BLASTX nr result
ID: Mentha26_contig00000340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00000340
(1001 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus... 279 1e-72
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s... 241 4e-61
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c... 240 8e-61
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera] 237 6e-60
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 236 1e-59
ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 235 2e-59
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 235 2e-59
ref|XP_007028003.1| Chloroplast RNA-binding protein 33 [Theobrom... 234 3e-59
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 234 4e-59
ref|XP_006481614.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 234 5e-59
ref|XP_006430047.1| hypothetical protein CICLE_v10012204mg [Citr... 234 5e-59
gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlise... 233 7e-59
ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 233 9e-59
ref|XP_002309257.2| hypothetical protein POPTR_0006s21650g [Popu... 227 5e-57
ref|XP_006403809.1| hypothetical protein EUTSA_v10010548mg [Eutr... 225 2e-56
ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 224 6e-56
ref|XP_002322776.1| 33 kDa ribonucleoprotein [Populus trichocarp... 224 6e-56
ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis... 223 1e-55
gb|EXC12983.1| 33 kDa ribonucleoprotein [Morus notabilis] 222 2e-55
gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis ... 222 2e-55
>gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus guttatus]
Length = 328
Score = 279 bits (714), Expect = 1e-72
Identities = 150/232 (64%), Positives = 171/232 (73%), Gaps = 17/232 (7%)
Frame = +2
Query: 92 HCASTAFDGVELDQXXXXXXXXXXXXXXXXXXXXVAE--ENGAPQIADAGRLYVGNLPFT 265
+CASTAFD VEL+Q ++E + GA +GRLY GNLPF+
Sbjct: 67 YCASTAFDSVELNQEDVDDDDDEDEEEDIDEEETLSEIQDEGADVSQPSGRLYAGNLPFS 126
Query: 266 MTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX---------------GAQIGGRT 400
MTSAQLSEIFAEAGRVVS E+VYDRVTDR GAQIGGRT
Sbjct: 127 MTSAQLSEIFAEAGRVVSVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGAQIGGRT 186
Query: 401 SRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAGNLSWSLTSQALRDAFSQLPGYL 580
++VN PEVPRGGEREVM+PKIRSSYQG+VDSPYKIYAGNLSW+LTSQ LRD FSQ PG+L
Sbjct: 187 AKVNIPEVPRGGEREVMSPKIRSSYQGFVDSPYKIYAGNLSWNLTSQILRDTFSQQPGFL 246
Query: 581 SAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLELEGRPLRLNPAEQR 736
SAKVIYDR+SGR RGFGFITFSSAE+V+SA+ A++GLELEGRPLRLN +EQR
Sbjct: 247 SAKVIYDRDSGRSRGFGFITFSSAEDVQSAMDALNGLELEGRPLRLNLSEQR 298
>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 241 bits (614), Expect = 4e-61
Identities = 123/194 (63%), Positives = 148/194 (76%), Gaps = 15/194 (7%)
Frame = +2
Query: 200 EENGAPQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX- 376
EE+ + + GRLYVGNLPF+MTS+QLSEIFAEAG V + E+VYDRVTDR
Sbjct: 98 EESVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTM 157
Query: 377 --------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAG 514
G+Q+GGRT +VNFPEVPRGGEREVM+ KIRS+YQG+VDSP+K+Y
Sbjct: 158 GSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVA 217
Query: 515 NLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLE 694
