BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00012384
         (2374 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus...  1305   0.0  
gb|EPS67076.1| hypothetical protein M569_07699, partial [Genlise...  1291   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...  1271   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...  1271   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...  1253   0.0  
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A...  1243   0.0  
gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru...  1236   0.0  
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun...  1233   0.0  
ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su...  1229   0.0  
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su...  1229   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...  1229   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...  1229   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...  1229   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...  1229   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...  1229   0.0  
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...  1227   0.0  
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...  1226   0.0  
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1226   0.0  
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su...  1223   0.0  
gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japo...  1223   0.0  

>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
          Length = 1842

 Score = 1305 bits (3376), Expect = 0.0
 Identities = 654/689 (94%), Positives = 673/689 (97%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLK+ DFNDMYKYEID  NWNPNYMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKKSDFNDMYKYEIDNSNWNPNYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
            AVEDLKTIREIRSVFDAEV KLE DRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTF+V
Sbjct: 933  AVEDLKTIREIRSVFDAEVTKLEVDRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKV 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLS EAQKNATLFFNILLRSALASKRVLK
Sbjct: 993  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSTEAQKNATLFFNILLRSALASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAF+WV+GEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP VSKTKEKAKNVQCALEYTTLRSVTQATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1173 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EF DDLTCIFNDDNAEKLILRIRIMN++APKGE+ DES+EDDVFLKKIEGNMLTEMA
Sbjct: 1233 INTEFSDDLTCIFNDDNAEKLILRIRIMNEQAPKGELADESAEDDVFLKKIEGNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIKN K+NKFDEN+GFKAENEWMLDTEGVNLLAV+CHE+VD RRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQLAPIGTGDCAL +NE+MLKQ
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQLAPIGTGDCALLLNEQMLKQ 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSP-MGTP 2064
            AIEIPLPSYMEGGLEFGMTPGRSP  GTP
Sbjct: 1473 AIEIPLPSYMEGGLEFGMTPGRSPHSGTP 1501


>gb|EPS67076.1| hypothetical protein M569_07699, partial [Genlisea aurea]
          Length = 1171

 Score = 1291 bits (3341), Expect = 0.0
 Identities = 641/689 (93%), Positives = 671/689 (97%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 166  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 225

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLK+ DFNDMY++E D PNWNPNYMLPE
Sbjct: 226  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKKSDFNDMYRFEFDDPNWNPNYMLPE 285

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
            A+ED+K I E+RSVFDAEVQKLE DR QLGTEIAT+GDNSWPLPVNI+RLVLNAQKTF+V
Sbjct: 286  AIEDVKIIHEVRSVFDAEVQKLETDRLQLGTEIATSGDNSWPLPVNIRRLVLNAQKTFKV 345

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRRPSD++PMEIVEAVDKLQERLKVVVGDDYLS+EAQKNATLFFNILLRSALASKRVLK
Sbjct: 346  DFRRPSDIYPMEIVEAVDKLQERLKVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLK 405

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAFDWV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 406  EYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 465

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+L    SKTKE+AKNVQCALEYTTLRSVTQATEVW
Sbjct: 466  VTLGVPRLREIINVAKKIKTPSLSVYLNAEASKTKERAKNVQCALEYTTLRSVTQATEVW 525

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTIIEED+EFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 526  YDPDPMSTIIEEDIEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 585

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMA
Sbjct: 586  INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMA 645

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIKN KVN+FDE +GFKAENEWMLDTEGVNLLAV+CH DVD++RTTSNHL
Sbjct: 646  LRGIPDINKVFIKNSKVNRFDEIDGFKAENEWMLDTEGVNLLAVLCHPDVDSKRTTSNHL 705

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 706  IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 765

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAVYAETD+L+GVTENIMLGQLAPIGTGDCALY+NEEMLKQ
Sbjct: 766  DTGPMMRCSFEETVDILLDAAVYAETDHLKGVTENIMLGQLAPIGTGDCALYLNEEMLKQ 825

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIEIPLPSY +GGL+FGMTPGRSP+ GTP
Sbjct: 826  AIEIPLPSYYDGGLDFGMTPGRSPLTGTP 854


