BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00007338
         (2658 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus...  1565   0.0  
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...  1562   0.0  
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i...  1561   0.0  
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...  1555   0.0  
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su...  1553   0.0  
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr...  1553   0.0  
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...  1551   0.0  
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su...  1549   0.0  
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not...  1548   0.0  
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas...  1548   0.0  
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...  1548   0.0  
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas...  1548   0.0  
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...  1545   0.0  
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...  1543   0.0  
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...  1543   0.0  
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su...  1541   0.0  
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun...  1539   0.0  
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia...  1536   0.0  
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca...  1535   0.0  
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu...  1533   0.0  

>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
          Length = 1197

 Score = 1565 bits (4052), Expect = 0.0
 Identities = 786/854 (92%), Positives = 798/854 (93%), Gaps = 1/854 (0%)
 Frame = +2

Query: 98   MYMDDE-YEQGDTGEEQXXXXXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLD 274
            M MD+E YEQG   EE                   ITQEDAWAVISAYFEEKGLVRQQLD
Sbjct: 1    MDMDEEFYEQGYPDEE-----------FEEEDEEEITQEDAWAVISAYFEEKGLVRQQLD 49

Query: 275  SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKISFGQIYLSKPMMTESDG 454
            SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF ETIYKISFGQIYLSKPMMTESDG
Sbjct: 50   SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDG 109

Query: 455  ETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSS 634
            ETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSS
Sbjct: 110  ETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSS 169

Query: 635  YCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV 814
            YCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV
Sbjct: 170  YCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV 229

Query: 815  AEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVA 994
            AEVRSMAETQNRPPSTMF+RML+RTSAKGGSSGQYIRATLPYIR+EIPIIIVFRALGFVA
Sbjct: 230  AEVRSMAETQNRPPSTMFIRMLARTSAKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVA 289

Query: 995  DKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAK 1174
            DKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+++RIKYAK
Sbjct: 290  DKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDRRIKYAK 349

Query: 1175 EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLL 1354
            EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLL
Sbjct: 350  EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLL 409

Query: 1355 GGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAG 1534
            GGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAG
Sbjct: 410  GGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAG 469

Query: 1535 TRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACG 1714
            TRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACG
Sbjct: 470  TRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACG 529

Query: 1715 LVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPD 1894
            LVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPD
Sbjct: 530  LVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPD 589

Query: 1895 MLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDILA 2074
            MLVST       VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI A
Sbjct: 590  MLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQA 649

Query: 2075 LQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCE 2254
            LQQRESP+DGGWHDLV+KGF                  +DLV AR  P EAYSDTYTHCE
Sbjct: 650  LQQRESPDDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARINPGEAYSDTYTHCE 709

Query: 2255 IHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKP 2434
            IHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKP
Sbjct: 710  IHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKP 769

Query: 2435 LVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDE 2614
            LVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDE
Sbjct: 770  LVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDE 829

Query: 2615 EKKMGTLVKEDFGR 2656
            EKKMGTLVKEDFGR
Sbjct: 830  EKKMGTLVKEDFGR 843


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score = 1562 bits (4045), Expect = 0.0
 Identities = 779/819 (95%), Positives = 786/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIKKKDI ALQQRES E+GGWHDLV+KGF               
Sbjct: 623  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               HDLVQAR  P+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 841


>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
            cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
            polymerase family protein isoform 1 [Theobroma cacao]
          Length = 1189

 Score = 1561 bits (4041), Expect = 0.0
 Identities = 776/819 (94%), Positives = 788/819 (96%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVG++CETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVG+HRNPDMLV+T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560  SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIKKKDI ALQQRESPEDGGWHDLV+KGF               
Sbjct: 620  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680  MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 800  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 838


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score = 1555 bits (4026), Expect = 0.0
 Identities = 774/819 (94%), Positives = 785/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560  SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIK+KDI ALQQRE+PEDGGWHDLV+KGF               
Sbjct: 620  YGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLV AR  P+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680  MTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740  MGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 800  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 838


>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
            sinensis]
          Length = 1195

