BLASTX nr result

ID: Mentha26_contig00002361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00002361
         (1112 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       396   e-108
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              363   9e-98
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   357   5e-96
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   353   6e-95
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p...   353   6e-95
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   353   6e-95
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   348   2e-93
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   348   2e-93
gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Mimulus...   345   3e-92
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   342   2e-91
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s...   336   9e-90
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   336   9e-90
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor...   335   3e-89
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   331   3e-88
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   330   9e-88
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   325   2e-86
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          320   9e-85
gb|ABU45189.1| unknown [Capsicum frutescens]                          320   9e-85
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...   308   2e-81
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s...   301   3e-79

>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  396 bits (1018), Expect = e-108
 Identities = 202/362 (55%), Positives = 254/362 (70%), Gaps = 7/362 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            Y  PS+DP T+LY+ QYPLRPLWRPYELD+RC+EVRVK  SAEVEVDLA+DVDSKNYD+ 
Sbjct: 114  YLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSD 173

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
            ADP++ M KQTL  SWKPP   G  VGVL GNKLHLNPIHAVVQLRPSM+H   + SK+R
Sbjct: 174  ADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRR 233

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAP-----EPIKDSEEEWVPLKYHSMSSDMAA 572
            T   +++ED  K EE      +G  KKQ  P     E  KD+ E+W+PL YH   SD++ 
Sbjct: 234  TTASSNLEDNTKGEEVT----TGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISM 289

Query: 573  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
             Y++KMV  + S + FSM+  DY+N+LCPGT  ++  S GP  R LL+ PL ERF+TWLL
Sbjct: 290  SYVRKMVEHDSSHIQFSMN-HDYVNTLCPGTSNENNGSNGP-SRVLLSLPLEERFRTWLL 347

Query: 753  EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYV 926
            +GPP+HRFD LK+LAPD S+               GLW+P++SL+YG   GI ALAR+YV
Sbjct: 348  QGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYV 407

Query: 927  LLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
            LLLFS+  II + QLP+   L +AM+DVL  +A  R  L DWK KE PD+ FI+LNP +V
Sbjct: 408  LLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIV 467

Query: 1107 KK 1112
            ++
Sbjct: 468  RE 469


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  363 bits (931), Expect = 9e-98
 Identities = 191/360 (53%), Positives = 236/360 (65%), Gaps = 8/360 (2%)
 Frame = +3

Query: 57   PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
            P  D  T++Y+ QYPLRP WRPYEL ERC EVRVKP SAEVEVDL+IDVDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 237  KLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRTDV 416
              +M KQTL+ SWKPP+  G  VGVL GNKLHLNPIHAVVQLRPSM +L+   +K++ +V
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 417  GNDVEDVMKLEEQQEGKHSGMSKKQK-----APEPIKDSEEEWVPLKYHSMSSDMAAGYL 581
              D    +KLE   E +  G  KKQ        E   D+ E WVPLKYHS  SD +A YL
Sbjct: 233  TGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYL 292

Query: 582  QKMVAREGSEVHFSMSPDDYLNSLC-PGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEG 758
            QKMVA + S + F MSP +Y+NSLC PG   D   SKG  RR LL+ PL ERFKT L EG
Sbjct: 293  QKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEG 352

Query: 759  PPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLL 932
            PP+HRF  LK+ APD+S+               GLWVP++SL++  G G+A LAR+Y+LL
Sbjct: 353  PPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILL 412

Query: 933  LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
            LFSK  +I   Q+     L KA+K  L  LA  R   +DWK KE  D++F++L+P +V++
Sbjct: 413  LFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVRE 472


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  357 bits (916), Expect = 5e-96
 Identities = 188/355 (52%), Positives = 232/355 (65%), Gaps = 3/355 (0%)
 Frame = +3

