BLASTX nr result
ID: Mentha26_contig00007621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00007621
(632 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus... 95 2e-17
gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus... 95 2e-17
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik... 80 4e-13
emb|CBI26421.3| unnamed protein product [Vitis vinifera] 79 9e-13
ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phas... 70 5e-10
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-... 70 5e-10
ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-... 65 1e-08
gb|EXB29118.1| RNA polymerase sigma factor rpoD [Morus notabilis] 65 2e-08
gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thali... 65 2e-08
ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis tha... 64 4e-08
dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 64 4e-08
ref|NP_001185314.1| RNA polymerase sigma subunit 1 [Arabidopsis ... 64 4e-08
emb|CAA74896.1| sigma factorB [Arabidopsis thaliana] 64 4e-08
gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana] 64 4e-08
ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis ... 63 6e-08
ref|XP_002443917.1| hypothetical protein SORBIDRAFT_07g004340 [S... 56 2e-06
emb|CAA74653.1| plastid RNA polymerase sigma factor [Sorghum bic... 56 2e-06
ref|XP_004972754.1| PREDICTED: RNA polymerase sigma factor sigA-... 57 3e-06
>gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
gi|604346415|gb|EYU44878.1| hypothetical protein
MIMGU_mgv1a004509mg [Mimulus guttatus]
Length = 520
Score = 94.7 bits (234), Expect = 2e-17
Identities = 81/230 (35%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Frame = +2
Query: 62 LLLGATSYYSDLSAEKLVCS-------AGDLLXXXXXXXXXXXXXRRPHSVKALKDPHST 220
LLL ++ +YSD+S + + CS A R PHS++ALK+
Sbjct: 18 LLLSSSLFYSDVSDKFVACSTDSHCPIASSKKPINAKKSSNFFSNRHPHSIRALKEHVDA 77
Query: 221 CS--------LIHDQP----------EYLVDAVLLLQKSMLEKQWNLAPE-----XXXXX 331
S LIH EYLVDAVLLLQKS+LEKQWNL+ E
Sbjct: 78 ASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLEKQWNLSAESSTKQTVTSP 137
Query: 332 XXXXXXXXXXXXXSEIDEVACSGTSAXXXXXXXXXXXGGVD------DEMMIPQFLLLPP 493
+I +V CSGTSA G + D + ++ P
Sbjct: 138 RERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNISNSHHDNVRKQWRSIISP 197
Query: 494 QKXXXXXXSYYV----SEQLLTHSEVVRLSHKIKAGLALEERRSRLKQRL 631
+ YV SE LLTHS+VV+LS IKAGL LE+RRSRLK+RL
Sbjct: 198 ELLQNSSRRGYVKGVISEDLLTHSQVVQLSQIIKAGLLLEDRRSRLKERL 247
>gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
Length = 523
Score = 94.7 bits (234), Expect = 2e-17
Identities = 81/230 (35%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Frame = +2
Query: 62 LLLGATSYYSDLSAEKLVCS-------AGDLLXXXXXXXXXXXXXRRPHSVKALKDPHST 220
LLL ++ +YSD+S + + CS A R PHS++ALK+
Sbjct: 18 LLLSSSLFYSDVSDKFVACSTDSHCPIASSKKPINAKKSSNFFSNRHPHSIRALKEHVDA 77
Query: 221 CS--------LIHDQP----------EYLVDAVLLLQKSMLEKQWNLAPE-----XXXXX 331
S LIH EYLVDAVLLLQKS+LEKQWNL+ E
Sbjct: 78 ASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLEKQWNLSAESSTKQTVTSP 137
Query: 332 XXXXXXXXXXXXXSEIDEVACSGTSAXXXXXXXXXXXGGVD------DEMMIPQFLLLPP 493
+I +V CSGTSA G + D + ++ P
Sbjct: 138 RERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNISNSHHDNVRKQWRSIISP 197
Query: 494 QKXXXXXXSYYV----SEQLLTHSEVVRLSHKIKAGLALEERRSRLKQRL 631
+ YV SE LLTHS+VV+LS IKAGL LE+RRSRLK+RL
