BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00013305
         (610 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus...   127   2e-27
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...   112   6e-23
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]             112   1e-22
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                106   6e-21
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       105   1e-20
ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobro...   105   1e-20
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro...   105   1e-20
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                  103   4e-20
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]                 103   4e-20
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]              103   4e-20
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                  103   4e-20
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]             103   4e-20
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]                  103   4e-20
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]               103   5e-20
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g...   100   2e-19
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                  99   1e-18
gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis]                   95   2e-17
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...    92   9e-17
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]                90   6e-16
emb|CAB46363.1| DNA topoisomerase I [Daucus carota]                    75   2e-11

>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
          Length = 883

 Score =  127 bits (319), Expect = 2e-27
 Identities = 85/190 (44%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDED-APMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNA 233
           M VEA + +  M+D+DD+D AP+VFKR           PE K S  QKH+ Q+GR + + 
Sbjct: 1   MTVEAREDKNMMEDMDDDDDAPLVFKRSGSSSKPKQSEPENKLS-SQKHNAQVGRQSSDV 59

Query: 234 RPQNGQNNSFQKSKM--GPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTG 407
           RPQNG N + QK K     SS  PP R  L+SPK SNS  +   +KS   +S PSTS+ G
Sbjct: 60  RPQNGTNANAQKGKSVTSSSSMKPPVRPSLVSPKSSNSSVKASPIKSPDVNSKPSTSVVG 119

Query: 408 ELNSVKHQITGENALNKSTSGPNEDSEDSEDDKPLSAR---FSKLNSGNGSKGADALNSG 578
           E  SVK  I  EN            SEDSEDDKPLSAR    S  N+ N +   +A N G
Sbjct: 120 ESKSVKSTIKEEN------------SEDSEDDKPLSARQVAGSSKNNPNQTNKPNAPNLG 167

Query: 579 QNSKIPKSED 608
           + S +PK ED
Sbjct: 168 KKSNVPKPED 177


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score =  112 bits (281), Expect = 6e-23
 Identities = 71/192 (36%), Positives = 99/192 (51%), Gaps = 8/192 (4%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   Q+H  Q      + R
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+N+S QK ++ PS++TPP +SPL SPK SNS  +   + SA  +S PS S T    
Sbjct: 61  PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSAR----FSKLNSGNGSKGADALN 572
              H  +    +    S P    N +SE S+D+KPLSAR     SK  S + +K      
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180

Query: 573 SGQNSKIPKSED 608
           S +   I +SED
Sbjct: 181 SIRRPVIEESED 192


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score =  112 bits (279), Expect = 1e-22
 Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+N+S QK ++ PS++TPP +SPL SPK SNS  +   + S   +S PS S T    
Sbjct: 61  PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSAR----FSKLNSGNGSKGADALN 572
              H  +    +    S P    N +SE S+D+KPLSAR     SK  S + +K      
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180

Query: 573 SGQNSKIPKSED 608
           S +   I +SED
Sbjct: 181 SIRRPVIEESED 192


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  106 bits (264), Expect = 6e-21
 Identities = 70/192 (36%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTPNL-MEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 59

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS++TPP +SPL SPK SNS  +   + S   +S PS S T    
Sbjct: 60  PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSAR----FSKLNSGNGSKGADALN 572
              H  +    +    S P    N +SE S+D+KPLSAR     SK  S + +K      
Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179

Query: 573 SGQNSKIPKSED 608
           S +   I +SED
Sbjct: 180 SIRRRVIEESED 191


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  105 bits (262), Expect = 1e-20
 Identities = 70/192 (36%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D+  P++FKR            E KK   QK D Q      + R
Sbjct: 1   MAVEACTTNL-MEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVR 59

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS++TPP +SPL SPK SNS  +   + S   +S PS S T    
Sbjct: 60  PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSAR----FSKLNSGNGSKGADALN 572
              H  +    +    S P    N +SE S+D+KPLSAR     SK  S + +K      
Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179

