BLASTX nr result
ID: Mentha26_contig00004781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00004781
(350 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 78 1e-12
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 78 1e-12
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 73 5e-11
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 73 5e-11
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 73 5e-11
ref|XP_007034248.1| ARM repeat superfamily protein, putative [Th... 67 3e-09
gb|EYU32256.1| hypothetical protein MIMGU_mgv1a0000162mg, partia... 64 2e-08
ref|XP_002869353.1| hypothetical protein ARALYDRAFT_353720 [Arab... 61 2e-07
gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis] 59 7e-07
ref|XP_002893478.1| predicted protein [Arabidopsis lyrata subsp.... 58 1e-06
ref|XP_002890657.1| predicted protein [Arabidopsis lyrata subsp.... 58 1e-06
ref|XP_004969406.1| PREDICTED: small subunit processome componen... 56 6e-06
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 55 1e-05
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/104 (39%), Positives = 56/104 (53%)
Frame = +1
Query: 37 KDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXXXX 216
K E + + ++V + ++HLIT FALG+LHN +K +KLN DGQ
Sbjct: 1494 KTDEPRKKVSLGKVVGSESHYAHLITVFALGLLHNRIKNMKLNKKDGQLLSMLDPFVKQL 1553
Query: 217 GQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL SKYE+I++AA RC QAD IK++LL I
Sbjct: 1554 GSCLSSKYEDILSAALRCIALLVRLPLPALETQADGIKSALLDI 1597
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/104 (39%), Positives = 56/104 (53%)
Frame = +1
Query: 37 KDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXXXX 216
K E + + ++V + ++HLIT FALG+LHN +K +KLN DGQ
Sbjct: 1758 KTDEPRKKVSLGKVVGSESHYAHLITVFALGLLHNRIKNMKLNKKDGQLLSMLDPFVKQL 1817
Query: 217 GQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL SKYE+I++AA RC QAD IK++LL I
Sbjct: 1818 GSCLSSKYEDILSAALRCIALLVRLPLPALETQADGIKSALLDI 1861
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 72.8 bits (177), Expect = 5e-11
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 7 ANRSILQADN-KDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQX 183
AN S A+N K+ G+ I + R++ SHLIT FALG+LH LK LKL D +
Sbjct: 1591 ANSSSKGANNYKNDVRGKTISSGRVIVAKSTCSHLITVFALGLLHKRLKNLKLKKHDEEL 1650
Query: 184 XXXXXXXXXXXGQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL SKYE+I++A+ RC QADK+K +LL I
Sbjct: 1651 LSKLDSFVTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATLLDI 1705
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 72.8 bits (177), Expect = 5e-11
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 7 ANRSILQADN-KDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQX 183
AN S A+N K+ G+ I + R++ SHLIT FALG+LH LK LKL D +
Sbjct: 1987 ANSSSKGANNYKNDVRGKTISSGRVIVAKSTCSHLITVFALGLLHKRLKNLKLKKHDEEL 2046
Query: 184 XXXXXXXXXXXGQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL SKYE+I++A+ RC QADK+K +LL I
Sbjct: 2047 LSKLDSFVTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATLLDI 2101
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 72.8 bits (177), Expect = 5e-11
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 7 ANRSILQADN-KDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQX 183
AN S A+N K+ G+ I + R++ SHLIT FALG+LH LK LKL D +
Sbjct: 1988 ANSSSKGANNYKNDVRGKTISSGRVIVAKSTCSHLITVFALGLLHKRLKNLKLKKHDEEL 2047
Query: 184 XXXXXXXXXXXGQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL SKYE+I++A+ RC QADK+K +LL I
Sbjct: 2048 LSKLDSFVTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATLLDI 2102
>ref|XP_007034248.1| ARM repeat superfamily protein, putative [Theobroma cacao]
gi|508713277|gb|EOY05174.1| ARM repeat superfamily
protein, putative [Theobroma cacao]
Length = 2725
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/106 (37%), Positives = 52/106 (49%)
Frame = +1
Query: 31 DNKDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXX 210
+ K SGQA T SHLIT FALGVL N +K +KL+ D Q
Sbjct: 2006 NEKTVFSGQAFGTKSAC------SHLITVFALGVLQNRIKSIKLDKNDEQLLSMLDPFIK 2059
Query: 211 XXGQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL SKYE++++A+ RC Q+DK+K +LL I
Sbjct: 2060 LLGNCLSSKYEDVLSASLRCLTPLVRLPLPSLESQSDKLKVTLLSI 2105
>gb|EYU32256.1| hypothetical protein MIMGU_mgv1a0000162mg, partial [Mimulus guttatus]
Length = 2383
Score = 63.9 bits (154), Expect = 2e-08
Identities = 42/101 (41%), Positives = 49/101 (48%)
Frame = +1
Query: 46 ESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXXXXGQC 225
E QAI+TNRL+NVD+RFSHLITAF+LGVL N++KKL L D Q
Sbjct: 1703 EGVQAIQTNRLLNVDQRFSHLITAFSLGVLQNHMKKLNLKGVDEQLLSL----------- 1751
Query: 226 LGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
C QADKIK+SL VI
Sbjct: 1752 --------------CLTLLVRLPLPSLQSQADKIKSSLFVI 1778
>ref|XP_002869353.1| hypothetical protein ARALYDRAFT_353720 [Arabidopsis lyrata subsp.
