BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00009113
         (1754 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus...   616   e-174
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       575   e-161
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   554   e-155
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   551   e-154
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   529   e-147
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   529   e-147
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...   528   e-147
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   527   e-147
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   525   e-146
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   519   e-144
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   516   e-144
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun...   511   e-142
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   506   e-140
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   500   e-139
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   499   e-138
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   499   e-138
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   494   e-137
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   493   e-136
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp....   485   e-134
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   483   e-134

>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus guttatus]
          Length = 606

 Score =  616 bits (1589), Expect = e-174
 Identities = 337/504 (66%), Positives = 376/504 (74%), Gaps = 6/504 (1%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLEKLLLEAAGRT                                     GY++RKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSGRNRHSSPPSRRRRKGSYSDDGSDSKNEESDGDRGYTNRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1202
             SQVPLKKRLD A                              DLYKDEDDREKLSKLTE
Sbjct: 61   GSQVPLKKRLD-ATDRDEDRSSQEGDEDEYDHDRDSDNDSVGSDLYKDEDDREKLSKLTE 119

Query: 1201 LEREMILEARATKRSDRDLTEKLKKRKGQDRKG-SPPKAPTRSMRSKAERAGALDELVKR 1025
            LEREMILEARATKRSDRDLTEKLKKRKGQDRKG SPPK  TR+MRSKA+RAGALDELVKR
Sbjct: 120  LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDELVKR 179

Query: 1024 RRESAKGGSGKRYSPVKRRSFAAA-----TLNSPXXXXXXXXXXXXXXXXXXGLADSDDD 860
            RR++AKGGSG RYSPVKRRSFAAA      L+SP                  GL DSDDD
Sbjct: 180  RRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGDSDDD 239

Query: 859  KISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCVV 680
            K+S  SKVPTFEDI+EITIRRSKL+KWFMEP+FDELIVGCFVRVGIGKSRSG IYRLCVV
Sbjct: 240  KVS--SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRLCVV 297

Query: 679  RNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEEFDQWMREVER 500
            RNVDATDPDR+YK DNKTT K+LNVVWG++SSAARWQMAM+SDS P +EEFDQW++EVER
Sbjct: 298  RNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKEVER 357

Query: 499  SGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRPLNVAAEKDRLRRSLE 320
            +GGH+P+KQEV++K+DAIQ+ NT+VY AATVKQM++EKK                 RSLE
Sbjct: 358  NGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQMLQEKK-----------------RSLE 400

Query: 319  VAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNRVENFKNASELRPVNA 140
            VAKEN+D+AEVERIK RL+ELE+SR+ LEK+SKA+KLAEMNR+NRVENFKNASE++PV  
Sbjct: 401  VAKENEDDAEVERIKARLQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTI 460

Query: 139  GLKAGEAGYDPFSRRWTRSRNYYV 68
            GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 461  GLKAGEAGYDPFSRRWTRSRNYYV 484


>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  575 bits (1482), Expect = e-161
 Identities = 305/500 (61%), Positives = 362/500 (72%), Gaps = 2/500 (0%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLEKLLLEAAGRT                                      YS RKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSERNRPPSRRRRKHSNSDGGSDSRNDDSDGDHH---YSQRKPS 57

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1202
            +SQVPLKKR DP                                LYKDE+DREKLSKLTE
Sbjct: 58   SSQVPLKKRFDPTDRDDRSSQDGDEINSNHERDSDNDTIGSD--LYKDEEDREKLSKLTE 115

Query: 1201 LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSM-RSKAERAGALDELVKR 1025
            LEREMILE RATK SDRDLTEKLKKRKG D+K SP KA TRS  RSKAERAGALDELVKR
Sbjct: 116  LEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDELVKR 175

Query: 1024 RRESAKGGSGK-RYSPVKRRSFAAATLNSPXXXXXXXXXXXXXXXXXXGLADSDDDKISA 848
            RR++ KGG+ + RYSPVKRRSF AATL+SP                  G+ DSD+DK  +
Sbjct: 176  RRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDEDKTQS 235

Query: 847  ESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVD 668
            +S VPTF+DI+EIT++RSKL KWFMEP+FDELI+GCFV+VGIGKSRSG +YRLCVVRNVD
Sbjct: 236  QSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVVRNVD 295

