BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00000868
         (585 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   174   2e-41
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   162   5e-38
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   153   4e-35
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       148   9e-34
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   147   2e-33
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       147   2e-33
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...   146   5e-33
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   145   6e-33
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   144   2e-32
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   141   1e-31
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   140   2e-31
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   140   2e-31
gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Sola...   140   2e-31
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   140   3e-31
gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solan...   137   2e-30
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   137   2e-30
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   137   2e-30
gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum de...   137   2e-30
gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solan...   137   2e-30
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   136   4e-30

>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  174 bits (440), Expect = 2e-41
 Identities = 92/152 (60%), Positives = 108/152 (71%), Gaps = 4/152 (2%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           MRKTLHVSGFP L +AE ++ FLE  +  G IEALE+KPGKRG R YAKVQFT    A  
Sbjct: 1   MRKTLHVSGFPKLIAAEEVRKFLEGHTCEGAIEALEVKPGKRGSRAYAKVQFTSKEDADK 60

Query: 321 IIDLCKSGLFY----NGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLW 488
           II L   GL+Y    + SYLKAFEQD NFV N R+   E++G+TLNFGCQ+S+DRFSVLW
Sbjct: 61  IIHLANIGLYYYLGNSRSYLKAFEQDTNFV-NHRSFMHELDGLTLNFGCQVSKDRFSVLW 119

Query: 489 KATDVDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           +A DV V FG+ L KM   +    VEYRLQLS
Sbjct: 120 RAADVSVKFGSSLNKMHLFVCDDLVEYRLQLS 151


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  162 bits (411), Expect = 5e-38
 Identities = 83/148 (56%), Positives = 102/148 (68%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M +T+ V GFP L +AE +K FLE  +G GT+ ALE+K  K G R YA+VQFT+ R A+ 
Sbjct: 1   MGRTIQVFGFPYLVAAELVKKFLENYTGEGTVIALEVKTAKVGRRAYARVQFTNIRCAET 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           IIDL K+ L+Y  SYLKA+E D + V NPRT   EM  +TLNFGCQIS  +FSVLWK   
Sbjct: 61  IIDLAKNRLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKGES 120

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V V FG  +KKM F L H  VEY++QLS
Sbjct: 121 VTVKFGTGMKKMHFFLRHNSVEYKMQLS 148


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  153 bits (386), Expect = 4e-35
 Identities = 79/149 (53%), Positives = 103/149 (69%), Gaps = 1/149 (0%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPR-TYAKVQFTDSRYAK 317
           M KT+ V GFP++ SA+ IK FLE  +G GTIEALE+K  + G   T+AKVQFT    A+
Sbjct: 1   MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60

Query: 318 MIIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKAT 497
            II LCK  ++Y  +YLKA E D + +P PR     M+ ITL+FGCQ+S++RF VLWKA 
Sbjct: 61  FIITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAI 120

Query: 498 DVDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           +V V FG+ L+K  F LSHG  EY+L+LS
Sbjct: 121 NVSVKFGSGLRKFYFFLSHGSEEYKLELS 149


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  148 bits (374), Expect = 9e-34
 Identities = 78/148 (52%), Positives = 102/148 (68%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +K FLE  +G GT+ ALE+K  K G R +AKVQF +++ A+ 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           IIDL   GL+Y  SYLKA+E   + V  PRT  + M+G+TLNFGCQIS+ +F+VL  + D
Sbjct: 61  IIDLASKGLYYGPSYLKAWEMKTDIV-QPRTYVEHMDGVTLNFGCQISDKKFAVL-GSKD 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK+ F LSH   +Y+LQLS
Sbjct: 119 VSIKFGIGLKKIYFFLSHASADYKLQLS 146


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  147 bits (371), Expect = 2e-33
 Identities = 76/147 (51%), Positives = 99/147 (67%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ VS FP+   AE +K+FLE  +G  T+ AL+++  K G R YA VQFT S  A++
Sbjct: 1   MGKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAEL 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II L    L+Y  SYLKA E +N+ VP PRT    M G+TL+FGCQ+S ++F VLW+  D
Sbjct: 61  IIRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVD 120

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQL 581
           V V FG  ++K+QFLLSH  VEYRL L
Sbjct: 121 VTVNFGMGMRKLQFLLSHHCVEYRLDL 147