Query: 57   PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
            P  D  T++Y+ QYPLRP WRPYEL ERC EVRVKP SAEVEVDL+IDVDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 237  KLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRTDV 416
              +M KQTL+ SWKPP+  G  VGVL GNKLHLNPIHAVVQLRPSM +L+   +K++ +V
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 417  GNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQKMVA 596
              D    +KLE   E +  G  KKQ            WVPLKYHS  SD +A YLQKMVA
Sbjct: 233  TGDTNSAVKLEVSNEEESVGSLKKQ-----------SWVPLKYHSSESDFSARYLQKMVA 281

Query: 597  REGSEVHFSMSPDDYLNSLC-PGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLHR 773
             + S + F MSP +Y+NSLC PG   D   SKG  RR LL+ PL ERFKT L EGPP+HR
Sbjct: 282  EDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHR 341

Query: 774  FDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY--GDGIAALARNYVLLLFSKD 947
            F  LK+ APD+S+               GLWVP++SL++  G G+A LAR+Y+LLLFSK 
Sbjct: 342  FSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKG 401

Query: 948  VIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
             +I   Q+     L KA+K  L  LA  R   +DWK KE  D++F++L+P +V++
Sbjct: 402  PLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVRE 456


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  353 bits (907), Expect = 6e-95
 Identities = 190/361 (52%), Positives = 236/361 (65%), Gaps = 7/361 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DVDS NYD+ 
Sbjct: 128  FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L+M KQTL+ SW PP+  G  VGVL G+KLHLNPIHAVVQLRPSM HL    SK++
Sbjct: 188  RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKK-----QKAPEPIKDSEEEWVPLKYHSMSSDMAA 572
                 D E  +K+EE  +GK +G S K     Q + E   D +E WVPLKYHS  +D +A
Sbjct: 248  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307

Query: 573  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
             YLQ+M+A E   + F+MSP DY++SLCPG   ++  ++GP RR LL+ PL ER K  L 
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 753  EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 929
            EGPP HRF  LK+ APD SI               GLWVP++SL++  D   +LAR+YVL
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426

Query: 930  LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
            LLFSK+ II   Q+   SP   + +K  L  LA  R   KDWKLKE  D  F +L P +V
Sbjct: 427  LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486

Query: 1107 K 1109
            K
Sbjct: 487  K 487


>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao] gi|508699253|gb|EOX91149.1|
            Transcription regulators,zinc ion binding, putative
            isoform 2 [Theobroma cacao]
          Length = 588

 Score =  353 bits (907), Expect = 6e-95
 Identities = 190/361 (52%), Positives = 236/361 (65%), Gaps = 7/361 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DVDS NYD+ 
Sbjct: 31   FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 90

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L+M KQTL+ SW PP+  G  VGVL G+KLHLNPIHAVVQLRPSM HL    SK++
Sbjct: 91   RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 150

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKK-----QKAPEPIKDSEEEWVPLKYHSMSSDMAA 572
                 D E  +K+EE  +GK +G S K     Q + E   D +E WVPLKYHS  +D +A
Sbjct: 151  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 210

Query: 573  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
             YLQ+M+A E   + F+MSP DY++SLCPG   ++  ++GP RR LL+ PL ER K  L 
Sbjct: 211  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 269

Query: 753  EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 929
            EGPP HRF  LK+ APD SI               GLWVP++SL++  D   +LAR+YVL
Sbjct: 270  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 329

Query: 930  LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
            LLFSK+ II   Q+   SP   + +K  L  LA  R   KDWKLKE  D  F +L P +V
Sbjct: 330  LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 389

Query: 1107 K 1109
            K
Sbjct: 390  K 390


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  353 bits (907), Expect = 6e-95
 Identities = 190/361 (52%), Positives = 236/361 (65%), Gaps = 7/361 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVE+DLA+DVDS NYD+ 
Sbjct: 128  FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L+M KQTL+ SW PP+  G  VGVL G+KLHLNPIHAVVQLRPSM HL    SK++
Sbjct: 188  RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKK-----QKAPEPIKDSEEEWVPLKYHSMSSDMAA 572
                 D E  +K+EE  +GK +G S K     Q + E   D +E WVPLKYHS  +D +A
Sbjct: 248  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307

