BLASTX nr result

ID: Mentha26_contig00012464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00012464
         (571 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76389.1| hypothetical protein VITISV_023590 [Vitis vinifera]    61   2e-07
ref|XP_007036334.1| Myb domain protein 86 [Theobroma cacao] gi|5...    60   5e-07
ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis...    58   2e-06

>emb|CAN76389.1| hypothetical protein VITISV_023590 [Vitis vinifera]
          Length = 153

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
 Frame = -1

Query: 538 GFNSMPDLTNFDHHRKMVEADYSDSSTAYL----------MKEXXXXXXXXXXXSRIENV 389
           GF S+P LTNFD H  + E D+SD+S + +                         +I N+
Sbjct: 24  GFASLPGLTNFD-HGNLTETDFSDNSASRMGSFFFNEAKESSSNSSNITSHPAGFQINNM 82

Query: 388 ---AAFSWDAETKLESMFEFQFNGVE--------------RNQSSEDFSNYAL 281
               AFSWDAE KLE++F++Q +G++               +Q+SEDFSNY L
Sbjct: 83  GENVAFSWDAENKLEALFQYQISGIKSEELKPSSWYGDQVHSQNSEDFSNYPL 135


>ref|XP_007036334.1| Myb domain protein 86 [Theobroma cacao] gi|508773579|gb|EOY20835.1|
           Myb domain protein 86 [Theobroma cacao]
          Length = 371

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 48/131 (36%), Positives = 64/131 (48%), Gaps = 37/131 (28%)
 Frame = -1

Query: 535 FNSMPDLTNFDHHRKMVEADYSDSS-----TAYLMKEXXXXXXXXXXXSR---------I 398
           F SMP LTNFDH   M   D+SD+S     T++L+ E           S          +
Sbjct: 241 FTSMPSLTNFDHGN-MSGTDFSDNSASRISTSFLLNEAKESSSNSSNISSYTGFQMNNMV 299

Query: 397 ENVAAFSWDAETKLESMFEFQFNGVE----------------RNQSSEDFSNY---ALPQ 275
           EN  AFSWD E KL++MF+FQ NG++                 N +S DFS+Y   +L +
Sbjct: 300 EN-GAFSWDTENKLDTMFQFQVNGIKSEELKPGSWQEGQGQLHNHNSVDFSSYPLTSLSE 358

Query: 274 ELT----DVFQ 254
           +LT    DVFQ
Sbjct: 359 DLTGANFDVFQ 369


>ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis vinifera]
          Length = 367

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 34/129 (26%)
 Frame = -1

Query: 538 GFNSMPDLTNFDHHRKMVEADYSDSSTAYL----------MKEXXXXXXXXXXXSRIENV 389
           GF S+P LTNFD    + E D+SD+S + +                         +I N+
Sbjct: 238 GFASLPGLTNFD-QGNLTETDFSDNSASRMGSFFFNEAKESSSNSSNITSHPAGFQINNM 296

Query: 388 ---AAFSWDAETKLESMFEFQFNGVE--------------RNQSSEDFSNY---ALPQEL 269
               AFSWDAE KLE++F++Q +G++               +Q+SEDFSNY   +L ++L
Sbjct: 297 GENVAFSWDAENKLEALFQYQISGIKSEELKPSSWYGDQVHSQNSEDFSNYPLTSLSEDL 356

Query: 268 T----DVFQ 254
                DVFQ
Sbjct: 357 NGASFDVFQ 365


Top