Sbjct: 198 ELLQNSSRRGYVKGVISEDLLTHSQVVQLSQIIKAGLLLEDRRSRLKERL 247
>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
vinifera]
Length = 497
Score = 80.5 bits (197), Expect = 4e-13
Identities = 74/216 (34%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Frame = +2
Query: 65 LLGATSYYSDLSAEKLVCSAGD-------------LLXXXXXXXXXXXXXRRPHSVKALK 205
LL ++ +YSD+ AEKL D L+ R S+KALK
Sbjct: 16 LLASSHHYSDV-AEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYTPSSNRSIQSMKALK 74
Query: 206 --------------DPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXX 343
D S+ S + D+ EYLV+A LLLQKSMLEKQWNL+ E
Sbjct: 75 EHVESASAPSTADPDLSSSSSEVEDE-EYLVEAFLLLQKSMLEKQWNLSFEEEEEEEEED 133
Query: 344 XXXXXXXXXSEIDEVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSY 523
E V CSGTSA + + L + +
Sbjct: 134 MGKKARQKRRE---VTCSGTSARQRRISGRKRVMNEKSKSRVRAALGV--ENRLKGYVKG 188
Query: 524 YVSEQLLTHSEVVRLSHKIKAGLALEERRSRLKQRL 631
VSE+LLTH++VV LS+KIKAGL LE+ +SRLK+R+
Sbjct: 189 VVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERI 224
>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 79.3 bits (194), Expect = 9e-13
Identities = 73/216 (33%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Frame = +2
Query: 65 LLGATSYYSDLSAEKLVCSAGD-------------LLXXXXXXXXXXXXXRRPHSVKALK 205
LL ++ +YSD+ AEKL D L+ R S+KALK
Sbjct: 87 LLASSHHYSDV-AEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYTPSSNRSIQSMKALK 145
Query: 206 --------------DPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXX 343
D S+ S + D+ EYLV+A LLLQKSMLEKQWNL+
Sbjct: 146 EHVESASAPSTADPDLSSSSSEVEDE-EYLVEAFLLLQKSMLEKQWNLS----------- 193
Query: 344 XXXXXXXXXSEIDEVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSY 523
+ EV CSGTSA + + L + +
Sbjct: 194 -----FKARQKRREVTCSGTSARQRRISGRKRVMNEKSKSRVRAALGV--ENRLKGYVKG 246
Query: 524 YVSEQLLTHSEVVRLSHKIKAGLALEERRSRLKQRL 631
VSE+LLTH++VV LS+KIKAGL LE+ +SRLK+R+
Sbjct: 247 VVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERI 282
>ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
gi|561004471|gb|ESW03465.1| hypothetical protein
PHAVU_011G016400g [Phaseolus vulgaris]
Length = 504
Score = 70.1 bits (170), Expect = 5e-10
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Frame = +2
Query: 248 YLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXXX 427
Y V+A+LLLQKSMLEKQW+L+ E ++ V CSG SA
Sbjct: 106 YSVEALLLLQKSMLEKQWSLSFEGEGVTEHSSKEKNCR----KVAAVTCSGVSARQRRMN 161
Query: 428 XXXXX-----GGVDDEMMIPQFLLLPPQKXXXXXXSYYVSEQLLTHSEVVRLSHKIKAGL 592
G V + I LL Q VSE+LL+H++VV LS KIK GL
Sbjct: 162 AKRKTAVKTGGAVQLKSKISPELL---QNRLKGYVKGVVSEELLSHAQVVSLSEKIKVGL 218
Query: 593 ALEERRSRLKQRL 631
+LEE +SR+K+RL
Sbjct: 219 SLEEHKSRMKERL 231
>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
arietinum]
Length = 513
Score = 70.1 bits (170), Expect = 5e-10
Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +2
Query: 248 YLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXXX 427
Y VDA+LL+QKSMLEKQW L+ E V CSG SA
Sbjct: 116 YSVDALLLMQKSMLEKQWCLSFEREVVTENSMRVKNRRKVT-----VTCSGVSARQRRMN 170
Query: 428 XXXXXGGVDDEMMIPQFLLLPP--QKXXXXXXSYYVSEQLLTHSEVVRLSHKIKAGLALE 601
+ + + P Q VSE+LL+H++VV+LS KIKAGL+L+
Sbjct: 171 SKRKISSKTGSAVQMRSAITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSLD 230
Query: 602 ERRSRLKQRL 631
E +SRLK+RL
Sbjct: 231 EHKSRLKERL 240
>ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
