BLASTX nr result
ID: Mentha26_contig00008902
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00008902
(606 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU32634.1| hypothetical protein MIMGU_mgv1a001237mg [Mimulus... 219 4e-55
ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ... 196 3e-48
ref|XP_006437488.1| hypothetical protein CICLE_v10030612mg [Citr... 196 4e-48
ref|XP_006484634.1| PREDICTED: pre-mRNA-processing protein 40C-l... 194 1e-47
ref|XP_007045322.1| Pre-mRNA-processing protein 40C [Theobroma c... 194 2e-47
ref|XP_002315059.2| hypothetical protein POPTR_0010s17750g [Popu... 192 8e-47
ref|XP_007221939.1| hypothetical protein PRUPE_ppa001490mg [Prun... 189 7e-46
ref|XP_004505734.1| PREDICTED: pre-mRNA-processing protein 40C-l... 187 2e-45
gb|EXC33082.1| Transcription elongation regulator 1 [Morus notab... 187 3e-45
ref|XP_004297757.1| PREDICTED: pre-mRNA-processing protein 40C-l... 187 3e-45
ref|XP_006592054.1| PREDICTED: pre-mRNA-processing protein 40C-l... 186 4e-45
ref|XP_006592053.1| PREDICTED: pre-mRNA-processing protein 40C-l... 186 4e-45
ref|XP_003540642.1| PREDICTED: pre-mRNA-processing protein 40C-l... 186 4e-45
ref|XP_002272014.2| PREDICTED: transcription elongation regulato... 182 8e-44
ref|XP_006590813.1| PREDICTED: pre-mRNA-processing protein 40C-l... 179 4e-43
ref|XP_006590812.1| PREDICTED: pre-mRNA-processing protein 40C-l... 179 4e-43
ref|XP_002311295.1| FF domain-containing family protein [Populus... 178 9e-43
ref|XP_006360861.1| PREDICTED: pre-mRNA-processing protein 40C-l... 178 1e-42
ref|XP_006360860.1| PREDICTED: pre-mRNA-processing protein 40C-l... 178 1e-42
ref|XP_006360858.1| PREDICTED: pre-mRNA-processing protein 40C-l... 178 1e-42
>gb|EYU32634.1| hypothetical protein MIMGU_mgv1a001237mg [Mimulus guttatus]
Length = 858
Score = 219 bits (559), Expect = 4e-55
Identities = 107/152 (70%), Positives = 127/152 (83%), Gaps = 4/152 (2%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+ S+ KL+KDPQGRAANP+LDKSDLEK FR+HVKSL ERCV +FRALL +
Sbjct: 707 ETIKDPQASWTASKPKLDKDPQGRAANPHLDKSDLEKLFREHVKSLHERCVGEFRALLTD 766
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
ITAE +A+E+ED KT++TSWSTAK +LKSDPRYNKM RKERE+LWRRH++EI RK KKD
Sbjct: 767 VITAEASARETEDGKTVITSWSTAKQVLKSDPRYNKMPRKERESLWRRHSEEIQRKLKKD 826
Query: 244 QDQGEKPEDGKTKT----GKHSSASRRPYDRR 161
DQGEKP +GK++ GKH S S R + RR
Sbjct: 827 SDQGEKPVEGKSRASAEPGKHLSGSGRTHHRR 858
>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
PRP40, putative [Ricinus communis]
Length = 886
Score = 196 bits (499), Expect = 3e-48
Identities = 95/154 (61%), Positives = 116/154 (75%), Gaps = 6/154 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+ES+ +LEKDPQGR NPNLD SD EK FR+HVK L ERC +F+ALLAE
