BLASTX nr result
ID: Mentha26_contig00008665
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00008665
(887 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus... 325 2e-86
ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 291 2e-76
ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 288 2e-75
sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c... 283 8e-74
emb|CBI14910.3| unnamed protein product [Vitis vinifera] 278 3e-72
ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 273 6e-71
gb|EPS64023.1| hypothetical protein M569_10758, partial [Genlise... 271 2e-70
ref|XP_007215709.1| hypothetical protein PRUPE_ppa008913mg [Prun... 270 4e-70
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 270 7e-70
sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, c... 265 1e-68
ref|XP_002318093.2| hypothetical protein POPTR_0012s09200g [Popu... 264 4e-68
ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ri... 260 6e-67
gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus... 259 1e-66
emb|CBI34828.3| unnamed protein product [Vitis vinifera] 258 3e-66
dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemu... 256 6e-66
ref|XP_007037796.1| 31-kDa RNA binding protein [Theobroma cacao]... 256 8e-66
ref|XP_007209411.1| hypothetical protein PRUPE_ppa009286mg [Prun... 255 1e-65
ref|XP_004299163.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 254 3e-65
ref|XP_006476920.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 251 3e-64
ref|XP_002321649.2| RNA-binding family protein [Populus trichoca... 249 8e-64
>gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus guttatus]
Length = 301
Score = 325 bits (832), Expect = 2e-86
Identities = 170/272 (62%), Positives = 215/272 (79%), Gaps = 12/272 (4%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPF---KASYSHPSLSVPFRPIKLQISCSYASSIPL 611
M+ AKP LKP SMATNGC TS+PS F +ASYSHP+LS+ F+P+K Q++CSY+SSI L
Sbjct: 1 MSFVAKPALKPASMATNGCFTSVPSLFTTSRASYSHPNLSIRFKPVKFQLNCSYSSSISL 60
Query: 610 ----SLKRKEPILRVSVIAAQQEEDIPVLLEEQQEG--GEFSWAEAPDSDGGSGEADEYV 449
SLK+KE ++RVS+++A QEE PVL+EEQ+EG G F+W A + E D
Sbjct: 61 PTFSSLKKKETLIRVSIVSALQEEGNPVLVEEQEEGFQGNFNWGAASGT-----ENDVVS 115
Query: 448 EPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEA 269
EP EEAK++VGNL YDVD+E+L ++F AG V++ EII +R+T +SRGFGFVTMSTVEEA
Sbjct: 116 EPSEEAKVYVGNLPYDVDSEKLAKLFEDAGVVEIAEIIYNRETDQSRGFGFVTMSTVEEA 175
Query: 268 EKAVEMFHKYDLNGRLLTVNKAAKRGTKPP--PRV-YETRYRIYVGNLPWTVDDARLTQI 98
EKAV+MFH+YD+ GRLLTVNKAA +G++P PRV ET +IYVGNLPWT DD+RL ++
Sbjct: 176 EKAVDMFHRYDIGGRLLTVNKAAPKGSRPERVPRVSSETTPKIYVGNLPWTADDSRLEEL 235
Query: 97 FSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
FSE+GKV SARV++DRETGRSRGFGFVVMS+E
Sbjct: 236 FSEYGKVVSARVVSDRETGRSRGFGFVVMSNE 267
Score = 67.8 bits (164), Expect = 5e-09
Identities = 41/129 (31%), Positives = 56/129 (43%)
Frame = -2
Query: 580 VSVIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVEPPEEAKLFVGNLSYD 401
V++ ++ E + GG G E V K++VGNL +
Sbjct: 167 VTMSTVEEAEKAVDMFHRYDIGGRLLTVNKAAPKGSRPERVPRVSSETTPKIYVGNLPWT 226
Query: 400 VDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRL 221
D RL E+FS G V ++ R+TG SRGFGFV MS E A+ L+GR
Sbjct: 227 ADDSRLEELFSEYGKVVSARVVSDRETGRSRGFGFVVMSNESEVNDAIANLDGQSLDGRP 286
Query: 220 LTVNKAAKR 194
+ VN A R
Sbjct: 287 IRVNVAQDR 295
>ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 302
Score = 291 bits (746), Expect = 2e-76
Identities = 158/270 (58%), Positives = 201/270 (74%), Gaps = 10/270 (3%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQISCSYASSIPLSLK 602
M+ KPL+K SMATN CLT LP F + S +S P +PI L S S +SS LSLK
Sbjct: 1 MSSLTKPLIKNLSMATNSCLT-LPPFFTTTKSMSFISTPLKPISLSSSFSSSSSF-LSLK 58
Query: 601 RKEPILR--VSVIAAQQEEDIPVLLEEQQEGGE---FSWA---EAPDSDGGSGEADEYVE 446
+ VSV+AAQQ++D V LE++++GGE F +A +A +SD EA+EY E
Sbjct: 59 KTTTQFPSIVSVVAAQQDDDSSVGLEDKEQGGESLSFDFASVGDAGESDEAEAEAEEYEE 118
Query: 445 PPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAE 266
PPE+AKLFVGNL YD+D+E L ++F AG V++ E+I +R+T SRGFGFVTMSTVEEAE
Sbjct: 119 PPEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 178
Query: 265 KAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFS 92