Query: 573  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
             YLQ+M+A E   + F+MSP DY++SLCPG   ++  ++GP RR LL+ PL ER K  L 
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 753  EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVL 929
            EGPP HRF  LK+ APD SI               GLWVP++SL++  D   +LAR+YVL
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426

Query: 930  LLFSKDVIIKDEQL-PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVV 1106
            LLFSK+ II   Q+   SP   + +K  L  LA  R   KDWKLKE  D  F +L P +V
Sbjct: 427  LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486

Query: 1107 K 1109
            K
Sbjct: 487  K 487


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  348 bits (894), Expect = 2e-93
 Identities = 178/360 (49%), Positives = 241/360 (66%), Gaps = 5/360 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F PS+D +++LY+ QYPLRPLWRPYELDERC+EVRVKP+++EVE+DL+IDVDS N+D+ 
Sbjct: 120  FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L M KQTL+ +W PP+A G  +GVL GNKLHLNPIHAVVQLR SM  L    SK++
Sbjct: 180  KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQK----APEPIKDSEEEWVPLKYHSMSSDMAAG 575
             +V +++   +KLE+  + K  G SKKQ     + E   + EE WVPLKYH   SD +A 
Sbjct: 240  NNVASEIP--VKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSAR 297

Query: 576  YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 755
            YLQ+M+  E S +HF+M+P DY++SLCPG   ++  SKGP RR LL+ PL ERFK  L E
Sbjct: 298  YLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCE 357

Query: 756  GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLL 932
            G P+ RF TL + AP+D++               GLW PR+ L++  D +  LAR+YVLL
Sbjct: 358  GEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLL 417

Query: 933  LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
             FSK+ ++K + L  SP L   +K  L+  A  R   KDWK ++  DL+FI+ +P +V K
Sbjct: 418  SFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIK 477


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|557527706|gb|ESR38956.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  348 bits (894), Expect = 2e-93
 Identities = 178/360 (49%), Positives = 241/360 (66%), Gaps = 5/360 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F PS+D +++LY+ QYPLRPLWRPYELDERC+EVRVKP+++EVE+DL+IDVDS N+D+ 
Sbjct: 120  FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L M KQTL+ +W PP+A G  +GVL GNKLHLNPIHAVVQLR SM  L    SK++
Sbjct: 180  KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQK----APEPIKDSEEEWVPLKYHSMSSDMAAG 575
             +V +++   +KLE+  + K  G SKKQ     + E   + EE WVPLKYH   SD +A 
Sbjct: 240  NNVASEIP--VKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSAR 297

Query: 576  YLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLE 755
            YLQ+M+  E S +HF+M+P DY++SLCPG   ++  SKGP RR LL+ PL ERFK  L E
Sbjct: 298  YLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCE 357

Query: 756  GPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLL 932
            G P+ RF TL + AP+D++               GLW PR+ L++  D +  LAR+YVLL
Sbjct: 358  GEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLL 417

Query: 933  LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
             FSK+ ++K + L  SP L   +K  L+  A  R   KDWK ++  DL+FI+ +P +V K
Sbjct: 418  SFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIK 477


>gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Mimulus guttatus]
          Length = 525

 Score =  345 bits (884), Expect = 3e-92
 Identities = 190/360 (52%), Positives = 232/360 (64%), Gaps = 5/360 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            Y   SVDP T L+++QYPLRPLWRPYELDE+C EVRVKP+   VE+DLA+D  SKNYD T
Sbjct: 123  YLNHSVDPNTCLHVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTT 182

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKES-KK 404
            ADPKLQM KQTL  +W PP A+G  V VL GNKL+LNPIHAVVQLRPSM+HL  ++S KK
Sbjct: 183  ADPKLQMQKQTLRSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKK 242

