BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00001623
         (919 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus...   257   4e-66
gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus...   249   8e-64
ref|XP_002318093.2| hypothetical protein POPTR_0012s09200g [Popu...   244   3e-62
ref|XP_004299163.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   243   6e-62
ref|XP_007209411.1| hypothetical protein PRUPE_ppa009286mg [Prun...   242   1e-61
dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemu...   240   5e-61
ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   238   2e-60
ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   238   2e-60
dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sat...   238   2e-60
gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indi...   238   2e-60
sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c...   238   3e-60
sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, c...   237   4e-60
ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arab...   237   6e-60
ref|XP_006476920.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   236   7e-60
ref|XP_006439972.1| hypothetical protein CICLE_v10020731mg [Citr...   236   7e-60
ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ri...   236   7e-60
sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, c...   236   1e-59
ref|XP_006660380.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   236   1e-59
emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]          236   1e-59
ref|XP_006661552.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   235   2e-59

>gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus guttatus]
          Length = 294

 Score =  257 bits (657), Expect = 4e-66
 Identities = 140/222 (63%), Positives = 168/222 (75%), Gaps = 7/222 (3%)
 Frame = -1

Query: 907 NNPIVLDGIVPDEEEVKGELSWETDE-NEVEG-GDTAPPEGAKVYVGNLPFDVDSQALGE 734
           NNP++L+    +EEEV+G   W  +   E  G G   PPEGAKVYVGNLP+DVDS+ L +
Sbjct: 75  NNPVILEE--KEEEEVEGGFKWGANVVGEAAGEGYAQPPEGAKVYVGNLPYDVDSEKLAQ 132

Query: 733 LFEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAA 554
           LFE AG V +AEVIY R +  SRGFGFVTMST EEA KAVE+ SR+DM GR+LTVNIAA 
Sbjct: 133 LFEPAGVVEIAEVIYSRDTEQSRGFGFVTMSTEEEAEKAVEMFSRFDMGGRLLTVNIAAP 192

Query: 553 KGSR----PAARETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFG 386
           KGSR    P + E  H+IYVGNL W +D+ +LEELF ++G VVSARV+SDRE+GRSRGFG
Sbjct: 193 KGSRIERPPPSFEPTHKIYVGNLSWNVDDSSLEELFSQHGKVVSARVISDRETGRSRGFG 252

Query: 385 FVEMSTESEMNNAISNLDGQDLNGRPIKVNAALE-RQNRPRF 263
           FV MS+ SEMN+AI+NLDG+ L+GR IKVNAA E R  R RF
Sbjct: 253 FVVMSSASEMNDAIANLDGESLDGRAIKVNAASEDRPRRSRF 294


>gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus guttatus]
          Length = 301

 Score =  249 bits (637), Expect = 8e-64
 Identities = 131/221 (59%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
 Frame = -1

Query: 910 ENNPIVLDGIVPDEEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGEL 731
           E NP++++     EE  +G  +W           + P E AKVYVGNLP+DVDS+ L +L
Sbjct: 84  EGNPVLVE---EQEEGFQGNFNWGAASGTENDVVSEPSEEAKVYVGNLPYDVDSEKLAKL 140

Query: 730 FEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAK 551
           FE AG V +AE+IY+R +  SRGFGFVTMSTVEEA KAV++  RYD+ GR+LTVN AA K
Sbjct: 141 FEDAGVVEIAEIIYNRETDQSRGFGFVTMSTVEEAEKAVDMFHRYDIGGRLLTVNKAAPK 200

Query: 550 GSRP-----AARETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFG 386
           GSRP      + ET  +IYVGNLPW  D+  LEELF EYG VVSARVVSDRE+GRSRGFG
Sbjct: 201 GSRPERVPRVSSETTPKIYVGNLPWTADDSRLEELFSEYGKVVSARVVSDRETGRSRGFG 260

Query: 385 FVEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNRPRF 263
           FV MS ESE+N+AI+NLDGQ L+GRPI+VN A +R  R  F
Sbjct: 261 FVVMSNESEVNDAIANLDGQSLDGRPIRVNVAQDRPRRDSF 301