Query: 667  ATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEEFDQWMREVERSGGH 488
            ++DP R Y F+N+ THKYL++VWG++SSAARWQM MIS+  P +EEFD W +EVER+GG+
Sbjct: 296  SSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREEFDLWFKEVERTGGN 355

Query: 487  LPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRPLNVAAEKDRLRRSLEVAKE 308
            +P++QEV +K++A+Q+ N +VY AATVKQMV+EKKSAT +P+NVA EKDRLRR++EVA+E
Sbjct: 356  MPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPINVALEKDRLRRAMEVARE 415

Query: 307  NKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNRVENFKNASELRPVNAGLKA 128
            N D  E++ I+ +L ELE+SR+V EKDSKA KLAEMN +NR  NFKNASE++PVN  LKA
Sbjct: 416  NDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRKANFKNASEMKPVNTSLKA 475

Query: 127  GEAGYDPFSRRWTRSRNYYV 68
            GE GYDPFSRRWTRSRNYYV
Sbjct: 476  GEVGYDPFSRRWTRSRNYYV 495


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  554 bits (1428), Expect = e-155
 Identities = 298/466 (63%), Positives = 349/466 (74%), Gaps = 22/466 (4%)
 Frame = -2

Query: 1402 YSSRKPSASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRE 1223
            YS RK S SQVPLKKRLDP                               DLYKD+DDR+
Sbjct: 54   YSGRKLSGSQVPLKKRLDP-QERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQ 112

Query: 1222 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK------- 1064
            KL+++TELEREMIL  RA K+SDR L +K+ K + Q RK S P + +R MRS        
Sbjct: 113  KLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRA 172

Query: 1063 AERAGALDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXX 929
            A+R  AL+E+  +R             R++A+ GSG R YSP+KRRSF AA+L +SP   
Sbjct: 173  ADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRG 232

Query: 928  XXXXXXXXXXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 749
                           G+ DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELI
Sbjct: 233  ESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292

Query: 748  VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 569
            VGCFVRVGIG+SRSGPIYRLCVVRNVDA+DP+RQYK +NKTT K+LNVVWGN++SAARWQ
Sbjct: 293  VGCFVRVGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352

Query: 568  MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 389
            MAMISDSPPL++EFDQW+REVERSGG +PSKQ+VL+KK+AIQK NT+VY A TVKQM+++
Sbjct: 353  MAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412

Query: 388  KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 209
            KKSATWRPLNVAAEKDRLRR +EVAK   DEAEVERIK RL+ELE SR+V EKD KA +L
Sbjct: 413  KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRL 472

Query: 208  AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            AEMNR+NRVENFKNASELRPVN  LKAGEAGYDPFSRRWTRS NY+
Sbjct: 473  AEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYF 518


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  551 bits (1420), Expect = e-154
 Identities = 295/466 (63%), Positives = 349/466 (74%), Gaps = 22/466 (4%)
 Frame = -2

Query: 1402 YSSRKPSASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRE 1223
            YS RK S SQVPLKKRLDP                               DLYKD+DDR+
Sbjct: 54   YSGRKLSGSQVPLKKRLDP-QERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQ 112

Query: 1222 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK------- 1064
            KL+++TELEREMIL  RA K+SDR L +K+ K + Q RK S P + +R MRS        
Sbjct: 113  KLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRA 172

Query: 1063 AERAGALDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXX 929
            A+R  AL+E+  +R             R++A+ GSG R YSP+KRRSF AATL +SP   
Sbjct: 173  ADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRG 232

Query: 928  XXXXXXXXXXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 749
                           G+ DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELI
Sbjct: 233  ESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292

Query: 748  VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 569
            VGCFVRVGIG+SRSGPIYRLCVVRNVD++DP+RQYK +NKTT K+LNVVWGN++SAARWQ
Sbjct: 293  VGCFVRVGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352

Query: 568  MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 389
            MAM+SDSPPL++EFDQW+REVERSGG +PSKQ+VL+KK+AIQK NT+VY A TVKQM+++
Sbjct: 353  MAMVSDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412

