BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00006300
         (1219 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   386   e-122
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]       385   e-122
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   382   e-121
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   391   e-121
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...   379   e-120
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   390   e-120
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   390   e-120
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   382   e-120
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   382   e-120
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]      383   e-120
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...   375   e-119
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   379   e-119
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   381   e-119
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr...   381   e-119
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   377   e-119
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              377   e-119
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   385   e-119
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr...   373   e-118
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal...   369   e-118
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps...   369   e-118

>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  386 bits (992), Expect(2) = e-122
 Identities = 187/237 (78%), Positives = 213/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K +V +I RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI+DD+LLF+A+CYAA+VT+
Sbjct: 737  KVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTL 796

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL E+FQAAR IM WLG+CAK+I  EN PVRWTTPLGLPVVQPY KS+RH+I+TSLQVL
Sbjct: 797  AALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVL 856

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQRE +LV+VRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AG+RFAGVHDSFWTHACDVD
Sbjct: 857  ALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMTALACRDAGIRFAGVHDSFWTHACDVD 916

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MNQILR+ FVELYS P+LENLLESFQ           PERGDFDL++VL+SPYFFN
Sbjct: 917  QMNQILRENFVELYSKPILENLLESFQAAYPELTFPPLPERGDFDLQEVLKSPYFFN 973



 Score = 81.3 bits (199), Expect(2) = e-122
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP
Sbjct: 681  QHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDP 727


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score =  385 bits (989), Expect(2) = e-122
 Identities = 186/237 (78%), Positives = 212/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQI++RL EKG I+DDK+LF A+CYAA+VTM
Sbjct: 716  KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIRKRLAEKGFINDDKVLFMAACYAAKVTM 775

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL +LFQAARAIM WLG+CAKII  EN PVRWTTPLGLPVVQPYFK++RHVI+TSLQVL
Sbjct: 776  AALGQLFQAARAIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTKRHVIRTSLQVL 835

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREGD VEVRKQ+TAFPPNFVHSLDG+HMMMTA+ACR+AGLRFAGVHDSFWTHACDVD
Sbjct: 836  ALQREGDSVEVRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGVHDSFWTHACDVD 895

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MNQILR+KFV+LYSMP+LE+LLESFQ           P+RGDFDL  VL+SPYFFN
Sbjct: 896  KMNQILREKFVDLYSMPILEDLLESFQSSYPTLRFPPLPKRGDFDLRNVLDSPYFFN 952



 Score = 82.0 bits (201), Expect(2) = e-122
 Identities = 41/49 (83%), Positives = 44/49 (89%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPXE 1071
            QHYAALGRDSFEAAAVNLVAG +P+DVYSEIAERV  IMK DSEKDP +
Sbjct: 660  QHYAALGRDSFEAAAVNLVAGHKPTDVYSEIAERVLDIMKSDSEKDPAD 708


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  382 bits (981), Expect(2) = e-121
 Identities = 185/235 (78%), Positives = 211/235 (89%)
 Frame = -1

Query: 1093 IVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMAA 914
            +V +I RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI+DD+LLF+A+CYAA+VT+AA
Sbjct: 742  LVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAA 801

Query: 913  LEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLAL 734
            L E+FQAAR IM WLG+CAK+I  EN PVRWTTPLGLPVVQPY KS+RH+I+TSLQVLAL
Sbjct: 802  LGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLAL 861

Query: 733  QREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDRM 554
            QRE + V++RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGLRFAGVHDSFWTH CDVD+M
Sbjct: 862  QRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHPCDVDQM 921

Query: 553  NQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            N+ILR+KFVELYSMP+LE+LLESFQ           PERGDFDL +VLESPYFFN
Sbjct: 922  NEILREKFVELYSMPILESLLESFQASYPALTFPPLPERGDFDLLQVLESPYFFN 976



 Score = 82.0 bits (201), Expect(2) = e-121
 Identities = 40/47 (85%), Positives = 42/47 (89%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLV GD+P+DVYSEIA RVH IMKRDS KDP
Sbjct: 684  QHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDP 730


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            tuberosum]
          Length = 1015

 Score =  391 bits (1004), Expect(2) = e-121
 Identities = 190/237 (80%), Positives = 213/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+
Sbjct: 779  KLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTL 838

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQVL
Sbjct: 839  AALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVL 898

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD
Sbjct: 899  ALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVD 958

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MN+ILR+KFVELYSMP+LE+LLESFQ           P+RGDFDL++VLESPYFFN
Sbjct: 959  QMNRILREKFVELYSMPILEDLLESFQESYPALTFPPLPKRGDFDLQEVLESPYFFN 1015