KAV ++++YD+NGRLLTVNKAA+RG++P PPR ++ YRIYVGN+PW +DDARL Q+FS
Sbjct: 179 KAVVLYNRYDINGRLLTVNKAARRGSQPERPPRTFQPTYRIYVGNIPWDIDDARLEQVFS 238
Query: 91 EHGKVESARVLTDRETGRSRGFGFVVMSSE 2
EHGKV SARV+ DRE+GRSRGFGFV MSSE
Sbjct: 239 EHGKVISARVVYDRESGRSRGFGFVTMSSE 268
Score = 68.6 bits (166), Expect = 3e-09
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGN+ +D+D RL ++FS G V ++ R++G SRGFGFVTMS+ E +A+
Sbjct: 218 RIYVGNIPWDIDDARLEQVFSEHGKVISARVVYDRESGRSRGFGFVTMSSEAEMSEAIAN 277
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 278 LDGQTLDGRTIRVNAAEER 296
>ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 296
Score = 288 bits (737), Expect = 2e-75
Identities = 153/268 (57%), Positives = 196/268 (73%), Gaps = 8/268 (2%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQISCSYASSIPLSLK 602
M+ KPL+K SMATN CL SLP F + S +S P +PI L +SS+ L
Sbjct: 1 MSSLTKPLIKNLSMATNSCLISLPPFFTTTKSMSFISTPLKPISL------SSSLSLKKT 54
Query: 601 RKEPILRVSVIAAQQEEDIPVLLEEQQEGGE---FSWA---EAPDSDGGSGEADEYVEPP 440
+ VSV+AA Q++D V LE++++GGE F +A +A +SD EA+EY EPP
Sbjct: 55 TTQFPSIVSVVAALQDDDSSVGLEDKEQGGEALSFDFASVGDAGESDEAEAEAEEYQEPP 114
Query: 439 EEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKA 260
E+AKLFVGNL YD+D+E L ++F AG V++ E+I +R+T SRGFGFVTMSTVEEAEKA
Sbjct: 115 EDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 174
Query: 259 VEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFSEH 86
V ++++YDLNGRLLTVNKAA+RG++P PPR ++ YRIYVGN+PW +DDARL Q+FSEH
Sbjct: 175 VVLYNRYDLNGRLLTVNKAARRGSQPERPPRTFQPTYRIYVGNIPWDIDDARLEQVFSEH 234
Query: 85 GKVESARVLTDRETGRSRGFGFVVMSSE 2
GKV SARV+ DRE+GRSRGFGFV MSSE
Sbjct: 235 GKVVSARVVYDRESGRSRGFGFVTMSSE 262
Score = 68.6 bits (166), Expect = 3e-09
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGN+ +D+D RL ++FS G V ++ R++G SRGFGFVTMS+ E +A+
Sbjct: 212 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVYDRESGRSRGFGFVTMSSEPEMSEAIAN 271
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 272 LDGQTLDGRTIRVNAAEER 290
>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product
[Nicotiana sylvestris]
Length = 315
Score = 283 bits (723), Expect = 8e-74
Identities = 159/287 (55%), Positives = 199/287 (69%), Gaps = 27/287 (9%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKA-----SYSHPSLSVPFRPIKL-QISCSYASS 620
M+ A KP++KP SMATN CL SLP F S+++P LS +PIKL +SC+Y+
Sbjct: 1 MSCATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTYSPC 60
Query: 619 IPLSLKRKEPILRVSVIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSD----------GGS 470
I LS K+K SV A Q+EE+ +L + QE G+ E + G +
Sbjct: 61 I-LSPKKK-----TSVSALQEEENTLILDGQGQESGDLFNFEPSGEETEEEGFVEAVGDA 114
Query: 469 GEADE---------YVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTG 317
GE+DE + EPPE+AKLFVGNL YDVD+E L +F AG V++ E+I +RDT
Sbjct: 115 GESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTD 174
Query: 316 ESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYV 143
+SRGFGFVTMSTVEEAEKAVEM+++YD+NGRLLTVNKAA+RG +P PPR +E YRIYV
Sbjct: 175 QSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYV 234
Query: 142 GNLPWTVDDARLTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
GN+PW +DDARL Q+FSEHGKV SARV+ DRETGRSRGFGFV M+SE
Sbjct: 235 GNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASE 281
Score = 64.7 bits (156), Expect = 5e-08
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGN+ + +D RL ++FS G V ++ R+TG SRGFGFVTM++ E A+
Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290
Query: 250 FHKYDLNGRLLTVNKAAKRGTK 185
L+GR + VN A R +
Sbjct: 291 LDGQSLDGRTIRVNVAEDRSRR 312
>emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 278 bits (710), Expect = 3e-72
Identities = 159/275 (57%), Positives = 193/275 (70%), Gaps = 15/275 (5%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVP-FRPIKLQISCSYASSIPLSL 605
M+ A LLKPFS+ NG SLP+ F H L +P +PIKL +SCS +S SL
Sbjct: 1 MSSATHHLLKPFSIP-NGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSL 59
Query: 604 KRKEPILRVSVIA--------AQQEEDIPVLLEEQQEGGEFSWA--EAPDSDG--GSGEA 461
K L SV+ AQQEED V++EE+QE + +W EA DG GE
Sbjct: 60 FLKSKTLSSSVVTFVAQTSDWAQQEEDNTVIIEEEQEE-KVTWENEEAISDDGVVDDGE- 117
Query: 460 DEYVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMST 281