Query: 388  KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 209
            KKSATWRPLNVAAEKDRLRR +EVAK   DEAEVERIK RL+EL+ SR+V EKD KA +L
Sbjct: 413  KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRL 472

Query: 208  AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            AEMNR+NRVENFKNASELRPVN  LKAG+AGYDPFSRRWTRS NY+
Sbjct: 473  AEMNRKNRVENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYF 518


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  529 bits (1363), Expect = e-147
 Identities = 292/524 (55%), Positives = 357/524 (68%), Gaps = 27/524 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDREKLSKL 1208
             SQVPLKKRLDP                                  LYKDEDDR KLS++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1207 TELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG-- 1049
            TEL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179

Query: 1048 ----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXX 917
                AL+EL  +R            RE+++    + +SP KR++F + +L+S        
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239

Query: 916  XXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 743
                          +ADSDDD+  A S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 742  CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 563
            CFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 562  MISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKK 383
            M+SDS P++EEF QW++EV+ SGG +PSKQ+VL+KK AIQK  T+VY AATVKQM++EKK
Sbjct: 360  MVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 382  SATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAE 203
            SA+ RPLNVAAEKDRLRR LE+A+   DEAEVERIKTRL+ELEASR+  +KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479

Query: 202  MNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            MNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 480  MNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYY 523


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  529 bits (1363), Expect = e-147
 Identities = 291/524 (55%), Positives = 355/524 (67%), Gaps = 27/524 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDREKLSKL 1208
             SQVPLKKRLDP                                  LYKDEDDR KLS++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1207 TELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG-- 1049
            TEL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRS 179

Query: 1048 ----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXX 917
                AL+EL  +R            RE+++    + +SP KR+ F + +L+S        
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESES 239

Query: 916  XXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 743
                          + DSDDD+  A S+ P+F+D++EITIRRSKLAKWFMEP+F+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 742  CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 563
            CFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 562  MISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKK 383
            M+SDS PL+EEF QW++EV+RSGG +PSKQ+VL+KK AIQK  T+VY AATVKQM++EKK
Sbjct: 360  MVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 382  SATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAE 203
            SA+ RPLNVAAEKDRLRR LE+A+   DEAEVERIKTRL ELEASR+  +KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAE 479

Query: 202  MNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            MNR+NR ENFKNASE++PVN GLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 480  MNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYY 523


>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|590624750|ref|XP_007025692.1| PAF1 complex component
            isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
            PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  528 bits (1360), Expect = e-147
 Identities = 292/528 (55%), Positives = 354/528 (67%), Gaps = 30/528 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                     GY+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 1211
             SQVPLKKRLDPA                                  LYK+EDDR KL++
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 1210 LTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG- 1049
            +TELERE+IL  RA KR D+  TEK++ ++  DR     K +PP   +R +RS A  A  
Sbjct: 121  MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 1048 ------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXX 926
                  AL+EL  +R            R++++G SG R  SPVKR+ F A++L+S     
Sbjct: 181  AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 925  XXXXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDEL 752
                             + DSDDD+       PTF+DI+EITIRRSKLAKWFMEP+F+EL
Sbjct: 241  SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 751  IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 572
            IVGC+VRVGIG+S+SGPIYRLC+VRNVDAT+P+R YK +NKTT+KYLNVVWGN+SSAARW
Sbjct: 301  IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 571  QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 392
            QMAMISDSPP +EEF Q +RE+ERSGG +PSKQ+VL+KK+A+QK  T+VY AATVKQM++
Sbjct: 361  QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 391  EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 212
            EKKS + RPLN+AAEKDRLRR LE+A+   DEAEVERIK RL++LEASR+  EKD+KA++
Sbjct: 421  EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 211  LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            LAEMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 481  LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYV 528


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  527 bits (1357), Expect = e-147
 Identities = 291/527 (55%), Positives = 359/527 (68%), Gaps = 29/527 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                     GYSSRKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 1211
             SQVPLKKRLDP                                   LYK+EDDR KL++
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 1210 LTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG- 1049
            ++ELEREMIL  RA K+ D++LTE+++ ++  +R     K +PP   +R +R+ A  A  
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 1048 ------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXX 926
                  AL+EL  RR            R++++ GSG R +SP+KR+ F +A+L+S     
Sbjct: 181  AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240