 Score = 71.6 bits (174), Expect(2) = e-121
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP
Sbjct: 723  QHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDP 769


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
            gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  379 bits (973), Expect(2) = e-120
 Identities = 183/237 (77%), Positives = 211/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD++LF+A+CY A+VT+
Sbjct: 742  KLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTL 801

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL ELFQAAR IMGWLG+CAK+I  EN PV+WTTPLGLPVVQPY+KS+RH+I+TSLQVL
Sbjct: 802  AALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVL 861

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDV+
Sbjct: 862  ALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVE 921

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MNQILR+KFVELYSMPVLENL ES Q           PERG+FDL +VL+SPYFFN
Sbjct: 922  KMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 978



 Score = 83.2 bits (204), Expect(2) = e-120
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP
Sbjct: 686  QHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDP 732


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score =  390 bits (1001), Expect(2) = e-120
 Identities = 190/237 (80%), Positives = 213/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+
Sbjct: 741  KLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTL 800

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQVL
Sbjct: 801  AALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVL 860

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL+FAGVHDSFWTHACDVD
Sbjct: 861  ALQREGDTVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVD 920

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MN+ILR+KFVELYSMP+LE+LLESFQ           P+RGDFDL +VLESPYFFN
Sbjct: 921  QMNRILREKFVELYSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977



 Score = 72.4 bits (176), Expect(2) = e-120
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLVAGD+P+DVY+EIA RV  I++ DS KDP
Sbjct: 685  QHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDP 731


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            lycopersicum]
          Length = 1007

 Score =  390 bits (1002), Expect(2) = e-120
 Identities = 190/237 (80%), Positives = 212/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+
Sbjct: 771  KLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTL 830

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQVL
Sbjct: 831  AALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVL 890

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD
Sbjct: 891  ALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVD 950

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MN+ILR+KFVELYSMP+LE+LLESFQ           P+RGDFDL +VLESPYFFN
Sbjct: 951  QMNRILREKFVELYSMPILEDLLESFQESYPALTFPPLPKRGDFDLREVLESPYFFN 1007



 Score = 71.6 bits (174), Expect(2) = e-120
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP
Sbjct: 715  QHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDP 761


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  382 bits (982), Expect(2) = e-120
 Identities = 183/237 (77%), Positives = 214/237 (90%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTY+GAREQIKRRLEEKGLISDD+L F ASCYAA+VT+
Sbjct: 739  KLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTL 798

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            +AL E+F+AAR IMGWLG+CAK+I ++N PVRWTTPLGLPVVQPY+KS+RH+I+TSLQVL
Sbjct: 799  SALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVL 858

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG+LV+VRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGLRFAGVHDSFWTHACDVD
Sbjct: 859  ALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVD 918

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            RMN ILR+KFVELYSMPVLE+LLE F+           P RGDFDL++VL+SPYFFN
Sbjct: 919  RMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975



 Score = 78.2 bits (191), Expect(2) = e-120
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM RD+ KDP
Sbjct: 683  QHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDP 729


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  382 bits (982), Expect(2) = e-120
 Identities = 183/237 (77%), Positives = 214/237 (90%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTY+GAREQIKRRLEEKGLISDD+L F ASCYAA+VT+
Sbjct: 739  KLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTL 798

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            +AL E+F+AAR IMGWLG+CAK+I ++N PVRWTTPLGLPVVQPY+KS+RH+I+TSLQVL
Sbjct: 799  SALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVL 858

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG+LV+VRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGLRFAGVHDSFWTHACDVD
Sbjct: 859  ALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVD 918

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            RMN ILR+KFVELYSMPVLE+LLE F+           P RGDFDL++VL+SPYFFN
Sbjct: 919  RMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975



 Score = 78.2 bits (191), Expect(2) = e-120
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM RD+ KDP
Sbjct: 683  QHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDP 729


>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score =  383 bits (984), Expect(2) = e-120
 Identities = 185/237 (78%), Positives = 214/237 (90%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K +V ++ RKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG+I+DD+LLFSA+CY+A+VTM
Sbjct: 753  KVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGVITDDRLLFSAACYSAKVTM 812

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            +AL +LFQAAR IM WLG+CAK+I  EN PVRWTTPLGLPVVQPY KS+RH+IKTSLQVL
Sbjct: 813  SALGQLFQAARGIMDWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVL 872

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQ+EG+ +EV+KQRTAFPPN+VHSLDGTHMMMTA+ACR+AGL+FAGVHDSFWTHACDV+
Sbjct: 873  ALQQEGEGIEVKKQRTAFPPNYVHSLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVE 932

