BLASTX nr result

ID: Mentha26_contig00005670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00005670
         (515 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015539.1| RING/U-box superfamily protein [Theobroma ca...    65   1e-08
ref|XP_004139202.1| PREDICTED: E3 ubiquitin-protein ligase synov...    61   1e-07
ref|XP_002520020.1| protein binding protein, putative [Ricinus c...    56   4e-06
ref|XP_004169788.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    56   6e-06

>ref|XP_007015539.1| RING/U-box superfamily protein [Theobroma cacao]
           gi|508785902|gb|EOY33158.1| RING/U-box superfamily
           protein [Theobroma cacao]
          Length = 543

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
 Frame = +3

Query: 3   PSPSTLVWSPGHTSLPQTFGPMMANDDGEVAASG-----STQQYQFP----NMTFMQSPQ 155
           PS +TLVWSPG+  LPQ +GP  + D  +V +SG       QQ+  P    N++F Q P 
Sbjct: 400 PSANTLVWSPGYAVLPQAYGP--SADSTKVESSGERTFIGQQQFAIPGGHANLSFPQFPH 457

Query: 156 GTFVPSEFLGHNGQYGSASGAQ---PDIQV---KLIERQIE 260
             FVP E  G NG  G  SG+    PD Q+   K+I+++IE
Sbjct: 458 CVFVPFELPGANGNSGEGSGSYQNIPDSQLEAQKIIQQKIE 498


>ref|XP_004139202.1| PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis
           sativus]
          Length = 558

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 23/132 (17%)
 Frame = +3

Query: 3   PSPSTLVWSPGHTSLPQTFGPMMAND----DGEVAASGSTQQYQFP----NMTFMQSPQG 158
           P  STLVWS G+  +PQ   P+  ++    +GE + +G  Q + FP    N++F Q PQ 
Sbjct: 401 PCASTLVWSLGYAVVPQVERPLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQN 460

Query: 159 TFV---PSEFLGHN----GQYGSASGAQPDIQVKLIERQIEFXXXXXXXXXEKKI----- 302
            FV   P E  G+N    G   + SG+Q + Q K +++QIEF         + K+     
Sbjct: 461 IFVPFQPREGTGNNIEELGSSLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSR 520

Query: 303 ---DADVKGKAV 329
              +AD KGK++
Sbjct: 521 GASEADKKGKSL 532


>ref|XP_002520020.1| protein binding protein, putative [Ricinus communis]
           gi|223540784|gb|EEF42344.1| protein binding protein,
           putative [Ricinus communis]
          Length = 536

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/128 (34%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
 Frame = +3

Query: 3   PSPSTLVWSPGHTSLPQTFGPMMANDDGEVAASGSTQ-QYQF----PNMTFMQSPQGTFV 167
           PS +TLVWSPG+  LPQ   P+     GE A  G +Q Q  F     N+T  Q PQ  FV
Sbjct: 402 PSANTLVWSPGYALLPQAQRPLADPTGGEQAFVGQSQPQPAFHAGPSNLTLPQFPQCVFV 461

Query: 168 PSEFLGHNGQYGSASGAQP----DIQVKLIERQIEFXXXXXXXXXEKKID---------- 305
           P +    +G  G   G  P    + Q K ++ QIE          + K +          
Sbjct: 462 PFQVPNDSGAQGERLGNMPNCELEAQKKFLQYQIEVLQRQLQLLHQPKAEDSIHTDPATS 521

Query: 306 ADVKGKAV 329
           +D KGKAV
Sbjct: 522 SDSKGKAV 529


>ref|XP_004169788.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           synoviolin-like, partial [Cucumis sativus]
          Length = 501

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
 Frame = +3

Query: 3   PSPSTLVWSPGHTSLPQTFGPMMAND----DGEVAASGSTQQYQFP----NMTFMQSPQG 158
           P  STLVWS G+  +PQ   P+  ++    +GE + +G  Q + FP    N++F Q PQ 
Sbjct: 401 PCASTLVWSLGYAVVPQVERPLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQN 460

Query: 159 TFV---PSEFLGHN----GQYGSASGAQPDIQVKLIERQIE 260
            FV   P E  G+N    G   + SG+Q + Q K +++QIE
Sbjct: 461 IFVPFQPREGTGNNIEELGSSLNVSGSQLEAQEKFLQQQIE 501


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