Query: 925  XXXXXXXXXXXXXXG-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 749
                          G +ADSDDD     S+ PTF+DIREITIRRSKLAKWFMEP+F+ELI
Sbjct: 241  ESRSHSEDEGSTGDGGMADSDDDG-EPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299

Query: 748  VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 569
            VGCFVRVGIG+S+SGPIYRLC+VRNVDA DPDR YK +NKTT+KYLNV+WGN+SSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 568  MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 389
            MAMISDS P ++E+ QW+REVERSGG +P+KQ++L+KK+AI+K NT+VY AATVKQM++E
Sbjct: 360  MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419

Query: 388  KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 209
            KKSA+ RPLNVAAEKDRLRR LEVA+  +D+AEVERI+ R++ELEASR+   KD+KAI+L
Sbjct: 420  KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479

Query: 208  AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            AEMNR+NR ENF+NASEL+PVN  LKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYV 526


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  525 bits (1352), Expect = e-146
 Identities = 289/525 (55%), Positives = 354/525 (67%), Gaps = 28/525 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 1211
             SQVPLKKRLDP+                                  LYKDEDDR KLS+
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 1210 LTELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG- 1049
            +TEL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A  
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADR 179

Query: 1048 -----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXX 920
                 AL+EL  +R            RE+++    + +SP KR+ F + +L+S       
Sbjct: 180  SAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESE 239

Query: 919  XXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIV 746
                           + DSDDD+    S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIV
Sbjct: 240  SRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIV 299

Query: 745  GCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQM 566
            GCFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQM
Sbjct: 300  GCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQM 359

Query: 565  AMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEK 386
            AM+SDS PL+EEF QW++EV+RSGG +P+KQ+VL+KK AIQK  T+VY AATVKQM++EK
Sbjct: 360  AMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEK 419

Query: 385  KSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLA 206
            KSA+ RPLNVAAEKDRLRR LE+A+   DEAEV+RIK RL+ELEASR   +KD+KA+KLA
Sbjct: 420  KSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLA 479

Query: 205  EMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            EMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 480  EMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYY 524


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  519 bits (1336), Expect = e-144
 Identities = 291/527 (55%), Positives = 354/527 (67%), Gaps = 29/527 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSSRKP 1385
            MADLE LLLEAAGRT                                       Y SRKP
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 1384 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLS 1214
            S SQVPLKKRLDP                                   LYKDEDDR KLS
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120

Query: 1213 KLTELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG 1049
            +++EL+REMIL  RA+K+ D+ L  K+  K+ KG+     K SPP + +R MR+ A  A 
Sbjct: 121  EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASARSAD 179

Query: 1048 ------ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXX 923
                  AL+EL  +R            RE+++    +R+SP KR+SF +A L+S      
Sbjct: 180  RSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDS 239

Query: 922  XXXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 749
                            +ADSDDD+  + S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELI
Sbjct: 240  DSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELI 299

Query: 748  VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 569
            VGCFVRVGIG+S++GPIYRLC+V+NVD++DPDRQYK +N+TTHKYLNVVWGN+SSAARWQ
Sbjct: 300  VGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAARWQ 359

Query: 568  MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 389
            MAM+SDS PL+EEF QW++EVERSGG +P+KQ+VL+KK AIQK  T+VY A TVKQM++E
Sbjct: 360  MAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQMLQE 419

Query: 388  KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 209
            KKS++ RPLNVAAEKDRLRR +E+A+   DEAEVERIKTR++ELEASR    KD+KA+KL
Sbjct: 420  KKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKALKL 479

Query: 208  AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            AEMNR+NR ENFKNASELRPVN GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 480  AEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYV 526


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  516 bits (1330), Expect = e-144
 Identities = 284/524 (54%), Positives = 353/524 (67%), Gaps = 26/524 (4%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MA+LE LLLEAAGRT                                     GY++RKPS
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1202
             SQVPLKKRLDP                               DLYKD+DDR KL+++TE
Sbjct: 61   GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120

Query: 1201 LEREMILEARATKRSDRDLTEKLKKR---KG---QDRKGSP-PKAPTRSMRSKAERAGAL 1043
            L+REMIL  RA+K+ D++L EKL+ +   KG   Q RK +P P +  RS    A+RA A 
Sbjct: 121  LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAAAK 180

