BLASTX nr result
ID: Mentha26_contig00009598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00009598
(2755 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus... 1353 0.0
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1310 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1310 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1305 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1303 0.0
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 1303 0.0
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 1301 0.0
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 1297 0.0
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1293 0.0
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 1273 0.0
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 1269 0.0
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1261 0.0
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 1260 0.0
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 1260 0.0
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 1259 0.0
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 1252 0.0
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 1249 0.0
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 1248 0.0
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 1247 0.0
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1245 0.0
>gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus]
Length = 983
Score = 1353 bits (3503), Expect = 0.0
Identities = 658/822 (80%), Positives = 715/822 (86%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE AAKEYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LCK+ +AP
Sbjct: 162 WENAAKEYQELLEDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAP 221
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
YFDQLPA+MMAVITMHKLM LLMTGG RV+QAA H+GEAIEHEVRIHKFL+ KRK
Sbjct: 222 YFDQLPAEMMAVITMHKLMGLLMTGGGNGSARVVQAACHIGEAIEHEVRIHKFLDNCKRK 281
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NALNRT +E DP AKEQ+RL VR IV QDDLK WGQ+AQ+KVGC
Sbjct: 282 NALNRTSEEGPDPEAKEQDRLRKKVKILMKKQKVQQVRNIVRHQDDLKPWGQDAQVKVGC 341
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
RLIQIL TAYIQPP+DQ +D PDIRPAFVH LK VET K S+RYGVIECDP+VRKG+E
Sbjct: 342 RLIQILTQTAYIQPPVDQRDDGAPDIRPAFVHTLKCVETLKGSRRYGVIECDPLVRKGME 401
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPPLNWTGYERGAYLFLPSY+MRTHGA+QQREAVK+ P+++LEP+F
Sbjct: 402 KTARHMVIPYMPMLVPPLNWTGYERGAYLFLPSYMMRTHGAKQQREAVKRTPKQELEPIF 461
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+ALNTLGNTKWRVNKRILSV+DRIWANGG+LADLVDR EIKKW+W
Sbjct: 462 QALNTLGNTKWRVNKRILSVVDRIWANGGRLADLVDREDLPLPEEPDTEDEAEIKKWKWK 521
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VKAVKK NSERHSQRCD ELKL VARK+K+EEGFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 522 VKAVKKVNSERHSQRCDIELKLAVARKIKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 581
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEFAEGRPLGKSGL W+K+ LAN+YGGGVDK SY+GR+SFTEN++EDIFDSADRPL
Sbjct: 582 CRGILEFAEGRPLGKSGLQWLKVHLANLYGGGVDKFSYDGRISFTENHMEDIFDSADRPL 641
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EG+RWWLGAEDPFQCLATC+SL EALRSP PE+ +S++PVHQDGSCNGLQHYAALGRDKL
Sbjct: 642 EGKRWWLGAEDPFQCLATCMSLTEALRSPYPESTVSYIPVHQDGSCNGLQHYAALGRDKL 701
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DAA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 702 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPADDPNVMRARLLINQVDRKLVKQT 761
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIKRRLKER +++DD+E+FACACYAAKTTLTALGEMFEAARSIM
Sbjct: 762 VMTSVYGVTYIGARDQIKRRLKERASMEDDTELFACACYAAKTTLTALGEMFEAARSIMS 821
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIA EN PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 822 WLGDCAKIIATENHPVRWTTPLGLPVVQPYRKLGRHMIKTSLQVLTLQRETDKVMAKRQR 881
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA ACS+AGL FAGVHDSYWTHACDVD MN+ILREKFVELYE
Sbjct: 882 TAFPPNFVHSLDGSHMMMTAIACSEAGLSFAGVHDSYWTHACDVDKMNEILREKFVELYE 941
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FPKLKFP LPERGDFDL+EVL STYFFN
Sbjct: 942 APILENLLDGFQQSFPKLKFPPLPERGDFDLREVLDSTYFFN 983
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 993
Score = 1310 bits (3390), Expect = 0.0
Identities = 638/822 (77%), Positives = 708/822 (86%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPL+DAIAAEQ+LC + +AP
Sbjct: 173 WEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAYAP 232
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
+FDQLPA+MMAVITMHKLM LLMTGG RV+QAA H+GEAIEHE RIH+FLE +K K
Sbjct: 233 FFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTK-K 291
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NAL+ + +E KE+ERL VR+IV +QDD K WGQ+ +KVGC
Sbjct: 292 NALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGC 351
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
RLIQIL++TAYIQPP DQ+ED PPDIRPAF+H LK+V+T K S+RYGVI+CDP+VRKGL+
Sbjct: 352 RLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTVDTVKGSRRYGVIQCDPLVRKGLD 411
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPP NW+GY+RGAYLFLPSYIMRTHGA+QQREAVK+ P++QLEPVF
Sbjct: 412 KTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 471
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+AL+TLGNTKWRVNKR+L ++DRIWA+GG+LADLVDR EIKKW+W
Sbjct: 472 QALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTENEEEIKKWKWK 531
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VKA KKEN ERHSQRCD ELKL VARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 532 VKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 591
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEF+EGRPLGKSGL W+KI LANVYGGGVDKLS EGR +F+EN++EDIFDSADRPL
Sbjct: 592 CRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAFSENHVEDIFDSADRPL 651
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EGRRWWLGAEDPFQCLATC+S++EALRSP+PET ISHMP+HQDGSCNGLQHYAALGRDKL
Sbjct: 652 EGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKL 711
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 712 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQT 771
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIKRRLKER AI+DD+E+FA ACYAAKTTLTALGEMFEAARSIM
Sbjct: 772 VMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 831
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 832 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 891
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA AC +AGL FAGVHDSYWTHA DVD MN+ILREKFVELY+
Sbjct: 892 TAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYD 951
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 952 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 1310 bits (3389), Expect = 0.0
Identities = 636/822 (77%), Positives = 708/822 (86%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC + +AP
Sbjct: 173 WEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAP 232
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
+FDQLPA+MMAVITMHKLM LLMTGG RV+QAA H+GEAIEHE RIH+FLE +K K
Sbjct: 233 FFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTK-K 291
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NAL+ + +E KE+ERL VR+IV +QDD K WGQ+ +KVGC
Sbjct: 292 NALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGC 351
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
+LIQIL++TAYIQPP DQ++D PPDIRPAF+H LK+VET K S+RYGVI+CDP+VRKGL+