D Y EPPEEAK+FVGNL YDVD+ERL +F AG V++ E+I +R+T SRGFGFV+MST
Sbjct: 118 DSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMST 177
Query: 280 VEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARL 107
VEEAEKAV+MFH+Y+L+GRLLTVNKAA RG++P PPRV+E +R+YVGNLPW VD ARL
Sbjct: 178 VEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARL 237
Query: 106 TQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
Q+FSEHGKV ARV+ DRETGRSRGFGFV MSS+
Sbjct: 238 EQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQ 272
Score = 72.0 bits (175), Expect = 3e-10
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL +DVD+ RL ++FS G V ++ R+TG SRGFGFVTMS+ E E A+
Sbjct: 222 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 281
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 282 TDGQTLDGRTIRVNVAEER 300
>ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 273 bits (698), Expect = 6e-71
Identities = 157/295 (53%), Positives = 193/295 (65%), Gaps = 35/295 (11%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVP-FRPIKLQISCSYASSIPLSL 605
M+ A LLKPFS+ NG SLP+ F H L +P +PIKL +SCS +S SL
Sbjct: 1 MSSATHHLLKPFSIP-NGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSL 59
Query: 604 KRKEPILRVSVIA--------AQQEEDIPVLLEEQQEGGEFSW----AEAPDSDGGSGEA 461
K L SV+ AQQEED V++EE+QE + +W E PD+ E+
Sbjct: 60 FLKSKTLSSSVVTFVAQTSDWAQQEEDNTVIIEEEQEE-KVTWENEEVEGPDAQASDWES 118
Query: 460 --------------------DEYVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVE 341
D Y EPPEEAK+FVGNL YDVD+ERL +F AG V++ E
Sbjct: 119 EGEGAVTEAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAE 178
Query: 340 IICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVY 167
+I +R+T SRGFGFV+MSTVEEAEKAV+MFH+Y+L+GRLLTVNKAA RG++P PPRV+
Sbjct: 179 VIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVF 238
Query: 166 ETRYRIYVGNLPWTVDDARLTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
E +R+YVGNLPW VD ARL Q+FSEHGKV ARV+ DRETGRSRGFGFV MSS+
Sbjct: 239 EPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQ 293
Score = 72.0 bits (175), Expect = 3e-10
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL +DVD+ RL ++FS G V ++ R+TG SRGFGFVTMS+ E E A+
Sbjct: 243 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 302
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 303 TDGQTLDGRTIRVNVAEER 321
>gb|EPS64023.1| hypothetical protein M569_10758, partial [Genlisea aurea]
Length = 292
Score = 271 bits (693), Expect = 2e-70
Identities = 146/267 (54%), Positives = 192/267 (71%), Gaps = 11/267 (4%)
Frame = -2
Query: 769 AKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRP-IKLQISCSYASSIPLSLKRK- 596
AK +KP SM T GC S P+ S +S+P P IK +SCS ASS+ L+++
Sbjct: 1 AKSAMKPLSMPTAGCFISFPT------SIAFVSIPSNPTIKCNLSCSAASSLLPILRKQN 54
Query: 595 -EPILRVSVIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEA----DEYVEPPEEA 431
EPIL + +AAQ+++ PVLLE+Q+ G F+W + + GGS + +YVEPPEEA
Sbjct: 55 QEPILGPTAVAAQRKDGNPVLLEDQEFEGNFNWVGSESAAGGSEDVVDDEGDYVEPPEEA 114
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
KL+VGNL +DVD+ERL +IF AG V++ E+I +RD+ +SRGFGFVTMS+VEEAE+AVEM
Sbjct: 115 KLYVGNLPFDVDSERLAKIFEEAGVVEIAEVIYNRDSDQSRGFGFVTMSSVEEAERAVEM 174
Query: 250 FHKYDLNGRLLTVNKAAKRGTK----PPPRVYETRYRIYVGNLPWTVDDARLTQIFSEHG 83
F++YDL GR LTVNKA+ RG+K PP RV + +IYVGNL W+V D +L Q+FSEHG
Sbjct: 175 FNRYDLGGRFLTVNKASPRGSKPDRRPPSRVSDRSNKIYVGNLAWSVTDEKLEQVFSEHG 234
Query: 82 KVESARVLTDRETGRSRGFGFVVMSSE 2
KV SA+V++DRETGRSRGFGFV M +E
Sbjct: 235 KVVSAQVVSDRETGRSRGFGFVAMETE 261
Score = 70.1 bits (170), Expect = 1e-09
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Frame = -2
Query: 580 VSVIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVEPPEEA-----KLFVG 416
V++ + ++ E + GG F G + PP K++VG
Sbjct: 160 VTMSSVEEAERAVEMFNRYDLGGRFLTVNKASPRGSKPDR----RPPSRVSDRSNKIYVG 215
Query: 415 NLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYD 236
NL++ V E+L ++FS G V +++ R+TG SRGFGFV M T E +A+ +
Sbjct: 216 NLAWSVTDEKLEQVFSEHGKVVSAQVVSDRETGRSRGFGFVAMETESERNEAIASLDGQN 275
Query: 235 LNGRLLTVNKAAKR 194
L+GR L VN A R
Sbjct: 276 LDGRALRVNVAEDR 289
>ref|XP_007215709.1| hypothetical protein PRUPE_ppa008913mg [Prunus persica]
gi|462411859|gb|EMJ16908.1| hypothetical protein