Query: 1042 DELVK----------------RRRESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXXXX 914
            D+ +                 + R++++GGSG R     KR+S+ A +L+S         
Sbjct: 181  DDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESE 240

Query: 913  XXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 740
                         + DSDD++    S+  TF+DI+E+T+RRSKLAKW MEP+F+ELIVGC
Sbjct: 241  SQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGC 300

Query: 739  FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 560
            FVRVGIG+S+SGPIYRLC+VRNVDA++PDRQYK DNK THKYLNVVWGN++SAARWQMAM
Sbjct: 301  FVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAM 360

Query: 559  ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 380
            +SDS P +EEF QW+REVERSGG +P+K ++LDKK++I+K NT+VY AATVKQM++EKKS
Sbjct: 361  VSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKS 420

Query: 379  ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 200
            A+ RPLN+A EKDRLRR LEVA+   DE EV+RIKTRL+ELEASR+  + D+KAI+LAEM
Sbjct: 421  ASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRLAEM 480

Query: 199  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            NR+NRVENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 481  NRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYV 524


>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
            gi|462413781|gb|EMJ18830.1| hypothetical protein
            PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  511 bits (1315), Expect = e-142
 Identities = 283/519 (54%), Positives = 346/519 (66%), Gaps = 21/519 (4%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                     GY+SRKPS
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDREKLSKL 1208
             +QVPLKKRLDP                                  LYKDEDDR KL+++
Sbjct: 61   GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120

Query: 1207 TELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSKAERAGALDELV- 1031
            +EL+RE+IL  RA K+ D+ L EK + +K        P +  RS    A+RA A D+ + 
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKK---ETPPLPSSRVRSSARSADRAAAKDDALN 177

Query: 1030 ---------------KRRRESAKGGSGKR-YSPVKRRSFAAA--TLNSPXXXXXXXXXXX 905
                           ++ R++++G SG R +S + R+SF A   + +S            
Sbjct: 178  ELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDSRSHSED 237

Query: 904  XXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVG 725
                    + DSDD++    S+  TF+DI+EITIRRSKLAKW MEP+F+ELIVGCFVRVG
Sbjct: 238  DGSTGEDPMMDSDDER----SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVG 293

Query: 724  IGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSP 545
            IG+S+SGPIYRLC+VRNVDA+DPDR+YK +NKTTHKYLNVVWGN++SAARWQMAMISDS 
Sbjct: 294  IGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSA 353

Query: 544  PLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRP 365
            PL+EEF QW+REVERSGG LPSKQ+VL+KK+AI+K NT+VY AATVKQM++EKKSA+ RP
Sbjct: 354  PLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRP 413

Query: 364  LNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNR 185
            LN+A EKDRLRR LEVA+   D+AEVERIKTRL++LEA R+   KDSKA++LAEMNR+NR
Sbjct: 414  LNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNR 473

Query: 184  VENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            VENFKNASEL+PV  GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 474  VENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYV 512


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  506 bits (1303), Expect = e-140
 Identities = 281/527 (53%), Positives = 352/527 (66%), Gaps = 29/527 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                     GY+SRKPS
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 1211
             SQVPLKKRLDP                                   LYKD+DDR KL+ 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 1210 LTELEREMILEARATKRSDRDLTEKLKKR--KGQD---RKGSPP--KAPTRSMRSKAERA 1052
            ++EL+REMIL  RA+K++D+ L E L+ +  KG+    RK +PP   +  RS    A+RA
Sbjct: 121  MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 1051 GALDELV----------------KRRRESAKGGSG-KRYSPVKRRSFAAATLNSPXXXXX 923
             A D+ +                ++ R++++G +  +R+SP KR+ F A +L+S      
Sbjct: 181  AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 922  XXXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 749
                            + DSDD++    S  PTFEDI+E+TIRRSKLAKW MEP+F+ELI
Sbjct: 241  ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 748  VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 569
            VGCFVRVGIG+SRSGPIYRLC+VRNVDAT+PDRQYK +NK THKYLNV+WGN++SAARWQ
Sbjct: 301  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 568  MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 389
            MAM+SDS PL++E+ QW++EVER+GG + SKQ++L+KK+AIQK N +VY AATVKQM+++
Sbjct: 361  MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 388  KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 209
            KKSA+ RPLN+AAEKDRLRR ++VA    DEAEVERIKTRL++LEASRR+  KD+KAI+L
Sbjct: 421  KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 208  AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            AEMNR+NRVENFKNASELRP+   LKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 481  AEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYV 526


