BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00012434
         (1215 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus...   538   e-150
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]       464   e-128
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   458   e-126
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   452   e-124
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   451   e-124
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ...   450   e-124
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   450   e-124
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik...   449   e-124
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592...   447   e-123
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ...   445   e-122
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   439   e-121
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   437   e-120
ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phas...   436   e-119
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik...   432   e-118
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi...   431   e-118
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...   430   e-118
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...   430   e-118
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        426   e-117
ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prun...   424   e-116

>gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus guttatus]
          Length = 435

 Score =  538 bits (1387), Expect = e-150
 Identities = 261/401 (65%), Positives = 306/401 (76%), Gaps = 2/401 (0%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNT-NDGAEIID 178
            H DACSL RW A+ESY+FMY +PW +VNDFYLD VNGRRS+ +LF +E    +DGAE I+
Sbjct: 34   HNDACSLSRWNAKESYQFMYEKPWQKVNDFYLDVVNGRRSVSELFERETYAVHDGAETIE 93

Query: 179  DSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
            D DKP+   V AK R+GRW RVTFKI +SY+G+SFDGWQKQP LNTVQGL+E +LGKFVD
Sbjct: 94   DCDKPDLMSVRAKDRSGRWARVTFKIRLSYHGSSFDGWQKQPGLNTVQGLIEKSLGKFVD 153

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            E KAQ+LKEKKLP++ C  VAGRTDKGVTAL Q C+FYTWRKD+K +DIEDA+   APGK
Sbjct: 154  EDKAQMLKEKKLPVDCCVTVAGRTDKGVTALEQFCSFYTWRKDIKTVDIEDAINGVAPGK 213

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            IR  SVSQV+RDFHPNFSAKWR Y YIFPF+DEN DDE S+C+K+ LD  +CHD  YGE 
Sbjct: 214  IRAISVSQVTRDFHPNFSAKWRRYLYIFPFDDENVDDEASQCEKNVLDSDVCHDGRYGEL 273

Query: 719  LREQTCEDGDDDYVETQ-QSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIG 895
               + C +  DDY +T+ Q+G KP +F+VS VN LLH LEGKLLSFRMFARDTKASRNIG
Sbjct: 274  PGVENCGNEIDDYEQTETQTGHKPLSFDVSCVNRLLHHLEGKLLSFRMFARDTKASRNIG 333

Query: 896  PPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXX 1075
            PPTECF+ H+RA+EAY+ CPK G  SK+MC+ELVANRFLRKMVRVLV             
Sbjct: 334  PPTECFIFHSRASEAYIRCPKEGTRSKIMCIELVANRFLRKMVRVLVATAIREAAAGADE 393

Query: 1076 XXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
              L+KL+D             DGLCLVDVGY EFD+K C I
Sbjct: 394  DALLKLIDATCRRATAPPAPPDGLCLVDVGYAEFDRKNCFI 434


>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
          Length = 406

 Score =  464 bits (1195), Expect = e-128
 Identities = 241/400 (60%), Positives = 285/400 (71%), Gaps = 1/400 (0%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNT-NDGAEIID 178
            H DA SL RWTA+ESY+FMY RPW RVN FYL+ VNGRR+L +LF KE +  +D    +D
Sbjct: 26   HNDAFSLCRWTAKESYQFMYSRPWQRVNCFYLELVNGRRTLSELFPKEKHAIHDTDRTLD 85

Query: 179  DSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
              + P S  +P + RTGRW R+TFKI++SY+G SFDGWQKQP LNTVQGL+E++LG F+D
Sbjct: 86   VYNYP-SASLPNEQRTGRWARLTFKIILSYHGYSFDGWQKQPGLNTVQGLIENSLGVFID 144

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            EKKA  LKEK LP +GCA+VAGRTDKGV+ALGQVC+FYTWRK+V+A DI +A+  +APGK
Sbjct: 145  EKKALQLKEKNLPRDGCAVVAGRTDKGVSALGQVCSFYTWRKEVEAEDIMEAINDSAPGK 204

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            +RVTSVSQVSR+FHPNFSAKWR Y YIFP N E  D E  + +K++     C DD  G  
Sbjct: 205  LRVTSVSQVSREFHPNFSAKWRRYLYIFPLNHEYRDREAFKSEKNDFCGDNCLDDQSG-- 262

Query: 719  LREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGP 898
                             Q+G KP  FEVSRV+ LL  LEGKLLSFRMFARDTKASR+IGP
Sbjct: 263  ----------------MQTGCKPLNFEVSRVSQLLLHLEGKLLSFRMFARDTKASRSIGP 306