NLSW+LTSQ LRDAF+ PG++SAKVIYDR+SGR RGFGFITFSSAE ++SAL M+ +E
Sbjct: 218 NLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVE 277
Query: 695 LEGRPLRLNPAEQR 736
LEGRPLRLN A Q+
Sbjct: 278 LEGRPLRLNVAGQK 291
>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
precursor - common tobacco gi|20005|emb|CAA37879.1|
unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 240 bits (612), Expect = 8e-61
Identities = 123/194 (63%), Positives = 146/194 (75%), Gaps = 15/194 (7%)
Frame = +2
Query: 200 EENGAPQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX- 376
EE + + GRLYVGNLPF+MTS+QLSEIFAEAG V + E+VYDRVTDR
Sbjct: 103 EERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTM 162
Query: 377 --------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAG 514
G+Q+GGRT +VNFPEVPRGGEREVM+ KIRS+YQG+VDSP+K+Y
Sbjct: 163 GSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVA 222
Query: 515 NLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLE 694
NLSW+LTSQ LRDAF+ PG++SAKVIYDR+SGR RGFGFITFSSAE + SAL M+ +E
Sbjct: 223 NLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVE 282
Query: 695 LEGRPLRLNPAEQR 736
LEGRPLRLN A Q+
Sbjct: 283 LEGRPLRLNVAGQK 296
>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 237 bits (604), Expect = 6e-60
Identities = 122/197 (61%), Positives = 145/197 (73%), Gaps = 18/197 (9%)
Frame = +2
Query: 200 EENGAPQIAD---AGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
EE P+++D A RLYVGNLP++MTS+QL +F EAG V+S E+VYDRVTDR
Sbjct: 232 EEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAF 291
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
G+Q+GGRT +VNFPEVPRGGER VM PKIRSSY+G+VDSPYKI
Sbjct: 292 VTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKI 351
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
YAGNLSW LTS+ LRDAF+ PG L AKVIY+R SGR RGFGF++F+SAEN ESAL AM+
Sbjct: 352 YAGNLSWRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMB 411
Query: 686 GLELEGRPLRLNPAEQR 736
+E+EGRPLRLN A R
Sbjct: 412 EVEVEGRPLRLNLAAVR 428
>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 236 bits (602), Expect = 1e-59
Identities = 122/197 (61%), Positives = 146/197 (74%), Gaps = 18/197 (9%)
Frame = +2
Query: 200 EENGAPQIAD---AGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
EE P+++D A RLYVGNLP++MTS+QL ++F EAG V+S E+VYDRVTDR
Sbjct: 89 EEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAF 148
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
G+Q+GGRT +VNFPEVPRGGER VM PKIRSSY+G+VDSPYKI
Sbjct: 149 VTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKI 208
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
YAGNLSW LTS+ LRDAF+ PG L AKVIY+R SGR RGFGF++F+SAEN ESAL AM+
Sbjct: 209 YAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMN 268
Query: 686 GLELEGRPLRLNPAEQR 736
+E+EGRPLRLN A R
Sbjct: 269 EVEVEGRPLRLNLAAVR 285
>ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 328
Score = 235 bits (600), Expect = 2e-59
Identities = 122/197 (61%), Positives = 148/197 (75%), Gaps = 18/197 (9%)
Frame = +2
Query: 200 EENGA---PQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
EE+G P+ + GRLYVGNLPF+MT +QLSEIFAEAG+V + E+VYDRVTDR
Sbjct: 112 EEDGVVDEPKSIEDGRLYVGNLPFSMTPSQLSEIFAEAGKVANVEIVYDRVTDRSRGFAF 171
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