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  500 bits (1287), Expect = e-139
 Identities = 278/528 (52%), Positives = 351/528 (66%), Gaps = 30/528 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSSRKP 1385
            MADLE LLLEAAGRT                                       Y++RKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 1384 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLS 1214
            S SQVPLKKRL+                                    LYKDEDDR+KL+
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 1213 KLTELEREMILEARATKRSDRDLTEKLKKRKGQD-----RKGSPPKAPTRSMRSKAERAG 1049
            +++EL+RE+IL  RA K+ D+ LTEK++ ++  D     RK +PP   +R +RS A  A 
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 1048 -------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXX 929
                   AL+EL  +R            R+ ++G +G R +S VK+ +F +A+L+S    
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240

Query: 928  XXXXXXXXXXXXXXXG-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDEL 752
                           G +ADSD+D +   SK PT+EDI+EITIRR+KLAKWFMEP+F+EL
Sbjct: 241  SGSRSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299

Query: 751  IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 572
            I+GCFVRVGIG+S+SGP+YRLC+VRNVDA +PD+ YK +NK+T+KYLNV WG D+SAARW
Sbjct: 300  IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359

Query: 571  QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 392
            QMAM+SDS P +EE+ QW+REVE  GG LPSKQ++L+KK+AI+K NT+VY AATVKQM++
Sbjct: 360  QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419

Query: 391  EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 212
            EKKSA+ RPLNVAAEKDRLRR LE+A+   DEAEVERI  R++ELEASR    KD+KAI+
Sbjct: 420  EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479

Query: 211  LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            LAEMNR+NRVENF+NASE++PVN GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 480  LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYV 527


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 653

 Score =  499 bits (1286), Expect = e-138
 Identities = 282/527 (53%), Positives = 347/527 (65%), Gaps = 30/527 (5%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLEKLLLEAAGR                                       Y  RKPS
Sbjct: 1    MADLEKLLLEAAGRNIHSLTPSRRKRRGEFLDGGSDSGDDDSDDDGDDHG---YRGRKPS 57

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1202
            A+QVPLKKR + +                               LYKDEDDR+KLS++TE
Sbjct: 58   ATQVPLKKRFETSGKDDDVSGDDDGSDREGDSSEDSDVGDD---LYKDEDDRQKLSEMTE 114

Query: 1201 LEREMILEARATKRSDRDLTEKL--KKRKGQ----DRKGSPP--------KAPTRSMRSK 1064
            L+REMIL  RA+K+ D+D   K+  K+ KG      R+ SPP        +A  RS    
Sbjct: 115  LQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADRS 174

Query: 1063 AERAGALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXX 920
            A + GAL+EL  +R            +E +K G G+    +K + FA+  L+S       
Sbjct: 175  AAKDGALNELRAKRLKQLDPEAKLKLKEGSKSG-GRGLFSLKGKPFASTGLSSSSHSDSD 233

Query: 919  XXXXXXXXXXXXG--LADSDDDKISAES--KVPTFEDIREITIRRSKLAKWFMEPYFDEL 752
                           + DSDDD+I   S  +VP+FEDI+EITIRRSKLAKWFMEP+F+EL
Sbjct: 234  SRSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEEL 293

Query: 751  IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 572
            IVGCFVRVGIG+S++GPIYRLC+V+NVDA+DPDRQYK DNKTT+KYLNVVWGN++SAARW
Sbjct: 294  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAARW 353

Query: 571  QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 392
            QMAM+SDSPPL+EEF QW++EVERSGG +  K +V++K  AIQK N++VY AATVKQM++
Sbjct: 354  QMAMVSDSPPLEEEFKQWVKEVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMIE 413