Sbjct: 733 ETIKDPQASWTESKTRLEKDPQGRGTNPNLDPSDTEKLFREHVKMLHERCTNEFKALLAE 792
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
I AE A+Q++ED KT+L SW+TAK +LK DPRYNKM RKERE LWRRHA+++LRKQK
Sbjct: 793 VINAEAASQKTEDGKTVLDSWTTAKRVLKLDPRYNKMPRKEREVLWRRHAEDMLRKQKTT 852
Query: 244 QDQGE------KPEDGKTKTGKHSSASRRPYDRR 161
D+ E + T +G+H S S+R +DRR
Sbjct: 853 LDEKEDKHTDPRGRSSTTDSGRHLSGSKRTHDRR 886
>ref|XP_006437488.1| hypothetical protein CICLE_v10030612mg [Citrus clementina]
gi|557539684|gb|ESR50728.1| hypothetical protein
CICLE_v10030612mg [Citrus clementina]
Length = 1015
Score = 196 bits (498), Expect = 4e-48
Identities = 100/153 (65%), Positives = 117/153 (76%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+ESR KLEKDPQGRA N +LD SD EK FR+H+K+L ERC DFR LLAE
Sbjct: 863 ETIKDPQASWTESRPKLEKDPQGRATNADLDSSDREKLFREHIKTLYERCAHDFRGLLAE 922
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
ITAE AAQE+ED KT+L SWSTAK +LK DPRY+KM RKERE LWRRHA+EI RK K
Sbjct: 923 VITAEAAAQETEDGKTVLNSWSTAKRVLKPDPRYSKMPRKEREALWRRHAEEIQRKHKSS 982
Query: 244 QDQGE-KPEDGKTKT----GKHSSASRRPYDRR 161
DQ E +D K+++ G+ S+SRR +RR
Sbjct: 983 LDQNEDNHKDSKSRSSTDGGRPPSSSRRNQERR 1015
>ref|XP_006484634.1| PREDICTED: pre-mRNA-processing protein 40C-like [Citrus sinensis]
Length = 978
Score = 194 bits (494), Expect = 1e-47
Identities = 99/153 (64%), Positives = 117/153 (76%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+ESR KLEKDPQGRA N +LD SD EK FR+H+K+L ERC DFR LLAE
Sbjct: 826 ETIKDPQASWTESRPKLEKDPQGRATNADLDSSDREKLFREHIKTLYERCAHDFRGLLAE 885
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
ITAE AAQE+ED KT+L SWSTAK +LK +PRY+KM RKERE LWRRHA+EI RK K
Sbjct: 886 VITAEAAAQETEDGKTVLNSWSTAKRVLKPEPRYSKMPRKEREALWRRHAEEIQRKHKSS 945
Query: 244 QDQGE-KPEDGKTKT----GKHSSASRRPYDRR 161
DQ E +D K+++ G+ S+SRR +RR
Sbjct: 946 LDQNEDNHKDSKSRSSTDGGRPPSSSRRNQERR 978
>ref|XP_007045322.1| Pre-mRNA-processing protein 40C [Theobroma cacao]
gi|508709257|gb|EOY01154.1| Pre-mRNA-processing protein
40C [Theobroma cacao]
Length = 816
Score = 194 bits (493), Expect = 2e-47
Identities = 99/153 (64%), Positives = 118/153 (77%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+ES+ KLEKDPQGRAANP+LD SD EK FR+H+K L ERC DFRALLAE
Sbjct: 664 ETIKDPQASWTESKPKLEKDPQGRAANPDLDPSDTEKLFREHIKMLFERCTHDFRALLAE 723
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
IT + AAQE+E KT+ SWSTAK LLK DPRY+KM RKERE LWRR+A+++LRKQK
Sbjct: 724 VITQDAAAQETEGGKTVFNSWSTAKRLLKPDPRYSKMPRKEREALWRRYAEDMLRKQKSA 783
Query: 244 QDQ-GEKPEDGKTKT----GKHSSASRRPYDRR 161
DQ EK D K ++ G+ SS SR+ ++RR
Sbjct: 784 LDQEEEKRTDAKVRSSGDLGRFSSGSRKVHERR 816