PRUPE_ppa008913mg [Prunus persica]
Length = 314
Score = 270 bits (691), Expect = 4e-70
Identities = 152/279 (54%), Positives = 193/279 (69%), Gaps = 19/279 (6%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQ-ISCSYASSIP--L 611
M+ A LKP S+A + CL S+P+ F +P LS+P +P KL +SCS+ S+P +
Sbjct: 1 MSSATAAFLKPISIAES-CLPSVPALFAPKNQYPILSLPSKPTKLSAVSCSFTPSLPSWV 59
Query: 610 SLKRKEPILRVSVIAA-QQEEDIPVL--------LEEQQEGGEFSWAEAPDSDGGSG--- 467
SLK K L V+ + QEE++ +EE ++G E S + G G
Sbjct: 60 SLKHKSLPLHVAQTSDWAQEEEVKEEGSGFESEGVEETEDGVEASALSDGEESSGDGVLA 119
Query: 466 --EADEYVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFV 293
E + Y EPPEEAKL+VGNL YDVD+E+L IF+ AG V++ E+I +R+T +SRGFGFV
Sbjct: 120 VGEEEYYPEPPEEAKLYVGNLPYDVDSEKLAHIFNEAGVVEIAEVIYNRETDQSRGFGFV 179
Query: 292 TMSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVD 119
TMSTVEEAEKAV++FH+YD+ GRLLTVNKAA RG++P PPRV E +RIYVGNLPW VD
Sbjct: 180 TMSTVEEAEKAVQLFHRYDIGGRLLTVNKAAPRGSRPERPPRVNEPSFRIYVGNLPWQVD 239
Query: 118 DARLTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
D+RL Q+FSEHGKV SARV+ DRETGRSRGFGFV SSE
Sbjct: 240 DSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTFSSE 278
Score = 70.1 bits (170), Expect = 1e-09
Identities = 42/129 (32%), Positives = 61/129 (47%)
Frame = -2
Query: 580 VSVIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVEPPEEAKLFVGNLSYD 401
V++ ++ E L GG G E V P +++VGNL +
Sbjct: 179 VTMSTVEEAEKAVQLFHRYDIGGRLLTVNKAAPRGSRPERPPRVNEPS-FRIYVGNLPWQ 237
Query: 400 VDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRL 221
VD RL ++FS G V ++ R+TG SRGFGFVT S+ E + A+ L+GR
Sbjct: 238 VDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTFSSETEVDDAIAALDGQSLDGRS 297
Query: 220 LTVNKAAKR 194
+ VN A +R
Sbjct: 298 IRVNVAEER 306
>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 270 bits (689), Expect = 7e-70
Identities = 153/278 (55%), Positives = 192/278 (69%), Gaps = 21/278 (7%)
Frame = -2
Query: 772 AAKPLLKPFSMATNGCLTSLPSP-FKASYSHPSLSVPFRPIKL-QISCSYASSIPLSLKR 599
++ LLKPFSMA + CLTS+P+ F HP LS+P +P++L +SCS +SS +SLK
Sbjct: 3 SSNALLKPFSMAES-CLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSW-VSLKT 60
Query: 598 KEP-------ILRVSVIAAQQEEDIPVLLEEQQEGGEF--------SWAEAPDSDG--GS 470
K + + S A Q+EE+ L EGGE +W DG
Sbjct: 61 KTSPTTLVPFVAQTSDWAQQEEEEEKGGLTWDSEGGEEIEASGSEEAWEGEVGEDGEESE 120
Query: 469 GEADEYVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVT 290
G D Y EPPEEAKLFVGNL YD+D+E+L ++F AG V++ E+I +R+T +SRGFGF+T
Sbjct: 121 GSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFIT 180
Query: 289 MSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDD 116
MSTVEEAEKAVEMF++YDLNGR LTVNKAA RG++P PP+ +E +RIYVGNLPW VDD
Sbjct: 181 MSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDD 240
Query: 115 ARLTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
ARL Q+FSEHGKV ARV+ DR+T RSRGFGFV MSSE
Sbjct: 241 ARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSE 278
Score = 66.2 bits (160), Expect = 2e-08
Identities = 34/79 (43%), Positives = 47/79 (59%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL + VD RL ++FS G V ++ RDT SRGFGFVTMS+ E A+
Sbjct: 228 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 287
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 288 LDGQSLDGRAIRVNVAEER 306
>sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor gi|100388|pir||S12109
ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product
[Nicotiana sylvestris]
Length = 276
Score = 265 bits (678), Expect = 1e-68
Identities = 141/253 (55%), Positives = 182/253 (71%), Gaps = 6/253 (2%)
Frame = -2
Query: 742 MATNGCLTSLPSPF---KASYSHPSLSVPFRPIKLQISCSYASSIPLSLK-RKEPILRVS 575
MATNGCL SLP F K+ S+P LS +PI L +SS+P L K +
Sbjct: 1 MATNGCLISLPPFFTTTKSISSYPFLSTQLKPISL------SSSLPTLLSLNKRTTQFPT 54
Query: 574 VIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVEPPEEAKLFVGNLSYDVD 395
++ E+D ++L++Q++GG+F P G +GE +EY EP E+AKLFVGNL YD+D
Sbjct: 55 FVSVLSEDDNTLVLDDQEQGGDF-----PSFVGEAGETEEYQEPSEDAKLFVGNLPYDID 109
Query: 394 TERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLT 215
+E L ++F AG V++ E+I +R+T SRGFGFVTMSTVEEA+KAVE++ +YDLNGRLLT
Sbjct: 110 SEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLT 169
