BLASTX nr result
ID: Mentha26_contig00002361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00002361
(1112 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 396 e-108
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 363 9e-98
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 357 5e-96
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p... 353 6e-95
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p... 353 6e-95
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ... 353 6e-95
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 348 2e-93
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr... 348 2e-93
gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Mimulus... 345 3e-92
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 342 2e-91
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s... 336 9e-90
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 336 9e-90
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 335 3e-89
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 331 3e-88
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 330 9e-88
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 325 2e-86
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 320 9e-85
gb|ABU45189.1| unknown [Capsicum frutescens] 320 9e-85
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 308 2e-81
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s... 301 3e-79
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 396 bits (1018), Expect = e-108
Identities = 202/362 (55%), Positives = 254/362 (70%), Gaps = 7/362 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
Y PS+DP T+LY+ QYPLRPLWRPYELD+RC+EVRVK SAEVEVDLA+DVDSKNYD+
Sbjct: 114 YLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSD 173
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
ADP++ M KQTL SWKPP G VGVL GNKLHLNPIHAVVQLRPSM+H + SK+R
Sbjct: 174 ADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRR 233
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAP-----EPIKDSEEEWVPLKYHSMSSDMAA 572
T +++ED K EE +G KKQ P E KD+ E+W+PL YH SD++
Sbjct: 234 TTASSNLEDNTKGEEVT----TGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISM 289
Query: 573 GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
Y++KMV + S + FSM+ DY+N+LCPGT ++ S GP R LL+ PL ERF+TWLL
Sbjct: 290 SYVRKMVEHDSSHIQFSMN-HDYVNTLCPGTSNENNGSNGP-SRVLLSLPLEERFRTWLL 347
Query: 753 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYV 926
+GPP+HRFD LK+LAPD S+ GLW+P++SL+YG GI ALAR+YV
Sbjct: 348 QGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYV 407
Query: 927 LLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
LLLFS+ II + QLP+ L +AM+DVL +A R L DWK KE PD+ FI+LNP +V
Sbjct: 408 LLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIV 467
Query: 1107 KK 1112
++
Sbjct: 468 RE 469
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 363 bits (931), Expect = 9e-98
Identities = 191/360 (53%), Positives = 236/360 (65%), Gaps = 8/360 (2%)
Frame = +3
Query: 57 PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
P D T++Y+ QYPLRP WRPYEL ERC EVRVKP SAEVEVDL+IDVDSKNYD A
Sbjct: 113 PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172
Query: 237 KLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRTDV 416
+M KQTL+ SWKPP+ G VGVL GNKLHLNPIHAVVQLRPSM +L+ +K++ +V
Sbjct: 173 AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232
Query: 417 GNDVEDVMKLEEQQEGKHSGMSKKQK-----APEPIKDSEEEWVPLKYHSMSSDMAAGYL 581
D +KLE E + G KKQ E D+ E WVPLKYHS SD +A YL
Sbjct: 233 TGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYL 292
Query: 582 QKMVAREGSEVHFSMSPDDYLNSLC-PGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEG 758
QKMVA + S + F MSP +Y+NSLC PG D SKG RR LL+ PL ERFKT L EG
Sbjct: 293 QKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEG 352
Query: 759 PPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLL 932
PP+HRF LK+ APD+S+ GLWVP++SL++ G G+A LAR+Y+LL
Sbjct: 353 PPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILL 412
Query: 933 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
LFSK +I Q+ L KA+K L LA R +DWK KE D++F++L+P +V++