Query: 899  PTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXX 1078
            PTECF+ HARAAEAYLPC +    SK+MCVELVA+RFLRKMVRVLV              
Sbjct: 307  PTECFIFHARAAEAYLPCSEEETKSKIMCVELVADRFLRKMVRVLVATAIREAAAGADED 366

Query: 1079 XLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
             L++LM              DGLCLVDVGYTEFD+K CLI
Sbjct: 367  MLLQLMGATCRRATAPPAPPDGLCLVDVGYTEFDRKVCLI 406


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  458 bits (1178), Expect = e-126
 Identities = 236/410 (57%), Positives = 284/410 (69%), Gaps = 10/410 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVN-TNDGAEIID 178
            HTD+C   RWTARES++FMY RPW  V+DFY + VNGR S  +LF  +++   D A+I +
Sbjct: 39   HTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRSQMHFVRDDAKIQE 98

Query: 179  DSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
            DS+K E E    + R GRW RV FKI +SY+G SFDGWQKQP LNTVQGLVE +LGKFVD
Sbjct: 99   DSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLVEKSLGKFVD 158

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            EKKAQ LKE   PLEGCA+VAGRTDKGV+AL QVC+FYTWRKDV+  +IEDA+ ++APGK
Sbjct: 159  EKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIEDAINSSAPGK 218

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--------ENED-DEVSECKKHNLDKTI 691
            IRV SVS+VSR FHPNFSAKWR Y YIFP ND        ++ED + +   +K++  +  
Sbjct: 219  IRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLENLRSYEKYDEQRNG 278

Query: 692  CHDDPYGERLREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARD 871
            C +    E + E    D D+      +   KP  F + RVN LL QLEGKLLS+++FARD
Sbjct: 279  CAELTSEEHVEELITSDKDE-----LEGAKKPRIFSICRVNQLLQQLEGKLLSYKIFARD 333

Query: 872  TKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXX 1051
            TKASRN+GPPTECF++HARA EA LPCP  G G KVMCVELVANRFLRKMVRVLV     
Sbjct: 334  TKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLRKMVRVLVATSIR 393

Query: 1052 XXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLIP 1201
                      L+KLMD             DGLCL DVGYTEFD + C++P
Sbjct: 394  EAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIVP 443


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  452 bits (1162), Expect = e-124
 Identities = 236/408 (57%), Positives = 282/408 (69%), Gaps = 9/408 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDD 181
            HT      RWTARES++FMY RPW +V DFY + V GR SL  L G E +     EI++ 
Sbjct: 28   HTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHPIHDGEIVEA 87

Query: 182  SDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDE 361
            SDK E   V  K R GRW R+TFKI++SY+G SFDGWQKQP LNTVQGLVE++LG+FVDE
Sbjct: 88   SDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDE 147

Query: 362  KKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKI 541
            +KAQ LKEK LP+EG   VAGRTDKGVTAL QVC+FYTW+KDVK  DIEDA+  AAPGK+
Sbjct: 148  RKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKL 207

Query: 542  RVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLD-KTICHDDPYGER 718
            RV SVS+VSR FHPNFSAKWRHYFYIFP ND ++ +++SE   + +D + I  ++ YGE+
Sbjct: 208  RVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE---NEMDIQKISFNEKYGEQ 264

Query: 719  LREQTCEDGDDDYVETQ--------QSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDT 874
              E   +    +  E          +S  KP TF +SRV+ LL QLEGKLLS+++FARDT
Sbjct: 265  GSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDT 324

Query: 875  KASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXX 1054
            KASRNIGPPTECFV HARA EA L     G G+KVMC+ELVANRFLRKMVRVLV      
Sbjct: 325  KASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVATSIRE 384

Query: 1055 XXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
                     L+KLMD             DGLCL+DVG+TEFD + C I
Sbjct: 385  AAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 432


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  451 bits (1160), Expect = e-124
 Identities = 241/406 (59%), Positives = 275/406 (67%), Gaps = 7/406 (1%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIID 178
            HTD C   RWTARESY+FMY RPW  V DFY  AVNGR SL  L G E+   +D AE   
Sbjct: 37   HTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPL 96

Query: 179  DSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
              +  E      K +TGRW R TFKI++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVD
Sbjct: 97   IYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVD 156

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            EKKAQ+LK+K LPLEGCALVAGRTDKGVTAL QVC+FYTWR DVK  DIED++ +AAPGK
Sbjct: 157  EKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGK 216