>ref|XP_002318093.2| hypothetical protein POPTR_0012s09200g [Populus trichocarpa]
           gi|550326725|gb|EEE96313.2| hypothetical protein
           POPTR_0012s09200g [Populus trichocarpa]
          Length = 382

 Score =  244 bits (623), Expect = 3e-62
 Identities = 132/237 (55%), Positives = 164/237 (69%), Gaps = 33/237 (13%)
 Frame = -1

Query: 883 IVPDEEEVKGELSWETDEN----------EVEGGDTA-------------------PPEG 791
           +   E+E +GE +W  +E+          E EG D A                   PPE 
Sbjct: 144 LTESEQEEQGESNWVNEESNDFEGKVSEWEAEGEDAAATEAIRGEGESGDEEGFVEPPEE 203

Query: 790 AKVYVGNLPFDVDSQALGELFEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVE 611
           AK++VGNLP+DVDS+ L  LFEQAG V +AEVIY+R +  SRGFGFVTMSTVEE+ KAVE
Sbjct: 204 AKIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVE 263

Query: 610 LLSRYDMNGRILTVNIAAAKGSR----PAARETGHRIYVGNLPWELDNFALEELFCEYGA 443
           +L RYD++GR LTVN AA +GSR    P   E G+RIYVGNLPW++D+  LE++F E+G 
Sbjct: 264 MLHRYDLDGRFLTVNKAAPRGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQIFSEHGK 323

Query: 442 VVSARVVSDRESGRSRGFGFVEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           VVSARVV DRE+ RSRGFGFV MSTESE+N+AI+ LDGQ+L+GRPI+VN A ER  R
Sbjct: 324 VVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALDGQNLDGRPIRVNVAEERPRR 380



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
 Frame = -1

Query: 634 EEANKAVELLSRYDMNGRILTVNIAAAKGSRPAARETGH-------RIYVGNLPWELDNF 476
           EE+N     +S ++  G        A +G   +  E G        +I+VGNLP+++D+ 
Sbjct: 160 EESNDFEGKVSEWEAEGEDAAAT-EAIRGEGESGDEEGFVEPPEEAKIFVGNLPYDVDSE 218

Query: 475 ALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISNLDGQDLNGRPIKVN 296
            L  LF + G V  A V+ +RE+  SRGFGFV MST  E   A+  L   DL+GR + VN
Sbjct: 219 KLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVEMLHRYDLDGRFLTVN 278

Query: 295 AALERQNRP 269
            A  R +RP
Sbjct: 279 KAAPRGSRP 287


>ref|XP_004299163.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 292

 Score =  243 bits (621), Expect = 6e-62
 Identities = 128/217 (58%), Positives = 161/217 (74%), Gaps = 4/217 (1%)
 Frame = -1

Query: 910 ENNPIVLDGIVPDEEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGEL 731
           E++P+ +DG     EE   E      E E E     PPE AK++VGNLPFDVDS+ L +L
Sbjct: 81  EDSPVAIDGAEESGEEGVFE------EREEEVAPVEPPEEAKIFVGNLPFDVDSERLAQL 134

Query: 730 FEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAK 551
           FE+AG V +AEVIY+R +  SRGFGFVTMSTVEEA++AVE  SRYD+NGR+LTVN AA +
Sbjct: 135 FEKAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEADRAVEQFSRYDLNGRLLTVNKAAPR 194

Query: 550 GSR----PAARETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGF 383
           G+R    P + E+ +RIYVGNLPW +DN  LE+LF ++G VV ARVV DRE+GRSRGFGF
Sbjct: 195 GTRAERPPRSFESSYRIYVGNLPWNVDNGELEQLFSKHGRVVDARVVFDRETGRSRGFGF 254

Query: 382 VEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           V M++ES+MN+AI  LDG+ L+GR I+VN A ERQ R
Sbjct: 255 VTMASESDMNDAIGALDGESLDGRAIRVNVAEERQRR 291


>ref|XP_007209411.1| hypothetical protein PRUPE_ppa009286mg [Prunus persica]
           gi|462405146|gb|EMJ10610.1| hypothetical protein
           PRUPE_ppa009286mg [Prunus persica]
          Length = 298