 Score = 1553 bits (4021), Expect = 0.0
 Identities = 771/819 (94%), Positives = 787/819 (96%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+FQDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVT++KRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVGIHR+P+MLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIKK+DI+ALQQRESPEDGGWHDLV+KGF               
Sbjct: 623  YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 682

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P+EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 841


>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
            gi|557525528|gb|ESR36834.1| hypothetical protein
            CICLE_v10027701mg [Citrus clementina]
          Length = 1195

 Score = 1553 bits (4021), Expect = 0.0
 Identities = 771/819 (94%), Positives = 787/819 (96%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+FQDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVT++KRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVGIHR+P+MLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIKK+DI+ALQQRESPEDGGWHDLV+KGF               
Sbjct: 623  YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 682

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P+EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 841


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score = 1551 bits (4015), Expect = 0.0
 Identities = 772/819 (94%), Positives = 784/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTE QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F  TQMMELLRPSLEEAFVIQNQQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELLRPSLEEAFVIQNQQ 322

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCW+GIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563  SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIV+KQRLLIKKKDI ALQQRESPEDGGWHDLVSKGF               
Sbjct: 623  YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 682

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P++AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGYNQED 802

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 841


>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
            arietinum]
          Length = 1194

 Score = 1549 bits (4011), Expect = 0.0
 Identities = 769/819 (93%), Positives = 786/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGET+TLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAK+ILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCW+GIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563  SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIV+KQRLLIKKKDI +LQQRESPE+GGWHDLVSKGF               
Sbjct: 623  YGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 802

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 841


>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 1193

 Score = 1548 bits (4009), Expect = 0.0
 Identities = 770/819 (94%), Positives = 783/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 21   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 81   FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 201  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 260

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIR EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261  IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVG GE+CETKKAYYFGYIIHRLLLC
Sbjct: 321  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLC 380

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 381  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 440

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 561  SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIKK+DI ALQQRE+PE+ GWHDLVS GF               
Sbjct: 621  YGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDTEEEETTMIS 680

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681  MTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQS++DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 801  SVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 839


>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
            gi|561011794|gb|ESW10701.1| hypothetical protein
            PHAVU_009G230400g [Phaseolus vulgaris]
          Length = 1196

 Score = 1548 bits (4009), Expect = 0.0
 Identities = 772/853 (90%), Positives = 797/853 (93%)
 Frame = +2

Query: 98   MYMDDEYEQGDTGEEQXXXXXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQLDS 277
            M ++DEYE+    +E+                  ITQEDAWAVISAYFEEKGLVRQQLDS
Sbjct: 1    MELEDEYEEQMMEDEEEEDE--------------ITQEDAWAVISAYFEEKGLVRQQLDS 46

Query: 278  FDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKISFGQIYLSKPMMTESDGE 457
            FDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D  ET+YKISFGQIYLSKPMMTESDGE
Sbjct: 47   FDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDSAETVYKISFGQIYLSKPMMTESDGE 106

Query: 458  TATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSY 637
            TA+LFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSY
Sbjct: 107  TASLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSY 166

Query: 638  CTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA 817
            CTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA
Sbjct: 167  CTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVA 226

Query: 818  EVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD 997
            EVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD
Sbjct: 227  EVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVAD 286

Query: 998  KDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKE 1177
            KDILEHICY+F DTQMM+LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTKEKRIKYAKE
Sbjct: 287  KDILEHICYDFSDTQMMDLLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKE 346

Query: 1178 ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG 1357
            ILQKEMLPHVG+GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG
Sbjct: 347  ILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG 406

Query: 1358 GLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGT 1537
            GLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAIKAKT+TSGLKYSLATGNWGQANAAGT
Sbjct: 407  GLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGT 466

Query: 1538 RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGL 1717
            RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGL
Sbjct: 467  RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGL 526

Query: 1718 VKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDM 1897
            VKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHR+PDM
Sbjct: 527  VKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDM 586

Query: 1898 LVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDILAL 2077
            LV T       VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV++QRLLIKKKDI AL
Sbjct: 587  LVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHAL 646

