BLASTX nr result

ID: Mentha26_contig00001735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00001735
         (374 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30902.1| hypothetical protein MIMGU_mgv1a011416mg [Mimulus...    65   1e-08
ref|XP_006364627.1| PREDICTED: THO complex subunit 4-like isofor...    59   9e-07
ref|XP_004250178.1| PREDICTED: uncharacterized protein LOC101256...    59   9e-07
ref|XP_006346755.1| PREDICTED: THO complex subunit 4-like [Solan...    58   1e-06
ref|XP_004236691.1| PREDICTED: THO complex subunit 4-A-like [Sol...    57   3e-06

>gb|EYU30902.1| hypothetical protein MIMGU_mgv1a011416mg [Mimulus guttatus]
          Length = 282

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -2

Query: 166 QTFRRTKNLPWQNGLIEESLKAAGMSGLEAGTKLGLKN 53
           ++FRRTKNLPWQNGL E+ LKAAG+SGL+AGTKL + N
Sbjct: 70  KSFRRTKNLPWQNGLFEDGLKAAGLSGLDAGTKLSISN 107


>ref|XP_006364627.1| PREDICTED: THO complex subunit 4-like isoform X1 [Solanum
           tuberosum] gi|565398120|ref|XP_006364628.1| PREDICTED:
           THO complex subunit 4-like isoform X2 [Solanum
           tuberosum]
          Length = 282

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
 Frame = -2

Query: 166 QTFRRTKNLPWQNGLIEESLKAAGMSG-LEAGTKLGLKN 53
           +TFRRTKNLPWQNGL E+SL+AAG+S  LE+GTKL + N
Sbjct: 70  KTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSN 108


>ref|XP_004250178.1| PREDICTED: uncharacterized protein LOC101256343 [Solanum
           lycopersicum]
          Length = 283

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
 Frame = -2

Query: 166 QTFRRTKNLPWQNGLIEESLKAAGMSG-LEAGTKLGLKN 53
           +TFRRTKNLPWQNGL E+SL+AAG+S  LE+GTKL + N
Sbjct: 70  KTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSN 108


>ref|XP_006346755.1| PREDICTED: THO complex subunit 4-like [Solanum tuberosum]
          Length = 276

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/39 (69%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = -2

Query: 166 QTFRRTKNLPWQNGLIEESLKAAGM-SGLEAGTKLGLKN 53
           ++FRRTKNLPWQNGL+E+SL+AAG+ SGLE GTK+ + N
Sbjct: 65  KSFRRTKNLPWQNGLLEDSLRAAGVSSGLETGTKVYVSN 103


>ref|XP_004236691.1| PREDICTED: THO complex subunit 4-A-like [Solanum lycopersicum]
          Length = 272

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = -2

Query: 166 QTFRRTKNLPWQNGLIEESLKAAGM-SGLEAGTKLGLKN 53
           ++F RTKNLPWQNGL+E+SL+AAG+ SGLE+GTK+ + N
Sbjct: 65  KSFHRTKNLPWQNGLLEDSLRAAGISSGLESGTKVYVSN 103


Top