 Score =  242 bits (618), Expect = 1e-61
 Identities = 130/217 (59%), Positives = 162/217 (74%), Gaps = 4/217 (1%)
 Frame = -1

Query: 910 ENNPIVLDGIVPDEEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGEL 731
           E++ + +D     E   +G  +   +E  VE     PPE AKV+VGNLP+DVDSQ L EL
Sbjct: 84  EDSTLTIDQDEGAESGEEGVFAEREEEANVE-----PPEEAKVFVGNLPYDVDSQKLAEL 138

Query: 730 FEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAK 551
           FE+AG V +AEVIY+R +  SRGFGFVTMSTVEEA+KAVEL SRYD+NGR+LTVN AA +
Sbjct: 139 FERAGVVEIAEVIYNRDTEQSRGFGFVTMSTVEEADKAVELFSRYDLNGRLLTVNRAAPR 198

Query: 550 GSR----PAARETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGF 383
           G+R    P + E   RIYVGNLPW +DN  LE++F E+G+VV ARVV DRE+GRSRGFGF
Sbjct: 199 GTRQERTPRSFEPSFRIYVGNLPWNVDNGQLEQVFSEHGSVVEARVVFDRETGRSRGFGF 258

Query: 382 VEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           V M++E+EMN+AI+ LDGQ L+GR I+VN A ERQ R
Sbjct: 259 VTMASENEMNDAIAALDGQSLDGRAIRVNVAEERQRR 295


>dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
          Length = 306

 Score =  240 bits (613), Expect = 5e-61
 Identities = 127/221 (57%), Positives = 160/221 (72%), Gaps = 20/221 (9%)
 Frame = -1

Query: 874 DEEEVKGELSWET----------------DENEVEGGDTAPPEGAKVYVGNLPFDVDSQA 743
           D+E+  G  +W T                DE E E G + PPE AK++VGNLP+DVDS+ 
Sbjct: 84  DDEQQVGGATWGTQNFGDSEPQVSGVGNEDEEESEQGFSEPPEEAKLFVGNLPYDVDSER 143

Query: 742 LGELFEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNI 563
           L ++F+ AG V +AEVIY+R +  SRGFGFVTMSTVEEA KAVE+L+ +DMNGR+LTVN 
Sbjct: 144 LAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMLNGFDMNGRLLTVNK 203

Query: 562 AAAKGSRPAAR----ETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSR 395
           AA +GSRP       E   R+YVGNLPW++DN  LE++F E+G V+SARVVSDRE+GRSR
Sbjct: 204 AAPRGSRPERPPREFEPSCRVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSR 263

Query: 394 GFGFVEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           GFGFV M++ESEMN+AI+ LDGQ L+GR I+VN A ER  R
Sbjct: 264 GFGFVSMASESEMNDAIAALDGQTLDGRAIRVNVAEERPRR 304



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 39/83 (46%), Positives = 56/83 (67%)
 Frame = -1

Query: 517 RIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISN 338
           +++VGNLP+++D+  L ++F   G V  A V+ +RE+ RSRGFGFV MST  E   A+  
Sbjct: 129 KLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 188

Query: 337 LDGQDLNGRPIKVNAALERQNRP 269
           L+G D+NGR + VN A  R +RP
Sbjct: 189 LNGFDMNGRLLTVNKAAPRGSRP 211


>ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
           tuberosum]
          Length = 302

 Score =  238 bits (607), Expect = 2e-60
 Identities = 122/198 (61%), Positives = 155/198 (78%), Gaps = 5/198 (2%)
 Frame = -1

Query: 841 ETDENEVEGGD-TAPPEGAKVYVGNLPFDVDSQALGELFEQAGEVAVAEVIYDRMSGNSR 665
           E+DE E E  +   PPE AK++VGNLP+D+DS+ L +LF+QAG V +AEVIY+R +  SR
Sbjct: 105 ESDEAEAEAEEYEEPPEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSR 164

