BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00012911
         (321 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus...   187   1e-45
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   172   6e-41
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   172   6e-41
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   168   8e-40
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...   168   8e-40
gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlise...   163   2e-38
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...   161   8e-38
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   161   1e-37
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...   160   2e-37
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr...   160   2e-37
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...   160   2e-37
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   159   3e-37
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...   158   6e-37
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   158   8e-37
emb|CAD20832.1| sigma factor [Spinacia oleracea]                      157   2e-36
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp....   152   4e-35
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha...   152   6e-35
gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]               152   6e-35
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps...   151   8e-35
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi...   151   1e-34

>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus guttatus]
          Length = 478

 Score =  187 bits (475), Expect = 1e-45
 Identities = 91/106 (85%), Positives = 98/106 (92%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVLFIARNY GLGVAFEDLIQAG +GVLQGAERFDQ+RGYKFSTYVQYW+RKSMSTLVA
Sbjct: 249 SLVLFIARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVA 308

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           +H+RG+RIP TLSK +NQVHKARKAL  SNG YPDD EIAKFTGLS
Sbjct: 309 KHARGVRIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLS 354


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  172 bits (435), Expect = 6e-41
 Identities = 80/106 (75%), Positives = 97/106 (91%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL+IARNY G+GVAFED++QAG +GVLQGAERFD T+GY+FSTYVQYW+RKSMSTLVA
Sbjct: 333 SLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVA 392

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           RH+RG++IP TL++A+ Q+ KARKAL +S+G YPDD EIAKFTGLS
Sbjct: 393 RHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLS 438


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  172 bits (435), Expect = 6e-41
 Identities = 80/106 (75%), Positives = 97/106 (91%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL+IARNY G+GVAFED++QAG +GVLQGAERFD T+GY+FSTYVQYW+RKSMSTLVA
Sbjct: 383 SLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVA 442

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           RH+RG++IP TL++A+ Q+ KARKAL +S+G YPDD EIAKFTGLS
Sbjct: 443 RHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLS 488


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           tuberosum]
          Length = 555

 Score =  168 bits (425), Expect = 8e-40
 Identities = 80/106 (75%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL++ARNY GLGVAFEDLIQAG +GVLQGA RFD TRGYKFSTYVQYW+RKS+S LVA
Sbjct: 328 SLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVA 387

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           +H+RG+RIP T+ K +NQ+HKARK L RS+G +P D EIAKFTGLS
Sbjct: 388 QHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLS 433


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           lycopersicum]
          Length = 551

 Score =  168 bits (425), Expect = 8e-40
 Identities = 80/106 (75%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL++ARNY GLGVAFEDLIQAG +GVLQGA RFD TRGYKFSTYVQYW+RKS+S LVA
Sbjct: 324 SLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVA 383

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           +H+RG+RIP T+ K +NQ+HKARK L RS+G +P D EIAKFTGLS
Sbjct: 384 QHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLS 429


>gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlisea aurea]
          Length = 463

 Score =  163 bits (413), Expect = 2e-38
 Identities = 77/106 (72%), Positives = 89/106 (83%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLV+FIARNYWGLG+AFEDLIQAG + VL+GAERFDQ+RGYKFSTYVQYW+RKSMS LVA
Sbjct: 243 SLVVFIARNYWGLGIAFEDLIQAGNMAVLRGAERFDQSRGYKFSTYVQYWIRKSMSMLVA 302

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
            HSRGIRIP T++K +NQV  ARK L  + G  P D E+AK TG+S
Sbjct: 303 NHSRGIRIPGTMNKVINQVQNARKQLCAATGRTPSDLEVAKLTGIS 348


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
           gi|222854562|gb|EEE92109.1| hypothetical protein
           POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score =  161 bits (408), Expect = 8e-38
 Identities = 75/106 (70%), Positives = 92/106 (86%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL+IARNY G+G+A EDLIQAG +G+LQGAERFD TRGY+FSTYVQYW+RKSM  +V 
Sbjct: 331 SLVLYIARNYRGMGIAMEDLIQAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVE 390

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           RH+RGI+IP  LS+++N++ KARKAL  S+G YPDD E+AKFTGLS
Sbjct: 391 RHARGIQIPYALSRSINKIQKARKALSNSHGRYPDDWEVAKFTGLS 436


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
           gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
           C, putative [Theobroma cacao]
          Length = 848

 Score =  161 bits (407), Expect = 1e-37
 Identities = 76/106 (71%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL+ ARNY GLG+A EDLIQAG +GVLQGAERFD TRGY+FSTYVQ+W+RKS+S +VA
Sbjct: 620 SLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVA 679

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           RH+RGI++P TLS+A+ Q+ KARKAL +S+G YPD+  IAKFTGLS
Sbjct: 680 RHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLS 725


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score =  160 bits (404), Expect = 2e-37
 Identities = 74/105 (70%), Positives = 91/105 (86%)
 Frame = +3

Query: 6   LVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVAR 185
           LVLF+ARNY GLG+ F DL+QAG VGVLQGAERFD TRGYKFSTYVQYW+RKS+S +VAR
Sbjct: 307 LVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVAR 366

Query: 186 HSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           H+RGI+IP  L++ ++++ KARKAL  S+G YP+D EIAK+TGLS
Sbjct: 367 HARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLS 411


>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553990|gb|ESR64004.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 442

 Score =  160 bits (404), Expect = 2e-37
 Identities = 74/105 (70%), Positives = 91/105 (86%)
 Frame = +3

Query: 6   LVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVAR 185
           LVLF+ARNY GLG+ F DL+QAG VGVLQGAERFD TRGYKFSTYVQYW+RKS+S +VAR
Sbjct: 307 LVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVAR 366