Sbjct: 413 LFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVRE 472
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 357 bits (916), Expect = 5e-96
Identities = 188/355 (52%), Positives = 232/355 (65%), Gaps = 3/355 (0%)
Frame = +3
Query: 57 PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
P D T++Y+ QYPLRP WRPYEL ERC EVRVKP SAEVEVDL+IDVDSKNYD A
Sbjct: 113 PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172
Query: 237 KLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRTDV 416
+M KQTL+ SWKPP+ G VGVL GNKLHLNPIHAVVQLRPSM +L+ +K++ +V
Sbjct: 173 AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232
Query: 417 GNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQKMVA 596
D +KLE E + G KKQ WVPLKYHS SD +A YLQKMVA
Sbjct: 233 TGDTNSAVKLEVSNEEESVGSLKKQ-----------SWVPLKYHSSESDFSARYLQKMVA 281
Query: 597 REGSEVHFSMSPDDYLNSLC-PGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLHR 773
+ S + F MSP +Y+NSLC PG D SKG RR LL+ PL ERFKT L EGPP+HR
Sbjct: 282 EDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHR 341
Query: 774 FDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLLLFSKD 947
F LK+ APD+S+ GLWVP++SL++ G G+A LAR+Y+LLLFSK
Sbjct: 342 FSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKG 401
Query: 948 VIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
+I Q+ L KA+K L LA R +DWK KE D++F++L+P +V++
Sbjct: 402 PLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVRE 456
>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao] gi|508699254|gb|EOX91150.1|
Transcription regulators,zinc ion binding, putative
isoform 3 [Theobroma cacao]
Length = 736
Score = 353 bits (907), Expect = 6e-95
Identities = 190/361 (52%), Positives = 236/361 (65%), Gaps = 7/361 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F PS+D TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DVDS NYD+
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L+M KQTL+ SW PP+ G VGVL G+KLHLNPIHAVVQLRPSM HL SK++
Sbjct: 188 RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKK-----QKAPEPIKDSEEEWVPLKYHSMSSDMAA 572
D E +K+EE +GK +G S K Q + E D +E WVPLKYHS +D +A
Sbjct: 248 NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307
Query: 573 GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
YLQ+M+A E + F+MSP DY++SLCPG ++ ++GP RR LL+ PL ER K L
Sbjct: 308 QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366
Query: 753 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 929
EGPP HRF LK+ APD SI GLWVP++SL++ D +LAR+YVL
Sbjct: 367 EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426
Query: 930 LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
LLFSK+ II Q+ SP + +K L LA R KDWKLKE D F +L P +V
Sbjct: 427 LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486
Query: 1107 K 1109
K
Sbjct: 487 K 487
>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao] gi|508699253|gb|EOX91149.1|
Transcription regulators,zinc ion binding, putative
isoform 2 [Theobroma cacao]
Length = 588
Score = 353 bits (907), Expect = 6e-95
Identities = 190/361 (52%), Positives = 236/361 (65%), Gaps = 7/361 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F PS+D TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DVDS NYD+
Sbjct: 31 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 90
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L+M KQTL+ SW PP+ G VGVL G+KLHLNPIHAVVQLRPSM HL SK++
Sbjct: 91 RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 150
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKK-----QKAPEPIKDSEEEWVPLKYHSMSSDMAA 572
D E +K+EE +GK +G S K Q + E D +E WVPLKYHS +D +A
Sbjct: 151 NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 210
Query: 573 GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
YLQ+M+A E + F+MSP DY++SLCPG ++ ++GP RR LL+ PL ER K L
Sbjct: 211 QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 269
Query: 753 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 929
EGPP HRF LK+ APD SI GLWVP++SL++ D +LAR+YVL
Sbjct: 270 EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 329
Query: 930 LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