Query: 2078 QQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEI 2257
            QQRESPE+GGWHDLVSKGF                  +DLVQAR  P+EAYSDTYTHCEI
Sbjct: 647  QQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEI 706

Query: 2258 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 2437
            HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL
Sbjct: 707  HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPL 766

Query: 2438 VTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEE 2617
            VTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEE
Sbjct: 767  VTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEE 826

Query: 2618 KKMGTLVKEDFGR 2656
            KKMGTLVKEDFGR
Sbjct: 827  KKMGTLVKEDFGR 839


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score = 1548 bits (4008), Expect = 0.0
 Identities = 771/819 (94%), Positives = 782/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 28   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 87

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
              ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 88   VAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 147

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 148  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 207

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 208  IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 267

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIR EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 268  IRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 327

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRG+TVGVTKEKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLC
Sbjct: 328  VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 387

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 388  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 447

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 448  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 507

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 508  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 567

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVGIHR+P+MLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 568  SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 627

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIKKKDI ALQQRESPEDGGWHDLV+KGF               
Sbjct: 628  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 687

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
                DL+QAR  P EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 688  MTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 747

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 748  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 807

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 808  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 846


>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
            gi|561021391|gb|ESW20162.1| hypothetical protein
            PHAVU_006G185800g [Phaseolus vulgaris]
          Length = 1194

 Score = 1548 bits (4007), Expect = 0.0
 Identities = 770/819 (94%), Positives = 785/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83   FAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 502

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNG W+GIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 563  SPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIV+KQRLLIKK+DI ALQQRESPE+GGWHDLVSKGF               
Sbjct: 623  YGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P++AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 841


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1193

 Score = 1545 bits (4000), Expect = 0.0
 Identities = 769/819 (93%), Positives = 782/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRV+KKGHD
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVVKKGHD 142

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQD TKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTS+KGGSSGQY
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DT MMELLRPSLEEAFVIQNQQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQNQQ 322

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCW+GIHR+PDMLV T       VDVNTEVGVVRDI LKELRIYTD
Sbjct: 563  SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTD 622

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIV+KQRLLIKKKDI ALQQRESPEDGGWHDLVSKGF               
Sbjct: 623  YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 682

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P++AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 841


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
            gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
            Full=DNA-directed RNA polymerase II subunit RPB2;
            Short=RNA polymerase II subunit 2; Short=RNA polymerase
            II subunit B2; AltName: Full=DNA-directed RNA polymerase
            II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
            polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score = 1543 bits (3994), Expect = 0.0
 Identities = 776/856 (90%), Positives = 793/856 (92%), Gaps = 3/856 (0%)
 Frame = +2

Query: 98   MYMDDEYEQG---DTGEEQXXXXXXXXXXXXXXXXXXITQEDAWAVISAYFEEKGLVRQQ 268
            M M+DEYE     D  EE+                  ITQEDAWAVISAYFEEKGLVRQQ
Sbjct: 1    MDMEDEYEPQYNVDDDEEE------------------ITQEDAWAVISAYFEEKGLVRQQ 42

Query: 269  LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFVETIYKISFGQIYLSKPMMTES 448
            LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF ETIYKI+FGQIYLSKPMMTES
Sbjct: 43   LDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTES 102

Query: 449  DGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLR 628
            DGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLR
Sbjct: 103  DGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLR 162

Query: 629  SSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA 808
            SSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA
Sbjct: 163  SSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA 222

Query: 809  YVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGF 988
            +VAEVRSMA+TQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGF
Sbjct: 223  FVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGF 282

Query: 989  VADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKY 1168
            VADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKY
Sbjct: 283  VADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKY 342

Query: 1169 AKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGP 1348
            AKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGP
Sbjct: 343  AKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGP 402

Query: 1349 LLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANA 1528
            LLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANA
Sbjct: 403  LLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANA 462

Query: 1529 AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQA 1708
            AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQA
Sbjct: 463  AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQA 522

Query: 1709 CGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRN 1888
            CGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+
Sbjct: 523  CGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRD 582