lyrata] gi|297315189|gb|EFH45612.1| hypothetical protein
ARALYDRAFT_353720 [Arabidopsis lyrata subsp. lyrata]
Length = 2855
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/95 (35%), Positives = 49/95 (51%)
Frame = +1
Query: 64 ETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXXXXGQCLGSKYE 243
ET L + HLIT FAL +L+N +KKLKL+ D + CL SKYE
Sbjct: 1926 ETTGLFFGPKSCPHLITVFALDLLYNRMKKLKLDNTDEELLSKLDPFVKLLAGCLSSKYE 1985
Query: 244 NIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
+I++++ RCF +AD++K +LL I
Sbjct: 1986 DIVSSSLRCFTSLVKFPLPSLTSEADELKTALLTI 2020
>gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis]
Length = 2341
Score = 58.9 bits (141), Expect = 7e-07
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +1
Query: 10 NRSILQADN--KDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQX 183
N SI AD K+ G+ I + R+ SHLI FALG+LH +K + N D
Sbjct: 1618 NLSIPGADGHQKNEAGGKNISSGRVKGAKSLCSHLIMVFALGILHKSVKNIGKN--DLPV 1675
Query: 184 XXXXXXXXXXXGQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL SKYE +++AA RC Q DKIK +L I
Sbjct: 1676 LSMLDPFVALLGSCLNSKYEEVVSAALRCLIPLVRLPLPSIGFQVDKIKRALFDI 1730
>ref|XP_002893478.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339320|gb|EFH69737.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 2520
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/82 (36%), Positives = 42/82 (51%)
Frame = +1
Query: 103 HLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXXXXGQCLGSKYENIITAAFRCFXXX 282
HLIT FAL +LHN LK++ LN + CL SKYE++++ + RCF
Sbjct: 1880 HLITVFALDLLHNRLKQMDLNNNNEGLVSMLDPFVKLLAGCLSSKYEDVVSLSVRCFTPL 1939
Query: 283 XXXXXXXXXXQADKIKNSLLVI 348
+ADK+K +LL I
Sbjct: 1940 SKLQLRSFKSEADKVKTALLTI 1961
>ref|XP_002890657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336499|gb|EFH66916.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 2538
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/82 (36%), Positives = 42/82 (51%)
Frame = +1
Query: 103 HLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXXXXGQCLGSKYENIITAAFRCFXXX 282
HLIT FAL +LHN LK++ LN + CL SKYE++++ + RCF
Sbjct: 1898 HLITVFALDLLHNRLKQIDLNNANEGLVSMLDPFVKLLAGCLSSKYEDVVSLSVRCFTPL 1957
Query: 283 XXXXXXXXXXQADKIKNSLLVI 348
+ADK+K +LL I
Sbjct: 1958 SKLQLRSFKSEADKVKTALLTI 1979
>ref|XP_004969406.1| PREDICTED: small subunit processome component 20 homolog [Setaria
italica]
Length = 2708
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 100 SHLITAFALGVLHNYLKKLKLNPGDGQXXXXXXXXXXXXGQCLGSKYENIITAAFRCFXX 279
S+++T FAL +L N LK +KL+ D Q G+CL SKYE++++ AFRC
Sbjct: 2028 SYILTKFALDLLRNRLKSIKLDKEDEQLLKMLDPFVDLLGECLNSKYESVLSVAFRCLAL 2087
Query: 280 XXXXXXXXXXXQADKIKNSLLVI 348
A+ IKN L+ I
Sbjct: 2088 LVKLPLPSLRDNANIIKNVLMDI 2110
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/114 (28%), Positives = 54/114 (47%)
Frame = +1
Query: 7 ANRSILQADNKDAESGQAIETNRLVNVDRRFSHLITAFALGVLHNYLKKLKLNPGDGQXX 186
++ ++ + ++ S + + + R+V SHLI FAL + N +K++KL+ Q
Sbjct: 1860 SSSAVAKLHSRGDVSQKTVSSGRVVGTKSVCSHLIALFALRLFQNRIKRVKLDKNAEQLL 1919
Query: 187 XXXXXXXXXXGQCLGSKYENIITAAFRCFXXXXXXXXXXXXXQADKIKNSLLVI 348
G CL S YE+I++A+ C QAD+IK +LL I
Sbjct: 1920 SMLDPFVELLGNCLSSNYEDILSASLTCLTPLVRLPLPSLTSQADRIKVTLLDI 1973