LLFSK+ II Q+ SP + +K L LA R KDWKLKE D F +L P +V
Sbjct: 330 LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 389
Query: 1107 K 1109
K
Sbjct: 390 K 390
>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
gi|508699252|gb|EOX91148.1| SIN-like family protein,
putative isoform 1 [Theobroma cacao]
Length = 700
Score = 353 bits (907), Expect = 6e-95
Identities = 190/361 (52%), Positives = 236/361 (65%), Gaps = 7/361 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F PS+D TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DVDS NYD+
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L+M KQTL+ SW PP+ G VGVL G+KLHLNPIHAVVQLRPSM HL SK++
Sbjct: 188 RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKK-----QKAPEPIKDSEEEWVPLKYHSMSSDMAA 572
D E +K+EE +GK +G S K Q + E D +E WVPLKYHS +D +A
Sbjct: 248 NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307
Query: 573 GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
YLQ+M+A E + F+MSP DY++SLCPG ++ ++GP RR LL+ PL ER K L
Sbjct: 308 QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366
Query: 753 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 929
EGPP HRF LK+ APD SI GLWVP++SL++ D +LAR+YVL
Sbjct: 367 EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426
Query: 930 LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
LLFSK+ II Q+ SP + +K L LA R KDWKLKE D F +L P +V
Sbjct: 427 LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486
Query: 1107 K 1109
K
Sbjct: 487 K 487
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 348 bits (894), Expect = 2e-93
Identities = 178/360 (49%), Positives = 241/360 (66%), Gaps = 5/360 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F PS+D +++LY+ QYPLRPLWRPYELDERC+EVRVKP+++EVE+DL+IDVDS N+D+
Sbjct: 120 FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L M KQTL+ +W PP+A G +GVL GNKLHLNPIHAVVQLR SM L SK++
Sbjct: 180 KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQK----APEPIKDSEEEWVPLKYHSMSSDMAAG 575
+V +++ +KLE+ + K G SKKQ + E + EE WVPLKYH SD +A
Sbjct: 240 NNVASEIP--VKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSAR 297
Query: 576 YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 755
YLQ+M+ E S +HF+M+P DY++SLCPG ++ SKGP RR LL+ PL ERFK L E
Sbjct: 298 YLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCE 357
Query: 756 GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLL 932
G P+ RF TL + AP+D++ GLW PR+ L++ D + LAR+YVLL
Sbjct: 358 GEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLL 417
Query: 933 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
FSK+ ++K + L SP L +K L+ A R KDWK ++ DL+FI+ +P +V K
Sbjct: 418 SFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIK 477
>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|557527706|gb|ESR38956.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 637
Score = 348 bits (894), Expect = 2e-93
Identities = 178/360 (49%), Positives = 241/360 (66%), Gaps = 5/360 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F PS+D +++LY+ QYPLRPLWRPYELDERC+EVRVKP+++EVE+DL+IDVDS N+D+
Sbjct: 120 FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L M KQTL+ +W PP+A G +GVL GNKLHLNPIHAVVQLR SM L SK++
Sbjct: 180 KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQK----APEPIKDSEEEWVPLKYHSMSSDMAAG 575
+V +++ +KLE+ + K G SKKQ + E + EE WVPLKYH SD +A
Sbjct: 240 NNVASEIP--VKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSAR 297
Query: 576 YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 755
YLQ+M+ E S +HF+M+P DY++SLCPG ++ SKGP RR LL+ PL ERFK L E
Sbjct: 298 YLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCE 357
Query: 756 GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLL 932
G P+ RF TL + AP+D++ GLW PR+ L++ D + LAR+YVLL
Sbjct: 358 GEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLL 417
Query: 933 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
FSK+ ++K + L SP L +K L+ A R KDWK ++ DL+FI+ +P +V K
Sbjct: 418 SFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIK 477
>gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Mimulus guttatus]
Length = 525
