BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00001792
         (1344 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus...   760   0.0  
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   731   0.0  
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   728   0.0  
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   726   0.0  
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   725   0.0  
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]       691   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   686   0.0  
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   682   0.0  
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              682   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   682   0.0  
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   681   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   677   0.0  
ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isof...   670   0.0  
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...   670   0.0  
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...   670   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   663   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   659   0.0  
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   658   0.0  
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   658   0.0  
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]      641   0.0  

>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
          Length = 941

 Score =  760 bits (1963), Expect = 0.0
 Identities = 369/448 (82%), Positives = 404/448 (90%), Gaps = 1/448 (0%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + VRVVEAAVQIGVA+E EVRI +FL+K K ++K+E+  E + DSS E  I+R+RVK LI
Sbjct: 207  RCVRVVEAAVQIGVAVENEVRIHSFLEKMKKNEKREIGDESQVDSSNEAVIMRKRVKSLI 266

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            KRNRV EV KL+RSEEF+SWGRD QAKLGCCL+ELLTQSAYVQPP++Q+ADSPPDVRPAF
Sbjct: 267  KRNRVIEVHKLVRSEEFKSWGRDIQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAF 326

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RHIFKIA R PGQ+IVK+YG IECDPLVL GLDKTV+HMIIPYVPMLVPPK+WKGYD+GG
Sbjct: 327  RHIFKIATRLPGQTIVKRYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWKGYDRGG 386

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSYLMRTHGSR QQDAV+ V  KQMQKVYEALDTLGNTKWRV++RIL+VVEN+WAA
Sbjct: 387  YLFLPSYLMRTHGSRHQQDAVKTVTSKQMQKVYEALDTLGNTKWRVNKRILTVVENIWAA 446

Query: 623  GGDIAGLVNRENVPIPE-LLSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARN 447
            GG+IAGLVNRE++PIPE LLS+D KE            KINQERHSQRCD ELKLSVAR 
Sbjct: 447  GGNIAGLVNREDIPIPELLLSEDMKEAKKWKWSVRKVKKINQERHSQRCDTELKLSVARK 506

Query: 446  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 267
            MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKIH+AN
Sbjct: 507  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHVAN 566

Query: 266  LYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALK 87
            LYGGGVEKLSYD RV+FVENNI+EI DSADNSLNGNRWWLKAEDPFQCLAACINL EALK
Sbjct: 567  LYGGGVEKLSYDDRVAFVENNISEIFDSADNSLNGNRWWLKAEDPFQCLAACINLVEALK 626

Query: 86   SSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            S SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 627  SPSPHTVISHLPIHQDGSCNGLQHYAAL 654


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score =  731 bits (1888), Expect = 0.0
 Identities = 350/447 (78%), Positives = 400/447 (89%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + V+VV+AAVQIG+A+E EVRI NFL+K K  QK    A+ +ED S+E  ILR+RVK LI
Sbjct: 244  RCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQEDMSRETMILRKRVKSLI 303

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            KRNRV EV+KL++SEE ESWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+RPAF
Sbjct: 304  KRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAF 363

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RH+F+IA R+PG+SIVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGG
Sbjct: 364  RHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGG 423

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRV++RILSVVE++WA 
Sbjct: 424  YLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAG 483

Query: 623  GGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNM 444
            GG+IAGLV+R++VPIPEL SDD  E+           KINQE HSQRCD ELKLSVAR +
Sbjct: 484  GGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQELHSQRCDTELKLSVARKL 543

Query: 443  KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 264
            KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLA+L
Sbjct: 544  KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASL 603

Query: 263  YGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKS 84
            Y GG+EKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKS
Sbjct: 604  YAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKS 663

Query: 83   SSPHTVISHLPIHQDGSCNGLQHYAAL 3
            SSPHTV SHLPIHQDGSCNGLQHYAAL
Sbjct: 664  SSPHTVFSHLPIHQDGSCNGLQHYAAL 690


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            tuberosum]
          Length = 1015

 Score =  728 bits (1879), Expect = 0.0
 Identities = 347/447 (77%), Positives = 399/447 (89%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + V+VV+AAVQIG+A+E EVRI NF++K K  QK    A+G+ED S+E  ILR+RVK LI
Sbjct: 282  RCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMSGAQGQEDMSRETMILRKRVKSLI 341

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            KRNRV EV+KL++SEE ESWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+RPAF
Sbjct: 342  KRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAF 401