Sbjct: 352 KLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTVETVKGSRRYGVIQCDPLVRKGLD 411
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPP NW+GY+RGAYLFLPSYIMRTHGA+QQREAVK+ P++QLEPVF
Sbjct: 412 KTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 471
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+AL+TLGNTKWRVNKR+L ++DRIWA+GG+LADLVDR EIKKW+W
Sbjct: 472 QALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTEDEEEIKKWKWK 531
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VKA KKEN ERHSQRCD ELKL VARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 532 VKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 591
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEF+EGRPLGKSGL W+KI LANVYGGGVDKLSYEGR +F+EN++EDIFDSADRPL
Sbjct: 592 CRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSADRPL 651
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EGRRWWLGAEDPFQCLATC++++EALRSP+PET ISHMP+HQDGSCNGLQHYAALGRDKL
Sbjct: 652 EGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKL 711
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 712 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQT 771
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIKRRLKER AI+DD+E+F+ ACYAAKTTLTALGEMFEAARSIM
Sbjct: 772 VMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAARSIMS 831
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 832 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 891
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA C +AGL FAGVHDSYWTHA DVD MN+ILREKFVELY+
Sbjct: 892 TAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYD 951
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 952 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1305 bits (3377), Expect = 0.0
Identities = 631/822 (76%), Positives = 706/822 (85%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC + +AP
Sbjct: 181 WEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAP 240
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
+FDQLPA+MMAVITMHKLM LLMTGG RV+QAA ++GEAIEHE RIH+FLE +K+
Sbjct: 241 FFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKS 300
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NAL+ +E KE+ERL VR+IV +QDD K WGQ+ +KVGC
Sbjct: 301 NALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGC 360
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
RLIQILM+TAYIQPP DQ++D PPDIRPAFVH LK+VET K S+RYGVI+CDP+VRKGL+
Sbjct: 361 RLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLD 420
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPP +W GY++G YLFLPSYIMRTHGA+QQREAVK+ P++QLEPVF
Sbjct: 421 KTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+AL+TLGNTKWRVN+++L ++DRIWA+GG+LADLVDR EI+KW+W
Sbjct: 481 QALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWK 540
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VK VKKEN ERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 541 VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEFAEGRPLG SGL W+KI LANVYGGGVDKLSYEGRV+F+EN+LEDIFDSA+RPL
Sbjct: 601 CRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPL 660
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EG+RWWLGAEDPFQCLATC+++AEALRSP+PET IS+MP+HQDGSCNGLQHYAALGRDKL
Sbjct: 661 EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKL 720
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DAA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 721 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIK+RLKER I+DD+E+FA ACYAAKTTLTALGEMFEAARSIM
Sbjct: 781 VMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIAMEN PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 841 WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 900
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA AC ++GL FAGVHDSYWTHACDVD MN+ILREKFVELY+
Sbjct: 901 TAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYD 960
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 961 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1303 bits (3372), Expect = 0.0
Identities = 630/822 (76%), Positives = 706/822 (85%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC + +AP
Sbjct: 181 WEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAP 240
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
+FDQLPA+MMAVITMHKLM LLMTGG RV+QAA ++GEAIEHE RIH+FLE +K+
Sbjct: 241 FFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKS 300
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NAL+ +E KE+ERL VR+IV +QDD K WGQ+ +KVGC
Sbjct: 301 NALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGC 360
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
RLIQILM+TAYIQPP DQ++D PPDIRPAFVH LK+VET K S+RYGVI+CDP+VRKGL+
Sbjct: 361 RLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLD 420
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPP +W GY++G YLFLPSYIMRTHGA+QQREAVK+ P++QLEPVF
Sbjct: 421 KTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+AL+TLGNTKWRVN+++L +++RIWA+GG+LADLVDR EI+KW+W
Sbjct: 481 QALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWK 540
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VK VKKEN ERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 541 VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEFAEGRPLG SGL W+KI LANVYGGGVDKLSYEGRV+F+EN+LEDIFDSA+RPL
Sbjct: 601 CRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPL 660
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EG+RWWLGAEDPFQCLATC+++AEALRSP+PET IS+MP+HQDGSCNGLQHYAALGRDKL
Sbjct: 661 EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKL 720
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DAA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 721 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIK+RLKER I+DD+E+FA ACYAAKTTLTALGEMFEAARSIM
Sbjct: 781 VMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIAMEN PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 841 WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 900
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA AC ++GL FAGVHDSYWTHACDVD MN+ILREKFVELY+
Sbjct: 901 TAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYD 960
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 961 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1303 bits (3371), Expect = 0.0
Identities = 629/822 (76%), Positives = 706/822 (85%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC + +AP
Sbjct: 181 WEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAP 240
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
+FDQLPA+MMAVITMHKLM LLMTGG RV+QAA H+GEAIEHE RIH+FLE +K+
Sbjct: 241 FFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKS 300
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NAL+ ++ KE+ERL VR+IV +QDD K WGQ+ +KVGC
Sbjct: 301 NALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGC 360
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
RLIQILM+TAYIQPP DQ++D PPDIRPAFVH LK+VET K S+RYGVI+CDP+VRKGL+
Sbjct: 361 RLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLD 420
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPP +W GY++GAYLFLPSYIMRTHGA+QQREAVK+ P++QLEPVF
Sbjct: 421 KTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+AL+TLGNTKWR+N+++L ++DRIWA+GG+LADLVDR +I+KW+W
Sbjct: 481 QALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWK 540