Query: 405  RTDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQ 584
            +T+  ++ +D +KLE+ Q    SG   K            +WVPLKYHS  SDMAA Y++
Sbjct: 243  KTNARSNTKDSVKLEDPQP---SGAQTK-----------PDWVPLKYHSARSDMAATYVK 288

Query: 585  KMVAR--EGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEG 758
            KM+AR  EGS++ FSMS +DY+NSLCPGT   S SS                        
Sbjct: 289  KMMAREVEGSQISFSMSSNDYINSLCPGTSSGSFSS----------------------NA 326

Query: 759  PPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLL 932
              +HRFD LK+LAPD+SI               GLW P++ LVYG   G+  LAR+YVL 
Sbjct: 327  NTVHRFDALKHLAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDHGLDVLARDYVLA 386

Query: 933  LFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
            LFSK+VII + QLP  P L  AMKDVL+ LA  R    DWKLK  PD NF++ N ++VKK
Sbjct: 387  LFSKNVIITNSQLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMKFNQSIVKK 446


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  342 bits (877), Expect = 2e-91
 Identities = 182/367 (49%), Positives = 232/367 (63%), Gaps = 12/367 (3%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            Y+ PSVDP TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVEVDL+ID D+KNYD  
Sbjct: 118  YYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTKNYDPD 176

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L M KQTL+ SW PP A G  VGVL GNKLHLNPIHAVVQLRPSM +L+   SK +
Sbjct: 177  IASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGK 236

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAP-----EPIKDSEEEWVPLKYHSMSSDMAA 572
             +  +        E+  EGK  G+ KKQ        E   D EE W+PLKYH   SD+++
Sbjct: 237  KNATSG-------EDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSS 289

Query: 573  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
             YLQ MVA E S + F+M+P DY++SLCPG   +++   GP RR LL+ PL ER K   L
Sbjct: 290  RYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFL 349

Query: 753  EGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-----GDGIAALAR 917
            EGPP+HRF  L++L P+DSI               GLWVP+TSL++      + +   AR
Sbjct: 350  EGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAAR 409

Query: 918  NYVLLLFSKDVIIKDEQL--PKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRL 1091
            +Y+LLLFSK +++   +L  P  P ++K+  ++    A  R   KDWK KE  D  F+ L
Sbjct: 410  DYILLLFSKSLVVTPSELNVPMKPLILKSFLNI---FAVERPSFKDWKFKENVDTLFVEL 466

Query: 1092 NPAVVKK 1112
             P +V+K
Sbjct: 467  YPDIVRK 473


>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X4 [Solanum tuberosum]
          Length = 536

 Score =  336 bits (862), Expect = 9e-90
 Identities = 187/357 (52%), Positives = 229/357 (64%), Gaps = 5/357 (1%)
 Frame = +3

Query: 57   PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
            PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D  +  
Sbjct: 104  PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163

Query: 237  KLQMDKQTLALSWKPPK--ANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
               + KQ L+ SW P    A+G  VGVL G+KLHLNP+HAVVQLRPS R+L   E KK  
Sbjct: 164  AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223

Query: 411  DVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPI-KDSEEEWVPLKYHSMSSDMAAGYLQK 587
               ND E  ++ E+ +E +  G SKKQ  P  I KD  E W+ LKYH   SD++A YLQK
Sbjct: 224  TTNND-EKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQK 282

Query: 588  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
            M   EGS V FSMSP DYLN+  PG   D+   K  LR  L   PL ER +TWLLEGPP+
Sbjct: 283  MAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPI 341

Query: 768  HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 941
            HRFD LK+LAPD+S                GLWVP++SLVYG   G+  LARN+VL  F+
Sbjct: 342  HRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401

Query: 942  KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
            K ++IK     + P  +KA    L  LA  R  L DWKLKE PD  F  L   VV++
Sbjct: 402  KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  336 bits (862), Expect = 9e-90
 Identities = 187/357 (52%), Positives = 229/357 (64%), Gaps = 5/357 (1%)
 Frame = +3