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MNQILR KFVELY+MP+LENLLESFQ           PERGDFDLE+VLESPYFFN
Sbjct: 933  KMNQILRVKFVELYNMPILENLLESFQTAYPASTFPPLPERGDFDLEEVLESPYFFN 989



 Score = 75.9 bits (185), Expect(2) = e-120
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLVAG++P+DVYSEIA RV  IM++DS KDP
Sbjct: 697  QHYAALGRDSKEAAAVNLVAGEEPADVYSEIAVRVREIMEKDSRKDP 743


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
            gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
            superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score =  375 bits (964), Expect(2) = e-119
 Identities = 183/238 (76%), Positives = 212/238 (89%), Gaps = 1/238 (0%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD++LF+A+CY A+VT+
Sbjct: 620  KLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTL 679

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL ELFQAAR IMGWLG+CAK+I  EN PV+WTTPLGLPVVQPY+KS+RH+I+TSLQVL
Sbjct: 680  AALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVL 739

Query: 739  ALQREGD-LVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 563
            ALQREGD +VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDV
Sbjct: 740  ALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDV 799

Query: 562  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            ++MNQILR+KFVELYSMPVLENL ES Q           PERG+FDL +VL+SPYFFN
Sbjct: 800  EKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 857



 Score = 83.2 bits (204), Expect(2) = e-119
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP
Sbjct: 564  QHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDP 610


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score =  379 bits (973), Expect(2) = e-119
 Identities = 182/237 (76%), Positives = 211/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD+ LF+A+CYAA+VT+
Sbjct: 773  KILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTL 832

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
             AL E+F+AAR+IMGWLG+CAK+I  EN PVRWTTPLGLPVVQPY K++RH+I+TSLQVL
Sbjct: 833  TALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVL 892

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG  VE+RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD
Sbjct: 893  ALQREGKSVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVD 952

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
             MNQILR+KFVELY+MP+LENLLESFQ           PERG+FDLE+VLESPYFFN
Sbjct: 953  EMNQILRKKFVELYNMPILENLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1009



 Score = 79.3 bits (194), Expect(2) = e-119
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP
Sbjct: 717  QHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDP 763


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  381 bits (979), Expect(2) = e-119
 Identities = 183/237 (77%), Positives = 213/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD+ LF+A+CYAA+VT+
Sbjct: 776  KILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTL 835

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
             AL E+F+AAR+IMGWLG+CAK+I  EN PVRWTTPLGLPVVQPY K++RH+I+TSLQVL
Sbjct: 836  TALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVL 895

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG+LVE+RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD
Sbjct: 896  ALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVD 955

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
             MNQILR+KFVELY+MP+LENLLESFQ           PERG+FDLE+VLESPYFFN
Sbjct: 956  EMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 1012



 Score = 76.6 bits (187), Expect(2) = e-119
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKD 1080
            QHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KD
Sbjct: 720  QHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKD 765


>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556793|gb|ESR66807.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 986

 Score =  381 bits (979), Expect(2) = e-119
 Identities = 183/237 (77%), Positives = 213/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD+ LF+A+CYAA+VT+
Sbjct: 750  KILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTL 809

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
             AL E+F+AAR+IMGWLG+CAK+I  EN PVRWTTPLGLPVVQPY K++RH+I+TSLQVL
Sbjct: 810  TALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVL 869

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG+LVE+RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD
Sbjct: 870  ALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVD 929

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
             MNQILR+KFVELY+MP+LENLLESFQ           PERG+FDLE+VLESPYFFN
Sbjct: 930  EMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 986



 Score = 76.6 bits (187), Expect(2) = e-119
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKD 1080
            QHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KD
Sbjct: 694  QHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKD 739


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  377 bits (967), Expect(2) = e-119
 Identities = 180/237 (75%), Positives = 210/237 (88%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTY+GAREQIKRRL EKGLI+D++LLF+A+CYAA+VT+
Sbjct: 743  KVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTL 802

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL E+FQAAR IM WLG CAK+I  EN PV+WTTPLGLPV+QPY KS+RH+I+TSLQVL
Sbjct: 803  AALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVL 862

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG +V +RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD
Sbjct: 863  ALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVD 922

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MNQILR+KFVELYSMP+LENLLESFQ           P+RG+FDL +VLESPYFFN
Sbjct: 923  KMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979



 Score = 79.7 bits (195), Expect(2) = e-119
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP
Sbjct: 687  QHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDP 733


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  377 bits (967), Expect(2) = e-119
 Identities = 180/237 (75%), Positives = 210/237 (88%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTY+GAREQIKRRL EKGLI+D++LLF+A+CYAA+VT+
Sbjct: 572  KVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTL 631