Query: 214 VNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFSEHGKVESARVLTDRETG 41
VNKAA RG++P PR ++ YRIYVGN+PW +DDARL Q+FSEHGKV SARV+ DRE+G
Sbjct: 170 VNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESG 229
Query: 40 RSRGFGFVVMSSE 2
RSRGFGFV MSSE
Sbjct: 230 RSRGFGFVTMSSE 242
Score = 68.6 bits (166), Expect = 3e-09
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGN+ +D+D RL ++FS G V ++ R++G SRGFGFVTMS+ E +A+
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 252 LDGQTLDGRTIRVNAAEER 270
>ref|XP_002318093.2| hypothetical protein POPTR_0012s09200g [Populus trichocarpa]
gi|550326725|gb|EEE96313.2| hypothetical protein
POPTR_0012s09200g [Populus trichocarpa]
Length = 382
Score = 264 bits (674), Expect = 4e-68
Identities = 157/297 (52%), Positives = 190/297 (63%), Gaps = 36/297 (12%)
Frame = -2
Query: 784 EMAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQISCSYASSIPLSL 605
+M+ A+ KP MA CL SLPS F + SL + RP KLQ+S S++ S P SL
Sbjct: 55 KMSAASAFTFKPLLMAET-CLCSLPSTFASKPPLKSLPISQRPSKLQLSYSHSLS-PFSL 112
Query: 604 KRKEP-------ILRVSVIAAQQEED---IPVLLEEQQEGGEFSWA-------------- 497
K K + + S A Q EED I + EQ+E GE +W
Sbjct: 113 KPKTHLSLTIPFVTQTSDWAQQGEEDNTTITLTESEQEEQGESNWVNEESNDFEGKVSEW 172
Query: 496 ----------EAPDSDGGSGEADEYVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDM 347
EA +G SG+ + +VEPPEEAK+FVGNL YDVD+E+L +F AGTV++
Sbjct: 173 EAEGEDAAATEAIRGEGESGDEEGFVEPPEEAKIFVGNLPYDVDSEKLAMLFEQAGTVEI 232
Query: 346 VEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPR 173
E+I +R+T SRGFGFVTMSTVEE+EKAVEM H+YDL+GR LTVNKAA RG++P PPR
Sbjct: 233 AEVIYNRETDTSRGFGFVTMSTVEESEKAVEMLHRYDLDGRFLTVNKAAPRGSRPERPPR 292
Query: 172 VYETRYRIYVGNLPWTVDDARLTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
V E YRIYVGNLPW VD RL QIFSEHGKV SARV+ DRET RSRGFGFV MS+E
Sbjct: 293 VSEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTE 349
Score = 73.2 bits (178), Expect = 1e-10
Identities = 45/129 (34%), Positives = 64/129 (49%)
Frame = -2
Query: 580 VSVIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVEPPEEAKLFVGNLSYD 401
V++ ++ E +L G F G E V P +++VGNL +D
Sbjct: 250 VTMSTVEESEKAVEMLHRYDLDGRFLTVNKAAPRGSRPERPPRVSEPGY-RIYVGNLPWD 308
Query: 400 VDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRL 221
VD+ RL +IFS G V ++ R+T SRGFGFVTMST E A+ +L+GR
Sbjct: 309 VDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALDGQNLDGRP 368
Query: 220 LTVNKAAKR 194
+ VN A +R
Sbjct: 369 IRVNVAEER 377
>ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 319
Score = 260 bits (664), Expect = 6e-67
Identities = 156/288 (54%), Positives = 192/288 (66%), Gaps = 37/288 (12%)
Frame = -2
Query: 754 KPFSMATNGCLTSLPSPFKASYSHPSLSVPFRP-IKLQISCSYASSIPLSLKRKEP---- 590
KP SMA + CL SLPS F + + SLSVP RP IKL I+ SY+S LK K
Sbjct: 5 KPLSMA-DSCLLSLPSIFTSKPPYLSLSVPSRPPIKLHITQSYSS-----LKSKTHFSSL 58
Query: 589 ---ILRVSVIAAQQEEDIPVLLEEQQEGGEFSWAEAP----------DSDG------GSG 467
+ + S A Q+E D V L E ++ E+ E+ DS+G G G
Sbjct: 59 VPLVAQTSDWAQQEENDATVTLAESEQEQEWEGQESETETEARVSDWDSEGESAAVDGQG 118
Query: 466 EADEYV-----------EPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDT 320
E +E V EPPE+AK+FVGNL YDVD+++L +F AGTV++ E+I +R+T
Sbjct: 119 EEEEEVFEGSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRET 178
Query: 319 GESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIY 146
SRGFGFV+MSTVEEAEKAVEMFH++DL+GRLLTVNKAA RG++P PPRV+E YRIY
Sbjct: 179 DTSRGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIY 238
Query: 145 VGNLPWTVDDARLTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
VGNLPW VD+ARL QIFSEHGKV ARV+ DR+TGRSRGFGFV MS+E
Sbjct: 239 VGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTE 286
Score = 73.6 bits (179), Expect = 1e-10
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL +DVD RL +IFS G V ++ RDTG SRGFGFVTMST E A+
Sbjct: 236 RIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAA 295
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 296 LDGRSLDGRAIRVNVAEQR 314
>gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus guttatus]
Length = 294
Score = 259 bits (662), Expect = 1e-66
Identities = 146/270 (54%), Positives = 188/270 (69%), Gaps = 11/270 (4%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQI--SCSYASSIPL- 611