Query: 57   PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
            PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D  +  
Sbjct: 104  PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163

Query: 237  KLQMDKQTLALSWKPPK--ANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
               + KQ L+ SW P    A+G  VGVL G+KLHLNP+HAVVQLRPS R+L   E KK  
Sbjct: 164  AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223

Query: 411  DVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPI-KDSEEEWVPLKYHSMSSDMAAGYLQK 587
               ND E  ++ E+ +E +  G SKKQ  P  I KD  E W+ LKYH   SD++A YLQK
Sbjct: 224  TTNND-EKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQK 282

Query: 588  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
            M   EGS V FSMSP DYLN+  PG   D+   K  LR  L   PL ER +TWLLEGPP+
Sbjct: 283  MAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPI 341

Query: 768  HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 941
            HRFD LK+LAPD+S                GLWVP++SLVYG   G+  LARN+VL  F+
Sbjct: 342  HRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401

Query: 942  KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
            K ++IK     + P  +KA    L  LA  R  L DWKLKE PD  F  L   VV++
Sbjct: 402  KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458


>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  335 bits (858), Expect = 3e-89
 Identities = 183/365 (50%), Positives = 227/365 (62%), Gaps = 10/365 (2%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F P +D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S+EVE+DL++DVDSKNYD  
Sbjct: 117  FFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L M KQTL  SW  P+A    VGVL GNKLHLN IHAV+QLRPS++HL    SKK+
Sbjct: 177  CGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGSKKK 236

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPE--PIKD---SEEEWVPLKYHSMSSDMAA 572
             +V  D ED +KLEE    K  G SKKQ   E   +K     EE WVPLKYH   S+ + 
Sbjct: 237  NNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESESSV 296

Query: 573  GYLQKMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLL 752
             YL+KM  +E S + F+MSP DYLNSLCPG+  +    KGP RR+LL+ PL ER K+ L 
Sbjct: 297  RYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKSLLC 356

Query: 753  EG-PPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG----DGIAALAR 917
            EG  P+HRF  LK+ APD +                GLW P++SL+ G     G   +AR
Sbjct: 357  EGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQRIAR 416

Query: 918  NYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNP 1097
            +YVLLLF K+ +     L     L  A+   L+ L   R  +KDWK K   D++FI+  P
Sbjct: 417  DYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIKNYP 476

Query: 1098 AVVKK 1112
             VVKK
Sbjct: 477  DVVKK 481


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  331 bits (849), Expect = 3e-88
 Identities = 175/356 (49%), Positives = 224/356 (62%), Gaps = 1/356 (0%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F PS+D  TQLY+ QYPLRP WRPYELDERC+EVRVKP S EVEVDL ID DS N+D  
Sbjct: 124  FFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPA 182

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               K    KQTL+ S+ PP+  G  VGVL GNKLHLNPIHAVVQLRPS+ H+   +SK++
Sbjct: 183  QASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRK 242

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQK 587
                 + E  +KLE+  EGK  G SKKQ            W+ LKYH   SD ++ YL+K
Sbjct: 243  NSATLNPE--VKLEDSNEGKPIGSSKKQC-----------WISLKYHGSKSDFSSRYLEK 289

Query: 588  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
            M+A+E S + F+M+P DY++SLCP    +   SKGP RR LL+ PL ER K  +LEGPP+
Sbjct: 290  MIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPV 349

Query: 768  HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYGDGIAALA-RNYVLLLFSK 944
             RF  LK+ APDDS+               GLW P++SL++ D  +    R+YVLLLFSK
Sbjct: 350  QRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSK 409

Query: 945  DVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
            +++I   Q+     + + +K  L+  A  R   KDWK KE  D  FI+L P +VKK
Sbjct: 410  NLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKK 465