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RH+F+IA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGG
Sbjct: 402  RHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGG 461

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRV++RILSVVE++WA 
Sbjct: 462  YLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAG 521

Query: 623  GGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNM 444
            GG+IAGLV+R++VPIPEL SDD  E+           KINQE HSQRCD ELKLSVAR +
Sbjct: 522  GGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKL 581

Query: 443  KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 264
            KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLK+HLA+L
Sbjct: 582  KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASL 641

Query: 263  YGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKS 84
            Y GG+EKL YDAR++FVEN+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEALKS
Sbjct: 642  YAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKS 701

Query: 83   SSPHTVISHLPIHQDGSCNGLQHYAAL 3
             SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 702  PSPHTVISHLPIHQDGSCNGLQHYAAL 728


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            lycopersicum]
          Length = 1007

 Score =  726 bits (1873), Expect = 0.0
 Identities = 345/447 (77%), Positives = 398/447 (89%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + V+VV+AAVQIG+A+E EVRI NF++K K  QK    A+G+ED S+E  ILR+RVK LI
Sbjct: 274  RCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMTGAQGQEDMSRETMILRKRVKSLI 333

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            KRNRV EV+KL++SEE ESWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+RPAF
Sbjct: 334  KRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAF 393

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RH+F+IA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGG
Sbjct: 394  RHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGG 453

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRV++RILSVVE +WA 
Sbjct: 454  YLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVETIWAG 513

Query: 623  GGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNM 444
            GG+IAGLV+R++VPIPEL SDD  E+           KINQE HSQRCD ELKLSVAR +
Sbjct: 514  GGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKL 573

Query: 443  KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 264
            +DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLK+HLA+L
Sbjct: 574  RDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASL 633

Query: 263  YGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKS 84
            Y GG+EKL YDAR++FVEN+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEA+KS
Sbjct: 634  YAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKS 693

Query: 83   SSPHTVISHLPIHQDGSCNGLQHYAAL 3
             SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 694  LSPHTVISHLPIHQDGSCNGLQHYAAL 720


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score =  725 bits (1872), Expect = 0.0
 Identities = 351/448 (78%), Positives = 399/448 (89%), Gaps = 1/448 (0%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + V+VV+AAVQIG+A+E EVRI NFL+K K  QK    A+ +ED SKE  ILR+RVK LI
Sbjct: 243  RCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQEDMSKETMILRKRVKSLI 302

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            KRNRV EV+KL++SEE ESWGRDTQAKLGC LLELLT++AYVQ P+DQ+AD+PPD+RPAF
Sbjct: 303  KRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQRPVDQSADTPPDIRPAF 362

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RH+FKIA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGG
Sbjct: 363  RHVFKIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGG 422

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSYLMRTHGSRRQQDAVR VP KQMQ+VYEALDTLG+TKWRV++RIL+VVE++WA 
Sbjct: 423  YLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILNVVESIWAG 482

Query: 623  GGDIAGLVNRENVPIPELL-SDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARN 447
            GG+IAGLV+R++VPIPEL  SDD  E+           KINQE HSQRCD ELKLSVAR 
Sbjct: 483  GGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTELKLSVARK 542

Query: 446  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 267
            +KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLA+
Sbjct: 543  LKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLAS 602

Query: 266  LYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALK 87
            LY GGVEKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALK
Sbjct: 603  LYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALK 662

Query: 86   SSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            SSSPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 663  SSSPHTVISHLPIHQDGSCNGLQHYAAL 690


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score =  691 bits (1783), Expect = 0.0
 Identities = 329/447 (73%), Positives = 384/447 (85%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + +RVVEAA+QIG AIEQEVRI  FL+K K+ QK+ V +E +E+S ++   LR+RVK L+
Sbjct: 220  RCIRVVEAALQIGKAIEQEVRIHAFLEKTKH-QKEAVASESQENSCEKAANLRKRVKNLV 278

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            +R R  EVQKL++SE  E W R+ QAKLGCCL+ LLTQSAYVQPP+ Q+ADSPPDVRPAF
Sbjct: 279  RRGRGVEVQKLVKSENHEPWTREIQAKLGCCLINLLTQSAYVQPPVSQSADSPPDVRPAF 338