Query: 573 SGQNSKIPKSED 608
           S +   I +SED
Sbjct: 180 SIRRPVIEESED 191


>ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
           gi|590606159|ref|XP_007020668.1| DNA topoisomerase I
           alpha isoform 3 [Theobroma cacao]
           gi|508720294|gb|EOY12191.1| DNA topoisomerase I alpha
           isoform 3 [Theobroma cacao] gi|508720296|gb|EOY12193.1|
           DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
          Length = 836

 Score =  105 bits (261), Expect = 1e-20
 Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXX-PETKKSLPQKHDQQLGRPALNA 233
           MAVEA  K     D DD+D P+VFKR             E KK+  Q+ D Q GR   + 
Sbjct: 1   MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60

Query: 234 RPQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGE- 410
           R  NGQ+++  K+K   SS++PP +SP++SPK S S T+ L VKS + +   STS+  + 
Sbjct: 61  RSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQS 120

Query: 411 LNSVKHQIT-----GENALNKSTSGPNEDSEDSEDDKPLSARFSKLNSGNGSKGADALNS 575
             ++K  +T     G + + K T+ PN D +D +D  PLSAR   + S  G+KGA     
Sbjct: 121 KQALKQNMTTAVKEGRSPI-KGTTEPNSDDDDDDDSLPLSARLKGI-SNQGNKGASTSAP 178

Query: 576 GQNSK-IPKSE 605
            Q+ + +PK+E
Sbjct: 179 AQSRRLVPKTE 189


>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
           gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
           alpha isoform 1 [Theobroma cacao]
           gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
           isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
           DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
          Length = 904

 Score =  105 bits (261), Expect = 1e-20
 Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXX-PETKKSLPQKHDQQLGRPALNA 233
           MAVEA  K     D DD+D P+VFKR             E KK+  Q+ D Q GR   + 
Sbjct: 1   MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60

Query: 234 RPQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGE- 410
           R  NGQ+++  K+K   SS++PP +SP++SPK S S T+ L VKS + +   STS+  + 
Sbjct: 61  RSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQS 120

Query: 411 LNSVKHQIT-----GENALNKSTSGPNEDSEDSEDDKPLSARFSKLNSGNGSKGADALNS 575
             ++K  +T     G + + K T+ PN D +D +D  PLSAR   + S  G+KGA     
Sbjct: 121 KQALKQNMTTAVKEGRSPI-KGTTEPNSDDDDDDDSLPLSARLKGI-SNQGNKGASTSAP 178

Query: 576 GQNSK-IPKSE 605
            Q+ + +PK+E
Sbjct: 179 AQSRRLVPKTE 189


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score =  103 bits (257), Expect = 4e-20
 Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS+ TPP +SPL SPK SNS  +   + S   +S  S S T    
Sbjct: 61  PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSARFSKLNSGNGSKG 557
              H  +    +    S P    N +SE S+D+KPL AR     SG  SKG
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIAR----TSGCSSKG 167


>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
          Length = 920

 Score =  103 bits (257), Expect = 4e-20
 Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS+ TPP +SPL SPK SNS  +   + S   +S  S S T    
Sbjct: 61  PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSARFSKLNSGNGSKG 557
              H  +    +    S P    N +SE S+D+KPL AR     SG  SKG
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIAR----TSGCSSKG 167


>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
          Length = 920

 Score =  103 bits (257), Expect = 4e-20
 Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS+ TPP +SPL SPK SNS  +   + S   +S  S S T    
Sbjct: 61  PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSARFSKLNSGNGSKG 557
              H  +    +    S P    N +SE S+D+KPL AR     SG  SKG
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIAR----TSGCSSKG 167


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score =  103 bits (257), Expect = 4e-20
 Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS+ TPP +SPL SPK SNS  +   + S   +S  S S T    
Sbjct: 61  PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSARFSKLNSGNGSKG 557
              H  +    +    S P    N +SE S+D+KPL AR     SG  SKG
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIAR----TSGCSSKG 167


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score =  103 bits (257), Expect = 4e-20
 Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS+ TPP +SPL SPK SNS  +   + S   +S  S S T    
Sbjct: 61  PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSARFSKLNSGNGSKG 557
              H  +    +    S P    N +SE S+D+KPL AR     SG  SKG
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIAR----TSGCSSKG 167