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  147 bits (371), Expect = 2e-33
 Identities = 77/148 (52%), Positives = 105/148 (70%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +K+FLE  +G GT+ ALE+K  K G R++A+VQF  ++ A++
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRSFARVQFASNKSAEL 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           IIDL   GL+Y  SYLKA+E + + V  PRT    M+G+TLNFGCQIS+ +F+VL  + D
Sbjct: 61  IIDLASMGLYYGPSYLKAWEMNTDIV-QPRTYVQHMDGVTLNFGCQISDKKFAVL-GSKD 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK+ F LS+G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKIYFFLSYGSSDYKLQLS 146


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score =  146 bits (368), Expect = 5e-33
 Identities = 76/148 (51%), Positives = 104/148 (70%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +K+FLE  +G GT+ ALE+K  K G R +AKVQF +++ A++
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEL 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           I+DL   GL+Y  SYL+A+E   + V  PRT    M+G+TLNFGCQIS+ +F+VL  + D
Sbjct: 61  IMDLASEGLYYGPSYLQAWEMKTDIV-QPRTYVQHMDGVTLNFGCQISDKKFAVL-GSKD 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK+ F LS+G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKIYFFLSYGSTDYKLQLS 146


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score =  145 bits (367), Expect = 6e-33
 Identities = 76/148 (51%), Positives = 102/148 (68%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +K+FLE  +G GT+ ALE+K  K G R +AKVQF +++ A++
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEI 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           IIDL   GL+Y  SYLKA+E    ++  PRT    M+G+TLNFGCQIS+ +F+VL     
Sbjct: 61  IIDLASKGLYYGPSYLKAWEM-KTYIVQPRTYVQHMDGVTLNFGCQISDKKFAVLGSKV- 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK+ F LS+G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKIYFFLSYGSTDYKLQLS 146


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  144 bits (363), Expect = 2e-32
 Identities = 81/149 (54%), Positives = 100/149 (67%), Gaps = 1/149 (0%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRG-PRTYAKVQFTDSRYAK 317
           M KT+ V G P+  SA  IK FLE  +G GTIEALE+K  K G   T+AKVQFT  R A+
Sbjct: 1   MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60

Query: 318 MIIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKAT 497
           +II L K  L+Y G+YLKA E D + +P PRT    M+ ITL+FG Q+S +RF VLWKA 
Sbjct: 61  LIISLAKQ-LWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAI 119

Query: 498 DVDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           +V V FG  L+K  F LSHG  EY+L+LS
Sbjct: 120 NVSVKFGFGLRKFYFFLSHGSEEYKLELS 148


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  141 bits (355), Expect = 1e-31
 Identities = 78/148 (52%), Positives = 99/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E   + V   R   D M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 61  IINLASKRLYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISDDKFAVL-GSTE 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK  F LS G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKFFFFLSSGSADYKLQLS 146


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  140 bits (354), Expect = 2e-31
 Identities = 78/148 (52%), Positives = 99/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVYGFPYLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E   + V   R   D M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 61  IINLASKRLYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISDDKFAVL-GSTE 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK  F LS G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKFFFFLSSGSADYKLQLS 146


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  140 bits (354), Expect = 2e-31
 Identities = 79/148 (53%), Positives = 98/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +K FLE  +G GTI ALE+K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVFGFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E   + V   R   D M+GITLNFGCQISED+F+VL  +T+
Sbjct: 61  IINLASKRLYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISEDKFAVL-GSTE 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK  F LS G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKFFFFLSSGSADYKLQLS 146


>gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Solanum demissum]
          Length = 190

 Score =  140 bits (354), Expect = 2e-31
 Identities = 79/148 (53%), Positives = 98/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +K FLE  +G GTI ALE+K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVFGFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E   + V   R   D M+GITLNFGCQISED+F+VL  +T+
Sbjct: 61  IINLASKRLYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISEDKFAVL-GSTE 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK  F LS G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKFFFFLSSGSADYKLQLS 146


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  140 bits (353), Expect = 3e-31
 Identities = 78/148 (52%), Positives = 100/148 (67%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVFGFPYLLSAEVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II L  + L++  SYLKA+E   + V   R   D+M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 61  IITLANNRLYFGSSYLKAWEMKTDIV-QLRAYVDQMDGITLNFGCQISDDKFAVL-GSTE 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK  F LS G  +Y+LQLS
Sbjct: 119 VSIQFGIGLKKFFFFLSSGSADYKLQLS 146


>gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solanum tuberosum]
          Length = 274

 Score =  137 bits (346), Expect = 2e-30
 Identities = 77/162 (47%), Positives = 106/162 (65%)
 Frame = +3

Query: 99  IELQLPLDIHFVVKMRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRT 278
           ++++L L+  +   M KT+ V GFP L  AE +KSFLE  +G GT+ AL++K  K G R 
Sbjct: 75  LKVELHLEFGY---MGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRA 131

Query: 279 YAKVQFTDSRYAKMIIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQ 458
           +AKVQF D+  A  II+L    L++  SYLKA+E   + V       D M+GITLNFGCQ
Sbjct: 132 FAKVQFVDNISADKIINLASKRLYFGSSYLKAWEMKTDIVQVAYV--DHMDGITLNFGCQ 189

Query: 459 ISEDRFSVLWKATDVDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           IS+D+F+VL  +T+V + FG  LKK+ F LS G  +Y+LQLS
Sbjct: 190 ISDDKFAVL-GSTEVSIKFGIGLKKIYFFLSRGSADYKLQLS 230


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
           tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 1115

 Score =  137 bits (345), Expect = 2e-30
 Identities = 77/148 (52%), Positives = 98/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA E + + V       D M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 61  IINLASKRLYFGSSYLKAREMETDLV-QLWEYVDHMDGITLNFGCQISDDKFAVL-GSTE 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK  F LS G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKKFFFFLSSGSADYKLQLS 146


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  137 bits (345), Expect = 2e-30
 Identities = 75/148 (50%), Positives = 98/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L  AE +KSFLE  +G GT+ AL++K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFVDNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E   + V       D M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 61  IINLASKRLYFGSSYLKAWEMKTDIVQVAYV--DHMDGITLNFGCQISDDKFAVL-GSTE 117

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK+ F LS G  +Y+LQLS
Sbjct: 118 VSIKFGIGLKKIYFFLSRGSADYKLQLS 145


>gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 241

 Score =  137 bits (345), Expect = 2e-30
 Identities = 75/148 (50%), Positives = 98/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L  AE +KSFLE  +G GT+ AL++K  K G R +AKVQF D+  A  
Sbjct: 66  MGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFVDNISADK 125

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E   + V       D M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 126 IINLASKRLYFGSSYLKAWEMKTDIVQVAYV--DHMDGITLNFGCQISDDKFAVL-GSTE 182

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK+ F LS G  +Y+LQLS
Sbjct: 183 VSIKFGIGLKKIYFFLSRGSADYKLQLS 210


>gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 215

 Score =  137 bits (345), Expect = 2e-30
 Identities = 75/148 (50%), Positives = 98/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L  AE +KSFLE  +G GT+ AL++K  K G R +AKVQF D+  A  
Sbjct: 27  MGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFVDNISADK 86

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E   + V       D M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 87  IINLASKRLYFGSSYLKAWEMKTDIVQVAYV--DHMDGITLNFGCQISDDKFAVL-GSTE 143

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LKK+ F LS G  +Y+LQLS
Sbjct: 144 VSIKFGIGLKKIYFFLSRGSADYKLQLS 171


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  136 bits (343), Expect = 4e-30
 Identities = 76/148 (51%), Positives = 98/148 (66%)
 Frame = +3

Query: 141 MRKTLHVSGFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKRGPRTYAKVQFTDSRYAKM 320
           M KT+ V GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  
Sbjct: 1   MGKTIQVYGFPRLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 321 IIDLCKSGLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATD 500
           II+L    L++  SYLKA+E + + V       D M+GITLNFGCQIS+D+F+VL  +T+
Sbjct: 61  IINLASKRLYFGSSYLKAWELETDIV-QLWAYVDHMDGITLNFGCQISDDKFAVL-GSTE 118

Query: 501 VDVVFGAKLKKMQFLLSHGEVEYRLQLS 584
           V + FG  LK   F LS G  +Y+LQLS
Sbjct: 119 VSIKFGIGLKNFFFFLSSGSADYKLQLS 146