G+Q+GGRT +VNFPEVPRGGER+VM+ KIRS+YQG+VDSP+K+
Sbjct: 172 VTMGSVEDAKEAVRLFDGSQVGGRTVKVNFPEVPRGGERQVMSAKIRSTYQGFVDSPHKL 231
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
Y NLSW+LTSQ L+DAF+ PG+LSAKVIYDR SGR RGFGFITFSSAE + +AL M+
Sbjct: 232 YVANLSWNLTSQGLKDAFADQPGFLSAKVIYDRASGRSRGFGFITFSSAEAMNNALDTMN 291
Query: 686 GLELEGRPLRLNPAEQR 736
++LEGRPLRLN A QR
Sbjct: 292 EVDLEGRPLRLNIAGQR 308
>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 235 bits (600), Expect = 2e-59
Identities = 123/227 (54%), Positives = 151/227 (66%), Gaps = 15/227 (6%)
Frame = +2
Query: 92 HCASTAFDGVELDQXXXXXXXXXXXXXXXXXXXXVAEENGAPQIADAGRLYVGNLPFTMT 271
HCA AFD +E+ +E +AG+LY+GNLP+ MT
Sbjct: 70 HCAPPAFDELEISDPETEYGHIQESDGEEETQEE--DEQKVSVSREAGKLYIGNLPYAMT 127
Query: 272 SAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX---------------GAQIGGRTSR 406
S+QLSE+FAEAG VVS +V+YD+VTDR G+QIGGRT R
Sbjct: 128 SSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVR 187
Query: 407 VNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAGNLSWSLTSQALRDAFSQLPGYLSA 586
VNFPEVPRGGE+EVM P+IRSSY +VDSP+KIYAGNL W LTSQ+LRDAF PG LSA
Sbjct: 188 VNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSA 247
Query: 587 KVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLELEGRPLRLNPA 727
K+IYDR SG+ RGFGF++F +AE+ ESAL +M+G+E+EGRPLRLN A
Sbjct: 248 KIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIA 294
>ref|XP_007028003.1| Chloroplast RNA-binding protein 33 [Theobroma cacao]
gi|508716608|gb|EOY08505.1| Chloroplast RNA-binding
protein 33 [Theobroma cacao]
Length = 340
Score = 234 bits (598), Expect = 3e-59
Identities = 124/233 (53%), Positives = 152/233 (65%), Gaps = 18/233 (7%)
Frame = +2
Query: 92 HCASTAFDG---VELDQXXXXXXXXXXXXXXXXXXXXVAEENGAPQIADAGRLYVGNLPF 262
HC + +FD E D+ EE + + GRLYVGNLP+
Sbjct: 80 HCFAASFDSFLVTEDDRSPGEEYPESPNVEEPPQQEEAEEEKISESGGEEGRLYVGNLPY 139
Query: 263 TMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX---------------GAQIGGR 397
+MTS++LSEIF EAGRV + E+VYDRVTDR G+Q+GGR
Sbjct: 140 SMTSSELSEIFNEAGRVANVEIVYDRVTDRSRGFAFVTMASVDDAKEAIRLFDGSQVGGR 199
Query: 398 TSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAGNLSWSLTSQALRDAFSQLPGY 577
T +VNFPEVPRGGEREVM PKIR Y+ ++DSPYKIYAGNL W +TSQ LRDAF+ PG
Sbjct: 200 TVKVNFPEVPRGGEREVMGPKIRRGYKSFLDSPYKIYAGNLGWGVTSQGLRDAFASQPGL 259
Query: 578 LSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLELEGRPLRLNPAEQR 736
LSAKVIY+R++GR RGFGF++F SAE VE+AL AM+G+E+EGRPLRLN A R
Sbjct: 260 LSAKVIYERDTGRSRGFGFVSFESAETVEAALNAMNGVEVEGRPLRLNMAADR 312
>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 318
Score = 234 bits (597), Expect = 4e-59
Identities = 116/185 (62%), Positives = 145/185 (78%), Gaps = 15/185 (8%)
Frame = +2
Query: 227 DAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX---------- 376
DAGRLYVGNLPF++TS+QL+EIFAEAG VVS E+VYDRVTDR
Sbjct: 106 DAGRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYDRVTDRSRGFAFVTMKSVEEAKEA 165
Query: 377 -----GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAGNLSWSLTSQ 541
G+QIGGR+++VNFPEVP+GGER VM K+RS+Y+G+VDSP+KIYAGNL W L SQ
Sbjct: 166 IRMFDGSQIGGRSAKVNFPEVPKGGERLVMGKKVRSAYKGFVDSPHKIYAGNLGWGLNSQ 225
Query: 542 ALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLELEGRPLRLN 721