Score = 345 bits (884), Expect = 3e-92
Identities = 190/360 (52%), Positives = 232/360 (64%), Gaps = 5/360 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
Y SVDP T L+++QYPLRPLWRPYELDE+C EVRVKP+ VE+DLA+D SKNYD T
Sbjct: 123 YLNHSVDPNTCLHVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTT 182
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKES-KK 404
ADPKLQM KQTL +W PP A+G V VL GNKL+LNPIHAVVQLRPSM+HL ++S KK
Sbjct: 183 ADPKLQMQKQTLRSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKK 242
Query: 405 RTDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQ 584
+T+ ++ +D +KLE+ Q SG K +WVPLKYHS SDMAA Y++
Sbjct: 243 KTNARSNTKDSVKLEDPQP---SGAQTK-----------PDWVPLKYHSARSDMAATYVK 288
Query: 585 KMVAR--EGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEG 758
KM+AR EGS++ FSMS +DY+NSLCPGT S SS
Sbjct: 289 KMMAREVEGSQISFSMSSNDYINSLCPGTSSGSFSS----------------------NA 326
Query: 759 PPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLL 932
+HRFD LK+LAPD+SI GLW P++ LVYG G+ LAR+YVL
Sbjct: 327 NTVHRFDALKHLAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDHGLDVLARDYVLA 386
Query: 933 LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
LFSK+VII + QLP P L AMKDVL+ LA R DWKLK PD NF++ N ++VKK
Sbjct: 387 LFSKNVIITNSQLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMKFNQSIVKK 446
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 342 bits (877), Expect = 2e-91
Identities = 182/367 (49%), Positives = 232/367 (63%), Gaps = 12/367 (3%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
Y+ PSVDP TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVEVDL+ID D+KNYD
Sbjct: 118 YYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTKNYDPD 176
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L M KQTL+ SW PP A G VGVL GNKLHLNPIHAVVQLRPSM +L+ SK +
Sbjct: 177 IASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGK 236
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAP-----EPIKDSEEEWVPLKYHSMSSDMAA 572
+ + E+ EGK G+ KKQ E D EE W+PLKYH SD+++
Sbjct: 237 KNATSG-------EDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSS 289
Query: 573 GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
YLQ MVA E S + F+M+P DY++SLCPG +++ GP RR LL+ PL ER K L
Sbjct: 290 RYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFL 349
Query: 753 EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-----GDGIAALAR 917
EGPP+HRF L++L P+DSI GLWVP+TSL++ + + AR
Sbjct: 350 EGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAAR 409
Query: 918 NYVLLLFSKDVIIKDEQL--PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRL 1091
+Y+LLLFSK +++ +L P P ++K+ ++ A R KDWK KE D F+ L
Sbjct: 410 DYILLLFSKSLVVTPSELNVPMKPLILKSFLNI---FAVERPSFKDWKFKENVDTLFVEL 466
Query: 1092 NPAVVKK 1112
P +V+K
Sbjct: 467 YPDIVRK 473
>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X4 [Solanum tuberosum]
Length = 536
Score = 336 bits (862), Expect = 9e-90
Identities = 187/357 (52%), Positives = 229/357 (64%), Gaps = 5/357 (1%)
Frame = +3
Query: 57 PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D +
Sbjct: 104 PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163
Query: 237 KLQMDKQTLALSWKPPK--ANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
+ KQ L+ SW P A+G VGVL G+KLHLNP+HAVVQLRPS R+L E KK
Sbjct: 164 AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223
Query: 411 DVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPI-KDSEEEWVPLKYHSMSSDMAAGYLQK 587
ND E ++ E+ +E + G SKKQ P I KD E W+ LKYH SD++A YLQK
Sbjct: 224 TTNND-EKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQK 282
Query: 588 MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
M EGS V FSMSP DYLN+ PG D+ K LR L PL ER +TWLLEGPP+
Sbjct: 283 MAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPI 341
Query: 768 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 941
HRFD LK+LAPD+S GLWVP++SLVYG G+ LARN+VL F+
Sbjct: 342 HRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401
Query: 942 KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
K ++IK + P +KA L LA R L DWKLKE PD F L VV++
Sbjct: 402 KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 336 bits (862), Expect = 9e-90