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            +R +SVSQVSR FHPNFSAKWR Y YI P ND  E+ E       N++     +    E 
Sbjct: 217  LRTSSVSQVSRIFHPNFSAKWRRYLYILPLND-GENMEPDSTTWENVENREEENFVKIEA 275

Query: 719  LREQTCEDGDDDYV------ETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKA 880
               + C DG  D +      E   S  KP TF ++RVN LL +LEGKLLS++MFARDTKA
Sbjct: 276  SNGEKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKA 335

Query: 881  SRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXX 1060
            SRN GPPTECFV+HARAAE  LPC + GVG  VMCVELVANRFLRKMVRVLV        
Sbjct: 336  SRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAA 395

Query: 1061 XXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
                   L++LMD             DGL LVDVGYT+FD + C I
Sbjct: 396  AGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
            gi|508784930|gb|EOY32186.1| Pseudouridine synthase
            isoform 1 [Theobroma cacao]
          Length = 444

 Score =  450 bits (1157), Expect = e-124
 Identities = 238/408 (58%), Positives = 282/408 (69%), Gaps = 9/408 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDD 181
            H+D+CS  RWTARESY FMY R W  V DFY + VNGR +L  LFG E + +D +E ++ 
Sbjct: 47   HSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTLFGTETSIHDDSETVEV 106

Query: 182  SDKPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
            SD+        KG R+GRWERVTFKI+ISYNG +FDGWQKQP LNTVQ +VE +LG+FVD
Sbjct: 107  SDE--------KGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVD 158

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            EKKAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTWRKDVK  DIEDA+ + APGK
Sbjct: 159  EKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGK 218

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            +RV SVS+VSR FHPNFSAKWRHY YIFP +  N++ E   C+     +    D  Y E+
Sbjct: 219  LRVVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQSCENKKEVENFISDGNYNEQ 276

Query: 719  LREQTCEDGDDDYVET--------QQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDT 874
             R    E+   + VE          ++  KP  F V RVN LL QLE KLLS++MFARDT
Sbjct: 277  -RNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDT 335

Query: 875  KASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXX 1054
            KASRNIGPPTECF++HARAAEA +PC   G G +VMCVELVANRFLRKMVRVLV      
Sbjct: 336  KASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVELVANRFLRKMVRVLVATSIRE 395

Query: 1055 XXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
                     L+KLM              DGLCLVDVGYTEFD + CL+
Sbjct: 396  AAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 443


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  450 bits (1157), Expect = e-124
 Identities = 240/406 (59%), Positives = 275/406 (67%), Gaps = 7/406 (1%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIID 178
            HTD C   RWTARESY+FMY RPW  V DFY  AVNGR SL  L G E+   +D AE   
Sbjct: 37   HTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPL 96

Query: 179  DSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
              +  E      K +TGRW R TFKI++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVD
Sbjct: 97   IYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVD 156

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            EKKAQ+LK+K LPLEGCALVAGRTDKGVTAL QVC+FYTWR DVK  DIED++ +AAPGK
Sbjct: 157  EKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGK 216

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            +R +SVSQVSR FHPNFSAKWR Y YI P ND  E+ E       N++     +    E 
Sbjct: 217  LRTSSVSQVSRIFHPNFSAKWRRYLYILPLND-GENMEPDSTTWENVENREEENFVKIEA 275

Query: 719  LREQTCEDGDDDYV------ETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKA 880
               + C DG  D +      +   S  KP TF ++RVN LL +LEGKLLS++MFARDTKA
Sbjct: 276  SNGEKCVDGIHDNLVLSPNDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKA 335

Query: 881  SRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXX 1060
            SRN GPPTECFV+HARAAE  LPC + GVG  VMCVELVANRFLRKMVRVLV        
Sbjct: 336  SRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAA 395

Query: 1061 XXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
                   L++LMD             DGL LVDVGYT+FD + C I
Sbjct: 396  AGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 436

 Score =  449 bits (1156), Expect = e-124
 Identities = 236/419 (56%), Positives = 282/419 (67%), Gaps = 19/419 (4%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIID 178
            HTD+C   RWT+RE YEFMY RPWH+V DFY D V G  SL  LFGKE   + + AEI +
Sbjct: 33   HTDSCKFSRWTSRECYEFMYARPWHKVVDFYADMVKGHISLSGLFGKETPADHEDAEIRE 92

Query: 179  DSDKPESECVPAKGRT----GRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALG 346
            D +K E   +P K ++    GRW R  F I++SY+G SFDGWQKQP LNTVQGLVE +LG
Sbjct: 93   DHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLG 152