M+ +AK +L P SMATN CL S PS F S V ++PIK Q SC SS+ L
Sbjct: 1 MSFSAKAVLNPASMATNACLISSPSLFTGS------KVSYKPIKFQAASSCKNISSLSLH 54
Query: 610 ---SLKRKEPILRVSVIAAQQEEDIPVLLEEQQEG---GEFSWAEAPDSDGGSGEADEYV 449
SL RK LR+SV++AQ+E + PV+LEE++E G F W + G + Y
Sbjct: 55 SFFSLTRK---LRLSVVSAQEEGNNPVILEEKEEEEVEGGFKWGA---NVVGEAAGEGYA 108
Query: 448 EPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEA 269
+PPE AK++VGNL YDVD+E+L ++F AG V++ E+I RDT +SRGFGFVTMST EEA
Sbjct: 109 QPPEGAKVYVGNLPYDVDSEKLAQLFEPAGVVEIAEVIYSRDTEQSRGFGFVTMSTEEEA 168
Query: 268 EKAVEMFHKYDLNGRLLTVNKAAKRGTK--PPPRVYETRYRIYVGNLPWTVDDARLTQIF 95
EKAVEMF ++D+ GRLLTVN AA +G++ PP +E ++IYVGNL W VDD+ L ++F
Sbjct: 169 EKAVEMFSRFDMGGRLLTVNIAAPKGSRIERPPPSFEPTHKIYVGNLSWNVDDSSLEELF 228
Query: 94 SEHGKVESARVLTDRETGRSRGFGFVVMSS 5
S+HGKV SARV++DRETGRSRGFGFVVMSS
Sbjct: 229 SQHGKVVSARVISDRETGRSRGFGFVVMSS 258
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
K++VGNLS++VD L E+FS G V +I R+TG SRGFGFV MS+ E A+
Sbjct: 209 KIYVGNLSWNVDDSSLEELFSQHGKVVSARVISDRETGRSRGFGFVVMSSASEMNDAIAN 268
Query: 250 FHKYDLNGRLLTVNKAAK 197
L+GR + VN A++
Sbjct: 269 LDGESLDGRAIKVNAASE 286
Score = 67.4 bits (163), Expect = 7e-09
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = -2
Query: 277 EEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKPPPRVYETRYRIYVGNLPWTVDDARLTQI 98
E+ E+ VE K+ N V +AA G PP ++YVGNLP+ VD +L Q+
Sbjct: 82 EKEEEEVEGGFKWGAN----VVGEAAGEGYAQPPE----GAKVYVGNLPYDVDSEKLAQL 133
Query: 97 FSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
F G VE A V+ R+T +SRGFGFV MS+E
Sbjct: 134 FEPAGVVEIAEVIYSRDTEQSRGFGFVTMSTE 165
>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 258 bits (658), Expect = 3e-66
Identities = 144/252 (57%), Positives = 179/252 (71%), Gaps = 10/252 (3%)
Frame = -2
Query: 727 CLTSLPSP-FKASYSHPSLSVPFRPIKL-QISCSYASSIPLSLKRK-EPILRVSVIA--- 566
CLTS+P+ F HP LS+P +P++L +SCS +SS +SLK K P V +A
Sbjct: 5 CLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSW-VSLKTKTSPTTLVPFVAQTS 63
Query: 565 --AQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVEPPEEAKLFVGNLSYDVDT 392
AQQEE EE+++G E G D Y EPPEEAKLFVGNL YD+D+
Sbjct: 64 DWAQQEE------EEEKDGEE-----------SEGSEDTYSEPPEEAKLFVGNLPYDIDS 106
Query: 391 ERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLTV 212
E+L ++F AG V++ E+I +R+T +SRGFGF+TMSTVEEAEKAVEMF++YDLNGR LTV
Sbjct: 107 EKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTV 166
Query: 211 NKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFSEHGKVESARVLTDRETGR 38
NKAA RG++P PP+ +E +RIYVGNLPW VDDARL Q+FSEHGKV ARV+ DR+T R
Sbjct: 167 NKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQR 226
Query: 37 SRGFGFVVMSSE 2
SRGFGFV MSSE
Sbjct: 227 SRGFGFVTMSSE 238
Score = 66.2 bits (160), Expect = 2e-08
Identities = 34/79 (43%), Positives = 47/79 (59%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL + VD RL ++FS G V ++ RDT SRGFGFVTMS+ E A+
Sbjct: 188 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 247
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 248 LDGQSLDGRAIRVNVAEER 266
>dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 256 bits (655), Expect = 6e-66
Identities = 144/270 (53%), Positives = 183/270 (67%), Gaps = 14/270 (5%)
Frame = -2
Query: 769 AKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQISCSYASSIPLSLKRKEP 590
A P LK S++ N TSL +P + + S+P +P KL +S S S P S ++
Sbjct: 6 ANPCLKTLSLSHNCFTTSLYTPSIFNPKSHNFSIPLKPTKLNLSISVFS--PFSPQKSST 63
Query: 589 ILR-VSVIAAQQEEDIPVLLEEQQEGGEFSWAEAPDSDG-----GSGEADE------YVE 446
I+ V+ + +E LL+++Q+ G +W D G G DE + E
Sbjct: 64 IVSYVAQTSDWDQESSNALLDDEQQVGGATWGTQNFGDSEPQVSGVGNEDEEESEQGFSE 123
Query: 445 PPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAE 266
PPEEAKLFVGNL YDVD+ERL +IF GAG V++ E+I +R+T SRGFGFVTMSTVEEAE
Sbjct: 124 PPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 183
Query: 265 KAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFS 92
KAVEM + +D+NGRLLTVNKAA RG++P PPR +E R+YVGNLPW VD+ARL Q+FS
Sbjct: 184 KAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPREFEPSCRVYVGNLPWDVDNARLEQVFS 243
Query: 91 EHGKVESARVLTDRETGRSRGFGFVVMSSE 2
EHGKV SARV++DRETGRSRGFGFV M+SE
Sbjct: 244 EHGKVLSARVVSDRETGRSRGFGFVSMASE 273