Query: 664 GFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSR----PAARETGHRIYVGNL 497
           GFGFVTMSTVEEA KAV L +RYD+NGR+LTVN AA +GS+    P   +  +RIYVGN+
Sbjct: 165 GFGFVTMSTVEEAEKAVVLYNRYDINGRLLTVNKAARRGSQPERPPRTFQPTYRIYVGNI 224

Query: 496 PWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISNLDGQDLN 317
           PW++D+  LE++F E+G V+SARVV DRESGRSRGFGFV MS+E+EM+ AI+NLDGQ L+
Sbjct: 225 PWDIDDARLEQVFSEHGKVISARVVYDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLD 284

Query: 316 GRPIKVNAALERQNRPRF 263
           GR I+VNAA ER  R  F
Sbjct: 285 GRTIRVNAAEERPRRNTF 302


>ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
           lycopersicum]
          Length = 296

 Score =  238 bits (607), Expect = 2e-60
 Identities = 123/198 (62%), Positives = 154/198 (77%), Gaps = 5/198 (2%)
 Frame = -1

Query: 841 ETDENEVEGGD-TAPPEGAKVYVGNLPFDVDSQALGELFEQAGEVAVAEVIYDRMSGNSR 665
           E+DE E E  +   PPE AK++VGNLP+D+DS+ L +LF+QAG V +AEVIY+R +  SR
Sbjct: 99  ESDEAEAEAEEYQEPPEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSR 158

Query: 664 GFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSR----PAARETGHRIYVGNL 497
           GFGFVTMSTVEEA KAV L +RYD+NGR+LTVN AA +GS+    P   +  +RIYVGN+
Sbjct: 159 GFGFVTMSTVEEAEKAVVLYNRYDLNGRLLTVNKAARRGSQPERPPRTFQPTYRIYVGNI 218

Query: 496 PWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISNLDGQDLN 317
           PW++D+  LE++F E+G VVSARVV DRESGRSRGFGFV MS+E EM+ AI+NLDGQ L+
Sbjct: 219 PWDIDDARLEQVFSEHGKVVSARVVYDRESGRSRGFGFVTMSSEPEMSEAIANLDGQTLD 278

Query: 316 GRPIKVNAALERQNRPRF 263
           GR I+VNAA ER  R  F
Sbjct: 279 GRTIRVNAAEERPRRNTF 296


>dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
           gi|125604308|gb|EAZ43633.1| hypothetical protein
           OsJ_28256 [Oryza sativa Japonica Group]
           gi|215697914|dbj|BAG92121.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  238 bits (607), Expect = 2e-60
 Identities = 123/204 (60%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
 Frame = -1

Query: 871 EEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGELFEQAGEVAVAEVI 692
           EEEV   +  E +E   E     PPE AKVYVGNLP+DVDS+ L +LFEQAG V VAEVI
Sbjct: 100 EEEVVASVEEEEEEAVEEEFAAEPPEEAKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVI 159

Query: 691 YDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSR----PAARET 524
           Y+R +G SRGFGFVTMST+EEA+KA+E+L+RYD+NGR+L VN AA +GSR    P     
Sbjct: 160 YNRETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERPPRQFAP 219

Query: 523 GHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAI 344
             R YVGNLPW++D+  L +LF E+G VV+A VV DRESGRSRGFGFV M+++ E+++AI
Sbjct: 220 AFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAI 279

Query: 343 SNLDGQDLNGRPIKVNAALERQNR 272
           S LDGQ+L+GRP++VN A ER  R
Sbjct: 280 SALDGQELDGRPLRVNVAAERPQR 303


>gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
          Length = 306

 Score =  238 bits (607), Expect = 2e-60
 Identities = 123/204 (60%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
 Frame = -1

Query: 871 EEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGELFEQAGEVAVAEVI 692
           EEEV   +  E +E   E     PPE AKVYVGNLP+DVDS+ L +LFEQAG V VAEVI
Sbjct: 101 EEEVVASVEEEEEEAVEEEFAAEPPEEAKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVI 160

Query: 691 YDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSR----PAARET 524
           Y+R +G SRGFGFVTMST+EEA+KA+E+L+RYD+NGR+L VN AA +GSR    P     
Sbjct: 161 YNRETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERPPRQFAP 220