Query: 347  KFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAA 526
            +FVDEKKAQ+LK+K LPLE CALVAGRTDKGV+A  QVC+FYTWRKDVK  D++ AL  A
Sbjct: 153  EFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKA 212

Query: 527  APGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND---ENEDDEV-----------SEC 664
            APGKIRV S+++VSR+FHPNFSAKWRHY YIFP +D   E +  ++           +EC
Sbjct: 213  APGKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDDVLGEKQGGQIWIDDSTNVHQQNEC 272

Query: 665  KKHNLDKTICHDDPYGERLREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKL 844
             K ++DK+  ++             + +D  V     G KP  FEV +VN LL QLEGKL
Sbjct: 273  DKSDVDKSNVNE-----------INNENDKLVH----GNKPTKFEVGKVNRLLGQLEGKL 317

Query: 845  LSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMV 1024
            LS++MFARDTKASRNIGPPTECFV HARA E  +PC K G   K MC+ELVANRFLRKMV
Sbjct: 318  LSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDGSHMKTMCIELVANRFLRKMV 377

Query: 1025 RVLVXXXXXXXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLIP 1201
            RVLV               L+KLMD             DGLCLVDVGYT++D + CLIP
Sbjct: 378  RVLVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
          Length = 436

 Score =  447 bits (1151), Expect = e-123
 Identities = 234/419 (55%), Positives = 281/419 (67%), Gaps = 19/419 (4%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIID 178
            HTD+C   RWT+RE YEFMY R WH+V DFY D V G  SL +LFGKE   + + AEI +
Sbjct: 33   HTDSCKFSRWTSRECYEFMYARLWHKVVDFYADMVKGHTSLSRLFGKETPADHEDAEIRE 92

Query: 179  DSDKPESECVPAKGRT----GRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALG 346
            D +K E   +P K ++    GRW R  F I++SY+G SFDGWQKQP LNTVQGLVE +LG
Sbjct: 93   DHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLG 152

Query: 347  KFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAA 526
            +FVDEKKAQ+LK+K LPLE CALVAGRTDKGV+A  QVC+FYTWRKDVK  D++ AL  A
Sbjct: 153  EFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKA 212

Query: 527  APGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--------------ENEDDEVSEC 664
            APGKIRV S+++VSR+FHPNFSAKWRHY YIFP +D                +  + +EC
Sbjct: 213  APGKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDDVLGEKQRGQIWIDGSTDVHQQNEC 272

Query: 665  KKHNLDKTICHDDPYGERLREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKL 844
             K ++DK+  ++             D +++ V     G KP  FEV +VN LL QLEGKL
Sbjct: 273  GKSDIDKSNVNE-----------INDENNELVH----GNKPTKFEVGKVNRLLGQLEGKL 317

Query: 845  LSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMV 1024
            LS++MFARDTKASRNIGPPTECFV HARA E  +PC K G   K MC+ELVANRFLRKMV
Sbjct: 318  LSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDGSLMKTMCIELVANRFLRKMV 377

Query: 1025 RVLVXXXXXXXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLIP 1201
            RVLV               L+KLMD             DGLCLVDVGYT++D + CLIP
Sbjct: 378  RVLVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
            gi|508784931|gb|EOY32187.1| Pseudouridine synthase
            isoform 2 [Theobroma cacao]
          Length = 446

 Score =  445 bits (1145), Expect = e-122
 Identities = 238/410 (58%), Positives = 282/410 (68%), Gaps = 11/410 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDD 181
            H+D+CS  RWTARESY FMY R W  V DFY + VNGR +L  LFG E + +D +E ++ 
Sbjct: 47   HSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTLFGTETSIHDDSETVEV 106

Query: 182  SDKPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
            SD+        KG R+GRWERVTFKI+ISYNG +FDGWQKQP LNTVQ +VE +LG+FVD
Sbjct: 107  SDE--------KGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVD 158

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            EKKAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTWRKDVK  DIEDA+ + APGK
Sbjct: 159  EKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGK 218

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            +RV SVS+VSR FHPNFSAKWRHY YIFP +  N++ E   C+     +    D  Y E+
Sbjct: 219  LRVVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQSCENKKEVENFISDGNYNEQ 276

Query: 719  LREQTCEDGDDDYVET--------QQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDT 874
             R    E+   + VE          ++  KP  F V RVN LL QLE KLLS++MFARDT
Sbjct: 277  -RNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDT 335

