BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00014247
         (653 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   362   7e-98
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   322   5e-86
gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   290   4e-76
gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlise...   276   4e-72
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   265   7e-69
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   265   7e-69
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   265   7e-69
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   265   7e-69
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   265   9e-69
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...   265   9e-69
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   264   2e-68
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   263   3e-68
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   263   3e-68
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   263   3e-68
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   263   3e-68
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   263   3e-68
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   263   3e-68
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   263   3e-68
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   263   4e-68
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   263   5e-68

>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  362 bits (928), Expect = 7e-98
 Identities = 167/217 (76%), Positives = 191/217 (88%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYKKLE S+YSFY+ETP+DQWVRTTDFTPSCIGQSSGLCLQL      L +F+ +F++
Sbjct: 179 PRIYKKLEYSVYSFYRETPDDQWVRTTDFTPSCIGQSSGLCLQLPRHVK-LPDFKNNFMH 237

Query: 473 YSVRETPFYIESGTPFCANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATF 294
           Y+V E PF + +G PFC NLPLVPIVQPPRGLELPY++LFK+CSLVQTGCLPGMKLD  F
Sbjct: 238 YTVSEEPFQLVNGAPFCGNLPLVPIVQPPRGLELPYKLLFKVCSLVQTGCLPGMKLDTEF 297

Query: 293 FRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDDGL 114
           F+C+NP+R  I+YIEHAL+KLY+ KECCYDPVAWL EQYRKY+T EE PKPPTI LDDGL
Sbjct: 298 FQCLNPRRYAIRYIEHALDKLYYIKECCYDPVAWLREQYRKYQTFEELPKPPTISLDDGL 357

Query: 113 VYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           VY+HRVQVTPTRVYF+GPEVNMSNRVLR FS +IDNF
Sbjct: 358 VYIHRVQVTPTRVYFAGPEVNMSNRVLRQFSAHIDNF 394


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  322 bits (826), Expect = 5e-86
 Identities = 152/217 (70%), Positives = 175/217 (80%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYKKL  S+YS++  T +DQWVRTTDFT S IGQSS LCLQL Y    L NF  +F+Y
Sbjct: 176 PRIYKKLSGSVYSYFMVTQDDQWVRTTDFTQSLIGQSSSLCLQLPYGMR-LPNFRDNFLY 234

Query: 473 YSVRETPFYIESGTPFCANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATF 294
           Y   ETPF +E+G PF  N  LVPIV+PP  ++LPY +LFK+CSLVQTGCLPG KLD +F
Sbjct: 235 YKESETPFRLETGVPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLDRSF 294

Query: 293 FRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDDGL 114
           F  VNP + DI+YIEHALEKLY+ KECCY+P AWL EQY +YRTS+E PK P ICLDDGL
Sbjct: 295 FDLVNPAKHDIRYIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSPAICLDDGL 354

Query: 113 VYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           VYVHRVQVTPTRVYFSGPEVN+SNRVLRH+ +YIDNF
Sbjct: 355 VYVHRVQVTPTRVYFSGPEVNVSNRVLRHYRDYIDNF 391


>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  290 bits (741), Expect = 4e-76
 Identities = 138/218 (63%), Positives = 174/218 (79%), Gaps = 1/218 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPS-CIGQSSGLCLQLDYISNFLKNFEKDFV 477
           PRI+KKL  S+YS++++TP+DQWVRTTDFTPS CIGQSSG+CLQ       L  FE+ FV
Sbjct: 115 PRIHKKLPDSVYSYFQQTPDDQWVRTTDFTPSSCIGQSSGMCLQFPSGIK-LPEFERHFV 173

Query: 476 YYSVRETPFYIESGTPFCANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDAT 297
           YY   + PF++E+G PFC NL LVPI+QP RGLELPYR+LFK+C LVQTGCLPG KLD  
Sbjct: 174 YYKESKKPFFLENGVPFCENLDLVPIMQP-RGLELPYRLLFKVCCLVQTGCLPGPKLDDN 232

Query: 296 FFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDDG 117
           F+R +NP+  DI Y+E  LEKLY+ KECCYDP +WL+EQ++ Y T  ++PKPP +  +D 
Sbjct: 233 FYRLLNPKSFDITYLEQLLEKLYYLKECCYDPHSWLIEQHQNYCTF-KKPKPPAV--NDD 289

Query: 116 LVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           LV++HRVQVTPT+VYF GPE N+SNRVLR+F ++IDNF
Sbjct: 290 LVHIHRVQVTPTKVYFHGPEANVSNRVLRNFHDHIDNF 327


>gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlisea aurea]
          Length = 1095

 Score =  276 bits (706), Expect = 4e-72
 Identities = 135/218 (61%), Positives = 165/218 (75%), Gaps = 1/218 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSC-IGQSSGLCLQLDYISNFLKNFEKDFV 477
           PRI KK+E S YS+Y    EDQWVRTTDFT +  IGQSSGLCL+  + S  L  F  DFV
Sbjct: 174 PRISKKVEGSPYSYYNVYTEDQWVRTTDFTRAALIGQSSGLCLEFPHGSR-LPRFRDDFV 232

Query: 476 YYSVRETPFYIESGTPFCANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDAT 297
           Y+  +E  F+++ G  F  N  L PIV PPRGL LPY I+FKICSLVQ GC+PG +LDA 
Sbjct: 233 YFKEKEEEFHLQEGYSFSQNSVLAPIVGPPRGLSLPYNIVFKICSLVQMGCIPGPELDAN 292

Query: 296 FFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDDG 117
           F+R VNPQ VDI+YIEHALEK+++ KECCYDPV WL  QYR+Y+TS  +P  PTI L+ G
Sbjct: 293 FYRMVNPQLVDIRYIEHALEKIFYLKECCYDPVKWLESQYRRYQTS--KPSSPTISLEGG 350

Query: 116 LVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           LVYV RVQ+TP+RVYF+GPE+N+SNRVLR + + ID+F
Sbjct: 351 LVYVRRVQITPSRVYFTGPEINVSNRVLRQYKDRIDDF 388


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  265 bits (678), Expect = 7e-69
 Identities = 133/219 (60%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDFTPS IG SS LCLQ       L NF++ F +
Sbjct: 174 PRIYKRLENSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 232

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 233 YAERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNV 292

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 293 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 352

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 353 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 391


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  265 bits (678), Expect = 7e-69
 Identities = 133/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 166 PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 224

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  LD 
Sbjct: 225 YTERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALDV 284

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 285 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 344

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 345 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 383


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  265 bits (678), Expect = 7e-69
 Identities = 133/219 (60%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDFTPS IG SS LCLQ       L NF++ F +
Sbjct: 22  PRIYKRLENSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 80

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 81  YAERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNV 140

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 141 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 200

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 201 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 239


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  265 bits (678), Expect = 7e-69
 Identities = 133/219 (60%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NFE+ F +
Sbjct: 174 PRIYKRLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLQFRRGVR-LPNFEESFFH 232

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 233 YAERENNITLQTGFTFFVSQKSALVPNVQPPEGISIPYKILFKISSLVQHGCIPGPALNV 292

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+P+R ++  IEHALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 293 YFFRLVDPRRRNVACIEHALEKLYYIKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 352

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 353 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 391


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  265 bits (677), Expect = 9e-69
 Identities = 133/219 (60%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDFTPS IG SS LCLQ       L NF++ F +
Sbjct: 174 PRIYKRLENSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 232

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 233 YAERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNV 292

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 293 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYFKGRQPPKSPSITLDD 352

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 353 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 391


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score =  265 bits (677), Expect = 9e-69
 Identities = 133/219 (60%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDFTPS IG SS LCLQ       L NF++ F +
Sbjct: 210 PRIYKRLENSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 268

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 269 YAERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNV 328

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 329 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYFKGRQPPKSPSITLDD 388

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 389 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 427


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  264 bits (675), Expect = 2e-68
 Identities = 133/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 140 PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQEIFFH 198

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  LD 
Sbjct: 199 YTERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALDV 258

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 259 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 318

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 319 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 357


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  263 bits (673), Expect = 3e-68
 Identities = 132/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 174 PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 232

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 233 YAERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNV 292

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 293 NFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDD 352

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 353 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 391


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  263 bits (673), Expect = 3e-68
 Identities = 131/226 (57%), Positives = 161/226 (71%), Gaps = 9/226 (3%)
 Frame = -1

Query: 653 PRIYKK--------LETSIYSFYKETPEDQWVRTTDFTPS-CIGQSSGLCLQLDYISNFL 501
           PRIY+K         E  + +++ + P+DQWVRTTDFT S CIGQSS LCL+L Y    L
Sbjct: 176 PRIYEKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQ-L 234