Query: 186 HSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           H+RGI+IP  L++ ++++ KARKAL  S+G YP+D EIAK+TGLS
Sbjct: 367 HARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLS 411


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553989|gb|ESR64003.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score =  160 bits (404), Expect = 2e-37
 Identities = 74/105 (70%), Positives = 91/105 (86%)
 Frame = +3

Query: 6   LVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVAR 185
           LVLF+ARNY GLG+ F DL+QAG VGVLQGAERFD TRGYKFSTYVQYW+RKS+S +VAR
Sbjct: 307 LVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVAR 366

Query: 186 HSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           H+RGI+IP  L++ ++++ KARKAL  S+G YP+D EIAK+TGLS
Sbjct: 367 HARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLS 411


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score =  159 bits (403), Expect = 3e-37
 Identities = 76/106 (71%), Positives = 91/106 (85%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL+ ARNY G G+A EDL+QAG +GVL+GAERFD TRGY+FSTYVQYW+RKSMS +V+
Sbjct: 332 SLVLYFARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVS 391

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           R +RGI+IP TLS+A+ Q+ KARKAL  SNG YPDD EIAK+TGLS
Sbjct: 392 RLARGIQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLS 437


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
           subsp. vesca]
          Length = 545

 Score =  158 bits (400), Expect = 6e-37
 Identities = 76/106 (71%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL++ARNY GLGVA +DL+QAG +G+LQGAERFD +RGY+FSTYVQYW+RKSMS LVA
Sbjct: 316 SLVLYLARNYRGLGVALDDLLQAGNLGLLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVA 375

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           +H+RGI+IP+TLSKA+N++ KARKA   S+  YPDD EIAK TGLS
Sbjct: 376 QHARGIKIPNTLSKAINRIQKARKANYNSHMKYPDDEEIAKITGLS 421


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
           gi|462419859|gb|EMJ24122.1| hypothetical protein
           PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  158 bits (399), Expect = 8e-37
 Identities = 76/106 (71%), Positives = 92/106 (86%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL++ARNY GLGVA +DL+QAG +G+LQGAERFD +RGY+FSTYVQYW+RKSMS LVA
Sbjct: 327 SLVLYLARNYRGLGVALDDLMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVA 386

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           +H+RG++IP TLSKA+NQ+ KARKA   S+  YPDD EIAK TGLS
Sbjct: 387 QHARGVQIPFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLS 432


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score =  157 bits (396), Expect = 2e-36
 Identities = 72/106 (67%), Positives = 91/106 (85%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVL+++R Y GLGVA EDL+QAG +G+LQGAERFD TRGY+FSTYVQYW+RK+MS LV+
Sbjct: 321 SLVLYLSRYYRGLGVAHEDLMQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVS 380

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLS 320
           RH RGI++P+TLS  +N+V KARK L+RS G +PDD E++K TGLS
Sbjct: 381 RHGRGIKVPTTLSTTINRVQKARKILKRSQGKHPDDVEVSKSTGLS 426


>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323785|gb|EFH54206.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  152 bits (385), Expect = 4e-35
 Identities = 74/107 (69%), Positives = 90/107 (84%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD TRGYKFSTYVQYW+RKSMS +V+
Sbjct: 339 SLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVS 398

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLS 320
           RH+RG+ IPS++ + +NQ+ KARK L+ S+G  YP D +I+K T LS
Sbjct: 399 RHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSLS 445


>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
           gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
           polymerase sigma factor sigC; Short=Sigma factor C;
           Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
           sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
           Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
           [Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
           [Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
           factor SigC [Arabidopsis thaliana]
           gi|7630012|emb|CAB88354.1| sigma factor SigC
           [Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
           At3g53920 [Arabidopsis thaliana]
           gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
           C [Arabidopsis thaliana]
          Length = 571

 Score =  152 bits (383), Expect = 6e-35
 Identities = 75/107 (70%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD TRGYKFSTYVQYW+RKSMST+V+
Sbjct: 342 SLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVS 401

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLS 320
           RH+RG+ IPS++ + +N + KARK L+ S+G  Y  D EIAK TG S
Sbjct: 402 RHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHS 448


>gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]
          Length = 291

 Score =  152 bits (383), Expect = 6e-35
 Identities = 75/107 (70%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD TRGYKFSTYVQYW+RKSMST+V+
Sbjct: 62  SLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVS 121

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLS 320
           RH+RG+ IPS++ + +N + KARK L+ S+G  Y  D EIAK TG S
Sbjct: 122 RHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHS 168


>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
           gi|482559522|gb|EOA23713.1| hypothetical protein
           CARUB_v10016920mg [Capsella rubella]
          Length = 581

 Score =  151 bits (382), Expect = 8e-35
 Identities = 74/107 (69%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD  RGYKFSTYVQYW+RKSMS +V+
Sbjct: 352 SLVLFLARNYRGLGIAHEDLIQAGFVGVLQGAERFDHARGYKFSTYVQYWIRKSMSMMVS 411

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLS 320
           RH+RG+ IPS++ + +NQ+ KARK L+ S+G  YP D EI+K T LS
Sbjct: 412 RHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEEISKLTSLS 458


>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
          Length = 571

 Score =  151 bits (381), Expect = 1e-34
 Identities = 74/107 (69%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   SLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVA 182
           SLVLF+ARNY G+G+A EDLIQAG VGVLQGAERFD TRGYKFSTYVQYW+RKSMST+V+
Sbjct: 342 SLVLFLARNYRGMGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVS 401

Query: 183 RHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLS 320
           RH+RG+ IPS++ + +N + KARK L+ S+G  Y  D EIAK TG S
Sbjct: 402 RHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHS 448