arietinum] gi|502126940|ref|XP_004499500.1| PREDICTED:
RNA polymerase sigma factor sigA-like isoform X2 [Cicer
arietinum]
Length = 514
Score = 65.5 bits (158), Expect = 1e-08
Identities = 49/131 (37%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Frame = +2
Query: 248 YLVDA-VLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXX 424
Y VDA +LL+QKSMLEKQW L+ E V CSG SA
Sbjct: 116 YSVDAPLLLMQKSMLEKQWCLSFEREVVTENSMRVKNRRKVT-----VTCSGVSARQRRM 170
Query: 425 XXXXXXGGVDDEMMIPQFLLLPP--QKXXXXXXSYYVSEQLLTHSEVVRLSHKIKAGLAL 598
+ + + P Q VSE+LL+H++VV+LS KIKAGL+L
Sbjct: 171 NSKRKISSKTGSAVQMRSAITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSL 230
Query: 599 EERRSRLKQRL 631
+E +SRLK+RL
Sbjct: 231 DEHKSRLKERL 241
>gb|EXB29118.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 508
Score = 65.1 bits (157), Expect = 2e-08
Identities = 49/130 (37%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Frame = +2
Query: 254 VDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXXXXX 433
VDA+LLLQKSMLEKQWNL+ + V CSG SA
Sbjct: 144 VDALLLLQKSMLEKQWNLSFNGRRKPVMSTTQTSSTDYNNNKPVVTCSGVSARHRRKR-- 201
Query: 434 XXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY----VSEQLLTHSEVVRLSHKIKAGLALE 601
+ P + P Y V LLTH+EVVRLS KIK GL+LE
Sbjct: 202 ---ASARNTPRTPA--VTPTSTRSTNDFKGYLKGVVGADLLTHAEVVRLSKKIKIGLSLE 256
Query: 602 ERRSRLKQRL 631
+ +SRL++RL
Sbjct: 257 DHKSRLRERL 266
>gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
Length = 502
Score = 65.1 bits (157), Expect = 2e-08
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Frame = +2
Query: 203 KDPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEID 382
K+ C D + V+A+LLLQKSMLEK WNL+ E +I
Sbjct: 94 KELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRK---KKIP 150
Query: 383 EVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY---VSEQLLTHS 553
+ CSG SA G + + + Y +SE +L+H+
Sbjct: 151 VITCSGISARQRRI-------GAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHA 203
Query: 554 EVVRLSHKIKAGLALEERRSRLKQRL 631
EVVRLS KIK+GL L++ +SRLK RL
Sbjct: 204 EVVRLSKKIKSGLRLDDHKSRLKDRL 229
>ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|75098242|sp|O24629.1|SIGA_ARATH RecName: Full=RNA
polymerase sigma factor sigA; Short=Sigma factor A;
Short=Sigma-A; AltName: Full=RNA polymerase sigma factor
sig1; Short=Atsig1; Short=Sigma factor 1; AltName:
Full=RNA polymerase sigma factor sig2; Short=Atsig2;
Short=Sigma factor 2; AltName: Full=RNA polymerase sigma
factor sigB; Short=Sigma factor B; Short=Sigma-B; Flags:
Precursor gi|5042421|gb|AAD38260.1|AC006193_16 RNA
polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|2353171|gb|AAB69384.1| sigma factor 1 [Arabidopsis
thaliana] gi|2443408|dbj|BAA22421.1| SigA [Arabidopsis
thaliana] gi|2558514|emb|CAA74640.1| plastid RNA
polymerase sigma factor [Arabidopsis thaliana]
gi|5478439|dbj|BAA82448.1| sigma factor SigA
[Arabidopsis thaliana] gi|17064900|gb|AAL32604.1| RNA
polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|20259916|gb|AAM13305.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana] gi|222423019|dbj|BAH19492.1|
AT1G64860 [Arabidopsis thaliana]
gi|332196177|gb|AEE34298.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana]
Length = 502
Score = 63.9 bits (154), Expect = 4e-08
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +2