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VK VKKEN ERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 541 VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEFAEGRPLGKSGL W+KI LANVYGGGVDKLSYEGRV+F+EN++EDIFDSA+RPL
Sbjct: 601 CRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPL 660
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EG+RWWLGAEDPFQCLATC+++AEALRSP+PET IS+MP+HQDGSCNGLQHYAALGRD L
Sbjct: 661 EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTL 720
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DAA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 721 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIKRRLKER I+DD+E+FA ACYAAKTTLTALGEMFEAARSIM
Sbjct: 781 VMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIAMEN PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 841 WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 900
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA AC ++GL FAGVHDSYWTHA DVD MN+ILREKFVELY+
Sbjct: 901 TAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYD 960
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 961 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1301 bits (3368), Expect = 0.0
Identities = 628/822 (76%), Positives = 706/822 (85%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC + +AP
Sbjct: 181 WEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAP 240
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
+FDQLPA+MMAVITMHKLM LLMTGG RV+QAA H+GEAIEHE RIH+FLE +K+
Sbjct: 241 FFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKS 300
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NAL+ ++ KE+ER+ VR+IV +QDD K WGQ+ +KVGC
Sbjct: 301 NALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGC 360
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
RLIQILM+TAYIQPP DQ++D PPDIRPAFVH LK+VET K S+RYGVI+CDP+VRKGL+
Sbjct: 361 RLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLD 420
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPP +W GY++GAYLFLPSYIMRTHGA+QQREAVK+ P++QLEPVF
Sbjct: 421 KTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+AL+TLGNTKWR+N+++L ++DRIWA+GG+LADLVDR +I+KW+W
Sbjct: 481 QALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWK 540
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VK VKKEN ERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 541 VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEFAEGRPLGKSGL W+KI LANVYGGGVDKLSYEGRV+F+EN++EDIFDSA+RPL
Sbjct: 601 CRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPL 660
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EG+RWWLGAEDPFQCLATC+++AEALRSP+PET IS+MP+HQDGSCNGLQHYAALGRD L
Sbjct: 661 EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTL 720
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DAA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 721 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIKRRLKER I+DD+E+FA ACYAAKTTLTALGEMFEAARSIM
Sbjct: 781 VMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIAMEN PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 841 WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 900
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA AC ++GL FAGVHDSYWTHA DVD MN+ILREKFVELY+
Sbjct: 901 TAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYD 960
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 961 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 1297 bits (3357), Expect = 0.0
Identities = 627/822 (76%), Positives = 704/822 (85%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAAKEYQELL+DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ+LC + AP
Sbjct: 181 WEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGACAP 240
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
+FDQLPA+MMAVITMHKLM LMTGG RV+QAA H+GEAIEHE RIH+FLE +K+
Sbjct: 241 FFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKS 300
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
NAL+ ++ KE+ER+ VR+IV +QDD K WGQ+ +KVGC
Sbjct: 301 NALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGC 360
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSVETGKMSKRYGVIECDPIVRKGLE 2015
RLIQILM+TAYIQPP DQ++D PPDIRPAFVH LK+VET K S+RYGVI+CDP+VRKGL+
Sbjct: 361 RLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLD 420
Query: 2014 KTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVF 1835
KTA+HMVIPYMPMLVPP +W GY++GAYLFLPSYIMRTHGA+QQREAVK+ P++QLEPVF
Sbjct: 421 KTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480
Query: 1834 KALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWN 1655
+AL+TLGNTKWR+N+++L ++DRIWA+GG+LADLVDR +I+KW+W
Sbjct: 481 QALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWK 540
Query: 1654 VKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1475
VK VKKEN ERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 541 VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600
Query: 1474 CRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPL 1295
CRGILEFAEGRPLGKSGL W+KI LANVYGGGVDKLSYEGRV+F+EN++EDIFDSA+RPL
Sbjct: 601 CRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPL 660
Query: 1294 EGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKL 1115
EG+RWWLGAEDPFQCLATC+++AEALRSP+PET IS+MP+HQDGSCNGLQHYAALGRD L
Sbjct: 661 EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTL 720
Query: 1114 GAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQT 935
GAAAVNL AGDKPADVYSGIAARVL+IMK DAA DPA DPN ARLLI+QVDRKLVKQT
Sbjct: 721 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780
Query: 934 VMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMG 755
VMTSVYGVTYIGARDQIKRRLKER I+DD+E+FA ACYAAKTTLTALGEMFEAARSIM
Sbjct: 781 VMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840
Query: 754 WLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQR 575
WLGDCAKIIAMEN PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM KRQR
Sbjct: 841 WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 900
Query: 574 SAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYE 395
+AFPPNFVHSLD SHMMMTA AC ++GL FAGVHDSYWTHA DVD MN+ILREKFVELY+
Sbjct: 901 TAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYD 960
Query: 394 QPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
PI FP L+FP LPERGDFDL+EVL S YFFN
Sbjct: 961 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1293 bits (3347), Expect = 0.0
Identities = 631/824 (76%), Positives = 697/824 (84%), Gaps = 2/824 (0%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IAAEQ+LCK +AP
Sbjct: 155 WEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAP 214
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
YFD LPADMMAVITMHKLM LLMTG RV+QAA H+GEAIEHEVRI +F+E +K+K
Sbjct: 215 YFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKK 274
Query: 2374 NALNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGC 2195
+A + D +P KEQE+L VR+IV RQDD K WGQ+A +KVG
Sbjct: 275 SASSNNPDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGS 334
Query: 2194 RLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIECDPIVRKG 2021
RLI++L++TAYIQPP DQ+ D PPDIRPAFVH LK+V ET K ++RYGVIECDP+VRKG
Sbjct: 335 RLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKG 394
Query: 2020 LEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEP 1841
LEKTA+HMVIPYMPMLVPPLNWTGY++GAYLFLPSY+MR HGARQQREA+K+APR+ LEP
Sbjct: 395 LEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEP 454