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RH FKIA REP Q++V++YG IECDPL+L G +  V+HM++P++PML+PPK+WKGYDKGG
Sbjct: 339  RHFFKIATREPRQTVVRRYGVIECDPLILDGFESNVKHMMVPHIPMLIPPKKWKGYDKGG 398

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSY+MRTHGSRRQQDAV+ V  ++MQKV+EALDTLGNTKWRV++ ILSVVE++WAA
Sbjct: 399  YLFLPSYVMRTHGSRRQQDAVKTVSPRKMQKVFEALDTLGNTKWRVNKSILSVVEDIWAA 458

Query: 623  GGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNM 444
            GG+IAGLVNRE+VP+PEL SDD  EI           K N E HS RCD ELKLSVAR M
Sbjct: 459  GGNIAGLVNREDVPLPELHSDDPIEIKKWKFSIRKAKKNNMEMHSLRCDTELKLSVARAM 518

Query: 443  KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANL 264
            KDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGILEF+EGRPLGKSGL WLK+HLANL
Sbjct: 519  KDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGILEFSEGRPLGKSGLYWLKLHLANL 578

Query: 263  YGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKS 84
            +GGGV+KL YD R+SFVENNI E+ DSADN L+GNRWWLKAEDPFQ LAACIN+SEAL+S
Sbjct: 579  FGGGVQKLPYDERLSFVENNITEVFDSADNPLSGNRWWLKAEDPFQFLAACINISEALRS 638

Query: 83   SSPHTVISHLPIHQDGSCNGLQHYAAL 3
            SSPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 639  SSPHTVISHLPIHQDGSCNGLQHYAAL 665


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score =  686 bits (1769), Expect = 0.0
 Identities = 330/446 (73%), Positives = 379/446 (84%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            VRVV+AAVQIG+AIEQEVRI NFL+K KN Q+K+ + E +E   KE  +LR+RV  LI+R
Sbjct: 150  VRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQRKKTMHEVQETMDKEKEVLRKRVNSLIRR 209

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ EVQ L++ +E + W R TQAKLG  L+ELLT++AYVQPP++Q+ D PPDVRPAFRH
Sbjct: 210  KRLMEVQNLVKQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRH 269

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
            IFK   + PGQ IVKKYG IECDPL+L GLD T +HM+IPY PMLVPPK+WKGYDKGG+L
Sbjct: 270  IFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHL 329

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQ AVR+VP KQMQKV+EALDTLGNTKWRV+RR+L VVE +W +GG
Sbjct: 330  FLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGG 389

Query: 617  DIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            +IAGLV+RE++PIPE  S DD  EI           KINQERHSQRCD ELKLSVAR +K
Sbjct: 390  NIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLK 449

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            DEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEF EGRPLGKSGLRWLKIHLANLY
Sbjct: 450  DEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLY 509

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLS+D R++FVEN+++EI DSA N +NG RWWLKAEDPFQCLAACINLSEAL S+
Sbjct: 510  SGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSA 569

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 570  SPHTVISHLPIHQDGSCNGLQHYAAL 595


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  682 bits (1759), Expect = 0.0
 Identities = 333/446 (74%), Positives = 377/446 (84%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            V+VV+AAV IG+AIEQEVRI +FL+K KN QKK+     E+  SKE  ILR+RV  LI+R
Sbjct: 244  VQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVNGLIRR 303

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ EVQKLL  EE + WGRD QAKLG  L+ELLT++AYVQPP+ Q ADSPPDVRPAFRH
Sbjct: 304  KRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDVRPAFRH 363

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK  A+ PGQ IVK YG IECDPLVL GLDKT +HM+IPYVPMLVPPKRWKGYDKGG+L
Sbjct: 364  RFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHL 423

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+Q DA+R +   QMQKV+EALD LG+TKWRV++++LSVVE++WA GG
Sbjct: 424  FLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGG 483

Query: 617  DIAGLVNRENVPIPELL-SDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            +IAGLVNRE+VP+P+   S+D KEI           KINQERHSQRCD ELKLSVAR MK
Sbjct: 484  NIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVARKMK 543

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY
Sbjct: 544  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY 603

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLSY+ R++FV+N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S 
Sbjct: 604  AGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSP 663

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 664  SPHTVISHLPIHQDGSCNGLQHYAAL 689


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  682 bits (1759), Expect = 0.0
 Identities = 325/446 (72%), Positives = 382/446 (85%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            VRVV+AAVQIG+AIEQEVRI +FL+K KN ++ + V   +E   +E  ILR+RVK  I++
Sbjct: 77   VRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQE-GLREKEILRKRVKSFIRK 135

