BLASTX nr result

ID: Mentha26_contig00013051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00013051
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523299.1| arginine/serine-rich splicing factor, putati...    59   7e-07
ref|XP_007051485.1| RNA-binding family protein isoform 5, partia...    58   2e-06
ref|XP_007051483.1| RNA-binding (RRM/RBD/RNP motifs) family prot...    58   2e-06
ref|XP_007051482.1| RNA-binding (RRM/RBD/RNP motifs) family prot...    58   2e-06
ref|XP_007051481.1| RNA-binding family protein isoform 1 [Theobr...    58   2e-06
gb|EYU32278.1| hypothetical protein MIMGU_mgv1a012753mg [Mimulus...    57   3e-06
gb|EYU32277.1| hypothetical protein MIMGU_mgv1a012753mg [Mimulus...    57   3e-06
gb|EPS66385.1| hypothetical protein M569_08387, partial [Genlise...    57   3e-06
emb|CBI40588.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac...    57   3e-06

>ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537387|gb|EEF39015.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 259

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVYD+YNGPSY+R RSP+YG
Sbjct: 196 SPDYGRARSPVYDKYNGPSYDRRRSPEYG 224


>ref|XP_007051485.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
           gi|508703746|gb|EOX95642.1| RNA-binding family protein
           isoform 5, partial [Theobroma cacao]
          Length = 230

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVYDRYNGP+Y+R +SP+YG
Sbjct: 179 SPDYGRARSPVYDRYNGPAYDRRKSPEYG 207


>ref|XP_007051483.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 3
           [Theobroma cacao] gi|508703744|gb|EOX95640.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           3 [Theobroma cacao]
          Length = 255

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVYDRYNGP+Y+R +SP+YG
Sbjct: 203 SPDYGRARSPVYDRYNGPAYDRRKSPEYG 231


>ref|XP_007051482.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
           [Theobroma cacao] gi|590720994|ref|XP_007051484.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           2 [Theobroma cacao] gi|508703743|gb|EOX95639.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           2 [Theobroma cacao] gi|508703745|gb|EOX95641.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           2 [Theobroma cacao]
          Length = 254

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVYDRYNGP+Y+R +SP+YG
Sbjct: 203 SPDYGRARSPVYDRYNGPAYDRRKSPEYG 231


>ref|XP_007051481.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508703742|gb|EOX95638.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 283

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVYDRYNGP+Y+R +SP+YG
Sbjct: 203 SPDYGRARSPVYDRYNGPAYDRRKSPEYG 231


>gb|EYU32278.1| hypothetical protein MIMGU_mgv1a012753mg [Mimulus guttatus]
          Length = 241

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVYDRY GPSY+R RSP YG
Sbjct: 200 SPDYGRPRSPVYDRYTGPSYDRPRSPAYG 228


>gb|EYU32277.1| hypothetical protein MIMGU_mgv1a012753mg [Mimulus guttatus]
          Length = 209

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVYDRY GPSY+R RSP YG
Sbjct: 168 SPDYGRPRSPVYDRYTGPSYDRPRSPAYG 196


>gb|EPS66385.1| hypothetical protein M569_08387, partial [Genlisea aurea]
          Length = 243

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR RSPVY+RY+GPS+ R RSPDYG
Sbjct: 204 SPDYGRTRSPVYERYSGPSHERGRSPDYG 232


>emb|CBI40588.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR +SPVYDRYNGP+Y R RSP+YG
Sbjct: 183 SPDYGRAQSPVYDRYNGPAYERNRSPEYG 211


>ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
           vinifera]
          Length = 241

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -1

Query: 302 SPDYGRDRSPVYDRYNGPSYNRARSPDYG 216
           SPDYGR +SPVYDRYNGP+Y R RSP+YG
Sbjct: 200 SPDYGRAQSPVYDRYNGPAYERNRSPEYG 228


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