Query: 523 GHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAI 344
             R YVGNLPW++D+  L +LF E+G VV+A VV DRESGRSRGFGFV M+++ E+++AI
Sbjct: 221 AFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAI 280

Query: 343 SNLDGQDLNGRPIKVNAALERQNR 272
           S LDGQ+L+GRP++VN A ER  R
Sbjct: 281 SALDGQELDGRPLRVNVAAERPQR 304


>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
           ribonucleoprotein [Nicotiana sylvestris]
           gi|19756|emb|CAA37885.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 315

 Score =  238 bits (606), Expect = 3e-60
 Identities = 131/240 (54%), Positives = 164/240 (68%), Gaps = 24/240 (10%)
 Frame = -1

Query: 910 ENNPIVLDG----------IVPDEEEVKGE----------LSWETDENEVEGGDTAPPEG 791
           E N ++LDG            P  EE + E           S E + +E E     PPE 
Sbjct: 76  EENTLILDGQGQESGDLFNFEPSGEETEEEGFVEAVGDAGESDEVEADEEEEEFQEPPED 135

Query: 790 AKVYVGNLPFDVDSQALGELFEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVE 611
           AK++VGNLP+DVDS+ L  LFEQAG V +AEVIY+R +  SRGFGFVTMSTVEEA KAVE
Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195

Query: 610 LLSRYDMNGRILTVNIAAAKGSR----PAARETGHRIYVGNLPWELDNFALEELFCEYGA 443
           + +RYD+NGR+LTVN AA +G R    P   E  +RIYVGN+PW +D+  LE+LF E+G 
Sbjct: 196 MYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGK 255

Query: 442 VVSARVVSDRESGRSRGFGFVEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNRPRF 263
           VVSARVV DRE+GRSRGFGFV M++E+EM++AI+NLDGQ L+GR I+VN A +R  R  F
Sbjct: 256 VVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRRNTF 315


>sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
           Flags: Precursor gi|100388|pir||S12109
           ribonucleoprotein, 28K, precursor - common tobacco
           gi|19750|emb|CAA37880.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 276

 Score =  237 bits (605), Expect = 4e-60
 Identities = 127/217 (58%), Positives = 164/217 (75%), Gaps = 4/217 (1%)
 Frame = -1

Query: 910 ENNPIVLDGIVPDEEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGEL 731
           ++N +VLD    D+E+     S+  +  E E     P E AK++VGNLP+D+DS+ L +L
Sbjct: 62  DDNTLVLD----DQEQGGDFPSFVGEAGETEEYQE-PSEDAKLFVGNLPYDIDSEGLAQL 116

Query: 730 FEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAK 551
           F+QAG V +AEVIY+R +  SRGFGFVTMSTVEEA+KAVEL S+YD+NGR+LTVN AA +
Sbjct: 117 FQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPR 176

Query: 550 GSRPAAR----ETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGF 383
           GSRP       +  +RIYVGN+PW++D+  LE++F E+G VVSARVV DRESGRSRGFGF
Sbjct: 177 GSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGF 236

Query: 382 VEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           V MS+E+EM+ AI+NLDGQ L+GR I+VNAA ER  R
Sbjct: 237 VTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 50/155 (32%), Positives = 78/155 (50%)
 Frame = -1

Query: 733 LFEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAA 554
           L  Q   ++++  +   +S N R   F T  +V   +    +L   +  G   +    A 
Sbjct: 26  LSTQLKPISLSSSLPTLLSLNKRTTQFPTFVSVLSEDDNTLVLDDQEQGGDFPSFVGEAG 85

Query: 553 KGSRPAARETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEM 374
           +           +++VGNLP+++D+  L +LF + G V  A V+ +RE+ RSRGFGFV M
Sbjct: 86  ETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTM 145

Query: 373 STESEMNNAISNLDGQDLNGRPIKVNAALERQNRP 269
           ST  E + A+      DLNGR + VN A  R +RP
Sbjct: 146 STVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRP 180


>ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
           lyrata] gi|297311615|gb|EFH42039.1| hypothetical protein
           ARALYDRAFT_918033 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  237 bits (604), Expect = 6e-60
 Identities = 129/213 (60%), Positives = 158/213 (74%), Gaps = 11/213 (5%)
 Frame = -1

Query: 877 PDEEEVK----GELSWETDEN---EVEGGDTAPPEGAKVYVGNLPFDVDSQALGELFEQA 719
           P+EEE +    G  S   DE+   E  G    PPE AK++VGNLP+DVDSQAL  LFEQA
Sbjct: 77  PEEEEGEDGSIGGTSVTVDESFDTEDGGKFPEPPEEAKLFVGNLPYDVDSQALAMLFEQA 136

Query: 718 GEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSRP 539
           G V ++EVIY+R +  SRGFGFVTMSTVEEA KAVE  +RY++NGR+LTVNIAA +GSRP
Sbjct: 137 GTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVNIAAPRGSRP 196

Query: 538 AAR----ETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMS 371
             +    +   RIYVGNLPW++DN  L+++F E+G VV ARVV DRE+GRSRGFGFV MS
Sbjct: 197 ERQPRQYDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMS 256

Query: 370 TESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
            E+E+N+AI+ LDGQ+L GR IKVN A ER  R
Sbjct: 257 NENEVNDAIAALDGQNLEGRAIKVNVAEERPRR 289



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 35/83 (42%), Positives = 55/83 (66%)
 Frame = -1

Query: 517 RIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISN 338
           +++VGNLP+++D+ AL  LF + G V  + V+ +R++ +SRGFGFV MST  E   A+  
Sbjct: 114 KLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVEK 173

Query: 337 LDGQDLNGRPIKVNAALERQNRP 269
            +  ++NGR + VN A  R +RP
Sbjct: 174 FNRYEVNGRLLTVNIAAPRGSRP 196


>ref|XP_006476920.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
           sinensis]
          Length = 339

 Score =  236 bits (603), Expect = 7e-60
 Identities = 124/208 (59%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
 Frame = -1

Query: 874 DEEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGELFEQAGEVAVAEV 695
           + +E  GE     +E  VE     PPE AK++VGNLP+DVDS+ L  LFE+AG V +AEV
Sbjct: 137 ERQEESGEEGVFEEEEFVE-----PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV 191

Query: 694 IYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSRPAAR----E 527
           IY+R +  SRGFGFVTMSTVEEA KAVE+  RYD++GR+LTVN AA +G++P       E
Sbjct: 192 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251

Query: 526 TGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNA 347
            G RIYVGNLPWE+DN  LE++F E+G VV+ARVV DRE+GRSRGFGFV MS+E+E+N+A
Sbjct: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311

Query: 346 ISNLDGQDLNGRPIKVNAALERQNRPRF 263
           I+ LDGQ+L+GR I+VN A +RQ R  F
Sbjct: 312 IAALDGQNLDGRAIRVNVAEDRQRRSSF 339


>ref|XP_006439972.1| hypothetical protein CICLE_v10020731mg [Citrus clementina]
           gi|557542234|gb|ESR53212.1| hypothetical protein
           CICLE_v10020731mg [Citrus clementina]
          Length = 339

 Score =  236 bits (603), Expect = 7e-60
 Identities = 124/208 (59%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
 Frame = -1

Query: 874 DEEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGELFEQAGEVAVAEV 695
           + +E  GE     +E  VE     PPE AK++VGNLP+DVDS+ L  LFE+AG V +AEV
Sbjct: 137 ERQEESGEEGVFEEEEFVE-----PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV 191

Query: 694 IYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSRPAAR----E 527
           IY+R +  SRGFGFVTMSTVEEA KAVE+  RYD++GR+LTVN AA +G++P       E
Sbjct: 192 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251

Query: 526 TGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNA 347
            G RIYVGNLPWE+DN  LE++F E+G VV+ARVV DRE+GRSRGFGFV MS+E+E+N+A
Sbjct: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311