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             ++ EVQKL+++EE   WGRDTQAKLG  L+ELLT++AYVQ P++Q+AD PPDVRPAFRH
Sbjct: 136  KKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRH 195

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK   +E GQ   +KYG IECDPLVL GLD+T +HM+IPYVPML+PPK+WKGYDKGGYL
Sbjct: 196  TFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYL 255

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQDAV++VP +Q+QKV+EALDTLGNTKWR++RR+LSVVE++WA GG
Sbjct: 256  FLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGG 315

Query: 617  DIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            ++ GLV+RENVP+PE  S +D  EI           KINQERHS RCD E+KLSVAR MK
Sbjct: 316  NLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMK 375

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKI LANLY
Sbjct: 376  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLY 435

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SS
Sbjct: 436  AGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSS 495

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 496  SPHTVISHLPIHQDGSCNGLQHYAAL 521


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  682 bits (1759), Expect = 0.0
 Identities = 325/446 (72%), Positives = 382/446 (85%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            VRVV+AAVQIG+AIEQEVRI +FL+K KN ++ + V   +E   +E  ILR+RVK  I++
Sbjct: 248  VRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQE-GLREKEILRKRVKSFIRK 306

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             ++ EVQKL+++EE   WGRDTQAKLG  L+ELLT++AYVQ P++Q+AD PPDVRPAFRH
Sbjct: 307  KKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRH 366

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK   +E GQ   +KYG IECDPLVL GLD+T +HM+IPYVPML+PPK+WKGYDKGGYL
Sbjct: 367  TFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYL 426

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQDAV++VP +Q+QKV+EALDTLGNTKWR++RR+LSVVE++WA GG
Sbjct: 427  FLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGG 486

Query: 617  DIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            ++ GLV+RENVP+PE  S +D  EI           KINQERHS RCD E+KLSVAR MK
Sbjct: 487  NLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMK 546

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKI LANLY
Sbjct: 547  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLY 606

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SS
Sbjct: 607  AGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSS 666

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 667  SPHTVISHLPIHQDGSCNGLQHYAAL 692


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  681 bits (1757), Expect = 0.0
 Identities = 327/446 (73%), Positives = 377/446 (84%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            VRVV+AAVQIG+AIEQEVRI NFL+K KN Q+K+ + + +E   KE  +LR+RV  LI+R
Sbjct: 250  VRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRR 309

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ EVQ L+  +E + W RD QAKLG  L+ELLT++AYVQPP+DQ+   PPDVRPAFRH
Sbjct: 310  KRLMEVQNLVIQDETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRH 369

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
            IFK   + PGQ  VKKYG IECDPL+L GLD T +HM+IPY PMLVPPK+W+GYDKGG+L
Sbjct: 370  IFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHL 429

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQDAVR+VP KQMQKV+EALDTLGNTKWRV+ ++L VVE +WA+GG
Sbjct: 430  FLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGG 489

Query: 617  DIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            + AGLVNR ++PIPE LS DD  EI           KINQERHSQRCD ELKLSVAR +K
Sbjct: 490  NNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLK 549

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            DEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEFAEGRPLGKSGL WLKIHLANLY
Sbjct: 550  DEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLY 609

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLS+D R++FVEN+++EI DSA+N +NG RWWL AEDPFQCLAACINLSEALKS+
Sbjct: 610  SGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSA 669

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 670  SPHTVISHLPIHQDGSCNGLQHYAAL 695


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  677 bits (1748), Expect = 0.0
 Identities = 325/446 (72%), Positives = 378/446 (84%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            V+VV+AAV IG+AIEQEVRI +FL+K K+ Q+K+     E+  SKE  ILR+RV  LI+R
Sbjct: 241  VQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQRKKTSVADEDGLSKEKEILRKRVNGLIRR 300

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ EVQKLL+ E+ + WGRDTQAKLG  L+ELLT++A+VQPP+DQ AD PPDVRPAFRH
Sbjct: 301  KRLVEVQKLLKKEDMKPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADGPPDVRPAFRH 360

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
              K AA+ PGQ +VK YG IECDPLVL GLDKT +HM+IPYVPMLVPPKRWKGYDKGG+L
Sbjct: 361  RLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHL 420