Identities = 187/357 (52%), Positives = 229/357 (64%), Gaps = 5/357 (1%)
Frame = +3
Query: 57 PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D +
Sbjct: 104 PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163
Query: 237 KLQMDKQTLALSWKPPK--ANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
+ KQ L+ SW P A+G VGVL G+KLHLNP+HAVVQLRPS R+L E KK
Sbjct: 164 AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223
Query: 411 DVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPI-KDSEEEWVPLKYHSMSSDMAAGYLQK 587
ND E ++ E+ +E + G SKKQ P I KD E W+ LKYH SD++A YLQK
Sbjct: 224 TTNND-EKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQK 282
Query: 588 MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
M EGS V FSMSP DYLN+ PG D+ K LR L PL ER +TWLLEGPP+
Sbjct: 283 MAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPI 341
Query: 768 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 941
HRFD LK+LAPD+S GLWVP++SLVYG G+ LARN+VL F+
Sbjct: 342 HRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401
Query: 942 KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
K ++IK + P +KA L LA R L DWKLKE PD F L VV++
Sbjct: 402 KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 335 bits (858), Expect = 3e-89
Identities = 183/365 (50%), Positives = 227/365 (62%), Gaps = 10/365 (2%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F P +D TQLY+ QYPLRP WRPYELDERC+EVRVKP S+EVE+DL++DVDSKNYD
Sbjct: 117 FFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L M KQTL SW P+A VGVL GNKLHLN IHAV+QLRPS++HL SKK+
Sbjct: 177 CGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGSKKK 236
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPE--PIKD---SEEEWVPLKYHSMSSDMAA 572
+V D ED +KLEE K G SKKQ E +K EE WVPLKYH S+ +
Sbjct: 237 NNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESESSV 296
Query: 573 GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
YL+KM +E S + F+MSP DYLNSLCPG+ + KGP RR+LL+ PL ER K+ L
Sbjct: 297 RYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKSLLC 356
Query: 753 EG-PPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG----DGIAALAR 917
EG P+HRF LK+ APD + GLW P++SL+ G G +AR
Sbjct: 357 EGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQRIAR 416
Query: 918 NYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNP 1097
+YVLLLF K+ + L L A+ L+ L R +KDWK K D++FI+ P
Sbjct: 417 DYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIKNYP 476
Query: 1098 AVVKK 1112
VVKK
Sbjct: 477 DVVKK 481
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 331 bits (849), Expect = 3e-88
Identities = 175/356 (49%), Positives = 224/356 (62%), Gaps = 1/356 (0%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F PS+D TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVEVDL ID DS N+D
Sbjct: 124 FFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPA 182
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
K KQTL+ S+ PP+ G VGVL GNKLHLNPIHAVVQLRPS+ H+ +SK++
Sbjct: 183 QASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRK 242
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQK 587
+ E +KLE+ EGK G SKKQ W+ LKYH SD ++ YL+K
Sbjct: 243 NSATLNPE--VKLEDSNEGKPIGSSKKQC-----------WISLKYHGSKSDFSSRYLEK 289
Query: 588 MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
M+A+E S + F+M+P DY++SLCP + SKGP RR LL+ PL ER K +LEGPP+
Sbjct: 290 MIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPV 349
Query: 768 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYGDGIAALA-RNYVLLLFSK 944
RF LK+ APDDS+ GLW P++SL++ D + R+YVLLLFSK
Sbjct: 350 QRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSK 409
Query: 945 DVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
+++I Q+ + + +K L+ A R KDWK KE D FI+L P +VKK
Sbjct: 410 NLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKK 465
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 330 bits (845), Expect = 9e-88
Identities = 184/357 (51%), Positives = 228/357 (63%), Gaps = 5/357 (1%)
Frame = +3
Query: 57 PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