>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
          Length = 926

 Score =  103 bits (257), Expect = 4e-20
 Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS+ TPP +SPL SPK SNS  +   + S   +S  S S T    
Sbjct: 61  PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSARFSKLNSGNGSKG 557
              H  +    +    S P    N +SE S+D+KPL AR     SG  SKG
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIAR----TSGCSSKG 167


>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
          Length = 926

 Score =  103 bits (256), Expect = 5e-20
 Identities = 63/173 (36%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC     M+D++D++ P++FKR            E KK   QKH  Q      + R
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKHVGQSAVHTSDVR 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELN 416
           P NG+++S QK ++ PS+ TPP +SPL SPK SNS  +   + S   +S  S S T    
Sbjct: 61  PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 417 SVKHQITGENALNKSTSGP----NEDSEDSEDDKPLSARFSKLNSGNGSKGAD 563
              H  +    +    S P    N +SE S+D+KPL AR S  +S   S  A+
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSMGKSNHAN 173


>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
           topoisomerase I [Nicotiana tabacum]
          Length = 852

 Score =  100 bits (250), Expect = 2e-19
 Identities = 79/195 (40%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
 Frame = +3

Query: 57  MAVEACDKQK---EMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPAL 227
           MAVEA  K K   E+DD DD+D P+VFKR                S  QK D + GR A 
Sbjct: 1   MAVEAFSKTKLMAEVDD-DDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQAS 54

Query: 228 NARPQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTG 407
           + R  NGQ++S +K K G SS+     SP  SPK S S  R     S  P+S PS S   
Sbjct: 55  DVRSPNGQSSSAEKVKAGTSSKASRAVSPFTSPKASPSSGR----TSPAPNSRPSASAGN 110

Query: 408 ELNSVKHQ---ITGE-NALNKSTSGPNEDSEDSEDDKPLSAR----FSKLNSGNGSKGAD 563
           +   V  Q   +  E     +  S PN+++EDSEDDKPLSAR     SK NS + +K   
Sbjct: 111 QAKDVNQQSKIVPNEPKQAVEPKSEPNDEAEDSEDDKPLSARLSSGLSKSNSSHANKVLG 170

Query: 564 ALNSGQNSKIPKSED 608
              S Q S+ PK ED
Sbjct: 171 TSASVQKSRPPKKED 185


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 74/205 (36%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAVEAC      DD+D++D P+VFKR            ET+K   QK D Q  R   ++R
Sbjct: 1   MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60

Query: 237 PQNGQNNSFQKSKMGPSSR---------TPPD-----RSPLMSPKLSNSPTRGLAVKSAM 374
           P NG+++S QK +M P S+         +PP      +SPL SPK+S S  +   V S  
Sbjct: 61  PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLP 120

Query: 375 PDSIPSTSMTGELNSVKHQITGENALNKSTSGP-------NEDSEDSEDDKPLSARFSKL 533
            +S PSTS + ++    +Q      + +  S P         DSEDS+D KPLS R    
Sbjct: 121 ANSKPSTSGSFKVKPF-NQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLR---- 175

Query: 534 NSGNGSKGADALNSGQNSKIPKSED 608
           +S + SKG     S + SK P++ED
Sbjct: 176 HSASSSKGNTNQVSKEGSK-PENED 199


>gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis]
          Length = 908

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 66/183 (36%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAV+A  KQ   DD D++D P++ KR            E KK L Q+ D Q GR   +  
Sbjct: 1   MAVQAPAKQSLFDDFDEDDGPLIVKRKNTASKPNQLSSELKKPLSQRLDGQSGRQISDGV 60

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTG--- 407
             NG N+  QK K+  SS+  P +SPL+SPK S S T+    KS +     ST + G   
Sbjct: 61  FLNGINSYSQKGKVVQSSKASPVKSPLVSPKASTSSTKAATQKSLVEIRRASTPLDGRPK 120

Query: 408 ------ELNSVKHQITGENALNKSTSGPNEDSEDSEDDKPLSARFSKLNSGNGSKGADAL 569
                 + ++VK +    +    +TS  + +  DS+DDKPLSAR  K NS  G KG    
Sbjct: 121 FSSGQNKYSAVKEE--KSSIRQSTTSDIHFEDSDSDDDKPLSARL-KGNSNQGDKGTGKS 177