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL E+FQAAR IM WLG CAK+I  EN PV+WTTPLGLPV+QPY KS+RH+I+TSLQVL
Sbjct: 632  AALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVL 691

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG +V +RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD
Sbjct: 692  ALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVD 751

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MNQILR+KFVELYSMP+LENLLESFQ           P+RG+FDL +VLESPYFFN
Sbjct: 752  KMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 808



 Score = 79.7 bits (195), Expect(2) = e-119
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP
Sbjct: 516  QHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDP 562


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score =  385 bits (989), Expect(2) = e-119
 Identities = 186/237 (78%), Positives = 213/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+
Sbjct: 741  KLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTL 800

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQ+L
Sbjct: 801  AALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQIL 860

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL+FAGVHDSFWTHACDVD
Sbjct: 861  ALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVD 920

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
            +MN+ILR+KFVELYS+P+LE+LLE+FQ           P+RGDF+L +VLESPYFFN
Sbjct: 921  QMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977



 Score = 70.9 bits (172), Expect(2) = e-119
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP
Sbjct: 685  QHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDP 731


>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
            gi|557106040|gb|ESQ46365.1| hypothetical protein
            EUTSA_v10000030mg [Eutrema salsugineum]
          Length = 993

 Score =  373 bits (958), Expect(2) = e-118
 Identities = 178/237 (75%), Positives = 211/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+ISD+++LFSA+CYAA+VT+
Sbjct: 757  KILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERMLFSAACYAAKVTL 816

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL E+F+AARAIM WLG+CAKII  +NHPVRW TPLGLPVVQPY +S+RH+I+TSLQVL
Sbjct: 817  AALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVL 876

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG+ V+VRKQRTAFPPNFVHSLDGTHMMMTA+ACR AGL FAGVHDS+WTHACDVD
Sbjct: 877  ALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVD 936

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
             MN+ILR+KFVELY+ P+LE+LL+SFQ           P+RGDFDL++VL+S YFFN
Sbjct: 937  TMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 993



 Score = 82.0 bits (201), Expect(2) = e-118
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDP
Sbjct: 701  QHYAALGRDSFEAAAVNLVAGEKPADVYSEISLRVHEIMKKDSSKDP 747


>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
            gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
            Full=DNA-directed RNA polymerase 3, chloroplastic; Flags:
            Precursor gi|2330560|emb|CAA69972.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|2330564|emb|CAA69717.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
            polymerase 3 [Arabidopsis thaliana]
          Length = 993

 Score =  369 bits (948), Expect(2) = e-118
 Identities = 175/237 (73%), Positives = 211/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I+D+++LF+A+CY+A+VT+
Sbjct: 757  KILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTL 816

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL E+F+AARAIM WLG+CAKII  +NHPVRW TPLGLPVVQPY +S+RH+I+TSLQVL
Sbjct: 817  AALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVL 876

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG+ V+VRKQRTAFPPNFVHSLDGTHMMMTA+ACR AGL FAGVHDS+WTHACDVD
Sbjct: 877  ALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVD 936

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
             MN+ILR+KFVELY+ P+LE+LL+SFQ           P+RGDFDL++VL+S YFFN
Sbjct: 937  TMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 993



 Score = 83.2 bits (204), Expect(2) = e-118
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDP
Sbjct: 701  QHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDP 747


>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
            gi|482564829|gb|EOA29019.1| hypothetical protein
            CARUB_v10025273mg [Capsella rubella]
          Length = 991

 Score =  369 bits (948), Expect(2) = e-118
 Identities = 175/237 (73%), Positives = 211/237 (89%)
 Frame = -1

Query: 1099 KEIVRRIXRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 920
            K ++ ++ RKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+I+D+++LF+A+CY+A+VT+
Sbjct: 755  KILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTL 814

Query: 919  AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 740
            AAL E+F+AARAIM WLG+CAKII  +NHPVRW TPLGLPVVQPY +S+RH+I+TSLQVL
Sbjct: 815  AALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVL 874

Query: 739  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 560
            ALQREG+ V+VRKQRTAFPPNFVHSLDGTHMMMTA+ACR AGL FAGVHDS+WTHACDVD
Sbjct: 875  ALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVD 934

Query: 559  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 389
             MN+ILR+KFVELY+ P+LE+LL+SFQ           P+RGDFDL++VL+S YFFN
Sbjct: 935  TMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 991



 Score = 83.2 bits (204), Expect(2) = e-118
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -3

Query: 1217 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDP 1077
            QHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDP
Sbjct: 699  QHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDP 745