PS DP TQLY+FQYPL+ +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D +
Sbjct: 104 PSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163
Query: 237 KLQMDKQTLALSW--KPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
+ KQ L+ SW P +G VGVL G+KLHLNP+HAVVQLRPS R+L E KK
Sbjct: 164 AATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNI 223
Query: 411 DVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQK 587
ND E ++ E+ +E + G SKKQ K+P KD E W+ LKYH SD++A YLQK
Sbjct: 224 ITNND-EKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQK 282
Query: 588 MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
M EGS V FSMSP DYLN+ CPG D+ K LR L PL ER + WLLEGPP+
Sbjct: 283 MSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLK-ILRTRLSQLPLEERVRIWLLEGPPI 341
Query: 768 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 941
HRFD L +LAPD+S GLWVP++SLVYG G+ LARN+VL F+
Sbjct: 342 HRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401
Query: 942 KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
K ++IK + P +KA L LA R L DWKLKE PD F L VV++
Sbjct: 402 KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X2 [Solanum tuberosum]
Length = 657
Score = 325 bits (833), Expect = 2e-86
Identities = 182/356 (51%), Positives = 224/356 (62%), Gaps = 4/356 (1%)
Frame = +3
Query: 57 PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D +
Sbjct: 104 PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163
Query: 237 KLQMDKQTLALSWK--PPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
+ KQ L+ SW P A+G VGVL G+KLHLNP+HAVVQLRPS R+L E KK
Sbjct: 164 AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223
Query: 411 DVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQKM 590
ND E ++ E+ +E + G SKKQ W+ LKYH SD++A YLQKM
Sbjct: 224 TTNND-EKSVENEDVKEKRPMGPSKKQ-----------HWLHLKYHGARSDISARYLQKM 271
Query: 591 VAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLH 770
EGS V FSMSP DYLN+ PG D+ K LR L PL ER +TWLLEGPP+H
Sbjct: 272 AMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPIH 330
Query: 771 RFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFSK 944
RFD LK+LAPD+S GLWVP++SLVYG G+ LARN+VL F+K
Sbjct: 331 RFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTK 390
Query: 945 DVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
++IK + P +KA L LA R L DWKLKE PD F L VV++
Sbjct: 391 GILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 446
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 320 bits (819), Expect = 9e-85
Identities = 183/370 (49%), Positives = 227/370 (61%), Gaps = 15/370 (4%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
YF PS+DP TQLY+ Q P+RP+WRPYEL+ERC+EVR++PT+A++EVDLAID DSKN+D
Sbjct: 103 YFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRD 162
Query: 228 ADPKLQMDKQTLALSW--KPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESK 401
+ +M+KQT++ SW P +G VGVL G+KLHLNPIH VVQLRPS +HL E K
Sbjct: 163 SIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKESELK 222
Query: 402 KRTDVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGY 578
K ND E ++ EE +E K SKKQ K P KD EE WV LKYH S+++A Y
Sbjct: 223 KNIATSND-EKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEISARY 281
Query: 579 LQKMVAREGSEVHFSMS----------PDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLN 728
LQ+M EGS + FSMS DYL +LCPG D+ K LR + PL+
Sbjct: 282 LQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYK-DLRIRVSQLPLD 340
Query: 729 ERFKTWLLEGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGI 902
ERF+TWL EGPP+HRF LK+LA D+ + GLWVP++SLVYG DG
Sbjct: 341 ERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRNDGH 400
Query: 903 AALARNYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNF 1082
LAR++VL FSK IK + P KA L LA R L DWKLKE PD F
Sbjct: 401 EVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPDKEF 460
Query: 1083 IRLNPAVVKK 1112
L +VK+
Sbjct: 461 ENLYGDLVKE 470
>gb|ABU45189.1| unknown [Capsicum frutescens]
Length = 629
Score = 320 bits (819), Expect = 9e-85
Identities = 179/369 (48%), Positives = 226/369 (61%), Gaps = 14/369 (3%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