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  330 bits (845), Expect = 9e-88
 Identities = 184/357 (51%), Positives = 228/357 (63%), Gaps = 5/357 (1%)
 Frame = +3

Query: 57   PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
            PS DP TQLY+FQYPL+ +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D  +  
Sbjct: 104  PSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163

Query: 237  KLQMDKQTLALSW--KPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
               + KQ L+ SW   P   +G  VGVL G+KLHLNP+HAVVQLRPS R+L   E KK  
Sbjct: 164  AATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNI 223

Query: 411  DVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQK 587
               ND E  ++ E+ +E +  G SKKQ K+P   KD  E W+ LKYH   SD++A YLQK
Sbjct: 224  ITNND-EKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQK 282

Query: 588  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
            M   EGS V FSMSP DYLN+ CPG   D+   K  LR  L   PL ER + WLLEGPP+
Sbjct: 283  MSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLK-ILRTRLSQLPLEERVRIWLLEGPPI 341

Query: 768  HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFS 941
            HRFD L +LAPD+S                GLWVP++SLVYG   G+  LARN+VL  F+
Sbjct: 342  HRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFT 401

Query: 942  KDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
            K ++IK     + P  +KA    L  LA  R  L DWKLKE PD  F  L   VV++
Sbjct: 402  KGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  325 bits (833), Expect = 2e-86
 Identities = 182/356 (51%), Positives = 224/356 (62%), Gaps = 4/356 (1%)
 Frame = +3

Query: 57   PSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDATADP 236
            PS DP TQLY+FQYPLR +WRPYEL+ERCQEVR++P++AE+EVDLAID+DSKN+D  +  
Sbjct: 104  PSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163

Query: 237  KLQMDKQTLALSWK--PPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKRT 410
               + KQ L+ SW   P  A+G  VGVL G+KLHLNP+HAVVQLRPS R+L   E KK  
Sbjct: 164  AATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNV 223

Query: 411  DVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQKM 590
               ND E  ++ E+ +E +  G SKKQ            W+ LKYH   SD++A YLQKM
Sbjct: 224  TTNND-EKSVENEDVKEKRPMGPSKKQ-----------HWLHLKYHGARSDISARYLQKM 271

Query: 591  VAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPLH 770
               EGS V FSMSP DYLN+  PG   D+   K  LR  L   PL ER +TWLLEGPP+H
Sbjct: 272  AMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPIH 330

Query: 771  RFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIAALARNYVLLLFSK 944
            RFD LK+LAPD+S                GLWVP++SLVYG   G+  LARN+VL  F+K
Sbjct: 331  RFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTK 390

Query: 945  DVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRLNPAVVKK 1112
             ++IK     + P  +KA    L  LA  R  L DWKLKE PD  F  L   VV++
Sbjct: 391  GILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 446


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  320 bits (819), Expect = 9e-85
 Identities = 183/370 (49%), Positives = 227/370 (61%), Gaps = 15/370 (4%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            YF PS+DP TQLY+ Q P+RP+WRPYEL+ERC+EVR++PT+A++EVDLAID DSKN+D  
Sbjct: 103  YFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRD 162

Query: 228  ADPKLQMDKQTLALSW--KPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESK 401
            +    +M+KQT++ SW   P   +G  VGVL G+KLHLNPIH VVQLRPS +HL   E K
Sbjct: 163  SIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKESELK 222

Query: 402  KRTDVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGY 578
            K     ND E  ++ EE +E K    SKKQ K P   KD EE WV LKYH   S+++A Y
Sbjct: 223  KNIATSND-EKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEISARY 281

Query: 579  LQKMVAREGSEVHFSMS----------PDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLN 728
            LQ+M   EGS + FSMS            DYL +LCPG   D+   K  LR  +   PL+
Sbjct: 282  LQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYK-DLRIRVSQLPLD 340

Query: 729  ERFKTWLLEGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGI 902
            ERF+TWL EGPP+HRF  LK+LA D+ +               GLWVP++SLVYG  DG 
Sbjct: 341  ERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRNDGH 400