Query: 1840 VFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWR 1661
F+ALNTLGNTKWR+NKR+L VIDRIWA+GG+LADLVDR EI+KW+
Sbjct: 455 AFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWK 514
Query: 1660 WNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 1481
W V++VKKENSERHSQRCD ELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGS
Sbjct: 515 WKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGS 574
Query: 1480 DLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADR 1301
DLCRGILEFAEGRPLGKSGL W+KI LANVY GGVDKLSYEGRV+FTEN+LEDIFDSADR
Sbjct: 575 DLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADR 634
Query: 1300 PLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRD 1121
PLEGRRWWL AEDPFQCLATC++L+EALRS +PET ISHMPVHQDGSCNGLQHYAALGRD
Sbjct: 635 PLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRD 694
Query: 1120 KLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVK 941
KLGAAAVNL AG+KPADVYSGIAARVL+IM+ DA DPA +PNA ARLLI QVDRKLVK
Sbjct: 695 KLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVK 754
Query: 940 QTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSI 761
QTVMTSVYGVTYIGARDQIKRRLKER AI D+ E+F+ +CYAAKTTLTALGEMFEAARSI
Sbjct: 755 QTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSI 814
Query: 760 MGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKR 581
M WLGDCAK+IA EN PVRW TPLGLPVVQPYRKLG+ +IKTSLQ L+LQRETDKVM KR
Sbjct: 815 MSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKR 874
Query: 580 QRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVEL 401
QR+AFPPNFVHSLD SHMMMTA AC KAGL FAGVHDSYWTHACDVD MN+ILREKFVEL
Sbjct: 875 QRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVEL 934
Query: 400 YEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
Y PI FP L FP LPERGDFDL+EVL S YFFN
Sbjct: 935 YGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 1273 bits (3293), Expect = 0.0
Identities = 622/840 (74%), Positives = 702/840 (83%), Gaps = 18/840 (2%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
W+EAAKEYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAA+Q+ CK + +HAP
Sbjct: 167 WQEAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAP 226
Query: 2554 YFDQLPADMMAVITMHKLMALLMTG-GCRNGVRVIQAAGHVGEAIEHEVRIHKFLE-TSK 2381
YFD LPAD MAVITMHKLM LLMT G VRV+QAA +GEAIEHEVRIH+FLE T K
Sbjct: 227 YFDHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKK 286
Query: 2380 RKNALNRTCD--------------EERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQ 2243
+KN +++ + +E++ KEQERL VR IV Q
Sbjct: 287 KKNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQ 346
Query: 2242 DDLKSWGQEAQLKVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKM 2069
+DLK WGQEA +KVGCRLIQ+LMDTAYIQPP+DQ+ D PPDIRPAFVH LK++ +T K
Sbjct: 347 EDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKT 406
Query: 2068 SKRYGVIECDPIVRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGAR 1889
S+RYGVIECDPIVRKG+EKTA+HMV+PYMPMLVPP+NWTGY+RGAYLFLPSY+MRTHGA+
Sbjct: 407 SRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAK 466
Query: 1888 QQREAVKKAPREQLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXX 1709
QQRE VK+ PR+QLEPVF+AL+TLG+TKWRVNKR+L VIDRIWA+GG+LADLVDR
Sbjct: 467 QQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPL 526
Query: 1708 XXXXXXXXXXEIKKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDF 1529
EI+KW+W +KA KKENSERHSQRCD ELKL +RKMKDEEGFYYPHNLDF
Sbjct: 527 PEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDF 586
Query: 1528 RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRV 1349
RGRAYPMHPYLNHLGSD+CRGILEF+EGR LGKSGL W+KI LAN+Y GGVDKLS++ R
Sbjct: 587 RGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRA 646
Query: 1348 SFTENNLEDIFDSADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQ 1169
+FTEN++++IFDSADRPLEGRRWWLGAEDPFQCLA C++L EALRSP+PET IS+MPVHQ
Sbjct: 647 AFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQ 706
Query: 1168 DGSCNGLQHYAALGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNA 989
DGSCNGLQHYAALGRDKLGAAAVNL GDKPADVYSGIAARVL+IM+ DA DPA +PNA
Sbjct: 707 DGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNA 766
Query: 988 KHARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAK 809
HARLLI+QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER +I DD+ +FA ACYAA+
Sbjct: 767 LHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAAR 826
Query: 808 TTLTALGEMFEAARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSL 629
TTLTALGEMFEAARSIM WLG+CAK+IA ENQPVRW TPLGLPVVQPYR+LG+ +IKTSL
Sbjct: 827 TTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSL 886
Query: 628 QNLTLQRETDKVMTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHAC 449
Q LTLQRETDKVM KRQR+AFPPNFVHSLD SHMMMTA AC KAGL FAGVHDSYWTHAC
Sbjct: 887 QVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHAC 946
Query: 448 DVDTMNQILREKFVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
D+D MN+ILREKFVELYE PI FP L FP LP+RGDFDL++VL S YFFN
Sbjct: 947 DIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 1269 bits (3283), Expect = 0.0
Identities = 619/810 (76%), Positives = 684/810 (84%), Gaps = 2/810 (0%)
Frame = -1
Query: 2692 MCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAPYFDQLPADMMAVIT 2513
MCEQKLAPNLPY+KSLFLGWFEPLRD IAAEQ+LCK +APYFD LPADMMAVIT
Sbjct: 1 MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60
Query: 2512 MHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRKNALNRTCDEERDPA 2333
MHKLM LLMTG RV+QAA H+GEAIEHEVRI +F+E +K+K+A + D +P
Sbjct: 61 MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPV 120
Query: 2332 AKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKVGCRLIQILMDTAYIQP 2153
KEQE+L VR+IV RQDD K WGQ+A +KVG RLI++L++TAYIQP
Sbjct: 121 TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQP 180
Query: 2152 PLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIECDPIVRKGLEKTAKHMVIPYMP 1979
P DQ+ D PPDIRPAFVH LK+V ET K ++RYGVIECDP+VRKGLEKTA+HMVIPYMP
Sbjct: 181 PADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMP 240
Query: 1978 MLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQLEPVFKALNTLGNTKWR 1799
MLVPPLNWTGY++GAYLFLPSY+MR HGARQQREA+K+APR+ LEP F+ALNTLGNTKWR
Sbjct: 241 MLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWR 300
Query: 1798 VNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKKWRWNVKAVKKENSERH 1619
+NKR+L VIDRIWA+GG+LADLVDR EI+KW+W V++VKKENSERH
Sbjct: 301 INKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERH 360
Query: 1618 SQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 1439
SQRCD ELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP
Sbjct: 361 SQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 420
Query: 1438 LGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSADRPLEGRRWWLGAEDP 1259
LGKSGL W+KI LANVY GGVDKLSYEGRV+FTEN+LEDIFDSADRPLEGRRWWL AEDP
Sbjct: 421 LGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDP 480
Query: 1258 FQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLTAGDK 1079
FQCLATC++L+EALRS +PET ISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNL AG+K
Sbjct: 481 FQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK 540
Query: 1078 PADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKLVKQTVMTSVYGVTYIG 899
PADVYSGIAARVL+IM+ DA DPA +PNA ARLLI QVDRKLVKQTVMTSVYGVTYIG
Sbjct: 541 PADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIG 600