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score = 1271 bits (3290), Expect = 0.0
 Identities = 639/689 (92%), Positives = 667/689 (96%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K+  F+DMY YEID PNWNP+YMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
            AVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNSWPLPVNI+RLVLNAQKTF++
Sbjct: 933  AVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLS+EAQKNATLFFNILLRSALASKRVLK
Sbjct: 993  DFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSALASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRL+REAF+WVVGEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP V KTKE+AK VQCALEYTTLRSVTQATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTVQCALEYTTLRSVTQATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMST+IEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1173 YDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DESAEDDVFLKKIESNMLTEMA 1291

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIKN KV KFD+NEGFKAENEWMLDTEGVNLLAV+ HEDVDA RTTSNHL
Sbjct: 1292 LRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNLLAVMTHEDVDASRTTSNHL 1351

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1352 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1411

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQLAPIGTG C+LY+NEEMLKQ
Sbjct: 1412 DTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQ 1471

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIEIPLPSYMEGGLEFGMTPGRSP+ GTP
Sbjct: 1472 AIEIPLPSYMEGGLEFGMTPGRSPISGTP 1500


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score = 1271 bits (3288), Expect = 0.0
 Identities = 638/689 (92%), Positives = 667/689 (96%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K+  F+DMY YEID PNWNP+YMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
            AVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNSWPLPVNI+RLVLNAQKTF++
Sbjct: 933  AVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLS+EAQKNATLFFNILLRSALASKRVLK
Sbjct: 993  DFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSALASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRL+REAF+WVVGEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP V KTKE+AK VQCALEYTTLRSVTQATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTVQCALEYTTLRSVTQATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMST+IEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1173 YDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN+EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INVEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DESAEDDVFLKKIESNMLTEMA 1291

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIKN KV KFD+NEGFKAENEWMLDTEGVNLLAV+ HEDVDA RTTSNHL
Sbjct: 1292 LRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNLLAVMTHEDVDASRTTSNHL 1351

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1352 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1411

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQLAPIGTG C+LY+NEEMLKQ
Sbjct: 1412 DTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQ 1471

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIEIPLPSYMEGGLEFGMTPGRSP+ GTP
Sbjct: 1472 AIEIPLPSYMEGGLEFGMTPGRSPISGTP 1500


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score = 1253 bits (3243), Expect = 0.0
 Identities = 625/689 (90%), Positives = 664/689 (96%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIE+Q L+SLK+K+ +F+ ++KYEID  NWNP+YMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE R+VFDAEVQKLEADRFQLGTEIATTGDNSWP+PVN+KRL+ NAQKTF+V
Sbjct: 933  HVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKV 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPMEIVEAVDKLQERLKVV GDD +S+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP VSKTKE+AKNVQCALEYTTLRSVTQATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTIIEEDV+FVKSYYEMPDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1173 YDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK+GKVNKFDE+EGFK E EWMLDTEGVNLLAV+CHEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQLAPIGTGDCALY+N++ML+ 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQLAPIGTGDCALYLNDQMLQH 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYME GL+FGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYME-GLDFGMTPSRSPITGTP 1500


>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
            gi|548833823|gb|ERM96260.1| hypothetical protein
            AMTR_s00001p00152770 [Amborella trichopoda]
          Length = 1844

 Score = 1243 bits (3215), Expect = 0.0
 Identities = 620/689 (89%), Positives = 660/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 816  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 875

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+KR +F ++YKYEIDQ NW+P+YMLPE
Sbjct: 876  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPE 935

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE ++VFDAEVQKLEADR QLGTEI TTGDNSWP+PVN+KRL+ NAQK F+V
Sbjct: 936  HVEDLKTIREFQNVFDAEVQKLEADRHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKV 995

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPMEIVEAVDKLQERLKVV GDD +S+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 996  DLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLK 1055

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAFDWV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1056 EYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1115

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LK  V+KTKEKAKNVQCALEYTTLRSVT+ATEVW
Sbjct: 1116 VTLGVPRLREIINVAKKIKTPSLSVYLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVW 1175

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTIIEEDV+FV+SYYEMPDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1176 YDPDPMSTIIEEDVDFVRSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEK 1235

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DESSEDDVFLKKIE NMLTEMA
Sbjct: 1236 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMA 1295

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK+GK+NKFDENEGFK E EWMLDTEGVNLLAV+C+E+VDA RTTSNHL
Sbjct: 1296 LRGIPDINKVFIKSGKINKFDENEGFKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHL 1355

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVI+VLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1356 IEVIQVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1415