Query: 346 ISNLDGQDLNGRPIKVNAALERQNRPRF 263
           I+ LDGQ+L+GR I+VN A +RQ R  F
Sbjct: 312 IAALDGQNLDGRAIRVNVAEDRQRRSSF 339


>ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223550401|gb|EEF51888.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 319

 Score =  236 bits (603), Expect = 7e-60
 Identities = 125/217 (57%), Positives = 158/217 (72%), Gaps = 4/217 (1%)
 Frame = -1

Query: 910 ENNPIVLDGIVPDEEEVKGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGEL 731
           E     +DG   +EEEV        + +E E     PPE AK++VGNLP+DVDSQ L  L
Sbjct: 108 EGESAAVDGQGEEEEEV-------FEGSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAML 160

Query: 730 FEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAK 551
           FEQAG V +AEVIY+R +  SRGFGFV+MSTVEEA KAVE+  R+D++GR+LTVN AA +
Sbjct: 161 FEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPR 220

Query: 550 GSR----PAARETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGF 383
           GSR    P   E G+RIYVGNLPW++DN  LE++F E+G VV ARVV DR++GRSRGFGF
Sbjct: 221 GSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGF 280

Query: 382 VEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           V MSTE+E+N+AI+ LDG+ L+GR I+VN A +R  R
Sbjct: 281 VTMSTETELNDAIAALDGRSLDGRAIRVNVAEQRPRR 317



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 38/83 (45%), Positives = 52/83 (62%)
 Frame = -1

Query: 517 RIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISN 338
           +I+VGNLP+++D+  L  LF + G V  A V+ +RE+  SRGFGFV MST  E   A+  
Sbjct: 142 KIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEM 201

Query: 337 LDGQDLNGRPIKVNAALERQNRP 269
               DL+GR + VN A  R +RP
Sbjct: 202 FHRHDLDGRLLTVNKAAPRGSRP 224


>sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
          Length = 233

 Score =  236 bits (601), Expect = 1e-59
 Identities = 127/217 (58%), Positives = 160/217 (73%), Gaps = 11/217 (5%)
 Frame = -1

Query: 889 DGIVPDEEEVKGELSWET-----DENEVEGGD--TAPPEGAKVYVGNLPFDVDSQALGEL 731
           + ++  E + +G +SW +     DE  VEGG   + PPE AK++VGNLP+DVDS+ L  +
Sbjct: 15  NAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGI 74

Query: 730 FEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAK 551
           F+ AG V +AEVIY+R +  SRGFGFVTMSTVEEA KAVELL+ YDM+GR LTVN AA +
Sbjct: 75  FDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPR 134

Query: 550 GSRPAAR----ETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGF 383
           GS   A     E   R+YVGNLPW++D   LE+LF E+G VVSARVVSDRE+GRSRGFGF
Sbjct: 135 GSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGF 194

Query: 382 VEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           V MS+ESE+N+AI+ LDGQ L+GR ++VN A ER  R
Sbjct: 195 VTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 231



 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = -1

Query: 517 RIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISN 338
           +++VGNLP+++D+  L  +F   G V  A V+ +RE+ RSRGFGFV MST  E   A+  
Sbjct: 56  KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115

Query: 337 LDGQDLNGRPIKVNAALER---QNRPRF*FATRTK*SCYMPFL*WDFE 203
           L+G D++GR + VN A  R   +  PR  F    +   Y+  L WD +
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCR--VYVGNLPWDVD 161


>ref|XP_006660380.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Oryza
           brachyantha]
          Length = 305

 Score =  236 bits (601), Expect = 1e-59
 Identities = 125/211 (59%), Positives = 159/211 (75%), Gaps = 9/211 (4%)
 Frame = -1

Query: 877 PDEEEV-----KGELSWETDENEVEGGDTAPPEGAKVYVGNLPFDVDSQALGELFEQAGE 713
           PDEEE      +GE   E +E  VE     PPE AKVYVGNLP+DVDS+ L +LF+QAG 
Sbjct: 96  PDEEEAVMASGEGE---EEEEEAVEEFAAEPPEEAKVYVGNLPYDVDSEGLAQLFDQAGV 152

