BLASTX nr result
ID: Mentha26_contig00012096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00012096
(344 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus... 119 4e-25
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 103 2e-20
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 103 2e-20
gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RP... 95 1e-17
gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta] 95 1e-17
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 94 1e-17
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 94 1e-17
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 92 1e-16
ref|XP_006478838.1| PREDICTED: DNA-directed RNA polymerases II, ... 91 1e-16
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 91 1e-16
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 90 3e-16
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 89 5e-16
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 89 5e-16
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I... 88 1e-15
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ... 88 1e-15
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8... 88 1e-15
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 88 1e-15
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 87 2e-15
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 87 2e-15
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I... 86 4e-15
>gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus guttatus]
Length = 145
Score = 119 bits (298), Expect = 4e-25
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADKFDYVMQGKLYRISEESREKQVKADI+VSFGGLLM LKGDPSIAARFELDQKLFILIR
Sbjct: 84 ADKFDYVMQGKLYRISEESREKQVKADIFVSFGGLLMQLKGDPSIAARFELDQKLFILIR 143
Query: 162 KV 157
KV
Sbjct: 144 KV 145
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 103 bits (257), Expect = 2e-20
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADKF+YVM GKLYRISEE K VKADI+VSFGGLLM L+GDPSIAA+FELDQK+F+LIR
Sbjct: 84 ADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIR 143
Query: 162 KV 157
KV
Sbjct: 144 KV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 103 bits (257), Expect = 2e-20
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADKF+YVM GKLYRISEE K VKADI+VSFGGLLM L+GDPSIAA+FELDQK+F+LIR
Sbjct: 84 ADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIR 143
Query: 162 KV 157
KV
Sbjct: 144 KV 145
>gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RPB8, partial [Manihot
esculenta]
Length = 110
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADK++Y+M GKLY+ISEE K VKA+IYVS+GGLLMMLKGDPS + FELDQ+LF+LIR
Sbjct: 49 ADKYEYIMHGKLYKISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIR 108
Query: 162 KV 157
K+
Sbjct: 109 KL 110
>gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta]
Length = 96
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADK++Y+M GKLY+ISEE K VKA+IYVS+GGLLMMLKGDPS + FELDQ+LF+LIR
Sbjct: 35 ADKYEYIMHGKLYKISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIR 94
Query: 162 KV 157
K+
Sbjct: 95 KL 96
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/63 (76%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILI 166
ADKFDYVM GKLY+ISE+S Q K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LI
Sbjct: 334 ADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLI 393
Query: 165 RKV 157
RKV
Sbjct: 394 RKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/63 (76%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILI 166
ADKFDYVM GKLY+ISE+S Q K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LI
Sbjct: 129 ADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLI 188
Query: 165 RKV 157
RKV
Sbjct: 189 RKV 191
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 91.7 bits (226), Expect = 1e-16
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILI 166
ADK+DYVM GKLY+ISE+ Q K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LI
Sbjct: 84 ADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLLMMLKGDPSTAANFELDQRLFLLI 143
Query: 165 RKV 157
RKV
Sbjct: 144 RKV 146
>ref|XP_006478838.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Citrus sinensis]
Length = 153
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/62 (66%), Positives = 53/62 (85%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADKFDY+MQGK+YRISEE VKA+IYVSFGGLLM+LKG+PS + F+LDQ+LF+ +R
Sbjct: 92 ADKFDYIMQGKIYRISEEGSGANVKAEIYVSFGGLLMLLKGNPSYVSEFDLDQRLFLCMR 151
Query: 162 KV 157
++
Sbjct: 152 RL 153
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/62 (66%), Positives = 53/62 (85%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
AD ++YVMQGKLY+ISE++ + K +IY SFGGLLM+L+GDPS AA FELDQ+LF+L+R
Sbjct: 84 ADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQRLFLLMR 143
Query: 162 KV 157
KV
Sbjct: 144 KV 145
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/65 (69%), Positives = 52/65 (80%), Gaps = 3/65 (4%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQ---VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFI 172
ADK+DYVM GKLY+ISE++ K K +IY SFGGLLM+LKGDPS AA ELDQKLF+
Sbjct: 84 ADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGGLLMLLKGDPSSAANLELDQKLFL 143
Query: 171 LIRKV 157
LIRKV
Sbjct: 144 LIRKV 148
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
Length = 146
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADK++Y+M GKL++I +E K +KA+IYVS+GGLLMMLKGDPS + FELDQ+LF+L+R
Sbjct: 85 ADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLLMR 144
Query: 162 KV 157
K+
Sbjct: 145 KL 146
>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
gi|241917379|gb|EER90523.1| hypothetical protein
SORBIDRAFT_01g001420 [Sorghum bicolor]
Length = 145
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/62 (64%), Positives = 52/62 (83%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
AD ++YVM GKLY+ISE++ + K +IY SFGGLLM+L+GDPS AA FELDQ+LF+L+R
Sbjct: 84 ADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQRLFLLMR 143
Query: 162 KV 157
KV
Sbjct: 144 KV 145
>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 144
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILI 166
ADK+DYVM GKLY+ISE+S Q K +IY SFGGLLM+LKGDPS AA ELDQ+LF+L+
Sbjct: 82 ADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLLMLLKGDPSSAANLELDQRLFLLM 141
Query: 165 RKV 157
RKV
Sbjct: 142 RKV 144
>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
[Zea mays]
Length = 146
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/63 (66%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILI 166
AD ++YVMQGKLY+ISE++ Q K ++Y SFGGLLM+L+GDPS AA FELDQ+LF+LI
Sbjct: 84 ADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLLMLLRGDPSTAASFELDQRLFLLI 143
Query: 165 RKV 157
RKV
Sbjct: 144 RKV 146
>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 1 [Zea mays]
gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 2 [Zea mays]
gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 3 [Zea mays]
gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 4 [Zea mays]
Length = 146
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/63 (66%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQ-VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILI 166
AD ++YVMQGKLY+ISE++ Q K ++Y SFGGLLM+L+GDPS AA FELDQ+LF+LI
Sbjct: 84 ADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLLMLLRGDPSTAASFELDQRLFLLI 143
Query: 165 RKV 157
RKV
Sbjct: 144 RKV 146
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISE--ESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFIL 169
ADK++YVM GKLY+ISE E+ + K ++Y SFGGLLMMLKGDPS AA FELDQ+LF+L
Sbjct: 84 ADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGLLMMLKGDPSSAANFELDQRLFLL 143
Query: 168 IRKV 157
+RKV
Sbjct: 144 MRKV 147
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADKF+YVM GKLY+ISEE VK IYVSFGGLLMML GDP+ A+ +LDQ++F+LIR
Sbjct: 84 ADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSGDPANTAKLDLDQRVFLLIR 143
Query: 162 KV 157
KV
Sbjct: 144 KV 145
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIR 163
ADK++Y+M GKLY+ISEE K VKA++ VS+GGLLM+L+GDPS + FELDQ+LF+L+R
Sbjct: 85 ADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLRGDPSHVSHFELDQRLFLLMR 144
Query: 162 KV 157
K+
Sbjct: 145 KL 146
>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 146
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/63 (68%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -3
Query: 342 ADKFDYVMQGKLYRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILI 166
ADK+DYVM GKLY+ISE+S Q K + Y SFGGLLM+LKGDPS AA ELDQ+LF+L+
Sbjct: 84 ADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLLMLLKGDPSSAANLELDQRLFLLM 143
Query: 165 RKV 157
RKV
Sbjct: 144 RKV 146