Score = 69.7 bits (169), Expect = 1e-09
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = -2
Query: 445 PPEE----AKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTV 278
PP E +++VGNL +DVD RL ++FS G V ++ R+TG SRGFGFV+M++
Sbjct: 214 PPREFEPSCRVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASE 273
Query: 277 EEAEKAVEMFHKYDLNGRLLTVNKAAKR 194
E A+ L+GR + VN A +R
Sbjct: 274 SEMNDAIAALDGQTLDGRAIRVNVAEER 301
>ref|XP_007037796.1| 31-kDa RNA binding protein [Theobroma cacao]
gi|508775041|gb|EOY22297.1| 31-kDa RNA binding protein
[Theobroma cacao]
Length = 329
Score = 256 bits (654), Expect = 8e-66
Identities = 156/292 (53%), Positives = 195/292 (66%), Gaps = 41/292 (14%)
Frame = -2
Query: 754 KPFSMATNGCLTSLPSPFKASYSHPSL-SVPFRPIKLQISCSYASSIP-LSLKRKEPILR 581
KP S+A + CL SL S F S PSL S+P + IKL +S S + S+ L K P L
Sbjct: 6 KPISLADSSCLASLASLFSTSSKAPSLLSLPPKSIKLFLSSSRSPSLSALRTKTHFPSL- 64
Query: 580 VSVIA-----AQQEED----IPVLLEEQQ-------EGGEFSW-------AEAPDSD--- 479
V+++A AQQEE+ I + +EQQ E GE +W AEA SD
Sbjct: 65 VALVAQTSDWAQQEEENDTTITIDGQEQQVQEETESEEGESTWENEESDGAEANLSDWDP 124
Query: 478 -----------GGSGEADEYVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIIC 332
GG E ++ ++PPEEAKLFVGNL YDVD++ L +F AGTV++ E+I
Sbjct: 125 EESEDAVFEGQGGDSEEEDSIQPPEEAKLFVGNLPYDVDSQSLAMLFEKAGTVEIAEVIY 184
Query: 331 HRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTK--PPPRVYETR 158
+R+T +SRGFGFVTMS+VEEAEKA E+F++YDLNGRLLTVNKA+ RG++ PPRVYE
Sbjct: 185 NRETEQSRGFGFVTMSSVEEAEKAAELFNRYDLNGRLLTVNKASPRGSRFDRPPRVYEPA 244
Query: 157 YRIYVGNLPWTVDDARLTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
+RIYVGN+PW VD+ARL Q+FSEHGKV ARV+ DRETGRSRGFGFV MSSE
Sbjct: 245 FRIYVGNIPWDVDNARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSE 296
Score = 68.6 bits (166), Expect = 3e-09
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGN+ +DVD RL ++FS G V ++ R+TG SRGFGFVTMS+ E A+
Sbjct: 246 RIYVGNIPWDVDNARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSETELNDAIAA 305
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L GR + VN A +R
Sbjct: 306 LDGQILEGRAIRVNVAEER 324
>ref|XP_007209411.1| hypothetical protein PRUPE_ppa009286mg [Prunus persica]
gi|462405146|gb|EMJ10610.1| hypothetical protein
PRUPE_ppa009286mg [Prunus persica]
Length = 298
Score = 255 bits (652), Expect = 1e-65
Identities = 147/270 (54%), Positives = 185/270 (68%), Gaps = 10/270 (3%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQISCSYAS--SIPLS 608
MA A L K S+A + CL SLP ++ LS+P +PIKL ++ ++AS S PLS
Sbjct: 1 MASATSNLFKTLSIA-DSCLVSLPYLSSTKTANSFLSIPSKPIKLHLTYTHASHFSPPLS 59
Query: 607 LKRKEPILR-VSVIA-----AQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVE 446
LK K VS +A AQQEED + ++ Q EG E + E + VE
Sbjct: 60 LKNKTQFSSIVSFVAQTSDWAQQEEDSTLTID-QDEGAE----SGEEGVFAEREEEANVE 114
Query: 445 PPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAE 266
PPEEAK+FVGNL YDVD+++L E+F AG V++ E+I +RDT +SRGFGFVTMSTVEEA+
Sbjct: 115 PPEEAKVFVGNLPYDVDSQKLAELFERAGVVEIAEVIYNRDTEQSRGFGFVTMSTVEEAD 174
Query: 265 KAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFS 92
KAVE+F +YDLNGRLLTVN+AA RGT+ PR +E +RIYVGNLPW VD+ +L Q+FS
Sbjct: 175 KAVELFSRYDLNGRLLTVNRAAPRGTRQERTPRSFEPSFRIYVGNLPWNVDNGQLEQVFS 234
Query: 91 EHGKVESARVLTDRETGRSRGFGFVVMSSE 2
EHG V ARV+ DRETGRSRGFGFV M+SE
Sbjct: 235 EHGSVVEARVVFDRETGRSRGFGFVTMASE 264
Score = 68.9 bits (167), Expect = 2e-09
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL ++VD +L ++FS G+V ++ R+TG SRGFGFVTM++ E A+
Sbjct: 214 RIYVGNLPWNVDNGQLEQVFSEHGSVVEARVVFDRETGRSRGFGFVTMASENEMNDAIAA 273
Query: 250 FHKYDLNGRLLTVNKAAKRGTKPP 179
L+GR + VN A +R + P
Sbjct: 274 LDGQSLDGRAIRVNVAEERQRRSP 297
>ref|XP_004299163.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 292
Score = 254 bits (649), Expect = 3e-65
Identities = 145/270 (53%), Positives = 180/270 (66%), Gaps = 10/270 (3%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPI---KLQISCSYASSIPL 611
M A L K S+ + C SLP F + + LS+P RP KL +S S+A PL
Sbjct: 1 MTSATSHLFKTLSITADSCALSLPHLFSSKTPNAFLSIPTRPTTTAKLHLSHSFA---PL 57
Query: 610 SLKRKEPILRVSVIA-----AQQEEDIPVLLEEQQEGGEFSWAEAPDSDGGSGEADEYVE 446
K L VS +A AQQEED PV ++ +E GE E + + VE