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+Q D +R +  +QMQKV+EALD LG+TKWR+++++L+VVE++WA GG
Sbjct: 421  FLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLNVVESIWARGG 480

Query: 617  DIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            +IAGLV+RE+VP+PE   S+D  EI           K+NQERHSQRCD ELKLSVAR MK
Sbjct: 481  NIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTELKLSVARRMK 540

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            DE+GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY
Sbjct: 541  DEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLY 600

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLSYD R+SFV+N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S 
Sbjct: 601  SGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSP 660

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 661  SPHTVISHLPIHQDGSCNGLQHYAAL 686


>ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
            gi|508784242|gb|EOY31498.1| DNA/RNA polymerases
            superfamily protein isoform 3 [Theobroma cacao]
          Length = 927

 Score =  670 bits (1728), Expect = 0.0
 Identities = 317/446 (71%), Positives = 387/446 (86%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            V+VV+AAV IGVAIEQEVRI NFL+K KN Q+K+   E  +  SKE  IL++RV  LI+R
Sbjct: 247  VQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDE-VQGLSKEKEILKKRVNSLIRR 305

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ EVQKL+++EE + WGRD QAKLG  LLELLT++AYVQPPIDQ+ DSPPDV+PAFRH
Sbjct: 306  RRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRH 365

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK  +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+WKGYDKGGYL
Sbjct: 366  KFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYL 425

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRV++++L+VVE++WA+GG
Sbjct: 426  FLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGG 485

Query: 617  DIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            +IAGLV+R ++PIPE   S+D  E            KIN+ERHSQRCD ELKLSVAR M+
Sbjct: 486  NIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKME 545

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+
Sbjct: 546  NEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLF 605

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLS+D R++FV+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSS
Sbjct: 606  AGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSS 665

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPH+V+S+LPIHQDGSCNGLQHYAAL
Sbjct: 666  SPHSVLSYLPIHQDGSCNGLQHYAAL 691


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
            gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
            superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score =  670 bits (1728), Expect = 0.0
 Identities = 317/446 (71%), Positives = 387/446 (86%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            V+VV+AAV IGVAIEQEVRI NFL+K KN Q+K+   E  +  SKE  IL++RV  LI+R
Sbjct: 125  VQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDE-VQGLSKEKEILKKRVNSLIRR 183

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ EVQKL+++EE + WGRD QAKLG  LLELLT++AYVQPPIDQ+ DSPPDV+PAFRH
Sbjct: 184  RRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRH 243

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK  +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+WKGYDKGGYL
Sbjct: 244  KFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYL 303

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRV++++L+VVE++WA+GG
Sbjct: 304  FLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGG 363

Query: 617  DIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            +IAGLV+R ++PIPE   S+D  E            KIN+ERHSQRCD ELKLSVAR M+
Sbjct: 364  NIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKME 423

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+
Sbjct: 424  NEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLF 483

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLS+D R++FV+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSS
Sbjct: 484  AGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSS 543

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPH+V+S+LPIHQDGSCNGLQHYAAL
Sbjct: 544  SPHSVLSYLPIHQDGSCNGLQHYAAL 569


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
            gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  670 bits (1728), Expect = 0.0
 Identities = 317/446 (71%), Positives = 387/446 (86%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            V+VV+AAV IGVAIEQEVRI NFL+K KN Q+K+   E  +  SKE  IL++RV  LI+R
Sbjct: 247  VQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDE-VQGLSKEKEILKKRVNSLIRR 305

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ EVQKL+++EE + WGRD QAKLG  LLELLT++AYVQPPIDQ+ DSPPDV+PAFRH
Sbjct: 306  RRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRH 365

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK  +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+WKGYDKGGYL
Sbjct: 366  KFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYL 425

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRV++++L+VVE++WA+GG
Sbjct: 426  FLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGG 485

Query: 617  DIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            +IAGLV+R ++PIPE   S+D  E            KIN+ERHSQRCD ELKLSVAR M+
Sbjct: 486  NIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKME 545

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+
Sbjct: 546  NEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLF 605

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGVEKLS+D R++FV+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSS
Sbjct: 606  AGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSS 665

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPH+V+S+LPIHQDGSCNGLQHYAAL
Sbjct: 666  SPHSVLSYLPIHQDGSCNGLQHYAAL 691


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score =  663 bits (1710), Expect = 0.0
 Identities = 316/448 (70%), Positives = 382/448 (85%), Gaps = 1/448 (0%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + V+VV+AAV IG+AIEQE+RI +FL+K KN ++K+++A+ EE  SKE  +LR+RV  LI
Sbjct: 275  RCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLI 334