Query: 391  EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 212
            EKKS + RPLNVAAEKDRL+R LE+A+  KD AEVE+IKTRL+ELEASR+   KD+KA++
Sbjct: 414  EKKSNSRRPLNVAAEKDRLKRQLEIAESKKDAAEVEKIKTRLQELEASRKTQAKDAKALR 473

Query: 211  LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            L+EMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 474  LSEMNRKNRFENFKNASELKPVNKGLKAGEAGYDPFSRRWTRSRNYY 520


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  499 bits (1284), Expect = e-138
 Identities = 276/530 (52%), Positives = 351/530 (66%), Gaps = 32/530 (6%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSSRKP 1385
            MADLE LLLEAAGRT                                       Y+SRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60

Query: 1384 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLS 1214
            S SQVPLKKRL+                                    LYKDEDDR+KL+
Sbjct: 61   SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120

Query: 1213 KLTELEREMILEARATKRSDRDLTEKLKKRKGQD-----RKGSPPKAPTRSMRSKAERAG 1049
            +++EL+RE+IL  RA K+ D+ LTEK++ ++  D     RK +PP   +R +RS A  A 
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 1048 -------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXX 929
                   AL+EL  +R            R++++G +G R ++ VK+ +F +A L+S    
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240

Query: 928  XXXXXXXXXXXXXXXG---LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFD 758
                           G   +ADSD+D     S+ PT+EDI+EITIRR+KLAKWFMEP+F+
Sbjct: 241  SESGSRSHSEDEGSTGDGGMADSDEDG-DPGSRGPTYEDIKEITIRRTKLAKWFMEPWFE 299

Query: 757  ELIVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAA 578
            ELI+GCFVRVGIG+S++GP+YRLC+VRNVDA +PD+ YK +NK+T+KYLNV WG DSSAA
Sbjct: 300  ELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAA 359

Query: 577  RWQMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQM 398
            RWQMAM+SDS P +EE+ QW+RE ER GG LPSKQ++L+KK+AI+K NT+VY AATVKQM
Sbjct: 360  RWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQM 419

Query: 397  VKEKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKA 218
            ++EKKSA+ RPLNVAAEKDRLRR LE+A+   DEAEVERI+ R+ ELEASR+   KD+KA
Sbjct: 420  LQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKA 479

Query: 217  IKLAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            ++LAEMNR+NRVENF+NASEL+P+N GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 480  LRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYV 529


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  494 bits (1272), Expect = e-137
 Identities = 278/524 (53%), Positives = 342/524 (65%), Gaps = 26/524 (4%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                      Y SRKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPS 58

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1202
             SQVPLKKRLDPA                                  +E D +   ++TE
Sbjct: 59   GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 1201 LEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGAL 1043
            LEREM++  R  K+ D++L +K + R+ +      K +PP   +RS R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 1042 DELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXXX 914
            D+ +                +R R++++GGSG R  SPVKR++F  A L+S         
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 913  XXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 740
                         +ADSDDD      + PT++DI+EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 739  FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 560
            FVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 559  ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 380
            +SDSPPL+EEF QW+REVER+GG +PSKQ+VL+KK++IQK NT+VY AATVKQM++EKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409

Query: 379  ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 200
            A+ RPLNVAAEKDRLRR LEVA+   D+ ++ERIK RL+ELEASR    KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 199  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            NR+NRVENFKNASEL+ VN  LKAGEAGYDPFSRRWTRSRNYY+
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYI 513


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  493 bits (1269), Expect = e-136
 Identities = 278/524 (53%), Positives = 340/524 (64%), Gaps = 26/524 (4%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            MADLE LLLEAAGRT                                      Y SRKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPS 58

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1202
             SQVPLKKRLDP                                   +E D +   ++TE
Sbjct: 59   GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 1201 LEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGAL 1043
            LEREM++  R  K+ D++L +K + R+ +      K +PP   +RS R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 1042 DELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXXX 914
            D+ +                +R R++++GGSG R  SPVKR++F  A L+S         
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 913  XXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 740
                         +ADSDDD      + PT++DI+EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 739  FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 560
            FVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 559  ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 380
            +SDSPPL+EEF QW+REVER+ G +PSKQ+VL+KKD+IQK NT+VY AATVKQM++EKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKS 409