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAVYAE D+LRGVTENIMLGQLAPIGTGDCALY+N++ML+Q
Sbjct: 1416 DTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQ 1475

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYME G++FGMTP RSPM GTP
Sbjct: 1476 AIELQLPSYME-GMDFGMTPSRSPMTGTP 1503


>gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
          Length = 1866

 Score = 1236 bits (3197), Expect = 0.0
 Identities = 613/689 (88%), Positives = 657/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 828  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 887

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F  +++YE D   WNP YMLPE
Sbjct: 888  TVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKTEFERVFRYEFDNETWNPTYMLPE 947

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE R+VFDAEVQKLE+DR QLGTEIATTGDNSWPLPVN+KRL+ NAQKTF++
Sbjct: 948  HVEDLKTIREFRNVFDAEVQKLESDRLQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKI 1007

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRR SDMHPMEIVEA+DKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVL+
Sbjct: 1008 DFRRTSDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLE 1067

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTRE F+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1068 EYRLTREGFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1127

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAK+IKTPSLSVFLKP  SKTKE+AK VQCALEYTTLRSVTQATEVW
Sbjct: 1128 VTLGVPRLREIINVAKRIKTPSLSVFLKPEASKTKERAKTVQCALEYTTLRSVTQATEVW 1187

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTII+EDV+FV+SYYEMPDEEI+PDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1188 YDPDPMSTIIDEDVDFVRSYYEMPDEEINPDKISPWLLRIELNREMMVDKKLSMADIAEK 1247

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN+EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG++ DE++EDDVFLKKIE NMLTEM+
Sbjct: 1248 INVEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGDLTDEAAEDDVFLKKIESNMLTEMS 1307

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK+GKVNKFDEN+GFK ENEWMLDTEGVNLLAVICHEDVDA+RTTSNHL
Sbjct: 1308 LRGIPDINKVFIKHGKVNKFDENDGFKPENEWMLDTEGVNLLAVICHEDVDAKRTTSNHL 1367

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1368 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1427

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTG CALY+N+EMLK 
Sbjct: 1428 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGGCALYLNDEMLKN 1487

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYM+ GL+FGMTP RSP+ GTP
Sbjct: 1488 AIELQLPSYMD-GLDFGMTPSRSPVSGTP 1515


>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
            gi|462398589|gb|EMJ04257.1| hypothetical protein
            PRUPE_ppa000093mg [Prunus persica]
          Length = 1844

 Score = 1233 bits (3189), Expect = 0.0
 Identities = 612/689 (88%), Positives = 655/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+  + YE+D  NWNP+YML E
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKTFSYELDDENWNPDYMLHE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE R+VFDAEVQKLE DR QLGTEIA TGDNSWPLPVN+KRL+ NAQKTF++
Sbjct: 933  HVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRR SDMHPMEIVEA+DKLQERLKVV GDD LS+EAQKNATLFF+ILLRS  ASKRVL 
Sbjct: 993  DFRRTSDMHPMEIVEAIDKLQERLKVVPGDDLLSVEAQKNATLFFSILLRSTFASKRVLD 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAK+IKTPSLSV+LKP  +KTKE+AKNVQCALEYTTLRSVTQATEVW
Sbjct: 1113 VTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTIIEEDV+FV SYYEMPDEE++PDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1173 YDPDPMSTIIEEDVDFVNSYYEMPDEEVNPDKISPWLLRIELNREMMVDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGELVDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK+GKVNKFD NEGFKAE EWMLDTEGVNLLAV+CH+DVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKHGKVNKFDPNEGFKAEQEWMLDTEGVNLLAVLCHDDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IE++E+LGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AETDYLRGVTENIMLGQLAPIGTGDCALY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYM+ GL+FGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYMD-GLDFGMTPSRSPVSGTP 1500


>ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
            X2 [Setaria italica]
          Length = 1852