Query: 903  AALARNYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNF 1082
              LAR++VL  FSK   IK     + P   KA    L  LA  R  L DWKLKE PD  F
Sbjct: 401  EVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPDKEF 460

Query: 1083 IRLNPAVVKK 1112
              L   +VK+
Sbjct: 461  ENLYGDLVKE 470


>gb|ABU45189.1| unknown [Capsicum frutescens]
          Length = 629

 Score =  320 bits (819), Expect = 9e-85
 Identities = 179/369 (48%), Positives = 226/369 (61%), Gaps = 14/369 (3%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            ++ PS DP ++LY FQYPLR +WRPYEL+ERCQEVR++ ++ E+EVDLAID DS N+D  
Sbjct: 118  WYTPSFDPVSKLYAFQYPLRAVWRPYELEERCQEVRLRASTEEMEVDLAIDFDSNNFDRD 177

Query: 228  ADPKLQMDKQTLALSWKPPKA--NGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESK 401
            +     M KQTL+ SW P     +G  VG+L G+KLHLNP+HAVVQLRP+ +HL   E K
Sbjct: 178  SVHAATMKKQTLSTSWMPLPTCTSGYAVGILIGDKLHLNPVHAVVQLRPARQHLKESELK 237

Query: 402  KRTDVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGY 578
            K     ND E  ++ E+ +E K    SK Q K P   KD  ++W+ LKYH   SD++A  
Sbjct: 238  KNNTTSND-EKSVENEDVKEKKPVAPSKMQNKPPGNYKDVGKDWLHLKYHGARSDISARC 296

Query: 579  LQKMVAREGSEVHFSMSPD---------DYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNE 731
            LQKM   EGS+V FSMSP          DYLN+LCPG   D+   K  LR  L   PL +
Sbjct: 297  LQKMAMEEGSQVPFSMSPSFSANLIHRVDYLNALCPGRPADTDKYKN-LRTRLSQLPLED 355

Query: 732  RFKTWLLEGPPLHRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVYG--DGIA 905
            R KTWLLEGPP+HRFD LK+LAPD ++               GLWVP++SLVYG   GI 
Sbjct: 356  RVKTWLLEGPPIHRFDALKHLAPDTTVDEILRVLQLSAQLVQGLWVPKSSLVYGKNSGID 415

Query: 906  ALARNYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFI 1085
             LAR++VL  F+K  +IK     + P  +KA    L  LA  R  L DWKLKE PD  F 
Sbjct: 416  VLARDFVLYQFTKSTLIKKSAFGRRPEFIKAATQSLKSLAIERPDLNDWKLKEHPDKKFE 475

Query: 1086 RLNPAVVKK 1112
             L   VV++
Sbjct: 476  NLYGDVVRE 484


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
            gi|358344405|ref|XP_003636280.1| DNA-directed RNA
            polymerase III subunit RPC5 [Medicago truncatula]
            gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
            gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
          Length = 683

 Score =  308 bits (790), Expect = 2e-81
 Identities = 163/362 (45%), Positives = 232/362 (64%), Gaps = 7/362 (1%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            YF+PS+D +T+LY+ QYPLRP WRPY+LDE+C+EVR+KP ++EVEVDL+ID++S N +  
Sbjct: 115  YFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSIDLESYNVEKA 174

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               KL+  KQTL+ +WKPP ANGC VG+L G+KLHL+PIHAVVQLRPS  +L    S+K+
Sbjct: 175  TADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRHYLDSGGSEKK 234

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQKAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQK 587
                ++ ++       ++      S +QK+     DS + WVPL+YH   SD+++ Y Q+
Sbjct: 235  NVATSNNQNKQTTPSMEQKSDGAPSIEQKS-----DSNQCWVPLEYHGCKSDISSRYFQQ 289