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            K  RV E QKLL++EE + WGRDTQAKLG  L+ELL ++AYVQ P++    SPPDVRPAF
Sbjct: 335  KSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAF 394

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RH FK   + PGQ   K+YG +ECDPLVL GLD++ +HM+IPYVPMLVPPK+WKGY+KGG
Sbjct: 395  RHRFKTILKHPGQKTTKRYGVVECDPLVLAGLDRSAKHMLIPYVPMLVPPKKWKGYNKGG 454

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSY+MRTHGSR+QQ+A+++V    M+KV+EALDTLG+TKWRV++++LSV+E++W +
Sbjct: 455  YLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVS 514

Query: 623  GGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARN 447
            GG+IAGLV+R +VPIPE  LS+D  E+           KINQERHSQRCD ELKLSVAR 
Sbjct: 515  GGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARR 574

Query: 446  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 267
            MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFAEGRPLGKSGLRWLKIHLAN
Sbjct: 575  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLAN 634

Query: 266  LYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALK 87
            L+ GGVEKLS+D R++FVEN++ EI DSA+N +NG+RWWL AEDPFQCLAACINLSEALK
Sbjct: 635  LFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALK 694

Query: 86   SSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            SSSPH+VISHLPIHQDGSCNGLQHYAAL
Sbjct: 695  SSSPHSVISHLPIHQDGSCNGLQHYAAL 722


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  659 bits (1699), Expect = 0.0
 Identities = 314/448 (70%), Positives = 381/448 (85%), Gaps = 1/448 (0%)
 Frame = -2

Query: 1343 KSVRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLI 1164
            + V+VV+AAV IG+AIEQE+RI +FL+K KN ++K+++A+ EE  SKE  +LR+RV  LI
Sbjct: 278  RCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLI 337

Query: 1163 KRNRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAF 984
            K  RV E QKLL++EE + WGRDTQAKLG  L+ELL ++AYVQ P++    SPPDVRPAF
Sbjct: 338  KSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAF 397

Query: 983  RHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGG 804
            RH FK   + PGQ   K+YG +ECDPLVL GLD++ +HM+IPYVPMLVPPK+WKGY+KGG
Sbjct: 398  RHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGG 457

Query: 803  YLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAA 624
            YLFLPSY+MRTHGSR+QQ+A+++V    M+KV+EALDTLG+TKWRV++++LSV+E++W +
Sbjct: 458  YLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVS 517

Query: 623  GGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARN 447
            GG+IAGLV+R +V IPE  LS+D  E+           KINQERHSQRCD ELKLSVAR 
Sbjct: 518  GGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARR 577

Query: 446  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLAN 267
            MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFAEGRPLGKSGLRWLKIHLAN
Sbjct: 578  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLAN 637

Query: 266  LYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALK 87
            L+ GGVEKLS+D R++FVEN++ EI DSA+N +NG+RWWL AEDPFQCLAACINL+EALK
Sbjct: 638  LFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLAEALK 697

Query: 86   SSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            SSSPH+VISHLPIHQDGSCNGLQHYAAL
Sbjct: 698  SSSPHSVISHLPIHQDGSCNGLQHYAAL 725


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  658 bits (1698), Expect = 0.0
 Identities = 316/445 (71%), Positives = 379/445 (85%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            V+VV+AAVQIG AIEQEVRIQ+ L+K +++Q+ +V A+  E  +KE  +LR++V  LI+R
Sbjct: 245  VQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRAD-TECLTKEKEVLRKQVNGLIRR 303

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             ++ EVQKLL+ EEF++WGRDTQAKLG  L+ELL +SA++QPP+ Q+ADSPPD+RPAF H
Sbjct: 304  RKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWH 363

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK  A+ PGQ+ VKKYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+WKGYDKGG+ 
Sbjct: 364  GFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHF 423

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGS RQQDA++ +  KQMQKV+EALD LG+TKWRV+R +LSVVE+LWA GG
Sbjct: 424  FLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGG 483

Query: 617  DIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKD 438
            + AGLV+R++VPIPE    D  E+           KINQE HSQRCDVELKLSVAR MKD
Sbjct: 484  NTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKD 543

Query: 437  EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYG 258
            EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLKIHLANLY 
Sbjct: 544  EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYA 603