 Score = 1229 bits (3181), Expect = 0.0
 Identities = 606/689 (87%), Positives = 659/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+++++YE+D  NW PNYMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             V+DLKTIRE R+VF+AEVQKLEADRFQLGTEI TTGDNSWP+PVN+KRL+ NAQKTF++
Sbjct: 933  HVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP V+K KE AKNVQCALEYTTLRSVT ATE+W
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDP+ TIIEEDVEFV+SYYEMPDE+IDPDKISPWLLRIELNREMM+DKKLSMADIAEK
Sbjct: 1173 YDPDPLGTIIEEDVEFVRSYYEMPDEDIDPDKISPWLLRIELNREMMIDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDL+CIFNDDNA+KLILRIRI ND+APKGE+ DES+EDDVFLKKIEGNMLTEMA
Sbjct: 1233 INREFDDDLSCIFNDDNADKLILRIRITNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK+GKVNKFD++EGFKA+NEWMLDTEGVNLLAV+CHEDVDA RTTSNHL
Sbjct: 1293 LRGIPDINKVFIKHGKVNKFDQSEGFKADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGP+MRCSFEETVDILLDAAVYAE D LRGVTENIMLGQLAPIGTG CALY+N++ML+Q
Sbjct: 1413 DTGPLMRCSFEETVDILLDAAVYAEADLLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQ 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSY+E GL+FGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYVE-GLDFGMTPARSPISGTP 1500


>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
            X1 [Setaria italica]
          Length = 1852

 Score = 1229 bits (3181), Expect = 0.0
 Identities = 606/689 (87%), Positives = 659/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+++++YE+D  NW PNYMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             V+DLKTIRE R+VF+AEVQKLEADRFQLGTEI TTGDNSWP+PVN+KRL+ NAQKTF++
Sbjct: 933  HVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP V+K KE AKNVQCALEYTTLRSVT ATE+W
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDP+ TIIEEDVEFV+SYYEMPDE+IDPDKISPWLLRIELNREMM+DKKLSMADIAEK
Sbjct: 1173 YDPDPLGTIIEEDVEFVRSYYEMPDEDIDPDKISPWLLRIELNREMMIDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDL+CIFNDDNA+KLILRIRI ND+APKGE+ DES+EDDVFLKKIEGNMLTEMA
Sbjct: 1233 INREFDDDLSCIFNDDNADKLILRIRITNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK+GKVNKFD++EGFKA+NEWMLDTEGVNLLAV+CHEDVDA RTTSNHL
Sbjct: 1293 LRGIPDINKVFIKHGKVNKFDQSEGFKADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGP+MRCSFEETVDILLDAAVYAE D LRGVTENIMLGQLAPIGTG CALY+N++ML+Q
Sbjct: 1413 DTGPLMRCSFEETVDILLDAAVYAEADLLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQ 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSY+E GL+FGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYVE-GLDFGMTPARSPISGTP 1500


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 608/689 (88%), Positives = 659/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+  +++E+D+ NWNPNYML E
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+V
Sbjct: 933  YIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKV 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            E+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSVFLKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEK
Sbjct: 1173 YDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYME GLEFGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYME-GLEFGMTPARSPVSGTP 1500


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 608/689 (88%), Positives = 659/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+  +++E+D+ NWNPNYML E
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+V
Sbjct: 933  YIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKV 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            E+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSVFLKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEK
Sbjct: 1173 YDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYME GLEFGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYME-GLEFGMTPARSPVSGTP 1500


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 608/689 (88%), Positives = 659/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+  +++E+D+ NWNPNYML E
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+V
Sbjct: 933  YIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKV 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            E+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSVFLKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEK
Sbjct: 1173 YDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYME GLEFGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYME-GLEFGMTPARSPVSGTP 1500


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 608/689 (88%), Positives = 659/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+  +++E+D+ NWNPNYML E
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+V
Sbjct: 933  YIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKV 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            E+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSVFLKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEK
Sbjct: 1173 YDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYME GLEFGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYME-GLEFGMTPARSPVSGTP 1500


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 608/689 (88%), Positives = 659/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+  +++E+D+ NWNPNYML E
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+V
Sbjct: 933  YIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKV 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            E+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSVFLKPGV+ TKE+AKNVQCALEYTTLRSVT+ATEVW
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNVQCALEYTTLRSVTEATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPM TIIEEDVEFVKSYYEMPDE+I P+KISPWLLRIELNREMMVDKKLSMA +AEK
Sbjct: 1173 YDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIELNREMMVDKKLSMAAVAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GK  K+D+NEGFK+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAV+AE+DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSYME GLEFGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYME-GLEFGMTPARSPVSGTP 1500


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
            brachyantha]
          Length = 1855