Query: 875  KASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELVANRFLRKMVRVLVXXXX 1048
            KASRNIGPPTECF++HARAAEA +PC     G G +VMCVELVANRFLRKMVRVLV    
Sbjct: 336  KASRNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMCVELVANRFLRKMVRVLVATSI 395

Query: 1049 XXXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
                       L+KLM              DGLCLVDVGYTEFD + CL+
Sbjct: 396  REAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 445


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  444 bits (1141), Expect = e-122
 Identities = 229/399 (57%), Positives = 270/399 (67%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDD 181
            HT      RWTARES++FMY RPW +V DFY + V GR SL  L G E +     EI++ 
Sbjct: 28   HTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHPIHDGEIVEA 87

Query: 182  SDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDE 361
            SDK E   V  K R GRW R+TFKI++SY+G SFDGWQKQP LNTVQGLVE++LG+FVDE
Sbjct: 88   SDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDE 147

Query: 362  KKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKI 541
            +KAQ LKEK LP+EG   VAGRTDKGVTAL QVC+FYTW+KDVK  DIEDA+  AAPGK+
Sbjct: 148  RKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKL 207

Query: 542  RVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERL 721
            RV SVS+VSR FHPNFSAKWRHYFYIFP ND ++ +++SE                    
Sbjct: 208  RVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE-------------------- 247

Query: 722  REQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPP 901
                  + D   +   ++  KP TF +SRV+ LL QLEGKLLS+++FARDTKASRNIGPP
Sbjct: 248  -----NEMDIQKISFNENRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRNIGPP 302

Query: 902  TECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXX 1081
            TECFV HARA EA L     G G+KVMC+ELVANRFLRKMVRVLV               
Sbjct: 303  TECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDA 362

Query: 1082 LIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
            L+KLMD             DGLCL+DVG+TEFD + C I
Sbjct: 363  LLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 401


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  439 bits (1130), Expect = e-121
 Identities = 230/409 (56%), Positives = 278/409 (67%), Gaps = 9/409 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKE---VNTNDGAEI 172
            HTD+C   RWTARES++FM+ RPW  V DFY  +VNG+ SL +LFG +   V+ +D  E 
Sbjct: 43   HTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQAHDVHCDDKIEE 102

Query: 173  IDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKF 352
            + + +    E V    ++GRW RVTFKI++SY+G SFDGWQKQP LNTVQGLVE +LG+F
Sbjct: 103  VSN-ETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRF 161

Query: 353  VDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAP 532
            VDEKKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK  +IEDA+   AP
Sbjct: 162  VDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAP 221

Query: 533  GKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHD---- 700
            GK+RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+    +  ++    H+    
Sbjct: 222  GKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIE--GEGGIENFSSHENCEK 279

Query: 701  --DPYGERLREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDT 874
              +  GE   E+  E+      +  Q   KP +F V RVN LL QLEGKLLS++MFARDT
Sbjct: 280  QRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDT 339

Query: 875  KASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXX 1054
            KASRN+GPPTECF++HARA E  LP P    G +VMCVEL+ANRFLRKMVRVLV      
Sbjct: 340  KASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRVLVATSVRE 399

Query: 1055 XXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLIP 1201
                     L+KLMD             DGLCLVDVGYTEFD + CLIP
Sbjct: 400  AAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 448


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  437 bits (1124), Expect = e-120
 Identities = 232/417 (55%), Positives = 276/417 (66%), Gaps = 17/417 (4%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN---DGAEI 172
            HTD+C   RWTARES++FM+ RPW  V DFY  +VNG+ SL +LFG +V        A  
Sbjct: 43   HTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQVFFTMELKKAHD 102

Query: 173  IDDSDKPES--------ECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGL 328
            +   DK E         E V    ++GRW RVTFKI++SY+G SFDGWQKQP LNTVQGL
Sbjct: 103  VHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGL 162

Query: 329  VESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIE 508
            VE +LG+FVDEKKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK  +IE
Sbjct: 163  VEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIE 222

Query: 509  DALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKT 688
            DA+   APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+    +  ++  
Sbjct: 223  DAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIE--GEGGIENF 280

Query: 689  ICHD------DPYGERLREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLS 850
              H+      +  GE   E+  E+      +  Q   KP +F V RVN LL QLEGKLLS
Sbjct: 281  SSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLS 340

Query: 851  FRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRV 1030
            ++MFARDTKASRN+GPPTECF++HARA E  LP P    G +VMCVEL+ANRFLRKMVRV
Sbjct: 341  YKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRV 400