Sbjct: 58 RSKTHFSSL-VSYVAQTSDWAQQEEDSPVAIDGAEESGEEGVFEEREEEVAP------VE 110
Query: 445 PPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAE 266
PPEEAK+FVGNL +DVD+ERL ++F AG V++ E+I +RDT +SRGFGFVTMSTVEEA+
Sbjct: 111 PPEEAKIFVGNLPFDVDSERLAQLFEKAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAD 170
Query: 265 KAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFS 92
+AVE F +YDLNGRLLTVNKAA RGT+ PPR +E+ YRIYVGNLPW VD+ L Q+FS
Sbjct: 171 RAVEQFSRYDLNGRLLTVNKAAPRGTRAERPPRSFESSYRIYVGNLPWNVDNGELEQLFS 230
Query: 91 EHGKVESARVLTDRETGRSRGFGFVVMSSE 2
+HG+V ARV+ DRETGRSRGFGFV M+SE
Sbjct: 231 KHGRVVDARVVFDRETGRSRGFGFVTMASE 260
Score = 63.2 bits (152), Expect = 1e-07
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL ++VD L ++FS G V ++ R+TG SRGFGFVTM++ + A+
Sbjct: 210 RIYVGNLPWNVDNGELEQLFSKHGRVVDARVVFDRETGRSRGFGFVTMASESDMNDAIGA 269
Query: 250 FHKYDLNGRLLTVNKAAKR 194
L+GR + VN A +R
Sbjct: 270 LDGESLDGRAIRVNVAEER 288
>ref|XP_006476920.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 339
Score = 251 bits (641), Expect = 3e-64
Identities = 158/306 (51%), Positives = 189/306 (61%), Gaps = 46/306 (15%)
Frame = -2
Query: 781 MAIAAKPLLKPFS-MATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQISCSYASSIPLSL 605
M+ + +LKP S MA + L S PS F A + S+ RPIKL +S S SS S
Sbjct: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHLSDSSLSSKGFSF 59
Query: 604 KRKEPILRVSVIA--------AQQEEDIP----VLLEEQQEGGE---------------- 509
K K+ I S A QEED L +EQ+E GE
Sbjct: 60 KLKKTIHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGN 119
Query: 508 -FSWAEAPDSDG--------------GSGEADEYVEPPEEAKLFVGNLSYDVDTERLVEI 374
W E D G E +E+VEPPE+AKLFVGNL YDVD+E+L +
Sbjct: 120 LSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAML 179
Query: 373 FSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEMFHKYDLNGRLLTVNKAAKR 194
F AGTV++ E+I +R+T SRGFGFVTMSTVEEAEKAVEMFH+YD++GRLLTVNKAA R
Sbjct: 180 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 239
Query: 193 GTKP--PPRVYETRYRIYVGNLPWTVDDARLTQIFSEHGKVESARVLTDRETGRSRGFGF 20
GT+P PRV+E +RIYVGNLPW VD+ARL Q+FSEHGKV +ARV+ DRETGRSRGFGF
Sbjct: 240 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 299
Query: 19 VVMSSE 2
V MSSE
Sbjct: 300 VTMSSE 305
Score = 68.9 bits (167), Expect = 2e-09
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL ++VD RL ++FS G V ++ R+TG SRGFGFVTMS+ E A+
Sbjct: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
Query: 250 FHKYDLNGRLLTVNKAAKR 194
+L+GR + VN A R
Sbjct: 315 LDGQNLDGRAIRVNVAEDR 333
>ref|XP_002321649.2| RNA-binding family protein [Populus trichocarpa]
gi|550322398|gb|EEF05776.2| RNA-binding family protein
[Populus trichocarpa]
Length = 308
Score = 249 bits (637), Expect = 8e-64
Identities = 144/276 (52%), Positives = 186/276 (67%), Gaps = 16/276 (5%)
Frame = -2
Query: 781 MAIAAKPLLKPFSMATNGCLTSLPSPFKASYSHPSLSVPFRPIKLQISCSYASSIPLSLK 602
M+ A LKP MA C+ S PS F + L + RPIKLQ+S S++ S LS+K
Sbjct: 1 MSATAASTLKPLLMAET-CICSFPSIFTSKPPLKPLPISHRPIKLQLSYSHSLST-LSVK 58
Query: 601 RKEPI-LRVSVIA-----AQQEEDIPVLL--------EEQQEGGEFSWAEAPDSDGGSGE 464
K + L + +A AQQEE+ + E + E S EA +G G+
Sbjct: 59 PKTHLSLTIPFVAQTSDWAQQEEENNTTITLTEVSDWEAEGEDAAASETEAVRGEGERGD 118
Query: 463 ADEYVEPPEEAKLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMS 284
+ +VEPPEEAK++VGNL YDV +E+L +F AGTV++ E+I + +T SRGFGFVTMS
Sbjct: 119 EEGFVEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYNTETDTSRGFGFVTMS 178
Query: 283 TVEEAEKAVEMFHKYDLNGRLLTVNKAAKRGTKP--PPRVYETRYRIYVGNLPWTVDDAR 110
TVEE++KA+EMF++Y+L+GRLLTVNKAA RG++P PPRV E YRIYVGNLPW VD R
Sbjct: 179 TVEESDKAIEMFNRYNLDGRLLTVNKAAPRGSRPERPPRVSEPSYRIYVGNLPWGVDSGR 238
Query: 109 LTQIFSEHGKVESARVLTDRETGRSRGFGFVVMSSE 2
L ++FSEHGKV SA+V++D ETGRSRGFGFV MSSE
Sbjct: 239 LEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSE 274
Score = 70.9 bits (172), Expect = 6e-10
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = -2
Query: 430 KLFVGNLSYDVDTERLVEIFSGAGTVDMVEIICHRDTGESRGFGFVTMSTVEEAEKAVEM 251
+++VGNL + VD+ RL E+FS G V +++ +TG SRGFGFVTMS+ E A+
Sbjct: 224 RIYVGNLPWGVDSGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELNDAIAA 283
Query: 250 FHKYDLNGRLLTVNKAAKR 194
+L+GR + VN AA+R
Sbjct: 284 LDGQELDGRAIRVNVAAER 302