 Score = 1227 bits (3174), Expect = 0.0
 Identities = 605/689 (87%), Positives = 657/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+ +++YE+D  NW PNYMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDTVFRYELDDENWRPNYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE R+VF+AEVQKLEADRFQLGTEIATTGDN+WP+PVN+KRL+ NAQKTF++
Sbjct: 933  HVEDLKTIREFRNVFEAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 993  DLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP V+K KE AKNVQCALEYTTLRSVT ATE+W
Sbjct: 1113 VTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDP+ TIIEEDVEFV+SYYEMPDE++DPDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1173 YDPDPLGTIIEEDVEFVRSYYEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDL+CIFNDDNA+KLILR+RI NDEAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INHEFDDDLSCIFNDDNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GKVNKF++N+GFK +NEWMLDTEGVNLLAV+CHEDVDA RTTSNHL
Sbjct: 1293 LRGIPDINKVFIKYGKVNKFEDNDGFKPDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGP+MRCSFEETVDILLDAAVYAE+DYLRGVTENIMLGQLAPIGTG CALY+N++ML+Q
Sbjct: 1413 DTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQ 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSY+E GL+FGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYVE-GLDFGMTPARSPISGTP 1500


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score = 1226 bits (3171), Expect = 0.0
 Identities = 611/689 (88%), Positives = 655/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F  +++YE +  NW PNYMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE R+VF+AEVQKLEADR+QLGTEIATTG+NSWP+PVN+KRL+ NAQKTF++
Sbjct: 933  HVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRR SDMHPMEIVEA+DKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVL 
Sbjct: 993  DFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLD 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAK+IKTPSLSV+LKP  +KTKE+AK VQCALEYTTLRSVTQATEVW
Sbjct: 1113 VTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTIIEED++FVKSYYEMPDEEI P+KISPWLLRIELNREMMVDKKLSMA+IAEK
Sbjct: 1173 YDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GKVNKFDENEGFK E EWMLDTEGVNLLAV+ HEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQLAPIGTG CALY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSY++ GL+FGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYID-GLDFGMTPSRSPISGTP 1500


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score = 1226 bits (3171), Expect = 0.0
 Identities = 611/689 (88%), Positives = 655/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 813  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 872

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F  +++YE +  NW PNYMLPE
Sbjct: 873  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPE 932

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE R+VF+AEVQKLEADR+QLGTEIATTG+NSWP+PVN+KRL+ NAQKTF++
Sbjct: 933  HVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKI 992

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRR SDMHPMEIVEA+DKLQERLKVV G+D LS+EAQKNATLFFNILLRS  ASKRVL 
Sbjct: 993  DFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLD 1052

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1053 EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1112

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAK+IKTPSLSV+LKP  +KTKE+AK VQCALEYTTLRSVTQATEVW
Sbjct: 1113 VTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVW 1172

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMSTIIEED++FVKSYYEMPDEEI P+KISPWLLRIELNREMMVDKKLSMA+IAEK
Sbjct: 1173 YDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEK 1232

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 1233 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMA 1292

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GKVNKFDENEGFK E EWMLDTEGVNLLAV+ HEDVDARRTTSNHL
Sbjct: 1293 LRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHL 1352

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1353 IEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1412

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQLAPIGTG CALY+N+EMLK 
Sbjct: 1413 DTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKN 1472

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSY++ GL+FGMTP RSP+ GTP
Sbjct: 1473 AIELQLPSYID-GLDFGMTPSRSPISGTP 1500


>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
            vesca subsp. vesca]
          Length = 1842

 Score = 1223 bits (3165), Expect = 0.0
 Identities = 604/689 (87%), Positives = 654/689 (94%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 811  ESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 870

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+  + Y  D  NWNP+YMLPE
Sbjct: 871  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFDKTFAYVFDDENWNPDYMLPE 930

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             VEDLKTIRE R+VFDAEV KLE DR QLGTEIA TGDNSWPLPVN+KRL+ NAQKTF++
Sbjct: 931  HVEDLKTIREFRNVFDAEVSKLETDRLQLGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKI 990

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            DFRR SDMHPMEIVEA+DKLQERL+VV GDD LS+EAQKNATLFFNILLRS  ASKRVL+
Sbjct: 991  DFRRTSDMHPMEIVEAIDKLQERLRVVPGDDLLSVEAQKNATLFFNILLRSTFASKRVLE 1050

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 1051 EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 1110

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAK+IKTPSLSV+LKP  +KTKE+AKNVQCALEYTTLRSVTQATEVW
Sbjct: 1111 VTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEVW 1170