Query: 379  ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 200
            A+ RPLNVAAEKDRLRR LEVA+   DE ++ERIK RL+ELEASR    KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 199  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYV 68
            NR+NRVENFKNASEL+ VN  LKAGEAGYDPFSRRWTRSRNYY+
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYI 513


>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
            gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
            [Arabidopsis lyrata subsp. lyrata]
          Length = 643

 Score =  485 bits (1248), Expect = e-134
 Identities = 269/523 (51%), Positives = 343/523 (65%), Gaps = 26/523 (4%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            M DLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDRG---YASRKPS 57

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-LYKDEDDREKLSKLT 1205
             SQVPLKKRL+                                D LYK+E+DR+KL+ +T
Sbjct: 58   GSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 117

Query: 1204 ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 1049
            E +REMIL  RA K+ D++ TEKL+ ++  ++     K + P   +R +RS A  A    
Sbjct: 118  EFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAA 177

Query: 1048 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 920
                AL+EL  +R            R+++KGGSG R +S +KR+  A++ L+S       
Sbjct: 178  AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQSDSD 237

Query: 919  XXXXXXXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 740
                        G+ DSDDD+    S VPTFED++EITIRRSKLAKW MEP+F+ELIVGC
Sbjct: 238  SRSQSDDEGSNAGMLDSDDDR----SDVPTFEDVKEITIRRSKLAKWLMEPFFEELIVGC 293

Query: 739  FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 560
            FVRVGIG+S+SGPIYRLC V+NVDATDPD+ YK +NKTTHKYLNVVWGN++SAARWQMAM
Sbjct: 294  FVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAM 353

Query: 559  ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 380
            ISD  PL+EE+ QW+REVER+ G +P+KQ++ +KK+AIQ+ N++VY A TVKQM++EKKS
Sbjct: 354  ISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRINSFVYSAETVKQMLQEKKS 413

Query: 379  ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 200
            A+ RP+NVAAEKDRLR+ LE+A+   DEA VERIKT++K+L+ASR     D KA+KLAEM
Sbjct: 414  ASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDASRNKKGVDKKALKLAEM 473

Query: 199  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            N++NR ENFKNASE++ ++A LKAGEAGYDPFSRRWTRS NYY
Sbjct: 474  NKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSSNYY 516


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
            gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
            78902-80833 [Arabidopsis thaliana]
            gi|332195649|gb|AEE33770.1| Paf1C-like transcription
            factor [Arabidopsis thaliana]
          Length = 643

 Score =  483 bits (1244), Expect = e-134
 Identities = 267/523 (51%), Positives = 341/523 (65%), Gaps = 26/523 (4%)
 Frame = -2

Query: 1561 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 1382
            M DLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDRG---YASRKPS 57

Query: 1381 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-LYKDEDDREKLSKLT 1205
             SQVPLKKRL+                                D LYK+E+DR+KL+ +T
Sbjct: 58   GSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 117

Query: 1204 ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 1049
            E +REMIL  RA K+ D++ TEKL+ ++  ++     K + P   +R +RS A  A    
Sbjct: 118  EFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRAA 177

Query: 1048 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 920
                AL+EL  +R            R+++KGGSG R +S  KR+  A++ L+S       
Sbjct: 178  AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDSD 237

Query: 919  XXXXXXXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 740
                        G+ DSDDD+    S VPTFED++E+TIRRSKLAKW MEP+F+ELIVGC
Sbjct: 238  SRSQSDDEGSNGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGC 293

Query: 739  FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 560
            FVRVGIG+S+SGPIYRLC V+NVDATDPD+ YK +NKTTHKYLNVVWGN++SAARWQMAM
Sbjct: 294  FVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAM 353

Query: 559  ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 380
            ISD  PL+EE+ QW+REVER+ G +P+KQ++ +KK+AIQ+ N++VY A TVKQM++EKKS
Sbjct: 354  ISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKKS 413

Query: 379  ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 200
            A+ RP+NVAAEKDRLR+ LE+A+   DEA VERIK+++K+L+ASR     D KA+KLAEM
Sbjct: 414  ASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAEM 473

Query: 199  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYY 71
            N++NR ENFKNASE++ + A LKAGEAGYDPFSRRWTRS NYY
Sbjct: 474  NKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYY 516