Query: 203 KDPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEID 382
K+ C D + V+A+LLLQKSMLEK WNL+ E +I
Sbjct: 94 KELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRK---KKIP 150
Query: 383 EVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY---VSEQLLTHS 553
+ CSG SA G + + + Y +SE +L+H
Sbjct: 151 VITCSGISARQRRI-------GAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHV 203
Query: 554 EVVRLSHKIKAGLALEERRSRLKQRL 631
EVVRLS KIK+GL L++ +SRLK RL
Sbjct: 204 EVVRLSKKIKSGLRLDDHKSRLKDRL 229
>dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 502
Score = 63.9 bits (154), Expect = 4e-08
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +2
Query: 203 KDPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEID 382
K+ C D + V+A+LLLQKSMLEK WNL+ E +I
Sbjct: 94 KELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRK---KKIP 150
Query: 383 EVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY---VSEQLLTHS 553
+ CSG SA G + + + Y +SE +L+H
Sbjct: 151 VITCSGISARPRRI-------GAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHV 203
Query: 554 EVVRLSHKIKAGLALEERRSRLKQRL 631
EVVRLS KIK+GL L++ +SRLK RL
Sbjct: 204 EVVRLSKKIKSGLRLDDHKSRLKDRL 229
>ref|NP_001185314.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|332196178|gb|AEE34299.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana]
Length = 498
Score = 63.9 bits (154), Expect = 4e-08
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +2
Query: 203 KDPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEID 382
K+ C D + V+A+LLLQKSMLEK WNL+ E +I
Sbjct: 94 KELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRK---KKIP 150
Query: 383 EVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY---VSEQLLTHS 553
+ CSG SA G + + + Y +SE +L+H
Sbjct: 151 VITCSGISARQRRI-------GAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHV 203
Query: 554 EVVRLSHKIKAGLALEERRSRLKQRL 631
EVVRLS KIK+GL L++ +SRLK RL
Sbjct: 204 EVVRLSKKIKSGLRLDDHKSRLKDRL 229
>emb|CAA74896.1| sigma factorB [Arabidopsis thaliana]
Length = 500
Score = 63.9 bits (154), Expect = 4e-08
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +2
Query: 203 KDPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEID 382
K+ C D + V+A+LLLQKSMLEK WNL+ E +I
Sbjct: 92 KELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRK---KKIP 148
Query: 383 EVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY---VSEQLLTHS 553
+ CSG SA G + + + Y +SE +L+H
Sbjct: 149 VITCSGISARQRRI-------GAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHV 201
Query: 554 EVVRLSHKIKAGLALEERRSRLKQRL 631
EVVRLS KIK+GL L++ +SRLK RL
Sbjct: 202 EVVRLSKKIKSGLRLDDHKSRLKDRL 227
>gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana]
Length = 502
Score = 63.9 bits (154), Expect = 4e-08
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +2
Query: 203 KDPHSTCSLIHDQPEYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEID 382
K+ C D + V+A+LLLQKSMLEK WNL+ E +I
Sbjct: 94 KELEEECYDDDDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRK---KKIP 150
Query: 383 EVACSGTSAXXXXXXXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY---VSEQLLTHS 553
+ CSG SA G + + + Y +SE +L+H
Sbjct: 151 VITCSGISARQRRI-------GAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHV 203
Query: 554 EVVRLSHKIKAGLALEERRSRLKQRL 631
EVVRLS KIK+GL L++ +SRLK RL