Query: 588  MVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPPL 767
            MV  E S ++F MS  DY+ +LCPG   ++L +KGP +R LL+ P+ +R +T L+EGPPL
Sbjct: 290  MVTHESSPINFEMSTYDYIATLCPGVSSNTL-AKGPSKRYLLSLPVEKRLQTLLIEGPPL 348

Query: 768  HRFDTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY-GDGIAALARNYVLLLFSK 944
            HRF  +K+ AP+ S                G WVPR+SL++   GI +LARNY+L+ F K
Sbjct: 349  HRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPTGGIESLARNYILVRFHK 408

Query: 945  DVIIKDEQLPK--SPPLVKAMKDVLHGLATYRNKLKD----WKLKELPDLNFIRLNPAVV 1106
             + +K ++L +     L   MK  +   A  +  LK     WK KELPD +FI+  P VV
Sbjct: 409  SLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYWKFKELPDESFIKEFPIVV 468

Query: 1107 KK 1112
            KK
Sbjct: 469  KK 470


>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Fragaria vesca subsp. vesca]
          Length = 685

 Score =  301 bits (771), Expect = 3e-79
 Identities = 169/364 (46%), Positives = 218/364 (59%), Gaps = 12/364 (3%)
 Frame = +3

Query: 48   YFAPSVDPETQLYLFQYPLRPLWRPYELDERCQEVRVKPTSAEVEVDLAIDVDSKNYDAT 227
            +F P+VD  TQLY+ QYPLRP WRPYEL++RC+E+RVKP +AEVEVDL+ID+ SKN D  
Sbjct: 116  FFNPNVDSNTQLYVLQYPLRPRWRPYELEDRCEEIRVKPGTAEVEVDLSIDLYSKNCDQE 175

Query: 228  ADPKLQMDKQTLALSWKPPKANGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLALKESKKR 407
               +L+M KQTLA  W P ++ G  VGVL GNKLHLNP+HAVVQLRPS+ HL    SK++
Sbjct: 176  FANRLKMTKQTLATEWDPCRSTGYAVGVLMGNKLHLNPVHAVVQLRPSLDHLKPGGSKRK 235

Query: 408  TDVGNDVEDVMKLEEQQEGKHSGMSKKQ-KAPEPIKDSEEEWVPLKYHSMSSDMAAGYLQ 584
                 D E  +K EE    K    SKKQ K  E   + EE WVPL+YH   SD +AGYL+
Sbjct: 236  GTATGDAEVAVKREE----KSLAPSKKQNKRVESSTEDEESWVPLQYHGSESDFSAGYLK 291

Query: 585  KMVAREGSEVHFSMSPDDYLNSLCPGTFGDSLSSKGPLRRSLLAKPLNERFKTWLLEGPP 764
            +MV ++ S + F+M+P DY+NSLCP T       KG  +R+LL  PL ER +  L+E P 
Sbjct: 292  RMVVQDSSPLEFTMTPYDYVNSLCPRT------CKGSSKRALLNLPLEERIQKLLVEEPI 345

Query: 765  LHRF-DTLKYLAPDDSIXXXXXXXXXXXXXXXGLWVPRTSLVY----------GDGIAAL 911
              RF D  KY AP +                 GLWVP+T+L+Y           D     
Sbjct: 346  ARRFSDLKKYYAPRNQEKELLDVLQKNGLLLRGLWVPKTALLYPKKEGSSRKKDDDNLRT 405

Query: 912  ARNYVLLLFSKDVIIKDEQLPKSPPLVKAMKDVLHGLATYRNKLKDWKLKELPDLNFIRL 1091
            ARN++L  F K+ +I   +L   PPL     + L  LA YR   +DWKLKE  D++F  L
Sbjct: 406  ARNHILNSFQKNPVISYSELNVYPPLKPHFDETLKFLAVYRPSTRDWKLKEQSDVSFAEL 465

Query: 1092 NPAV 1103
            +P +
Sbjct: 466  HPDI 469


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