>ref|XP_002315059.2| hypothetical protein POPTR_0010s17750g [Populus trichocarpa]
gi|550330031|gb|EEF01230.2| hypothetical protein
POPTR_0010s17750g [Populus trichocarpa]
Length = 963
Score = 192 bits (487), Expect = 8e-47
Identities = 97/153 (63%), Positives = 119/153 (77%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ET+KDPQASW+ES+ KL+KDPQ RA +P+LD SD EK FR+H+K L ERC DF+ALLAE
Sbjct: 811 ETLKDPQASWTESKPKLDKDPQRRATHPDLDPSDTEKLFREHMKMLHERCTNDFKALLAE 870
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
ITAE AAQ+++D KT+L SWSTAK L+K DPRYNKM RKERETLWRR+A+E+LRKQK +
Sbjct: 871 VITAETAAQKTDDGKTVLDSWSTAKRLIKPDPRYNKMPRKERETLWRRYAEEMLRKQKFE 930
Query: 244 QDQGE-KPEDGKTK----TGKHSSASRRPYDRR 161
D E K D K + +G++ S SRR DRR
Sbjct: 931 PDPKEDKHTDSKNRSANDSGRYHSGSRRTNDRR 963
>ref|XP_007221939.1| hypothetical protein PRUPE_ppa001490mg [Prunus persica]
gi|462418875|gb|EMJ23138.1| hypothetical protein
PRUPE_ppa001490mg [Prunus persica]
Length = 814
Score = 189 bits (479), Expect = 7e-46
Identities = 96/153 (62%), Positives = 117/153 (76%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+ S+ KLEKDPQ RAANP+L+ SD+EK FR+H+K L ERC +FRALLAE
Sbjct: 662 ETIKDPQASWTGSKPKLEKDPQRRAANPDLEPSDMEKLFREHIKRLNERCAHEFRALLAE 721
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+TAE A+QE+ED KT+L SWSTAK LLK DPRYNKMARKERE LWRR ++E+LRKQK
Sbjct: 722 VLTAEAASQETEDGKTVLNSWSTAKRLLKPDPRYNKMARKEREVLWRRFSEEMLRKQKSA 781
Query: 244 QDQGE-KPEDGKTK----TGKHSSASRRPYDRR 161
D E + D K++ +G+ SR +DRR
Sbjct: 782 LDHKEDRKTDAKSRSSVDSGRVPFGSRGTHDRR 814
>ref|XP_004505734.1| PREDICTED: pre-mRNA-processing protein 40C-like [Cicer arietinum]
Length = 953
Score = 187 bits (475), Expect = 2e-45
Identities = 92/153 (60%), Positives = 115/153 (75%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDP ASW+ES+ KLEKDPQGRA N +LD +D+EK FRDH+K LQERC DFRALLAE
Sbjct: 801 ETIKDPMASWTESKPKLEKDPQGRATNSDLDSADMEKLFRDHIKMLQERCAHDFRALLAE 860
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+T+E A+QE++D KT+L SWSTAK LLKSDPRYNK RK+RE LWRR+ +++LR+QK
Sbjct: 861 VLTSEAASQETDDGKTVLNSWSTAKRLLKSDPRYNKFPRKDREALWRRYVEDMLRRQKSS 920
Query: 244 QDQGE-KPEDGKTKTGKHSS----ASRRPYDRR 161
D E K D + + + SS S R ++RR
Sbjct: 921 HDSKEDKHTDARGRNSQQSSKLPLESGRSHERR 953
>gb|EXC33082.1| Transcription elongation regulator 1 [Morus notabilis]
Length = 829
Score = 187 bits (474), Expect = 3e-45
Identities = 90/154 (58%), Positives = 123/154 (79%), Gaps = 6/154 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+ES+ KLEKDPQGRA+NP+LD S++EK FR+H+K+LQERC ++++ALLAE
Sbjct: 676 ETIKDPQASWTESKSKLEKDPQGRASNPDLDSSEMEKLFREHIKTLQERCAREYKALLAE 735