Query: 1889 PDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI 2068
            PDMLV T       VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDI
Sbjct: 583  PDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDI 642

Query: 2069 LALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTH 2248
              LQQRESP++GGWHDLV+KG+                  +DLVQAR  P +AYSDTYTH
Sbjct: 643  QTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTH 702

Query: 2249 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQ 2428
            CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQ
Sbjct: 703  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQ 762

Query: 2429 KPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYR 2608
            KPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYR
Sbjct: 763  KPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR 822

Query: 2609 DEEKKMGTLVKEDFGR 2656
            DEEKKMGTLVKEDFGR
Sbjct: 823  DEEKKMGTLVKEDFGR 838


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score = 1543 bits (3994), Expect = 0.0
 Identities = 768/819 (93%), Positives = 781/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            I+QEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QPD
Sbjct: 29   ISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQPD 88

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 89   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 148

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 149  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 208

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 209  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAEAQNRPPSTMFVRMLSRTSAKGGSSGQY 268

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHIC+N  DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 269  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICFNSSDTQMMELLRPSLEEAFVIQNQQ 328

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRG+TVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 329  VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 388

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQF I
Sbjct: 389  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFXI 448

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRL+SPIGREGKLA
Sbjct: 449  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLBSPIGREGKLA 508

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 509  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 568

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNG WVGIHRNPDMLVST       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 569  SPAVIPQATKIFVNGLWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 628

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRLLIKKKD+ ALQQRESP+DGGWH+LV+KGF               
Sbjct: 629  YGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGFIEYIDTEEEETTMIS 688

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DL+ A+  P EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 689  MTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 748

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 749  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 808

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 809  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 847


>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
            tuberosum]
          Length = 1191

 Score = 1541 bits (3991), Expect = 0.0
 Identities = 767/819 (93%), Positives = 782/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80   FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNG WVGIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560  SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQRL+IKKKDI  LQQRESP++GGWHDLV+KG+               
Sbjct: 620  YGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMIS 679

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680  MTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 800  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 838


>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
            gi|462410424|gb|EMJ15758.1| hypothetical protein
            PRUPE_ppa000425mg [Prunus persica]
          Length = 1192

 Score = 1539 bits (3985), Expect = 0.0
 Identities = 760/819 (92%), Positives = 783/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 79

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ET Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+K ++KKGHD
Sbjct: 80   FAETTYRIKFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKSIVKKGHD 139

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRML+RTS+KGGSSGQY
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLARTSSKGGSSGQY 259

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIR EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260  IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGV++EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVSREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 379

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGK++NLQFAI
Sbjct: 380  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKELNLQFAI 439

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFVNGCWVGIHR+P+MLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 560  SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIV+KQRLLIKKKDI ALQQRE+PEDGGWHDLV+KGF               
Sbjct: 620  YGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQAR  P+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680  MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRS+FFRSYRDEEKKMGTLVKEDFGR
Sbjct: 800  SVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGR 838


>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1195

 Score = 1536 bits (3978), Expect = 0.0
 Identities = 765/819 (93%), Positives = 782/819 (95%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 24   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 83

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 84   FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 143

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 144  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 203

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQY
Sbjct: 204  IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 263

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 264  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 323

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 324  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 383

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 384  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 443

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 444  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 503

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1819
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE GTENFEEI
Sbjct: 504  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEXGTENFEEI 563

Query: 1820 SPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTD 1999
            SPAVIPQATKIFV+G W+GIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTD
Sbjct: 564  SPAVIPQATKIFVBGTWMGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 623

Query: 2000 YGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVSKGFXXXXXXXXXXXXXXX 2179
            YGRCSRPLFIVEKQ+LLIKKKDI  LQQRE+PE+GGWHDLV+KG+               
Sbjct: 624  YGRCSRPLFIVEKQKLLIKKKDIQQLQQRETPEEGGWHDLVAKGYIEYIDTEEEETTMIS 683

Query: 2180 XXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2359
               +DLVQA   P++AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 684  MTINDLVQASINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 743

Query: 2360 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2539
            MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 744  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 803