Query: 570 NSG 578
            +G
Sbjct: 178 TAG 180


>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
           tuberosum]
          Length = 905

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 75/213 (35%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDED-APMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNA 233
           MAVEA  K   M+D+DD+D  P+VFKR                S  QK D + GR   + 
Sbjct: 1   MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQVPDV 55

Query: 234 RPQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKL--------------------SNSPTRG 353
           R  NGQ++S  K K   SS+  P  SPL SPK                     S +P   
Sbjct: 56  RSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSPAPNFRTSPAPNSRTPPAP 115

Query: 354 LAVKSAMPDSIPSTSMTGELNSVKHQITGENALNKST----SGPNEDSEDSEDDKPLSAR 521
            +  S  P+S PS+S   +  +V  Q       +K      S PN+++EDSEDDKPLSAR
Sbjct: 116 NSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKESKQAIEPKSEPNDEAEDSEDDKPLSAR 175

Query: 522 ----FSKLNSGNGSKGADALNSGQNSKIPKSED 608
                SK NS + +       S Q S+ PK ED
Sbjct: 176 VPSGLSKSNSIHANNVLGTSTSVQKSRPPKKED 208


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 69/193 (35%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
 Frame = +3

Query: 57  MAVEACDKQKEMDDLDDEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNAR 236
           MAV+AC K+K MD++D++D P+VFKR            +TKKS  Q++D Q GR   +  
Sbjct: 1   MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKS-SQRYDGQSGRQVSDVP 59

Query: 237 PQNGQNNSFQKSKMGPSSRTPPDRSPLMSPKLSN-----SPTRGLAVKSAMPDSIPSTSM 401
             NGQ++S  K   G +++    +SP+ SPK S      SP     V S+  D    +S 
Sbjct: 60  STNGQSSSASK---GKTTKLSSMKSPIASPKASTSFAKASPVANPKVSSSSDDRSKHSSK 116

Query: 402 TGELNSVKHQITGENALNKSTSGPNEDSEDSEDDKPLSAR----FSKLNSGNGSKGADAL 569
              +N VK +   +  +N +     E   DSED+KPLSAR     +K +S N +KG   +
Sbjct: 117 QNTINVVKEE---KELVNPAA----EPYGDSEDEKPLSARLFTGLTKGSSNNANKG--LI 167

Query: 570 NSGQNS-KIPKSE 605
           NS   S  +PK E
Sbjct: 168 NSSPASLPVPKPE 180


>emb|CAB46363.1| DNA topoisomerase I [Daucus carota]
          Length = 909

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
 Frame = +3

Query: 105 DEDAPMVFKRXXXXXXXXXXXPETKKSLPQKHDQQLGRPALNARPQNGQNNSFQKSKMGP 284
           ++D P++FKR           P  +K +  +   Q+GR   + R  NG +++ QK K  P
Sbjct: 8   EDDKPLIFKRSNTSVKQNQAKPRCQKIISAEAVWQVGRLISDVRSTNGHDSNVQKGKTVP 67

Query: 285 SSRTPPDRSPLMSPKLSNSPTRGLAVKSAMPDSIPSTSMTGELNSVKHQ-----ITGENA 449
           S++  P  SPL SPK S S ++   VK  +  +  STS   +      Q     +  E  
Sbjct: 68  STKGSPVVSPLASPKASVSSSKASQVKPPVASTKASTSGADQSRQNSQQNRTAIVKAERP 127

Query: 450 LNKSTSGPNEDSEDSEDDKPLSAR---------FSKLNSGNGSKGADALNSGQNSKIPKS 602
                  P+  SEDS+DDKPL++R          S++N    S G  A       K   S
Sbjct: 128 SGIPKEEPDSGSEDSDDDKPLNSRLPVGGSKGSISEVNRRPSSSGPAAFEKDLGIKEEDS 187

Query: 603 ED 608
           ED
Sbjct: 188 ED 189