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+TA+ A +E++D KT+L SWSTAK LLK DPRYNKM RK+RETLWRR+A+++LRKQ+K
Sbjct: 736 LLTADAAERETDDGKTVLNSWSTAKRLLKPDPRYNKMPRKDRETLWRRYAEDMLRKQQKS 795
Query: 244 Q--DQGEKPEDGKTKT----GKHSSASRRPYDRR 161
+ + +K D + +T G+ S R ++RR
Sbjct: 796 EPNSKEDKKIDPRNRTSVDSGRLPSGLRGTHERR 829
>ref|XP_004297757.1| PREDICTED: pre-mRNA-processing protein 40C-like [Fragaria vesca
subsp. vesca]
Length = 736
Score = 187 bits (474), Expect = 3e-45
Identities = 93/153 (60%), Positives = 117/153 (76%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQASW+E++ KLEKDPQ RAAN +L SD+EK FR+HVK L ERC +FRALLAE
Sbjct: 584 ETIKDPQASWTETKPKLEKDPQRRAANSDLSSSDMEKLFREHVKMLNERCTHEFRALLAE 643
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+T E A+QE+ED KT+L SWSTAK +LKSDPRYNKM RK+RE +W R+A+E+LRKQK
Sbjct: 644 VLTTEAASQETEDGKTVLNSWSTAKRVLKSDPRYNKMPRKDREVVWHRYAEEMLRKQKSS 703
Query: 244 QDQGE-KPEDGKTKT----GKHSSASRRPYDRR 161
D E + D K+++ G+ +S SR +DRR
Sbjct: 704 LDPREDRKSDAKSRSSADAGRATSGSRGAHDRR 736
>ref|XP_006592054.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X3 [Glycine
max]
Length = 778
Score = 186 bits (472), Expect = 4e-45
Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDP ASW+ES+ KLEKDPQ RA NP+LD SD EK FR+HVK LQERC +FR LLAE
Sbjct: 626 ETIKDPLASWTESKPKLEKDPQRRATNPDLDPSDTEKLFREHVKMLQERCAHEFRVLLAE 685
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+T++ A+QE+ D KT+L SWSTAK LLKSDPRYNK+ RKERE LWRR+A+++LR+QK
Sbjct: 686 VLTSDAASQETNDGKTVLNSWSTAKRLLKSDPRYNKVPRKEREALWRRYAEDMLRRQKAS 745
Query: 244 QD-QGEKPEDGKTKT----GKHSSASRRPYDRR 161
D + EK D K +T KH S R ++RR
Sbjct: 746 YDSREEKHTDAKGRTYLESSKHPLESGRSHERR 778
>ref|XP_006592053.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2 [Glycine
max]
Length = 854
Score = 186 bits (472), Expect = 4e-45
Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDP ASW+ES+ KLEKDPQ RA NP+LD SD EK FR+HVK LQERC +FR LLAE
Sbjct: 702 ETIKDPLASWTESKPKLEKDPQRRATNPDLDPSDTEKLFREHVKMLQERCAHEFRVLLAE 761
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+T++ A+QE+ D KT+L SWSTAK LLKSDPRYNK+ RKERE LWRR+A+++LR+QK
Sbjct: 762 VLTSDAASQETNDGKTVLNSWSTAKRLLKSDPRYNKVPRKEREALWRRYAEDMLRRQKAS 821
Query: 244 QD-QGEKPEDGKTKT----GKHSSASRRPYDRR 161
D + EK D K +T KH S R ++RR
Sbjct: 822 YDSREEKHTDAKGRTYLESSKHPLESGRSHERR 854
>ref|XP_003540642.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Glycine
max]
Length = 930
Score = 186 bits (472), Expect = 4e-45
Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDP ASW+ES+ KLEKDPQ RA NP+LD SD EK FR+HVK LQERC +FR LLAE
Sbjct: 778 ETIKDPLASWTESKPKLEKDPQRRATNPDLDPSDTEKLFREHVKMLQERCAHEFRVLLAE 837
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+T++ A+QE+ D KT+L SWSTAK LLKSDPRYNK+ RKERE LWRR+A+++LR+QK