Query: 2540 SVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            SVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 804  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 842


>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1213

 Score = 1535 bits (3975), Expect = 0.0
 Identities = 771/837 (92%), Positives = 784/837 (93%), Gaps = 18/837 (2%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 24   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 83

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 84   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 143

Query: 560  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 739
            GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 144  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 203

Query: 740  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 919
            IAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPPSTMFVRMLSR SAKGGSSGQY
Sbjct: 204  IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGGSSGQY 263

Query: 920  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQ 1099
            IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 264  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 323

Query: 1100 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 1279
            VALDYIGKRG+TVGVTKEKRIKYAK+ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 324  VALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 383

Query: 1280 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1459
            ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 384  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 443

Query: 1460 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1639
            KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 444  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 503

Query: 1640 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE-- 1813
            KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE  
Sbjct: 504  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEVL 563

Query: 1814 ------EISPAVIPQATKIFVNGCWVGIHRNPDMLV----------STXXXXXXXVDVNT 1945
                  EISPAVIPQATKIFVNGCW+GIHR+PDMLV          S        VDVNT
Sbjct: 564  VISFIKEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRFSAEGFDVVQVDVNT 623

Query: 1946 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDILALQQRESPEDGGWHDLVS 2125
            EVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRESPEDGGWHDLVS
Sbjct: 624  EVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEDGGWHDLVS 683

Query: 2126 KGFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFP 2305
            KGF                  +DLVQAR  P+EAYSDTYTHCEIHPSLILGVCASIIPFP
Sbjct: 684  KGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFP 743

Query: 2306 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 2485
            DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 744  DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 803

Query: 2486 GINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            GINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 804  GINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 860


>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
            gi|550340301|gb|EEE85647.2| hypothetical protein
            POPTR_0004s04320g [Populus trichocarpa]
          Length = 1215

 Score = 1533 bits (3969), Expect = 0.0
 Identities = 773/836 (92%), Positives = 782/836 (93%), Gaps = 17/836 (2%)
 Frame = +2

Query: 200  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 379
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 27   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 86

Query: 380  FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 559
            F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 87   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 146

Query: 560  GEEVTETQDFTKVFIGK--------VPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI 715
            GEEVTETQDFTKVFIGK        VPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI
Sbjct: 147  GEEVTETQDFTKVFIGKASIMNYLFVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI 206

Query: 716  INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSA 895
            INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPPSTMFVRMLSRTSA
Sbjct: 207  INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSA 266

Query: 896  KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEE 1075
            KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEE
Sbjct: 267  KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEE 326

Query: 1076 AFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY 1255
            AFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY
Sbjct: 327  AFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY 386

Query: 1256 IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK 1435
            IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK
Sbjct: 387  IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK 446

Query: 1436 DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP 1615
            DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP
Sbjct: 447  DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP 506

Query: 1616 IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW 1795
            IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW
Sbjct: 507  IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW 566

Query: 1796 GTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRDIRL 1975
            GTENFEEISPAVIPQATKIFVNG WVGIHR+PDMLV T       VDVNTEVGVVRDIRL
Sbjct: 567  GTENFEEISPAVIPQATKIFVNGGWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRL 626

Query: 1976 KELRIYTDYGRCSRPLFIVEKQRLLIKKKDILALQQRES---------PEDGGWHDLVSK 2128
            KELRIYTDYGRCSRPLFIVEKQ+LLI+KKDI ALQQR S           +GGWHDLVSK
Sbjct: 627  KELRIYTDYGRCSRPLFIVEKQKLLIRKKDIHALQQRVSHLIYNDHLFKYEGGWHDLVSK 686

Query: 2129 GFXXXXXXXXXXXXXXXXXXHDLVQARDRPQEAYSDTYTHCEIHPSLILGVCASIIPFPD 2308
            GF                  HDLVQAR  P+EAYSDTYTHCEIHPSLILGVCASIIPFPD
Sbjct: 687  GFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPD 746

Query: 2309 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 2488
            HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 747  HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 806

Query: 2489 INAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 2656
            INAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 807  INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 862