Query: 1031 LVXXXXXXXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLIP 1201
            LV               L+KLMD             DGLCLVDVGYTEFD + CLIP
Sbjct: 401  LVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 457


>ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
            gi|561033630|gb|ESW32209.1| hypothetical protein
            PHAVU_002G302500g [Phaseolus vulgaris]
          Length = 440

 Score =  436 bits (1120), Expect = e-119
 Identities = 231/400 (57%), Positives = 274/400 (68%), Gaps = 1/400 (0%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTNDGAEIID 178
            HTD     RWTARES++FMY RPW RVNDFY + V    SL  LFG + +  ++   I  
Sbjct: 53   HTDPSEYARWTARESFQFMYARPWQRVNDFYFNVVRANLSLSLLFGPQTILDHNDTGIAA 112

Query: 179  DSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
             SD+ E E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQG+VE++LGKFVD
Sbjct: 113  LSDQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGKFVD 172

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            EKK Q+LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+  AA GK
Sbjct: 173  EKKTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQAALGK 232

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            +RV SVS+VSR FHPNFSAKWRHY YIFP  +   D       + N +   C    Y E 
Sbjct: 233  LRVISVSEVSRVFHPNFSAKWRHYLYIFPLTNGYRD-------QSNSNGESCDISKYNE- 284

Query: 719  LREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGP 898
            + + + +DG    +E Q+   K + F VS+VN LL +LEGKLLS++MFARDTKASRN GP
Sbjct: 285  MHDSSSKDG----IENQE---KSYLFSVSKVNVLLRKLEGKLLSYKMFARDTKASRNDGP 337

Query: 899  PTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXX 1078
            PTECFV+HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV              
Sbjct: 338  PTECFVYHARAMEVKLPTTDCGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDD 397

Query: 1079 XLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
             LIKLMD             DGLCLVDVGYTEFD + C I
Sbjct: 398  ALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPQKCFI 437


>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
          Length = 422

 Score =  432 bits (1110), Expect = e-118
 Identities = 228/400 (57%), Positives = 271/400 (67%), Gaps = 1/400 (0%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTNDGAEIID 178
            HT      RW ARES+EFMY RPW  VNDFYL+AV G  SLP LFG + V  +D + I  
Sbjct: 35   HTHPSKYTRWNARESFEFMYARPWQLVNDFYLNAVRGNSSLPLLFGVQTVPDHDDSGISV 94

Query: 179  DSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVD 358
             SDK E E   +K R GRW R+ FKI++SY+G SFDGWQKQPSLNTVQ +VE++LGKFVD
Sbjct: 95   LSDKTELEKGVSKDRGGRWARINFKIVLSYHGESFDGWQKQPSLNTVQSVVEASLGKFVD 154

Query: 359  EKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGK 538
            E K Q+LKEK LP+EGCA VAGRTDKGVTAL QVC+FYTW+KD+   DIEDA+   APGK
Sbjct: 155  EMKTQLLKEKGLPIEGCASVAGRTDKGVTALQQVCSFYTWKKDINPRDIEDAINDGAPGK 214

Query: 539  IRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER 718
            +RV SV +VSR FHPNFSAKWR Y YIFP  DE + D+ S   + + D+ I +       
Sbjct: 215  LRVISVHEVSRAFHPNFSAKWRRYLYIFPLTDEGDKDQ-SGSNEESCDRFIYN------- 266

Query: 719  LREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGP 898
               + C+    D +E +    K + F V +VN LL +LEGKLLS++MFARDTKASRN GP
Sbjct: 267  ---EVCDSVSKDELENEM---KSYVFSVRKVNRLLQKLEGKLLSYKMFARDTKASRNDGP 320

Query: 899  PTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXX 1078
            PTECFV+HARA EA LP    G  ++VMC+ELVANRFLRKMVRVLV              
Sbjct: 321  PTECFVYHARAMEARLPTTDNG-EARVMCIELVANRFLRKMVRVLVATTIREAAAGAEDD 379

Query: 1079 XLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
             L++LMD             DGLCLVDVGY EFD+K C I
Sbjct: 380  ALLRLMDATCRRATAPPAPPDGLCLVDVGYAEFDQKKCFI 419


>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 444

 Score =  431 bits (1108), Expect = e-118
 Identities = 228/402 (56%), Positives = 269/402 (66%), Gaps = 3/402 (0%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKE---VNTNDGAEI 172
            HT      RWTARES+EFMY RPW RVNDFYL+ V    SLP LFG +   V+ ND   I
Sbjct: 55   HTHPSKYARWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLFGAQTLVVDHNDTG-I 113

Query: 173  IDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKF 352
               S   E E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQ +VE +LGKF
Sbjct: 114  AALSGSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEGSLGKF 173

Query: 353  VDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAP 532
            VDEKK Q+LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+  AAP
Sbjct: 174  VDEKKTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINHAAP 233

Query: 533  GKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYG 712
            GK+RV SVS+VSR FHPNFSAKWR Y YIFP  +    D+ S+           + + Y 
Sbjct: 234  GKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTNGGYTDQSSD-----------NGEFYD 282

Query: 713  ERLREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNI 892
                 +  +    D +E ++   K + F +S+VN LL +LEGKLLS++MFARDTKASRN 
Sbjct: 283  SFKYNEIHDSASKDELENEK---KSYAFSISKVNRLLRKLEGKLLSYKMFARDTKASRND 339

Query: 893  GPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXX 1072
            GPPTECFV+HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV            
Sbjct: 340  GPPTECFVYHARAMEVKLPATDHGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAE 399

Query: 1073 XXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
               LIKLMD             DGLCLVDVGYTEF+ + C I
Sbjct: 400  DDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFI 441


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score =  430 bits (1105), Expect = e-118
 Identities = 234/412 (56%), Positives = 276/412 (66%), Gaps = 12/412 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDD 181
            HTD+C   RWTA+ESYEFM  RPW  V DFY D V+GR +L  LFG E  T   +   D+
Sbjct: 50   HTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDLFGTE-RTRTSSIHNDE 108

Query: 182  SDKPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGK 349
            ++ PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQP LNTVQGLVE  LG 
Sbjct: 109  NEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQPDLNTVQGLVEKCLGS 168

Query: 350  FVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAA 529
            FVDEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWRKDVK  +IEDA+ +AA
Sbjct: 169  FVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWRKDVKPSEIEDAINSAA 228

Query: 530  PGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--ENEDDEVSECKKHNLDKTICHDD 703
            PGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND  + E    SE +  N   +    +
Sbjct: 229  PGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTS----N 284

Query: 704  PYGERLREQTCEDGDDDYVETQQSG----TKPFTFEVSRVNHLLHQLEGKLLSFRMFARD 871
              G+  +   C +  ++ +   + G     KP  F + RVN LL +LEGKLLS++ FARD
Sbjct: 285  NVGK--QSNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARD 342

Query: 872  TKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELVANRFLRKMVRVLVXXX 1045
            TKASRNIGPPTECF++HARA EA LPCP    G G KVMCVELVANRFLRKMVRVLV   
Sbjct: 343  TKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVELVANRFLRKMVRVLVATL 402

Query: 1046 XXXXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLIP 1201
                        L+KL+D             +GLCLVDVGYT FD +  LIP
Sbjct: 403  VREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNFDPQNSLIP 454


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
            gi|557556408|gb|ESR66422.1| hypothetical protein
            CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score =  430 bits (1105), Expect = e-118
 Identities = 234/412 (56%), Positives = 276/412 (66%), Gaps = 12/412 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDD 181
            HTD+C   RWTA+ESYEFM  RPW  V DFY D V+GR +L  LFG E  T   +   D+
Sbjct: 43   HTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDLFGTE-RTRTSSIHNDE 101

Query: 182  SDKPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGK 349
            ++ PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQP LNTVQGLVE  LG 
Sbjct: 102  NEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQPDLNTVQGLVEKCLGS 161

Query: 350  FVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAA 529
            FVDEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWRKDVK  +IEDA+ +AA
Sbjct: 162  FVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWRKDVKPSEIEDAINSAA 221

Query: 530  PGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--ENEDDEVSECKKHNLDKTICHDD 703
            PGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND  + E    SE +  N   +    +
Sbjct: 222  PGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTS----N 277

Query: 704  PYGERLREQTCEDGDDDYVETQQSG----TKPFTFEVSRVNHLLHQLEGKLLSFRMFARD 871
              G+  +   C +  ++ +   + G     KP  F + RVN LL +LEGKLLS++ FARD
Sbjct: 278  NVGK--QSNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARD 335

Query: 872  TKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELVANRFLRKMVRVLVXXX 1045
            TKASRNIGPPTECF++HARA EA LPCP    G G KVMCVELVANRFLRKMVRVLV   
Sbjct: 336  TKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVELVANRFLRKMVRVLVATL 395

Query: 1046 XXXXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLIP 1201
                        L+KL+D             +GLCLVDVGYT FD +  LIP
Sbjct: 396  VREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNFDPQNSLIP 447