Sbjct: 838 VLTSDAASQETNDGKTVLNSWSTAKRLLKSDPRYNKVPRKEREALWRRYAEDMLRRQKAS 897
Query: 244 QD-QGEKPEDGKTKT----GKHSSASRRPYDRR 161
D + EK D K +T KH S R ++RR
Sbjct: 898 YDSREEKHTDAKGRTYLESSKHPLESGRSHERR 930
>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis vinifera]
gi|297738259|emb|CBI27460.3| unnamed protein product
[Vitis vinifera]
Length = 1046
Score = 182 bits (461), Expect = 8e-44
Identities = 91/153 (59%), Positives = 114/153 (74%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDPQ SW+ES+ KLEKDPQ RA N +LD SDLEK FR+H+K L ER +FRALL+E
Sbjct: 894 ETIKDPQVSWTESKPKLEKDPQARATNSDLDPSDLEKLFREHIKMLHERRAHEFRALLSE 953
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+TAE A QE+ED KT+LTSWSTAK LL+SD RY KM RK+RE++WRR+++E+LRKQK
Sbjct: 954 VLTAEAATQETEDGKTVLTSWSTAKRLLRSDTRYIKMPRKDRESVWRRYSEEMLRKQKLA 1013
Query: 244 QDQGEKPED-----GKTKTGKHSSASRRPYDRR 161
QDQ E+ +G+ S SRR ++RR
Sbjct: 1014 QDQTEEKHTEVKGRSSVDSGRFPSGSRRAHERR 1046
>ref|XP_006590813.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2 [Glycine
max]
Length = 968
Score = 179 bits (455), Expect = 4e-43
Identities = 89/153 (58%), Positives = 113/153 (73%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDP SW+ES+ KLEKD Q RA NP+LD D EK FR+HVK LQERC +FR LLAE
Sbjct: 816 ETIKDPLVSWTESKPKLEKDAQRRATNPDLDPLDTEKLFREHVKMLQERCAHEFRVLLAE 875
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+T++ A+QE++D KT+L SWSTAK LLKSDPRYNK+ RKERE LWRR+A+++LR+QK
Sbjct: 876 VLTSDAASQETDDGKTVLNSWSTAKRLLKSDPRYNKVPRKEREALWRRYAEDMLRRQKAS 935
Query: 244 QDQGEKPE---DGKT--KTGKHSSASRRPYDRR 161
D E+ +G+ ++ KH S R Y+RR
Sbjct: 936 HDSREEKHTDAEGRNYLESSKHPFESGRSYERR 968
>ref|XP_006590812.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Glycine
max]
Length = 980
Score = 179 bits (455), Expect = 4e-43
Identities = 89/153 (58%), Positives = 113/153 (73%), Gaps = 5/153 (3%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ETIKDP SW+ES+ KLEKD Q RA NP+LD D EK FR+HVK LQERC +FR LLAE
Sbjct: 828 ETIKDPLVSWTESKPKLEKDAQRRATNPDLDPLDTEKLFREHVKMLQERCAHEFRVLLAE 887
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
+T++ A+QE++D KT+L SWSTAK LLKSDPRYNK+ RKERE LWRR+A+++LR+QK
Sbjct: 888 VLTSDAASQETDDGKTVLNSWSTAKRLLKSDPRYNKVPRKEREALWRRYAEDMLRRQKAS 947
Query: 244 QDQGEKPE---DGKT--KTGKHSSASRRPYDRR 161
D E+ +G+ ++ KH S R Y+RR
Sbjct: 948 HDSREEKHTDAEGRNYLESSKHPFESGRSYERR 980
>ref|XP_002311295.1| FF domain-containing family protein [Populus trichocarpa]
gi|222851115|gb|EEE88662.1| FF domain-containing family
protein [Populus trichocarpa]
Length = 283
Score = 178 bits (452), Expect = 9e-43
