
             ++ D+  +    T +K    +  RA     +G  FE+HFKFT EPH+LL QIAQKTA+ 
Sbjct: 1422 TKSRDKIKK---KTSAKLVRKEYDRATFVSAKGFHFEIHFKFTNEPHILLDQIAQKTARN 1478

Query: 800  VFLKRSGEMSQCRLVQYDPDEKTVI--WNNTMKPKRGENKPQTGADDALYWAMKASGTDF 973
            V++K SG +  C+ +    +E  V   WN+      GE  P    ++    A++ +G DF
Sbjct: 1479 VYVKSSGNILDCQDIDIYGNEDQVFCCWNDPRNKLSGEKNPSE--EEKKMRALQTAGVDF 1536

Query: 974  KSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 1153
             + W + +DLD++ +YSNN+HA+LNTYGVEAAR T+I+E+  VF +YG+ ++ RHL LIA
Sbjct: 1537 ATLWKLQDDLDVNYIYSNNIHAMLNTYGVEAARETIIKEISNVFKVYGISVNIRHLLLIA 1596

Query: 1154 DYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELETPSSRVCMGL 1333
            DYMT +G YRPMNR G I+ES SP  KMSFETASKFI EAA  G  D+LETPS+R+C+GL
Sbjct: 1597 DYMTRSGSYRPMNRFGGIAESTSPMNKMSFETASKFIQEAAYHGEKDDLETPSARICLGL 1656

Query: 1334 PVKV 1345
            PVKV
Sbjct: 1657 PVKV 1660