Query: 257  GGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSS 78
            GGVEKLSYD R++FV++++  I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS+
Sbjct: 604  GGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSA 663

Query: 77   PHTVISHLPIHQDGSCNGLQHYAAL 3
            PHTVIS+LPIHQDGSCNGLQHYAAL
Sbjct: 664  PHTVISYLPIHQDGSCNGLQHYAAL 688


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  658 bits (1698), Expect = 0.0
 Identities = 316/445 (71%), Positives = 379/445 (85%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            V+VV+AAVQIG AIEQEVRIQ+ L+K +++Q+ +V A+  E  +KE  +LR++V  LI+R
Sbjct: 245  VQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRAD-TECLTKEKEVLRKQVNGLIRR 303

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             ++ EVQKLL+ EEF++WGRDTQAKLG  L+ELL +SA++QPP+ Q+ADSPPD+RPAF H
Sbjct: 304  RKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWH 363

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FK  A+ PGQ+ VKKYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+WKGYDKGG+ 
Sbjct: 364  GFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHF 423

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGS RQQDA++ +  KQMQKV+EALD LG+TKWRV+R +LSVVE+LWA GG
Sbjct: 424  FLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGG 483

Query: 617  DIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKD 438
            + AGLV+R++VPIPE    D  E+           KINQE HSQRCDVELKLSVAR MKD
Sbjct: 484  NTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKD 543

Query: 437  EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYG 258
            EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLKIHLANLY 
Sbjct: 544  EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYA 603

Query: 257  GGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSS 78
            GGVEKLSYD R++FV++++  I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS+
Sbjct: 604  GGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSA 663

Query: 77   PHTVISHLPIHQDGSCNGLQHYAAL 3
            PHTVIS+LPIHQDGSCNGLQHYAAL
Sbjct: 664  PHTVISYLPIHQDGSCNGLQHYAAL 688


>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score =  641 bits (1653), Expect = 0.0
 Identities = 307/446 (68%), Positives = 370/446 (82%), Gaps = 1/446 (0%)
 Frame = -2

Query: 1337 VRVVEAAVQIGVAIEQEVRIQNFLKKEKNDQKKEVVAEGEEDSSKEVTILRQRVKRLIKR 1158
            VR+V+AA+QIG AIEQE++I +FL+K KN +K    ++  ED  KE  I R RVK LIKR
Sbjct: 259  VRLVQAALQIGTAIEQEIKIHSFLEKTKNIRKN--ASDLPEDLLKEKEIQRNRVKSLIKR 316

Query: 1157 NRVAEVQKLLRSEEFESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRH 978
             R+ E  KL+ SE+ +SW +DTQAKLG  L+ELL  +AY+Q P  Q+AD+PPDVRPAFRH
Sbjct: 317  KRLFEAAKLVTSEDSKSWSQDTQAKLGSRLIELLIDTAYIQHPTSQSADTPPDVRPAFRH 376

Query: 977  IFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYL 798
             FKI   E GQ +VK+YG IECDPLVL G+D++ R+MIIPYVPML+PPK WKGYDKGGYL
Sbjct: 377  KFKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIPYVPMLIPPKNWKGYDKGGYL 436

Query: 797  FLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVSRRILSVVENLWAAGG 618
            FLPSY+MRTHGSR+QQDA+R  P +QMQKV+EAL+TLG+TKWR++R++L VVENLWA+GG
Sbjct: 437  FLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKWRINRKVLGVVENLWASGG 496

Query: 617  DIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMK 441
            +I GLVN ++VP+PE  L++D  EI           KIN+ERH+ RCDVELK+SVA+ MK
Sbjct: 497  NIGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRERHALRCDVELKISVAQKMK 556

Query: 440  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 261
            DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA GRPLGK+GL WLKIHLAN+Y
Sbjct: 557  DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFASGRPLGKTGLHWLKIHLANVY 616

Query: 260  GGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSS 81
             GGV+KLSY+AR +FVEN++ E+ DSA N +NGNRWWL AEDPFQCLAACI+L+ AL SS
Sbjct: 617  AGGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAEDPFQCLAACIDLTGALNSS 676

Query: 80   SPHTVISHLPIHQDGSCNGLQHYAAL 3
            SPH+ IS+LPIHQDGSCNGLQHYAAL
Sbjct: 677  SPHSFISYLPIHQDGSCNGLQHYAAL 702