Query: 898 ARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAARSIMGWLGDCAKIIAME 719
ARDQIKRRLKER AI D+ E+F+ +CYAAKTTLTALGEMFEAARSIM WLGDCAK+IA E
Sbjct: 601 ARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASE 660
Query: 718 NQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMTKRQRSAFPPNFVHSLD 539
N PVRW TPLGLPVVQPYRKLG+ +IKTSLQ L+LQRETDKVM KRQR+AFPPNFVHSLD
Sbjct: 661 NHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLD 720
Query: 538 SSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFVELYEQPIXXXXXXXXX 359
SHMMMTA AC KAGL FAGVHDSYWTHACDVD MN+ILREKFVELY PI
Sbjct: 721 GSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQ 780
Query: 358 XXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
FP L FP LPERGDFDL+EVL S YFFN
Sbjct: 781 KSFPTLNFPPLPERGDFDLREVLESPYFFN 810
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
X2 [Oryza brachyantha]
Length = 839
Score = 1261 bits (3263), Expect = 0.0
Identities = 609/826 (73%), Positives = 694/826 (84%), Gaps = 4/826 (0%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AAKEY+ELL DMCE KLAPNLPYVKSLFLGWFEPLRD I AEQ+L + +HA
Sbjct: 14 WEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQDLVCERRARASHAR 73
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
YF+ LPADMMAVITMHKLM LLMTG VRVIQAA +GEAIEHEVR+HKFLE K+K
Sbjct: 74 YFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRLHKFLEKPKKK 133
Query: 2374 NALNRTCDEER--DPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKV 2201
+ +EE AKEQERL VR IV +QD+ K WGQ+ KV
Sbjct: 134 RSKEMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKV 193
Query: 2200 GCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIECDPIVR 2027
G RLI+++++TAYIQPP Q D PPDIRPAF H +++V E K S+RYGVI+CDP+VR
Sbjct: 194 GSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLVR 253
Query: 2026 KGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQL 1847
+GL++TAKHMVIPYMPML+PP++WTGY++GA+LFLPSY+MRTHGARQQREAVK+APREQ+
Sbjct: 254 QGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQM 313
Query: 1846 EPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKK 1667
+ VF+AL+TLG+TKWRVNKR+LS++DRIW++GG+LADLVDR ++KK
Sbjct: 314 QSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAKLKK 373
Query: 1666 WRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 1487
WRWN+KA KKENSERHSQRCD ELKL VARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL
Sbjct: 374 WRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 433
Query: 1486 GSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSA 1307
GSDLCRG+LEFAEGRPLGKSGL W+KI LAN+Y GGVDKLSY+GR++FTEN+LEDIFDSA
Sbjct: 434 GSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSA 493
Query: 1306 DRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALG 1127
DRPLEG+RWWLGAEDPFQCLA C++L EALRSP+PET+ISH+PVHQDGSCNGLQHYAALG
Sbjct: 494 DRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALG 553
Query: 1126 RDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKL 947
RDKLGA AVNL AG+KPADVY+GIA RVLEIM+ DA DPA DP+A AR+L+DQVDRKL
Sbjct: 554 RDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKL 613
Query: 946 VKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAAR 767
VKQTVMTSVYGVTY+GAR+QIKRRLKER I DDSE+F+ +CYAAK TLTALGEMF+AAR
Sbjct: 614 VKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAAR 673
Query: 766 SIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMT 587
SIM WLGDCAKIIA EN+PV+WTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM
Sbjct: 674 SIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 733
Query: 586 KRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFV 407
KRQR+AFPPNFVHSLD SHMMMTA AC + GL FAGVHDSYWTHACDVDTMN+ILREKFV
Sbjct: 734 KRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFV 793
Query: 406 ELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
ELY+ PI FP+LKFP LPERGDFDLK+VLGS YFFN
Sbjct: 794 ELYDTPILENLLGSFEKSFPELKFPPLPERGDFDLKDVLGSPYFFN 839
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 1260 bits (3260), Expect = 0.0
Identities = 608/828 (73%), Positives = 697/828 (84%), Gaps = 6/828 (0%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AA+EY+ELL DMC+QKLAPNLPYVKSLFLGWFEPLRD I AEQEL + +HA
Sbjct: 192 WEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHAR 251
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
YF+ LPADMMAVITMHKLM LLMTG VRVIQAA +GEAIEHEVRIHKFLE +K+K
Sbjct: 252 YFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKK 311
Query: 2374 NALNRTCDEERDPA----AKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQL 2207
+ N+ D E + AKEQERL VR IV +QD+ K WGQ+A
Sbjct: 312 S--NKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHA 369
Query: 2206 KVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIECDPI 2033
KVG RLI+++++TAYIQPP Q D PPDIRPAF H +++V E K S+RYGVI+CDP+
Sbjct: 370 KVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPL 429
Query: 2032 VRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPRE 1853
VR+GL++TAKHMVIPYMPML+PP++WTGY++GA+LFLPSY+MRTHGARQQR+AV++APRE
Sbjct: 430 VRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPRE 489
Query: 1852 QLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEI 1673
Q++ VF+ALNTLG+TKWRVNKR+LS++DRIW++GG+LADLVDR ++
Sbjct: 490 QMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKL 549
Query: 1672 KKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 1493
KKWRW ++A KKENSERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPYLN
Sbjct: 550 KKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLN 609
Query: 1492 HLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFD 1313
HLGSDLCRG+LEFAEGRPLGKSGL W+KI LAN+Y GGVDKLSY+GR++FTEN+LEDIFD
Sbjct: 610 HLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFD 669
Query: 1312 SADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAA 1133
SADRPLEG+RWWLGAEDPFQCLA C++L EALRSP+PET+ISH+PVHQDGSCNGLQHYAA
Sbjct: 670 SADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAA 729
Query: 1132 LGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDR 953
LGRDKLGA AVNL AG+KPADVY+GIA RV+EIMK DA DPA DP+A ARLL+DQVDR
Sbjct: 730 LGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDR 789
Query: 952 KLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEA 773
KLVKQTVMTSVYGVTY+GAR+QIKRRLKER I DDSE+F+ +CYAAK TLTALGEMF+A
Sbjct: 790 KLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQA 849
Query: 772 ARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKV 593
ARSIM WLGDCAK+IA EN+PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKV
Sbjct: 850 ARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV 909
Query: 592 MTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREK 413
M KRQR+AFPPNFVHSLD SHMMMTA AC + GL FAGVHDSYWTHACDVDTMN+ILREK
Sbjct: 910 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREK 969
Query: 412 FVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
FVELY+ PI FP+LKFP LPERGDFDL +VLGS YFFN
Sbjct: 970 FVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 1017
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 1260 bits (3260), Expect = 0.0
Identities = 608/828 (73%), Positives = 697/828 (84%), Gaps = 6/828 (0%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AA+EY+ELL DMC+QKLAPNLPYVKSLFLGWFEPLRD I AEQEL + +HA
Sbjct: 158 WEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHAR 217
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