Query: 712 VAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSR--- 542
           V VAEVIY+R +G SRGFGFVTMSTVEEA+KA+E+L+RYD++GR+L VN A+ +GSR   
Sbjct: 153 VEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEMLNRYDISGRLLNVNRASPRGSRVER 212

Query: 541 -PAARETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTE 365
            P       R YVGNLPW++D+  L +LF E+G VV+A+VV DRESGRSRGFGFV M+++
Sbjct: 213 PPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEVVNAQVVYDRESGRSRGFGFVSMASK 272

Query: 364 SEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
            E+++AIS LDGQ+L+GRP++VN A ER  R
Sbjct: 273 EELDDAISALDGQELDGRPLRVNVAAERPPR 303


>emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
          Length = 226

 Score =  236 bits (601), Expect = 1e-59
 Identities = 127/217 (58%), Positives = 160/217 (73%), Gaps = 11/217 (5%)
 Frame = -1

Query: 889 DGIVPDEEEVKGELSWET-----DENEVEGGD--TAPPEGAKVYVGNLPFDVDSQALGEL 731
           + ++  E + +G +SW +     DE  VEGG   + PPE AK++VGNLP+DVDS+ L  +
Sbjct: 8   NAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGI 67

Query: 730 FEQAGEVAVAEVIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAK 551
           F+ AG V +AEVIY+R +  SRGFGFVTMSTVEEA KAVELL+ YDM+GR LTVN AA +
Sbjct: 68  FDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPR 127

Query: 550 GSRPAAR----ETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGF 383
           GS   A     E   R+YVGNLPW++D   LE+LF E+G VVSARVVSDRE+GRSRGFGF
Sbjct: 128 GSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGF 187

Query: 382 VEMSTESEMNNAISNLDGQDLNGRPIKVNAALERQNR 272
           V MS+ESE+N+AI+ LDGQ L+GR ++VN A ER  R
Sbjct: 188 VTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 224



 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = -1

Query: 517 RIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNNAISN 338
           +++VGNLP+++D+  L  +F   G V  A V+ +RE+ RSRGFGFV MST  E   A+  
Sbjct: 49  KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 108

Query: 337 LDGQDLNGRPIKVNAALER---QNRPRF*FATRTK*SCYMPFL*WDFE 203
           L+G D++GR + VN A  R   +  PR  F    +   Y+  L WD +
Sbjct: 109 LNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCR--VYVGNLPWDVD 154


>ref|XP_006661552.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Oryza
           brachyantha]
          Length = 278

 Score =  235 bits (600), Expect = 2e-59
 Identities = 126/209 (60%), Positives = 155/209 (74%), Gaps = 5/209 (2%)
 Frame = -1

Query: 874 DEEEVKGELSWETDENEVEGG-DTAPPEGAKVYVGNLPFDVDSQALGELFEQAGEVAVAE 698
           DEE+   E S E  E+  EGG D  PPE AKVYVGNLP+D+DS+ L +LF+QAG V V+E
Sbjct: 70  DEEQPPVESSAEVAEDVEEGGEDVEPPEEAKVYVGNLPYDMDSERLAQLFDQAGVVEVSE 129

Query: 697 VIYDRMSGNSRGFGFVTMSTVEEANKAVELLSRYDMNGRILTVNIAAAKGSR----PAAR 530
           VIY+R +  SRGFGFVTMSTVEEA KAVE+  RYD+NGR+LTVN AA +G+R    P   
Sbjct: 130 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVNGRLLTVNKAAPRGARVERPPRQF 189

Query: 529 ETGHRIYVGNLPWELDNFALEELFCEYGAVVSARVVSDRESGRSRGFGFVEMSTESEMNN 350
               RIYVGNLPW++D+  L +LF E+G VV ARVV DRESGRSRGFGFV M+T+ E+++
Sbjct: 190 GPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRESGRSRGFGFVTMATQEELDD 249

Query: 349 AISNLDGQDLNGRPIKVNAALERQNRPRF 263
           AI+ LDGQ L+GR ++VN A ER  R  F
Sbjct: 250 AIAALDGQSLDGRALRVNVAEERPPRRGF 278