BLASTX nr result

ID: Mentha26_contig00005838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00005838
         (315 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529461.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_007020738.1| LIM and calponin domains-containing protein ...    56   4e-06
emb|CBI26677.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_002529461.1| conserved hypothetical protein [Ricinus communis]
           gi|223531077|gb|EEF32927.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
 Frame = +1

Query: 1   SVPLRSKFLYFIVNILIVAVGAEAGLLSFFFDSP---RNNKRTSPLKP----HAFISEEK 159
           S  +R K+LYFI+N+LIVA+GAEAGLLS  F  P    + K   P+      H   S E+
Sbjct: 26  SSSIRPKYLYFIINLLIVALGAEAGLLSAAFSKPILDHDRKHPVPVSTAQDHHQSSSPEQ 85

Query: 160 LFADQCSNSLVLRCPSEKIVDEE---QKATIKKSASTPSIFFI 279
             A      +V +  SEKIV      +   +KK  S PS+FFI
Sbjct: 86  --AKVSKTRVVEKSASEKIVRSSSITKVEKVKKCPSMPSLFFI 126


>ref|XP_007020738.1| LIM and calponin domains-containing protein 1, putative [Theobroma
           cacao] gi|508720366|gb|EOY12263.1| LIM and calponin
           domains-containing protein 1, putative [Theobroma cacao]
          Length = 188

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
 Frame = +1

Query: 1   SVPLRSKFLYFIVNILIVAVGAEAGLLSFF------FDSPRNNKRTSPLKPHAFISEEKL 162
           S  LR  +LYF++N+LI+A+GAEAGLLS F         P   + T  ++      ++KL
Sbjct: 26  SSSLRPTYLYFVLNLLIIALGAEAGLLSVFSRPAYVAAKPVTAQETKAVESSK--DDQKL 83

Query: 163 FA---DQCSNSLVLRCPSEKIVDEEQKATIKKSASTPSIFFI 279
            A   ++    +V +  SEKIV   +   +KK  STPS+FFI
Sbjct: 84  VAPANNEEKAKVVEKSASEKIVGTVKVDKVKKCPSTPSLFFI 125


>emb|CBI26677.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 22/115 (19%)
 Frame = +1

Query: 1   SVPLRSKFLYFIV-NILIVAVGAEAGLLSFFFDSPRNNKRTSPLK-------PHAFISEE 156
           S  LR+ +LYFI+ N+LI+A+GAEAGLLS F   P++ K   P+        P     ++
Sbjct: 26  SSSLRTTYLYFIIINLLIIALGAEAGLLS-FSKPPQDKKYAVPVSAKPLSTPPDQAAPDK 84

Query: 157 KLFADQCSNSLVLRCP--------------SEKIVDEEQKATIKKSASTPSIFFI 279
           +  ++     L+L  P              SEKIV   + + ++K  STPS+FFI
Sbjct: 85  EASSNSTDTGLLLTTPERTEKKAKVAEKSASEKIVGAAKLSKVRKCPSTPSLFFI 139


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