YF+ LPADMMAVITMHKLM LLMTG VRVIQAA +GEAIEHEVRIHKFLE +K+K
Sbjct: 218 YFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKK 277
Query: 2374 NALNRTCDEERDPA----AKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQL 2207
+ N+ D E + AKEQERL VR IV +QD+ K WGQ+A
Sbjct: 278 S--NKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHA 335
Query: 2206 KVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIECDPI 2033
KVG RLI+++++TAYIQPP Q D PPDIRPAF H +++V E K S+RYGVI+CDP+
Sbjct: 336 KVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPL 395
Query: 2032 VRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPRE 1853
VR+GL++TAKHMVIPYMPML+PP++WTGY++GA+LFLPSY+MRTHGARQQR+AV++APRE
Sbjct: 396 VRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPRE 455
Query: 1852 QLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEI 1673
Q++ VF+ALNTLG+TKWRVNKR+LS++DRIW++GG+LADLVDR ++
Sbjct: 456 QMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKL 515
Query: 1672 KKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 1493
KKWRW ++A KKENSERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYPMHPYLN
Sbjct: 516 KKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLN 575
Query: 1492 HLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFD 1313
HLGSDLCRG+LEFAEGRPLGKSGL W+KI LAN+Y GGVDKLSY+GR++FTEN+LEDIFD
Sbjct: 576 HLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFD 635
Query: 1312 SADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAA 1133
SADRPLEG+RWWLGAEDPFQCLA C++L EALRSP+PET+ISH+PVHQDGSCNGLQHYAA
Sbjct: 636 SADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAA 695
Query: 1132 LGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDR 953
LGRDKLGA AVNL AG+KPADVY+GIA RV+EIMK DA DPA DP+A ARLL+DQVDR
Sbjct: 696 LGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDR 755
Query: 952 KLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEA 773
KLVKQTVMTSVYGVTY+GAR+QIKRRLKER I DDSE+F+ +CYAAK TLTALGEMF+A
Sbjct: 756 KLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQA 815
Query: 772 ARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKV 593
ARSIM WLGDCAK+IA EN+PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKV
Sbjct: 816 ARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV 875
Query: 592 MTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREK 413
M KRQR+AFPPNFVHSLD SHMMMTA AC + GL FAGVHDSYWTHACDVDTMN+ILREK
Sbjct: 876 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREK 935
Query: 412 FVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
FVELY+ PI FP+LKFP LPERGDFDL +VLGS YFFN
Sbjct: 936 FVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 983
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 1259 bits (3257), Expect = 0.0
Identities = 622/833 (74%), Positives = 692/833 (83%), Gaps = 11/833 (1%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+ A+EYQE+L DMCEQKLAPNLPYVKSLFLGWFEPLRDAI AEQELCK +SR H
Sbjct: 31 WEQTAREYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAILAEQELCKVNSR-VPHRA 89
Query: 2554 YFDQLPADMMAVITMHKLMALLMTG-GCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKR 2378
YF+ LPADMMAVITMHKLM LLMTG G +RV+QAA VGEAIE+E +IHKFLE +K+
Sbjct: 90 YFNDLPADMMAVITMHKLMGLLMTGNGGTASIRVVQAASVVGEAIENEAKIHKFLEKTKK 149
Query: 2377 KNALNRTCDEERDPAA--------KEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWG 2222
+ L E AA KEQE+L VRRIV DD WG
Sbjct: 150 RKNLKEKISEGESVAAIYEGEKLTKEQEKLRKKVTTLMKKQKVHQVRRIVKGHDDSMPWG 209
Query: 2221 QEAQLKVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVI 2048
QEA LKVG RLIQ++++TAYIQPP+DQ+ D PPDIRPAFVH LK++ +T K S+RYGVI
Sbjct: 210 QEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVHTLKTITKDTQKSSRRYGVI 269
Query: 2047 ECDPIVRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVK 1868
ECDP+VRKGLEK+A+HMVIPYMPMLVPPLNWTGY++GAY FLPSY+MR HGA+QQR A+K
Sbjct: 270 ECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAYFFLPSYVMRIHGAKQQRVAIK 329
Query: 1867 KAPREQLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXX 1688
+A R QLEPVFKAL+TLGNTKWRVNKRIL VIDRIWA+GG LA LVDR
Sbjct: 330 RASRNQLEPVFKALDTLGNTKWRVNKRILGVIDRIWASGGHLAGLVDREDVPLPEEPQTE 389
Query: 1687 XXXEIKKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPM 1508
EI+KWRW VK+VKKENSERHSQRCD ELKL VARKMKDEEGFYYPHN+DFRGRAYPM
Sbjct: 390 DEAEIRKWRWKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNVDFRGRAYPM 449
Query: 1507 HPYLNHLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNL 1328
HPYLNHLGSD+CRGILEFAEGRPLGKSGL W+KI LAN+Y GGVDKLSY+GR+SFTEN+L
Sbjct: 450 HPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRISFTENHL 509
Query: 1327 EDIFDSADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGL 1148
+DIFDSADRPLEG+RWWLGAEDPFQCLA C++L+EALRSP+PET ISH PVHQDGSCNGL
Sbjct: 510 DDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEALRSPSPETAISHTPVHQDGSCNGL 569
Query: 1147 QHYAALGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLI 968
QHYAALGRDKLGAAAVNL G KPADVYSGIAARVL+IM+ DA DPAI+PN+ HA+LLI
Sbjct: 570 QHYAALGRDKLGAAAVNLVGGGKPADVYSGIAARVLDIMRRDAENDPAINPNSVHAKLLI 629
Query: 967 DQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALG 788
+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER I DD ++++ ACYAAKTTLTAL
Sbjct: 630 NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCNIADDPQLYSAACYAAKTTLTALE 689
Query: 787 EMFEAARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQR 608
EMFE AR IM WLG+CAK+IA ENQPV+WTTP GLPVVQPYR+LG+Q+IKTSLQ LTLQR
Sbjct: 690 EMFEGARGIMAWLGECAKVIASENQPVQWTTPFGLPVVQPYRQLGRQLIKTSLQVLTLQR 749
Query: 607 ETDKVMTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQ 428
ETDKVM KRQR+AFPPNFVHSLD SHMMMTA AC +AGL FAGVHDSYWTHACDVD MN+
Sbjct: 750 ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHDSYWTHACDVDEMNR 809
Query: 427 ILREKFVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
ILREKFVELYE PI FP LKFP LPERGDFDL++VL STYFFN
Sbjct: 810 ILREKFVELYETPILENLLESFQSSFPNLKFPPLPERGDFDLRDVLQSTYFFN 862
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 1252 bits (3239), Expect = 0.0
Identities = 608/832 (73%), Positives = 694/832 (83%), Gaps = 10/832 (1%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAAKEYQELL+DMCE KLAPNLPY+KSLFLGWFEPLRD+I EQELCK++ R +HA
Sbjct: 166 WEEAAKEYQELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGEQELCKENCR-ISHAA 224
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGC-RNGVRVIQAAGHVGEAIEHEVRIHKFLETSKR 2378
YF++L ADMMAV+TMHKLM LLMT G+RV+QAA +GEAIEHE +I FL +K+
Sbjct: 225 YFNELSADMMAVVTMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIEHEAKIQSFLGKTKK 284
Query: 2377 KNALNRTCDEERDPAA-------KEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQ 2219
K ++ D E +P K+QE+L VR+IV D KSWGQ
Sbjct: 285 KKTTDKKPDGESEPVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRKIVKGHDTSKSWGQ 344
Query: 2218 EAQLKVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIE 2045
EA +KVGCRLIQ+L++ AYIQPP+DQ+ D PPDIRPAFVH+LK++ + K S+RYGVIE
Sbjct: 345 EAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKGSRRYGVIE 404
Query: 2044 CDPIVRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKK 1865
CD +VRKGLEKTA+HMVIPYMPMLVPP NWTGY+RGAYLFLPSY+MRTHGA+QQRE VK+
Sbjct: 405 CDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAKQQRETVKR 464
Query: 1864 APREQLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXX 1685