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDPMST+IEED++FV+SYYEMPDEE++PDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 1171 YDPDPMSTLIEEDLDFVRSYYEMPDEEVNPDKISPWLLRIELNREMMVDKKLSMADIAEK 1230

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            INLEFD DLTCIFNDDNAEKLILRIRIMN+E PKG+  DES+EDDVFLKKIE NMLTEMA
Sbjct: 1231 INLEFDGDLTCIFNDDNAEKLILRIRIMNEETPKGDSQDESAEDDVFLKKIESNMLTEMA 1290

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK+GKVNKFD+NEGFKAE EWMLDTEGVNLLAV+CH+DVDA+RTTSNHL
Sbjct: 1291 LRGIPDINKVFIKHGKVNKFDQNEGFKAEQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHL 1350

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IE+IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1351 IEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1410

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGPMMRCSFEETVDILLDA+V+AETD+LRGVTENIMLGQLAPIGTGDCALY+N+EMLK 
Sbjct: 1411 DTGPMMRCSFEETVDILLDASVFAETDHLRGVTENIMLGQLAPIGTGDCALYLNDEMLKN 1470

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSY++ GL+FGMTP RSP+ GTP
Sbjct: 1471 AIELQLPSYVD-GLDFGMTPSRSPVSGTP 1498


>gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japonica Group]
          Length = 1526

 Score = 1223 bits (3165), Expect = 0.0
 Identities = 604/689 (87%), Positives = 657/689 (95%), Gaps = 1/689 (0%)
 Frame = +1

Query: 1    ESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 180
            ESRGFVENSYLRGL+PQEFFFHAMGGRE LIDTAVKTSETGYIQRRLVKAMEDIMVKYDG
Sbjct: 484  ESRGFVENSYLRGLTPQEFFFHAMGGRESLIDTAVKTSETGYIQRRLVKAMEDIMVKYDG 543

Query: 181  TVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPE 360
            TVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+++++YE+D  NW PNYMLPE
Sbjct: 544  TVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPE 603

Query: 361  AVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRV 540
             V+DLKTIRE R+VF+AEVQKLEADRFQLG+EIATTGDN+WP+PVN+KRL+ NAQKTF++
Sbjct: 604  HVDDLKTIREFRNVFEAEVQKLEADRFQLGSEIATTGDNTWPMPVNLKRLIWNAQKTFKI 663

Query: 541  DFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLK 720
            D RRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS  ASKRVLK
Sbjct: 664  DLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLK 723

Query: 721  EYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 900
            EYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN
Sbjct: 724  EYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKN 783

Query: 901  VTLGVPRLREIINVAKKIKTPSLSVFLKPGVSKTKEKAKNVQCALEYTTLRSVTQATEVW 1080
            VTLGVPRLREIINVAKKIKTPSLSV+LKP V+K KE AKNVQCALEYTTLRSVT ATE+W
Sbjct: 784  VTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIW 843

Query: 1081 YDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 1260
            YDPDP+ TIIEEDVEFV+SYYEMPDE+IDPDKISPWLLRIELNREMMVDKKLSMADIAEK
Sbjct: 844  YDPDPLGTIIEEDVEFVRSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEK 903

Query: 1261 INLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMA 1440
            IN EFDDDL+CIFNDDNA+KLILR+RI NDEAPKGE+ DES+EDDVFLKKIE NMLTEMA
Sbjct: 904  INHEFDDDLSCIFNDDNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIESNMLTEMA 963

Query: 1441 LRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHL 1620
            LRGIPDINKVFIK GKVNKF++N GFKA+NEWMLDTEGVNLLAV+CHEDVDA RTTSNHL
Sbjct: 964  LRGIPDINKVFIKYGKVNKFEDNVGFKADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHL 1023

Query: 1621 IEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1800
            IEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN
Sbjct: 1024 IEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRN 1083

Query: 1801 DTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQ 1980
            DTGP+MRCSFEETVDILLDAAVYAE+DYLRGVTENIMLGQLAPIGTG CALY+N++ML+Q
Sbjct: 1084 DTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQ 1143

Query: 1981 AIEIPLPSYMEGGLEFGMTPGRSPM-GTP 2064
            AIE+ LPSY+E GL+FGMTP RSP+ GTP
Sbjct: 1144 AIELQLPSYVE-GLDFGMTPARSPISGTP 1171