Query: 500 KNFEKDFVYYSVRETPFYIESGTPFCANLPLVPIVQPPRGLELPYRILFKICSLVQTGCL 321
            NF ++F YY   E  F +ESG+ +  NL LVPIV P  G++LPY ILFKI  LVQ GC+
Sbjct: 235 PNFRENFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCI 294

Query: 320 PGMKLDATFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKP 141
           PG  LDA F+R VNP R+D  YI+HALEKLY+ KECC++P  WLLEQY+ Y  S++ P  
Sbjct: 295 PGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGS 354

Query: 140 PTICLDDGLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           P I LDDGLV V RVQ+TP+RVYF GPE+N+SNRVLRHF + IDNF
Sbjct: 355 PVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNF 400


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score =  263 bits (673), Expect = 3e-68
 Identities = 132/220 (60%), Positives = 159/220 (72%), Gaps = 3/220 (1%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDFTPS IG SS LCL+  +    L NF + F Y
Sbjct: 174 PRIYKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEF-HNGVRLPNFSESFFY 232

Query: 473 YSVRETPFYIESGTPFCAN---LPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLD 303
           Y        +++G  F  +   L LVPIV  P G+ELPY+ILFKI SL+Q GC PG+ L+
Sbjct: 233 YKESANQVILQTGFTFSFSQKKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALN 292

Query: 302 ATFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLD 123
             FF+ V+P+R +I  IEHALEKLY+ KECCYDPV WL EQY +Y    + PK P+I LD
Sbjct: 293 FNFFQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLD 352

Query: 122 DGLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           DGLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 353 DGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 392


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  263 bits (673), Expect = 3e-68
 Identities = 132/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 174 PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 232

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 233 YTERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNV 292

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 293 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 352

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 353 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 391


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  263 bits (673), Expect = 3e-68
 Identities = 132/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 173 PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 231

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 232 YAERENNITLQTGFTFFISQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPSLNV 291

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 292 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 351

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 352 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 390


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  263 bits (673), Expect = 3e-68
 Identities = 132/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 22  PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 80

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 81  YAERENNITLQTGFTFFISQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPSLNV 140

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 141 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 200

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 201 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 239


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  263 bits (673), Expect = 3e-68
 Identities = 132/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 22  PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 80

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 81  YAERENNITLQTGFTFFISQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPSLNV 140

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 141 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDD 200

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 201 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 239


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  263 bits (672), Expect = 4e-68
 Identities = 132/228 (57%), Positives = 164/228 (71%), Gaps = 11/228 (4%)
 Frame = -1

Query: 653 PRIYKK--------LETSIYSFYKETPEDQWVRTTDFTPS-CIGQSSGLCLQLDYISNFL 501
           PRI++K         E+ +++F+KE P+DQWVRTTDFTPS  IGQS+GLC++L Y    L
Sbjct: 179 PRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLE-L 237

Query: 500 KNFEKDFVYYSVRETPFYIESGTPFCANLPLVPIVQPPRGLELPYRILFKICSLVQTGCL 321
            +F+++F YY   E  F +E+G+ +  +L LVPIV PP G+ LPY ILFKI  LVQ GC+
Sbjct: 238 PDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCV 297

Query: 320 PGMKLDATFFRCVNPQR--VDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQP 147
            G  LD+ F+R V+P R  V I  IEHAL+KLY  KECCY+P  WL +QYRKY TS  +P
Sbjct: 298 AGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKP 357

Query: 146 KPPTICLDDGLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
             P I LDDGLVYVHRVQVTP+RVYF GPE+N+SNRVLRHF   IDNF
Sbjct: 358 SSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNF 405


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
           tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 1115

 Score =  263 bits (671), Expect = 5e-68
 Identities = 132/219 (60%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
 Frame = -1

Query: 653 PRIYKKLETSIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVY 474
           PRIYK+LE S YSF+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +
Sbjct: 174 PRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFH 232

Query: 473 YSVRETPFYIESGTPFCANLP--LVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDA 300
           Y+ RE    +++G  F  +    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+ 
Sbjct: 233 YAERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNV 292

Query: 299 TFFRCVNPQRVDIKYIEHALEKLYFAKECCYDPVAWLLEQYRKYRTSEEQPKPPTICLDD 120
            FFR V+PQR ++  IE ALEKLY+ KECCYDPV WL EQY  Y    + PK P+I LDD
Sbjct: 293 YFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDD 352

Query: 119 GLVYVHRVQVTPTRVYFSGPEVNMSNRVLRHFSNYIDNF 3
           GLVYV RV VTP +VYF GPEVN+SNRVLR++S  IDNF
Sbjct: 353 GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNF 391