PR+QLEP+F+AL+TLGNTKWR+NKR+L V+DR+WANGG++A LVDR
Sbjct: 465 TPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPLPEKPDTED 524
Query: 1684 XXEIKKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMH 1505
EI+KW+W VKA K+N+ERHS RCD ELKL VARKM+DE+GFYYPHNLDFRGRAYPMH
Sbjct: 525 EAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMH 584
Query: 1504 PYLNHLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLE 1325
PYLNHLGSDLCRG+LEFAEGRPLGKSGL W+KI LAN+Y GGVDKLSYEGR++FTEN+L+
Sbjct: 585 PYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLD 644
Query: 1324 DIFDSADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQ 1145
DIFDSADRPLEGRRWWL AEDPFQCLA C++L+EALRS +PET ISHMPVHQDGSCNGLQ
Sbjct: 645 DIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQ 704
Query: 1144 HYAALGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLID 965
HYAALGRDKLGAA+VNL AG+KPADVYSGIAARV++IM+ DA DPAI+P+A HARLLI+
Sbjct: 705 HYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLIN 764
Query: 964 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGE 785
QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI DD+EMF +CYAA+TTLTALGE
Sbjct: 765 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGE 824
Query: 784 MFEAARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRE 605
MF+AARSIM WLG+CAK+I+ ENQPVRW TPLGLPVVQPYR+LG+ +IKTSLQ LTLQRE
Sbjct: 825 MFQAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRE 884
Query: 604 TDKVMTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQI 425
TDKVM KRQR+AFPPNFVHSLD SHMMMTA AC KAGL FAGVHDSYWTHACDVD MN+I
Sbjct: 885 TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRI 944
Query: 424 LREKFVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
LREKFVELYE PI FP L FP LPERGDFDL+EVL S YFFN
Sbjct: 945 LREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 1249 bits (3232), Expect = 0.0
Identities = 604/829 (72%), Positives = 691/829 (83%), Gaps = 7/829 (0%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD I EQEL D +H P
Sbjct: 150 WEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIVTEQELVADPGSRASHGP 209
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
YF+ LPADMMAVITMHKLM LLMTG VRVIQAA +GEAIEHEVRI++FLE +++K
Sbjct: 210 YFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLEKTRKK 269
Query: 2374 NALNRTCDEERDPA-----AKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQ 2210
+ N+ ++E + A AKEQ+RL VR IV QD+ + WGQ+ Q
Sbjct: 270 S--NKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQVRNIVKNQDNSRPWGQDVQ 327
Query: 2209 LKVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIECDP 2036
KVG RLI++ MDTA+IQPP Q D PDIRPAF H +++V E K S+RYGVI+CDP
Sbjct: 328 AKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDP 387
Query: 2035 IVRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPR 1856
+VR+GL++TAKHMVIPYMPML+PP+ WTGY++GA+LFLPSY+MRTHGARQQREAVK+APR
Sbjct: 388 LVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPR 447
Query: 1855 EQLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXE 1676
EQ++ VF+ALNTLG+TKWRVNKR+LS++DRIW++GG+LADLVDR
Sbjct: 448 EQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVPLPEKPDTEDETL 507
Query: 1675 IKKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 1496
IK W+W++++VKKENSERHSQRCD ELKL VARKMKDEEGFYYPHNLDFRGRAYPMHPYL
Sbjct: 508 IKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 567
Query: 1495 NHLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIF 1316
NHLGSDLCRGILEFAEGRPLGKSGLHW+KI LAN+Y GGVDKLSY+GRV+FTEN+LE+IF
Sbjct: 568 NHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIF 627
Query: 1315 DSADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYA 1136
DSADRPLEG+RWWLGAEDPFQCLA C++L EALRS +PET ISH+PVHQDGSCNGLQHYA
Sbjct: 628 DSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYA 687
Query: 1135 ALGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVD 956
ALGRDKLGA AVNL AG+KPADVY+GIA RVLEIM+ DA DP+IDP+ ARL++DQVD
Sbjct: 688 ALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQVD 747
Query: 955 RKLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFE 776
RKLVKQTVMTSVYGVTY+GARDQIKRRLKER I D++E+F +CYAAK TLTALGEMF+
Sbjct: 748 RKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYAAKVTLTALGEMFQ 807
Query: 775 AARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDK 596
AAR IM WLGDCAK+IA EN+PVRWTTPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDK
Sbjct: 808 AARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDK 867
Query: 595 VMTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILRE 416
VM KRQR+AFPPNFVHSLD SHMMMTA AC + GL FAGVHDSYWTHACDVDTMN+ILRE
Sbjct: 868 VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILRE 927
Query: 415 KFVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
KFVELY+ PI FPKLKFP LPERGDFD+KEVL S YFFN
Sbjct: 928 KFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESPYFFN 976
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 1248 bits (3228), Expect = 0.0
Identities = 611/834 (73%), Positives = 689/834 (82%), Gaps = 12/834 (1%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WEEAA+EYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAIA EQEL ++ + +H P
Sbjct: 164 WEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKNNKLSHGP 223
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNG-VRVIQAAGHVGEAIEHEVRIHKFLETSKR 2378
YFD LPADMMAVITMHKLM LLMT NG VRV+QAA VGEAIEHE RIH+FLE +K+
Sbjct: 224 YFDALPADMMAVITMHKLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARIHRFLEKTKK 283
Query: 2377 KNALNRTCDEE---------RDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSW 2225
K + + E + AKEQE+L VR + DD W
Sbjct: 284 KKKSTKNEEPEGKLEPVTSDAEKLAKEQEKLRKKVTELMKKQKVQQVRGLTKGHDDSMPW 343
Query: 2224 GQEAQLKVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGV 2051
GQEAQ+KVGCRLIQ+L++TAYIQPP++Q+ D PDIRPAF+H LK+V +T K S+RYGV
Sbjct: 344 GQEAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLKNVMKDTQKTSRRYGV 403
Query: 2050 IECDPIVRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAV 1871
IECDPIVR GLEK+A+HMVIPYMPMLVPPLNW GY++GAYLFLPSY+MRTHGA+QQR AV
Sbjct: 404 IECDPIVRNGLEKSARHMVIPYMPMLVPPLNWEGYDQGAYLFLPSYVMRTHGAKQQRNAV 463
Query: 1870 KKAPREQLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXX 1691
K+ P +QLEPV++ALNTLGNTKWR+NK+IL+V+DRIWANGG+LA L+DR
Sbjct: 464 KRTPWKQLEPVYEALNTLGNTKWRINKKILTVVDRIWANGGRLAGLIDREDEPLPEELET 523
Query: 1690 XXXXEIKKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYP 1511
EIKKW+W VK VKKENSERHSQRCD ELKL VARKMKDE+GFYYPHNLDFRGRAYP
Sbjct: 524 EDENEIKKWKWKVKNVKKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYP 583
Query: 1510 MHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENN 1331
MHP+LNHLGSD+CRGILEFAEGRPLGKSG W+KI LANVY GGVDKLSYEGRV+FTEN+
Sbjct: 584 MHPHLNHLGSDMCRGILEFAEGRPLGKSGFRWLKIHLANVYAGGVDKLSYEGRVAFTENH 643
Query: 1330 LEDIFDSADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNG 1151
L+ IFDSADRPLEGRRWWLGAEDPFQCLATC +LAEA RS +PET ISHMP+HQDGSCNG
Sbjct: 644 LDYIFDSADRPLEGRRWWLGAEDPFQCLATCFNLAEAFRSSSPETTISHMPIHQDGSCNG 703
Query: 1150 LQHYAALGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLL 971
LQHYAALGRDKLGAAAVNL +G+KPADVYSGIAARVL+IM+TDA DP +PNA HA+LL
Sbjct: 704 LQHYAALGRDKLGAAAVNLVSGEKPADVYSGIAARVLDIMRTDAEKDPGTNPNALHAKLL 763
Query: 970 IDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTAL 791
