BLASTX nr result

ID: Mentha26_contig00010318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00010318
         (304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU26363.1| hypothetical protein MIMGU_mgv1a014578mg [Mimulus...   101   1e-19
ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloro...    73   4e-11
ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloro...    66   4e-09
ref|XP_007021565.1| 30S ribosomal protein S20 isoform 3 [Theobro...    63   4e-08
ref|XP_007021564.1| 30S ribosomal protein S20 isoform 2 [Theobro...    63   4e-08
ref|XP_007021563.1| 30S ribosomal protein S20 isoform 1 [Theobro...    63   4e-08
ref|XP_007212118.1| hypothetical protein PRUPE_ppa012008mg [Prun...    59   7e-07

>gb|EYU26363.1| hypothetical protein MIMGU_mgv1a014578mg [Mimulus guttatus]
          Length = 185

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/83 (68%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 MAAAMTPCVSCYGLTAKMKTLSLSTAPNAAAFKPLSFSSNASTVGLFSRGLVSVCPVQLS 69
           MAA+M  CVS   L AK+K+LSL+   N+A+FKPLSFSSNAS+  LFS GL S  PVQ S
Sbjct: 1   MAASMAQCVSSLYLPAKLKSLSLTGTANSASFKPLSFSSNASSANLFSTGLASGRPVQSS 60

Query: 68  PNRRSIVCE-VGTKKADSAAKRA 3
           PNRRSIVCE V TKK DSAAKRA
Sbjct: 61  PNRRSIVCEAVTTKKPDSAAKRA 83


>ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
           lycopersicum]
          Length = 184

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 SCYGLTAKMKTLSLSTAPNAAAFKPLSFSSNASTVGLFSRGLVSVCPVQLSPNRRSIVCE 42
           SC   + K  TLSL+  P+A AF+ LSFS+N S + LFS+G VSV PVQ+ P RRSIVCE
Sbjct: 9   SCLSFSTKFNTLSLN-GPHADAFRSLSFSANTS-LNLFSKGTVSVNPVQM-PFRRSIVCE 65

Query: 41  VG-TKKADSAAKRA 3
              TKKADSAAKRA
Sbjct: 66  AAPTKKADSAAKRA 79


>ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
           tuberosum]
          Length = 184

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 SCYGLTAKMKTLSLSTAPNAAAFKPLSFSSNASTVGLFSRGLVSVCPVQLSPNRRSIVCE 42
           SC   T K  TLSL+   +A AF+ LSF +N S + LFS+G VS+ PVQ+ P RRSIVCE
Sbjct: 9   SCLIFTTKFNTLSLNGL-HADAFRSLSFCANTS-LNLFSKGTVSLNPVQM-PFRRSIVCE 65

Query: 41  VG-TKKADSAAKRA 3
              TKKADSAAKRA
Sbjct: 66  AAPTKKADSAAKRA 79


>ref|XP_007021565.1| 30S ribosomal protein S20 isoform 3 [Theobroma cacao]
           gi|508721193|gb|EOY13090.1| 30S ribosomal protein S20
           isoform 3 [Theobroma cacao]
          Length = 186

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 12/94 (12%)
 Frame = -3

Query: 248 MAAAMTPCVS--CYGLTAKMKTLSLSTAP---------NAAAFKPLSFSSNASTVGLFSR 102
           MA+A+  C+S  C+ L +K+K+LSL  +          N++AFK LSFS++ S    FS+
Sbjct: 1   MASAVNCCLSSSCFTLQSKLKSLSLRNSADSSSYALHQNSSAFKTLSFSNSLSH-NFFSK 59

Query: 101 GLVSVCPVQLSPNRRSIVCEVG-TKKADSAAKRA 3
           G +S+  +  +P RR++VCE    KKADSAAKRA
Sbjct: 60  GSLSISTMTQNPIRRTVVCEAAPKKKADSAAKRA 93


>ref|XP_007021564.1| 30S ribosomal protein S20 isoform 2 [Theobroma cacao]
           gi|508721192|gb|EOY13089.1| 30S ribosomal protein S20
           isoform 2 [Theobroma cacao]
          Length = 131

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 12/94 (12%)
 Frame = -3

Query: 248 MAAAMTPCVS--CYGLTAKMKTLSLSTAP---------NAAAFKPLSFSSNASTVGLFSR 102
           MA+A+  C+S  C+ L +K+K+LSL  +          N++AFK LSFS++ S    FS+
Sbjct: 1   MASAVNCCLSSSCFTLQSKLKSLSLRNSADSSSYALHQNSSAFKTLSFSNSLSH-NFFSK 59

Query: 101 GLVSVCPVQLSPNRRSIVCEVG-TKKADSAAKRA 3
           G +S+  +  +P RR++VCE    KKADSAAKRA
Sbjct: 60  GSLSISTMTQNPIRRTVVCEAAPKKKADSAAKRA 93


>ref|XP_007021563.1| 30S ribosomal protein S20 isoform 1 [Theobroma cacao]
           gi|508721191|gb|EOY13088.1| 30S ribosomal protein S20
           isoform 1 [Theobroma cacao]
          Length = 193

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 12/94 (12%)
 Frame = -3

Query: 248 MAAAMTPCVS--CYGLTAKMKTLSLSTAP---------NAAAFKPLSFSSNASTVGLFSR 102
           MA+A+  C+S  C+ L +K+K+LSL  +          N++AFK LSFS++ S    FS+
Sbjct: 1   MASAVNCCLSSSCFTLQSKLKSLSLRNSADSSSYALHQNSSAFKTLSFSNSLSH-NFFSK 59

Query: 101 GLVSVCPVQLSPNRRSIVCEVG-TKKADSAAKRA 3
           G +S+  +  +P RR++VCE    KKADSAAKRA
Sbjct: 60  GSLSISTMTQNPIRRTVVCEAAPKKKADSAAKRA 93


>ref|XP_007212118.1| hypothetical protein PRUPE_ppa012008mg [Prunus persica]
           gi|462407983|gb|EMJ13317.1| hypothetical protein
           PRUPE_ppa012008mg [Prunus persica]
          Length = 187

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
 Frame = -3

Query: 248 MAAAMTPCVSCYGLTAKMKTLSLSTAPNAAA-------FKPLSFSSNASTVGLFSRGLVS 90
           MAAA+    SC  L +K+  LSL+    ++A       F  LSFS++ S    FS+G  S
Sbjct: 1   MAAAVHCLSSCLALPSKLSNLSLNGPSTSSATHSTSTHFTSLSFSASLSH-NFFSKGYFS 59

Query: 89  VCPVQLSPNRRSIVCEVGT-KKADSAAKRA 3
           + PVQ  P RRS+VCEV T KK DSA KRA
Sbjct: 60  LSPVQ-RPTRRSVVCEVATTKKPDSAEKRA 88


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