Sbjct: 204 EVVRLSKKIKSGLRLDDHKSRLKDRL 229
>ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis lyrata subsp. lyrata]
gi|297332612|gb|EFH63030.1| RNA polymerase sigma subunit
1 [Arabidopsis lyrata subsp. lyrata]
Length = 503
Score = 63.2 bits (152), Expect = 6e-08
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 254 VDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXXXXX 433
V+A+LLLQKSMLEK WNL+ E +I + CSG SA
Sbjct: 112 VEALLLLQKSMLEKSWNLSFEKAASSESSSKRTIRK---KKIPVITCSGISARQRRI--- 165
Query: 434 XXXGGVDDEMMIPQFLLLPPQKXXXXXXSYY---VSEQLLTHSEVVRLSHKIKAGLALEE 604
G + + + Y +SE +L+H+EVVRLS KIK+GL L++
Sbjct: 166 ----GAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISEDVLSHAEVVRLSKKIKSGLRLDD 221
Query: 605 RRSRLKQRL 631
+SRLK RL
Sbjct: 222 HKSRLKDRL 230
>ref|XP_002443917.1| hypothetical protein SORBIDRAFT_07g004340 [Sorghum bicolor]
gi|241940267|gb|EES13412.1| hypothetical protein
SORBIDRAFT_07g004340 [Sorghum bicolor]
Length = 500
Score = 55.8 bits (133), Expect(2) = 2e-06
Identities = 42/129 (32%), Positives = 60/129 (46%)
Frame = +2
Query: 245 EYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXX 424
E ++A++LLQ+SMLEKQW L E VA SG SA
Sbjct: 111 ESSLEAIVLLQRSMLEKQWQLPFEDEDEDDERLTKAAVV--------VARSGVSARQRRM 162
Query: 425 XXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYYVSEQLLTHSEVVRLSHKIKAGLALEE 604
G + P+ + Q VS+ LLTH +V++LS KIK G+ L+
Sbjct: 163 SGRRRGPGRKSVTVSPELM----QSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGIWLQH 218
Query: 605 RRSRLKQRL 631
+RS+LK++L
Sbjct: 219 QRSKLKEKL 227
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 168 RNHDAPTPSRPSKILIPP 221
RNH AP + P + +PP
Sbjct: 75 RNHSAPALAPPLPLPLPP 92
>emb|CAA74653.1| plastid RNA polymerase sigma factor [Sorghum bicolor]
Length = 500
Score = 55.8 bits (133), Expect(2) = 2e-06
Identities = 42/129 (32%), Positives = 60/129 (46%)
Frame = +2
Query: 245 EYLVDAVLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXX 424
E ++A++LLQ+SMLEKQW L E VA SG SA
Sbjct: 111 ESSLEAIVLLQRSMLEKQWQLPFEDEDEDDERLTKAAVV--------VARSGVSARQRRM 162
Query: 425 XXXXXXGGVDDEMMIPQFLLLPPQKXXXXXXSYYVSEQLLTHSEVVRLSHKIKAGLALEE 604
G + P+ + Q VS+ LLTH +V++LS KIK G+ L+
Sbjct: 163 SGRRRGPGRKSVTVSPELM----QSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGIWLQH 218
Query: 605 RRSRLKQRL 631
+RS+LK++L
Sbjct: 219 QRSKLKEKL 227
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 168 RNHDAPTPSRPSKILIPP 221
RNH AP + P + +PP
Sbjct: 75 RNHSAPALAPPLPLPLPP 92
>ref|XP_004972754.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Setaria italica] gi|514793183|ref|XP_004972755.1|
PREDICTED: RNA polymerase sigma factor sigA-like isoform
X2 [Setaria italica]
Length = 499
Score = 57.4 bits (137), Expect = 3e-06
Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Frame = +2
Query: 179 RPHSVKALKDPHSTCSLIHDQP--------------------EYLVDAVLLLQKSMLEKQ 298
R H+V+AL++ HS +L P E ++A++LLQ+SMLEKQ
Sbjct: 65 RAHAVRALRN-HSAPALAPPPPPPPPEDPAALAPDLDSAFEFESSLEAIVLLQRSMLEKQ 123
Query: 299 WNLAPEXXXXXXXXXXXXXXXXXXSEIDEVACSGTSAXXXXXXXXXXXGGVDDEMMIPQF 478
W L E VA SG SA G + P+
Sbjct: 124 WELPFEDEDEEEHHSESLFAKSTVV----VARSGVSARQRRMSGRRRGTGRKSVAISPEL 179
Query: 479 LLLPPQKXXXXXXSYYVSEQLLTHSEVVRLSHKIKAGLALEERRSRLKQRL 631
+ Q VS++LLTH +VV+LS KIK G+ L+ +RS+LK++L
Sbjct: 180 M----QSRNRIYLRGTVSKELLTHKQVVQLSKKIKDGIWLQHQRSKLKEKL 226