I++VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A+ DD ++A +CYAAKTTL AL
Sbjct: 764 INEVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVADDPSLYAASCYAAKTTLMAL 823
Query: 790 GEMFEAARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQ 611
EMFE ARSIM WLG+CAK+IA ENQPV+WTTPLGLPVVQPYR+LG+ +IKTSLQ L LQ
Sbjct: 824 EEMFEGARSIMAWLGECAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQ 883
Query: 610 RETDKVMTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMN 431
+ETDK+M KRQR+AFPPNFVHSLD SHMMMTA AC AGL FAGVHDSYWTHACDVD MN
Sbjct: 884 KETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMN 943
Query: 430 QILREKFVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
+ILRE FVELYE PI FPKLKFP LP+RGDFDL++VL S YFFN
Sbjct: 944 RILRENFVELYEAPILENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 1247 bits (3227), Expect = 0.0
Identities = 616/833 (73%), Positives = 693/833 (83%), Gaps = 11/833 (1%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AA+EYQE+L DMCEQKLAPNLPYVKSLFLGWFEPLRDAI AEQELCK + R +H
Sbjct: 157 WEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAIVAEQELCKRNLR-VSHRA 215
Query: 2554 YFDQLPADMMAVITMHKLMALLMTG-GCRNGVRVIQAAGHVGEAIEHEVRIHKFLE-TSK 2381
+F LPADMMAVITMHKLM LLMTG G +RV+QAA VGEAIEHE RIHKFLE T K
Sbjct: 216 HFSDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQAASVVGEAIEHEGRIHKFLEKTKK 275
Query: 2380 RKNALNRTCDEERDPA-------AKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWG 2222
RKN + + E D A +KEQE+L VRRIV DD + WG
Sbjct: 276 RKNVEAKISEGESDAAIEEGEKLSKEQEKLRKKVTTLIKKQKVQQVRRIVKGHDDSRPWG 335
Query: 2221 QEAQLKVGCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVI 2048
QE +KVG RLIQ++++TAYIQPP+DQ+ D PPDIRPAFVH LK++ +T K S+RYGVI
Sbjct: 336 QEEHVKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVHTLKTITKDTQKSSRRYGVI 395
Query: 2047 ECDPIVRKGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVK 1868
ECDP+VRKGLEK+A+HMVIPYMPMLVPPLNWTGY++GA+LFLPSY+MR HG++QQR+AVK
Sbjct: 396 ECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAHLFLPSYVMRIHGSKQQRDAVK 455
Query: 1867 KAPREQLEPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXX 1688
+A R QLEPVFKAL+TLGNTKWR+NKR+L V+DRIWA+GG LA LVDR
Sbjct: 456 RASRNQLEPVFKALDTLGNTKWRINKRVLVVVDRIWASGGHLAGLVDREDAPLPEEPQTE 515
Query: 1687 XXXEIKKWRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPM 1508
EI+KW W V++VKKENSERHSQRCD ELKL VARKMKDEEGFYYPHNLDFRGRAYPM
Sbjct: 516 DEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPM 575
Query: 1507 HPYLNHLGSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNL 1328
HPYLNHLGSD+CRGILEFAEGRPLGKSGL W+KI LAN+Y GGVDKLSY+GR+SFTEN+L
Sbjct: 576 HPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRISFTENHL 635
Query: 1327 EDIFDSADRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGL 1148
+DIFDSAD+PLEGRRWWLGAEDPFQCLA C++L+EALRSP+PET SH PVHQDGSCNGL
Sbjct: 636 DDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRSPSPETATSHTPVHQDGSCNGL 695
Query: 1147 QHYAALGRDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLI 968
QHYAALGRDKLGAAAVNL G+KPADVYSGIA RVL+IM+ DA DPAI+PN+ HA+LL+
Sbjct: 696 QHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLDIMQRDAEKDPAINPNSVHAKLLV 755
Query: 967 DQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALG 788
+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER I DD ++++ ACYAAKTTL AL
Sbjct: 756 NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCIIADDPQLYSAACYAAKTTLMALE 815
Query: 787 EMFEAARSIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQR 608
EMFE AR IM WLG+CAK+IA ENQPVRWTTPLGLPVVQPYR+LG+ +IKTSLQ LTL+R
Sbjct: 816 EMFEGARGIMAWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLKR 875
Query: 607 ETDKVMTKRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQ 428
ETDKVM KRQR+AFPPNFVHSLD SHMMMTA AC +AGL FAGVHDSYWTHACDVD MN+
Sbjct: 876 ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHDSYWTHACDVDEMNR 935
Query: 427 ILREKFVELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
ILREKFVELYE PI FP LKFP LPERG FDLK+VL STYFFN
Sbjct: 936 ILREKFVELYEAPILENLLESFQSSFPNLKFPPLPERGVFDLKDVLRSTYFFN 988
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 1245 bits (3222), Expect = 0.0
Identities = 599/826 (72%), Positives = 692/826 (83%), Gaps = 4/826 (0%)
Frame = -1
Query: 2734 WEEAAKEYQELLVDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAAEQELCKDSSRSTTHAP 2555
WE+AAKEY+ELL DMCE KLAPNLPYVKSLFLGWFEPLRD I AEQEL + +HAP
Sbjct: 167 WEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHAP 226
Query: 2554 YFDQLPADMMAVITMHKLMALLMTGGCRNGVRVIQAAGHVGEAIEHEVRIHKFLETSKRK 2375
YF+ LPADMMAVITMHKLM LLMTG VRVIQAA +GEAIEHEVRIHKFLE +K+K
Sbjct: 227 YFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKK 286
Query: 2374 NA--LNRTCDEERDPAAKEQERLTXXXXXXXXXXXXXXVRRIVSRQDDLKSWGQEAQLKV 2201
N ++ + AKEQ+RL VR IV +QD + WGQ+A KV
Sbjct: 287 NTKEVDNVVEAGDSDIAKEQQRLRKKVTDLMKKQKIRQVRNIVKKQDSTRPWGQDAHAKV 346
Query: 2200 GCRLIQILMDTAYIQPPLDQMEDAPPDIRPAFVHALKSV--ETGKMSKRYGVIECDPIVR 2027
G RLI++L++TA+IQPP+ Q D+ PDIRPAF H +++V E K S+RYGVI+CDP++R
Sbjct: 347 GSRLIELLIETAHIQPPVSQSADSTPDIRPAFTHEMRTVTREQQKSSRRYGVIKCDPLIR 406
Query: 2026 KGLEKTAKHMVIPYMPMLVPPLNWTGYERGAYLFLPSYIMRTHGARQQREAVKKAPREQL 1847
+GL++TAKHMVIPYMPML+PP++WTGY++GA+LFLPSY+MRTHGARQQREAVKKAP+EQ+
Sbjct: 407 QGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQM 466
Query: 1846 EPVFKALNTLGNTKWRVNKRILSVIDRIWANGGQLADLVDRXXXXXXXXXXXXXXXEIKK 1667
+ +F+AL+TLG+TKWR+NK++LS++DRIW++GG+LADLVDR E+KK
Sbjct: 467 QLIFEALDTLGSTKWRINKKVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDETELKK 526
Query: 1666 WRWNVKAVKKENSERHSQRCDTELKLVVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 1487
WRWN+++VKKENSERHSQRCD ELKL VARKMKDE GFYYPHNLDFRGRAYPMHPYLNHL
Sbjct: 527 WRWNLRSVKKENSERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHL 586
Query: 1486 GSDLCRGILEFAEGRPLGKSGLHWMKIQLANVYGGGVDKLSYEGRVSFTENNLEDIFDSA 1307
GSDLCRG+LEF+EGRPLG SGL W+KI LAN+Y GGVDKLSY+GR++FTEN+LEDIFDSA
Sbjct: 587 GSDLCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSA 646
Query: 1306 DRPLEGRRWWLGAEDPFQCLATCVSLAEALRSPNPETVISHMPVHQDGSCNGLQHYAALG 1127
+RPLEG+RWWLGAEDPFQCLA C+ L EALRS +PE +ISH+PVHQDGSCNGLQHYAALG
Sbjct: 647 NRPLEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMISHIPVHQDGSCNGLQHYAALG 706
Query: 1126 RDKLGAAAVNLTAGDKPADVYSGIAARVLEIMKTDAAGDPAIDPNAKHARLLIDQVDRKL 947
RDKLGA AVNL +G+KPADVYSGIA RV+EIM+ DA DPA+DP+A ARLL+DQVDRKL
Sbjct: 707 RDKLGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKDPALDPDAARARLLVDQVDRKL 766
Query: 946 VKQTVMTSVYGVTYIGARDQIKRRLKERHAIDDDSEMFACACYAAKTTLTALGEMFEAAR 767
VKQTVMTSVYGVTY+GAR+QIKRRLKER I DDSE+FA +CYAAK TLTALGEMFEAAR
Sbjct: 767 VKQTVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFAASCYAAKVTLTALGEMFEAAR 826
Query: 766 SIMGWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGKQVIKTSLQNLTLQRETDKVMT 587
SIM WLGDCAK+IA EN+PVRW TPLGLPVVQPYRKLG+ +IKTSLQ LTLQRETDKVM
Sbjct: 827 SIMNWLGDCAKVIACENEPVRWMTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 886
Query: 586 KRQRSAFPPNFVHSLDSSHMMMTATACSKAGLYFAGVHDSYWTHACDVDTMNQILREKFV 407
KRQR+AFPPNFVHSLD SHMMMTA AC+K GLYFAGVHDSYWTHACDVDTMN+ILREKFV
Sbjct: 887 KRQRTAFPPNFVHSLDGSHMMMTAVACNKQGLYFAGVHDSYWTHACDVDTMNKILREKFV 946
Query: 406 ELYEQPIXXXXXXXXXXXFPKLKFPSLPERGDFDLKEVLGSTYFFN 269
ELY+ PI FP L+FP LPERGDFDL +VL S YFFN
Sbjct: 947 ELYDAPILENLLDSFETSFPTLRFPPLPERGDFDLNDVLQSPYFFN 992