++ PS DP ++LY FQYPLR +WRPYEL+ERCQEVR++ ++ E+EVDLAID DS N+D
Sbjct: 118 WYTPSFDPVSKLYAFQYPLRAVWRPYELEERCQEVRLRASTEEMEVDLAIDFDSNNFDRD 177
Query: 228 ADPKLQMDKQTLALSWKPPKA--NGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESK 401
+ M KQTL+ SW P +G VG+L G+KLHLNP+HAVVQLRP+ +HL E K
Sbjct: 178 SVHAATMKKQTLSTSWMPLPTCTSGYAVGILIGDKLHLNPVHAVVQLRPARQHLKESELK 237
Query: 402 KRTDVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGY 578
K ND E ++ E+ +E K SK Q K P KD ++W+ LKYH SD++A
Sbjct: 238 KNNTTSND-EKSVENEDVKEKKPVAPSKMQNKPPGNYKDVGKDWLHLKYHGARSDISARC 296
Query: 579 LQKMVAREGSEVHFSMSPD---------DYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNE 731
LQKM EGS+V FSMSP DYLN+LCPG D+ K LR L PL +
Sbjct: 297 LQKMAMEEGSQVPFSMSPSFSANLIHRVDYLNALCPGRPADTDKYKN-LRTRLSQLPLED 355
Query: 732 RFKTWLLEGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIA 905
R KTWLLEGPP+HRFD LK+LAPD ++ GLWVP++SLVYG GI
Sbjct: 356 RVKTWLLEGPPIHRFDALKHLAPDTTVDEILRVLQLSAQLVQGLWVPKSSLVYGKNSGID 415
Query: 906 ALARNYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFI 1085
LAR++VL F+K +IK + P +KA L LA R L DWKLKE PD F
Sbjct: 416 VLARDFVLYQFTKSTLIKKSAFGRRPEFIKAATQSLKSLAIERPDLNDWKLKEHPDKKFE 475
Query: 1086 RLNPAVVKK 1112
L VV++
Sbjct: 476 NLYGDVVRE 484
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 308 bits (790), Expect = 2e-81
Identities = 163/362 (45%), Positives = 232/362 (64%), Gaps = 7/362 (1%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
YF+PS+D +T+LY+ QYPLRP WRPY+LDE+C+EVR+KP ++EVEVDL+ID++S N +
Sbjct: 115 YFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSIDLESYNVEKA 174
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
KL+ KQTL+ +WKPP ANGC VG+L G+KLHL+PIHAVVQLRPS +L S+K+
Sbjct: 175 TADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRHYLDSGGSEKK 234
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQK 587
++ ++ ++ S +QK+ DS + WVPL+YH SD+++ Y Q+
Sbjct: 235 NVATSNNQNKQTTPSMEQKSDGAPSIEQKS-----DSNQCWVPLEYHGCKSDISSRYFQQ 289
Query: 588 MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
MV E S ++F MS DY+ +LCPG ++L +KGP +R LL+ P+ +R +T L+EGPPL
Sbjct: 290 MVTHESSPINFEMSTYDYIATLCPGVSSNTL-AKGPSKRYLLSLPVEKRLQTLLIEGPPL 348
Query: 768 HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLLLFSK 944
HRF +K+ AP+ S G WVPR+SL++ GI +LARNY+L+ F K
Sbjct: 349 HRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPTGGIESLARNYILVRFHK 408
Query: 945 DVIIKDEQLPK--SPPLVKAMKDVLHGLATYRNKLKD----WKLKELPDLNFIRLNPAVV 1106
+ +K ++L + L MK + A + LK WK KELPD +FI+ P VV
Sbjct: 409 SLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYWKFKELPDESFIKEFPIVV 468
Query: 1107 KK 1112
KK
Sbjct: 469 KK 470
>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Fragaria vesca subsp. vesca]
Length = 685
Score = 301 bits (771), Expect = 3e-79
Identities = 169/364 (46%), Positives = 218/364 (59%), Gaps = 12/364 (3%)
Frame = +3
Query: 48 YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
+F P+VD TQLY+ QYPLRP WRPYEL++RC+E+RVKP +AEVEVDL+ID+ SKN D
Sbjct: 116 FFNPNVDSNTQLYVLQYPLRPRWRPYELEDRCEEIRVKPGTAEVEVDLSIDLYSKNCDQE 175
Query: 228 ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
+L+M KQTLA W P ++ G VGVL GNKLHLNP+HAVVQLRPS+ HL SK++
Sbjct: 176 FANRLKMTKQTLATEWDPCRSTGYAVGVLMGNKLHLNPVHAVVQLRPSLDHLKPGGSKRK 235
Query: 408 TDVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQ 584
D E +K EE K SKKQ K E + EE WVPL+YH SD +AGYL+
Sbjct: 236 GTATGDAEVAVKREE----KSLAPSKKQNKRVESSTEDEESWVPLQYHGSESDFSAGYLK 291
Query: 585 KMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPP 764
+MV ++ S + F+M+P DY+NSLCP T KG +R+LL PL ER + L+E P
Sbjct: 292 RMVVQDSSPLEFTMTPYDYVNSLCPRT------CKGSSKRALLNLPLEERIQKLLVEEPI 345
Query: 765 LHRF-DTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY----------GDGIAAL 911
RF D KY AP + GLWVP+T+L+Y D
Sbjct: 346 ARRFSDLKKYYAPRNQEKELLDVLQKNGLLLRGLWVPKTALLYPKKEGSSRKKDDDNLRT 405
Query: 912 ARNYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRL 1091
ARN++L F K+ +I +L PPL + L LA YR +DWKLKE D++F L
Sbjct: 406 ARNHILNSFQKNPVISYSELNVYPPLKPHFDETLKFLAVYRPSTRDWKLKEQSDVSFAEL 465
Query: 1092 NPAV 1103
+P +
Sbjct: 466 HPDI 469