BLASTX nr result

ID: Mentha26_contig00007940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00007940
         (447 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus...    72   6e-11
ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    67   2e-09
ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    67   2e-09
ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    65   1e-08
dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]                64   2e-08
ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    62   1e-07

>gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus guttatus]
          Length = 383

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = +2

Query: 2   SRKGYRNNG---EEGSSR---AGRFYRRLELPGAKSDRWVFFTRGLSFRSPRVVAENXXX 163
           SR+GYR  G   +EGSS     GR Y R++  GAKSDRW FFTR LS +SP+VVAE    
Sbjct: 289 SRRGYRTGGGGYDEGSSSRPAGGRSYWRID-GGAKSDRWAFFTRALSMKSPKVVAEGGDG 347

Query: 164 XXXXXXXXXXPVKMPSFKCLDPK 232
                      VKMPSFKCL+PK
Sbjct: 348 GSTTPV-----VKMPSFKCLEPK 365


>ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 433

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 47/104 (45%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
 Frame = +2

Query: 2   SRKGYRNNGEEGSSRAGRFYRRLEL--PGAKSDRWVF------FTRGLSFRSPRVVAENX 157
           SRKGYR    +GS+R  R  +R+E   P  KSDRW+F      F+RG S +SPRV AE  
Sbjct: 335 SRKGYRTGTGDGSNRGSRSNKRMEWSEPEPKSDRWIFTMAPPFFSRGSSMKSPRVGAE-- 392

Query: 158 XXXXXXXXXXXXPVKMPSFKCLDPKTDGGDENRPFSGQS--PPV 283
                        VK+PSFKCL+PK   GDE    S  S  PPV
Sbjct: 393 AGEGSTSGSLRTAVKLPSFKCLEPK---GDEASLMSTDSARPPV 433


>ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 432

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 47/104 (45%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
 Frame = +2

Query: 2   SRKGYRNNGEEGSSRAGRFYRRLEL--PGAKSDRWVF------FTRGLSFRSPRVVAENX 157
           SRKGYR    +GS+R  R  +R+E   P  KSDRW+F      F+RG S +SPRV AE  
Sbjct: 334 SRKGYRTGTGDGSNRGSRSNKRMEWSEPEPKSDRWIFTMTPPFFSRGSSMKSPRVGAE-- 391

Query: 158 XXXXXXXXXXXXPVKMPSFKCLDPKTDGGDENRPFSGQS--PPV 283
                        VK+PSFKCL+PK   GDE    S  S  PPV
Sbjct: 392 AGEGSTSGSMRTAVKLPSFKCLEPK---GDEASLMSTDSARPPV 432


>ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 398

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
 Frame = +2

Query: 8   KGYRNNGEEGSSRAGRFYRRLEL--PGAKSDRWV------FFTRGLSFRSPRVVAENXXX 163
           +GYR    EGS+R  R ++R++   P AKSDRW       FFTRG S +SP+V A+N   
Sbjct: 301 RGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIAPPFFTRGSSMKSPKVRADNEEA 360

Query: 164 XXXXXXXXXXPVKMPSFKCLDPKTD 238
                      VKMPSFKCL+PK D
Sbjct: 361 STSRSNVKVA-VKMPSFKCLEPKGD 384


>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
 Frame = +2

Query: 8   KGYRNNGEEGSSRAGRFYRRLEL--PGAKSDRWV------FFTRGLSFRSPRVVAENXXX 163
           +GYR    EGS+R  R ++R++   P AKSDRW       FFTRG S +SP++ A+N   
Sbjct: 57  RGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIAPPFFTRGSSMKSPKLRADNEEA 116

Query: 164 XXXXXXXXXXPVKMPSFKCLDPKTD 238
                      VKMPSFKCL+PK D
Sbjct: 117 STSRSNVKVA-VKMPSFKCLEPKGD 140


>ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 398

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
 Frame = +2

Query: 8   KGYRNNGEEGSSRAGRFYRRLEL--PGAKSDRWV------FFTRGLSFRSPRVVAENXXX 163
           +GYR    EGS+R  R ++R++   P  KSDRW       FFTRG S +SP+V A+N   
Sbjct: 301 RGYRAGPGEGSNRGARSFKRIDRFDPETKSDRWFLKIAPPFFTRGSSMKSPKVRADNEEA 360

Query: 164 XXXXXXXXXXPVKMPSFKCLDPKTD 238
                      VK+PSF+CL+PK D
Sbjct: 361 STSRSNMKVA-VKLPSFQCLEPKGD 384


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