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  426 bits (1096), Expect = e-117
 Identities = 231/404 (57%), Positives = 276/404 (68%), Gaps = 5/404 (1%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFG--KEVNTNDG---A 166
            H+D C   RWTARESY+FMY RPW +V DFY + VNG  S   LF   K+   +D    A
Sbjct: 43   HSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNGTTSFSSLFPLHKKYQVDDDDYDA 102

Query: 167  EIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALG 346
            EI + SD  + +   ++ R+GRW R TFK+++ Y+G SFDGWQKQP LNTVQGLVE +LG
Sbjct: 103  EIPEISDD-KVKLKKSEERSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQGLVERSLG 161

Query: 347  KFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAA 526
            +FVDEKKAQ+LK+K LPLE C +VAGRTDKGVTAL QVC+FYTWRKD+   DIE+A+  A
Sbjct: 162  RFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSFYTWRKDITCQDIEEAINNA 221

Query: 527  APGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDP 706
            A GK++  SVS+VSR FHPNFSAKWR Y YIFPFNDE ED+E S     NL+     +  
Sbjct: 222  ALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDE-EDEEQSNKNGENLETYEKIESG 280

Query: 707  YGERLREQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASR 886
             GE   +++  +   D  E  +SG KP +F VSRV+ LL  LEGKLLS++MFARDTKASR
Sbjct: 281  CGE-WNDESFGNLIIDDSEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMFARDTKASR 339

Query: 887  NIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXX 1066
            N GPPTECF++HARAAEA LP      G K+MCVELVANRFLRKMVRVLV          
Sbjct: 340  NEGPPTECFIYHARAAEARLPTSDCTEGRKIMCVELVANRFLRKMVRVLVATSIREAAAG 399

Query: 1067 XXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
                 L+KLMD             DGLCLVDVGY+EF    CLI
Sbjct: 400  AEEDALLKLMDATCRRATAPPAPPDGLCLVDVGYSEFKPNNCLI 443


>ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
            gi|462419663|gb|EMJ23926.1| hypothetical protein
            PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  424 bits (1089), Expect = e-116
 Identities = 224/411 (54%), Positives = 274/411 (66%), Gaps = 12/411 (2%)
 Frame = +2

Query: 2    HTDACSLHRWTARESYEFMYLRPWHRVNDFYLDAVNGRRSLPQLFGK----EVNTNDGAE 169
            HTD CS  RWT +E ++FM  RPW +V DFY D V  R+ L  L GK    + N N+  E
Sbjct: 11   HTDPCSFARWTTKECFQFMSARPWQQVMDFYSDVVKDRKPLSALLGKACLSKSNINNRLE 70

Query: 170  IIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGK 349
             +           P++ + GRW R+TFKI++SY+G SFDGWQ+QP LNTVQ +VE +LGK
Sbjct: 71   SLP----------PSQDKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVEKSLGK 120

Query: 350  FVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAA 529
            FVDE+KAQ+LK+K LPLEG ALVAGRTDKGVTA+ QVC+FYTWRKDVK+ DI DA+ +AA
Sbjct: 121  FVDERKAQMLKDKGLPLEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKSQDITDAINSAA 180

Query: 530  PGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPY 709
            PGK+RV SV++VSR FHPNF+AKWRHY YIFPFNDE ED E S     N       ++ +
Sbjct: 181  PGKLRVVSVTEVSRAFHPNFTAKWRHYLYIFPFNDE-EDMEQSNQSGENAQNFKSLENYH 239

Query: 710  GERLREQTCED--------GDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFA 865
              +     C +         D++ +ET     KP  F VSRVN LL +LEGKLLS++MFA
Sbjct: 240  EHKNGCDQCNEANVGNLVINDNEDLET----LKPREFTVSRVNQLLQKLEGKLLSYKMFA 295

Query: 866  RDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXX 1045
            RDTK SRN GPPTECF++HARA E+ LPC +   G +VMC+ELVANRFLR+MVRVLV   
Sbjct: 296  RDTKPSRNEGPPTECFLYHARAKESKLPCSEHEKGRRVMCIELVANRFLRRMVRVLVATS 355

Query: 1046 XXXXXXXXXXXXLIKLMDXXXXXXXXXXXXXDGLCLVDVGYTEFDKKFCLI 1198
                        L+KLMD             DGLCLVDVGY EFD + CLI
Sbjct: 356  IREAAAGADEDALLKLMDATCRRATAPPAPPDGLCLVDVGYEEFDPQDCLI 406