Identities = 87/140 (62%), Positives = 103/140 (73%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
ET KDPQASW+ES+ +LEKDPQGR NP+LD SD+EK FR+HVK L ++C F+ LLA
Sbjct: 143 ETTKDPQASWTESKPRLEKDPQGRETNPDLDPSDIEKLFREHVKMLHDQCTNVFKDLLAG 202
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
I AE AAQ++ED KT+L SWSTAK LLK DPRYNKM RKERETLWRR+ +E+LRKQK
Sbjct: 203 VIIAEAAAQKTEDGKTVLDSWSTAKRLLKPDPRYNKMPRKERETLWRRYGEEMLRKQKSS 262
Query: 244 QDQGEKPEDGKTKTGKHSSA 185
DQ E G + SA
Sbjct: 263 PDQKEDRHTGAKNRSSNDSA 282
>ref|XP_006360861.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X4 [Solanum
tuberosum]
Length = 1027
Score = 178 bits (451), Expect = 1e-42
Identities = 89/143 (62%), Positives = 109/143 (76%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
E IKDPQASW+ES+ KLEKDPQGRAANP+LD+SDLEK FR+HVK L ERC Q+F+ LLAE
Sbjct: 890 EIIKDPQASWTESKPKLEKDPQGRAANPHLDQSDLEKLFREHVKVLYERCAQEFKVLLAE 949
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
IT E ++E+E+ KT+ SWSTAK LLK D RY+KMARK+RETLWRR+ ++I R+QK
Sbjct: 950 VITVEACSRETENGKTVANSWSTAKQLLKGDLRYSKMARKDRETLWRRYVEDIHRRQKST 1009
Query: 244 QDQGEKPEDGKTKTGKHSSASRR 176
D+ +K K SS SRR
Sbjct: 1010 LDEADKAR------SKGSSDSRR 1026
>ref|XP_006360860.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X3 [Solanum
tuberosum]
Length = 1036
Score = 178 bits (451), Expect = 1e-42
Identities = 89/143 (62%), Positives = 109/143 (76%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
E IKDPQASW+ES+ KLEKDPQGRAANP+LD+SDLEK FR+HVK L ERC Q+F+ LLAE
Sbjct: 899 EIIKDPQASWTESKPKLEKDPQGRAANPHLDQSDLEKLFREHVKVLYERCAQEFKVLLAE 958
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
IT E ++E+E+ KT+ SWSTAK LLK D RY+KMARK+RETLWRR+ ++I R+QK
Sbjct: 959 VITVEACSRETENGKTVANSWSTAKQLLKGDLRYSKMARKDRETLWRRYVEDIHRRQKST 1018
Query: 244 QDQGEKPEDGKTKTGKHSSASRR 176
D+ +K K SS SRR
Sbjct: 1019 LDEADKAR------SKGSSDSRR 1035
>ref|XP_006360858.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Solanum
tuberosum] gi|565390252|ref|XP_006360859.1| PREDICTED:
pre-mRNA-processing protein 40C-like isoform X2 [Solanum
tuberosum]
Length = 1038
Score = 178 bits (451), Expect = 1e-42
Identities = 89/143 (62%), Positives = 109/143 (76%)
Frame = -3
Query: 604 ETIKDPQASWSESRVKLEKDPQGRAANPNLDKSDLEKFFRDHVKSLQERCVQDFRALLAE 425
E IKDPQASW+ES+ KLEKDPQGRAANP+LD+SDLEK FR+HVK L ERC Q+F+ LLAE
Sbjct: 901 EIIKDPQASWTESKPKLEKDPQGRAANPHLDQSDLEKLFREHVKVLYERCAQEFKVLLAE 960
Query: 424 TITAEGAAQESEDCKTILTSWSTAKLLLKSDPRYNKMARKERETLWRRHADEILRKQKKD 245
IT E ++E+E+ KT+ SWSTAK LLK D RY+KMARK+RETLWRR+ ++I R+QK
Sbjct: 961 VITVEACSRETENGKTVANSWSTAKQLLKGDLRYSKMARKDRETLWRRYVEDIHRRQKST 1020
Query: 244 QDQGEKPEDGKTKTGKHSSASRR 176
D+ +K K SS SRR
Sbjct: 1021 LDEADKAR------SKGSSDSRR 1037