BLASTX nr result

ID: Mentha26_contig00013354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00013354
         (312 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-li...    62   6e-08
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...    61   1e-07
ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606...    61   2e-07
ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutr...    60   4e-07
ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [A...    59   9e-07
ref|XP_002325451.1| DNA polymerase delta subunit 4 family protei...    58   1e-06
gb|EYU44875.1| hypothetical protein MIMGU_mgv1a016353mg [Mimulus...    56   6e-06
ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Caps...    56   6e-06
ref|NP_563854.1| DNA polymerase delta subunit 4  [Arabidopsis th...    56   6e-06
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...    56   6e-06
ref|XP_002319772.1| DNA polymerase delta subunit 4 family protei...    55   8e-06
gb|ABK93288.1| unknown [Populus trichocarpa]                           55   8e-06

>ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum
           lycopersicum]
          Length = 120

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL+RWERA KLG+NPPA VE LL+  KV   CLWDGRV
Sbjct: 83  RLDRWERAKKLGMNPPADVERLLRSNKVRNECLWDGRV 120


>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           R+ RWERA +LGLNPP Q+E+LLK  KVN  CLWDGRV
Sbjct: 89  RVGRWERAQRLGLNPPKQIEDLLKGGKVNSECLWDGRV 126


>ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606360 [Solanum tuberosum]
          Length = 120

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL+RWERA KLG+NPP  VE LL+  KV   CLWDGRV
Sbjct: 83  RLDRWERAKKLGMNPPTDVERLLRSNKVRNECLWDGRV 120


>ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutrema salsugineum]
           gi|557095301|gb|ESQ35883.1| hypothetical protein
           EUTSA_v10009118mg [Eutrema salsugineum]
          Length = 124

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL+RWERA +LG+NPP+++E LLK EKV   CLW GRV
Sbjct: 87  RLDRWERALRLGMNPPSEIERLLKTEKVQQDCLWQGRV 124


>ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [Amborella trichopoda]
           gi|548831999|gb|ERM94801.1| hypothetical protein
           AMTR_s00011p00265890 [Amborella trichopoda]
          Length = 119

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/38 (68%), Positives = 28/38 (73%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RLERWERANKLG+NPP  VE LLK       CLW+GRV
Sbjct: 82  RLERWERANKLGMNPPKDVETLLKGGNAGLDCLWEGRV 119


>ref|XP_002325451.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
           gi|222862326|gb|EEE99832.1| DNA polymerase delta subunit
           4 family protein [Populus trichocarpa]
          Length = 121

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDG 110
           RL RWERA +LGLNPP ++E LLK EKV   CLWDG
Sbjct: 84  RLARWERAQRLGLNPPKEIEGLLKGEKVRSECLWDG 119


>gb|EYU44875.1| hypothetical protein MIMGU_mgv1a016353mg [Mimulus guttatus]
          Length = 124

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYL-CLWDGRV 116
           RL RWERAN LGL+PP QV+NLL   K+N   CLWDGRV
Sbjct: 86  RLGRWERANALGLHPPQQVQNLLMGSKMNNSECLWDGRV 124


>ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Capsella rubella]
           gi|482573010|gb|EOA37197.1| hypothetical protein
           CARUB_v10010654mg [Capsella rubella]
          Length = 124

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL+RWERA +LG+NPP ++E LLK  KV   CLW GRV
Sbjct: 87  RLDRWERALRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124


>ref|NP_563854.1| DNA polymerase delta subunit 4  [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL+RWERA +LG+NPP ++E LLK  KV   CLW GRV
Sbjct: 87  RLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL+RWERA +LG+NPP ++E LLK  KV   CLW GRV
Sbjct: 85  RLDRWERALRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 122


>ref|XP_002319772.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
           gi|118488437|gb|ABK96033.1| unknown [Populus
           trichocarpa] gi|222858148|gb|EEE95695.1| DNA polymerase
           delta subunit 4 family protein [Populus trichocarpa]
          Length = 122

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL RWERA +LGLNPP + E LLK E V   C WDGRV
Sbjct: 85  RLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDGRV 122


>gb|ABK93288.1| unknown [Populus trichocarpa]
          Length = 122

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = +3

Query: 3   RLERWERANKLGLNPPAQVENLLKKEKVNYLCLWDGRV 116
           RL RWERA +LGLNPP + E LLK E V   C WDGRV
Sbjct: 85  RLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDGRV 122


Top