LRDAF++ PG L AKVIY+R++GR RGFGF+TF +AEN+E+AL AM+G+E++GRPLRLN
Sbjct: 226 ELRDAFAEQPGLLGAKVIYERDNGRSRGFGFVTFETAENLEAALNAMNGVEVQGRPLRLN 285
Query: 722 PAEQR 736
A +R
Sbjct: 286 LASER 290
Score = 64.7 bits (156), Expect = 6e-08
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = +2
Query: 488 DSPYKIYAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVES 667
D ++Y GNL +S+TS L + F++ +S +++YDR + R RGF F+T S E +
Sbjct: 105 DDAGRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYDRVTDRSRGFAFVTMKSVEEAKE 164
Query: 668 ALAAMDGLELEGRPLRLN 721
A+ DG ++ GR ++N
Sbjct: 165 AIRMFDGSQIGGRSAKVN 182
>ref|XP_006481614.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 323
Score = 234 bits (596), Expect = 5e-59
Identities = 119/197 (60%), Positives = 147/197 (74%), Gaps = 18/197 (9%)
Frame = +2
Query: 200 EENGAPQIA---DAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
EE P++A +A RLYVGNLP++MTS+ L+E+FAEAG V SAE+VYDRVTDR
Sbjct: 99 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
G+QIGGRT +VNFPEVPRGGER M PK+++SYQG+VDSP+KI
Sbjct: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
YAGNL W LTSQ LRDAF PG LSAKVI++R +GR RGFGF+TF +AE+++SAL AM+
Sbjct: 219 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 278
Query: 686 GLELEGRPLRLNPAEQR 736
G+E+EGRPLRLN A +R
Sbjct: 279 GVEVEGRPLRLNMANER 295
>ref|XP_006430047.1| hypothetical protein CICLE_v10012204mg [Citrus clementina]
gi|557532104|gb|ESR43287.1| hypothetical protein
CICLE_v10012204mg [Citrus clementina]
Length = 322
Score = 234 bits (596), Expect = 5e-59
Identities = 119/197 (60%), Positives = 147/197 (74%), Gaps = 18/197 (9%)
Frame = +2
Query: 200 EENGAPQIA---DAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
EE P++A +A RLYVGNLP++MTS+ L+E+FAEAG V SAE+VYDRVTDR
Sbjct: 98 EEEEEPKVAASDEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 157
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
G+QIGGRT +VNFPEVPRGGER M PK+++SYQG+VDSP+KI
Sbjct: 158 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 217
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
YAGNL W LTSQ LRDAF PG LSAKVI++R +GR RGFGF+TF +AE+++SAL AM+
Sbjct: 218 YAGNLGWGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMN 277
Query: 686 GLELEGRPLRLNPAEQR 736
G+E+EGRPLRLN A +R
Sbjct: 278 GVEVEGRPLRLNMANER 294
>gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlisea aurea]
Length = 204
Score = 233 bits (595), Expect = 7e-59
Identities = 121/194 (62%), Positives = 146/194 (75%), Gaps = 15/194 (7%)
Frame = +2
Query: 200 EENGAPQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX- 376
EE G P ++AGRLYVGNLPF++TSAQLSEIF+EAG VVS E+VYDRVTDR
Sbjct: 3 EEGGIP--SEAGRLYVGNLPFSITSAQLSEIFSEAGGVVSVEIVYDRVTDRSRGFGFVTM 60
Query: 377 --------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAG 514
+QIGGRT++VNFPEVPRGGEREV+ KIR+ QG++DSP+KIYAG
Sbjct: 61 SSVDEAKEAIRLFDQSQIGGRTAKVNFPEVPRGGEREVLRSKIRAGNQGFIDSPHKIYAG 120
Query: 515 NLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLE 694
NLSWSL SQ L +AF+ PG+LSAKVI+DR SGR RGFGF+TFSS++ SAL M+G E
Sbjct: 121 NLSWSLRSQGLGEAFADQPGFLSAKVIFDRESGRSRGFGFVTFSSSQEANSALNTMNGTE 180
Query: 695 LEGRPLRLNPAEQR 736
+EGRPL+L+ AEQR
Sbjct: 181 IEGRPLKLDLAEQR 194
>ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 329
Score = 233 bits (594), Expect = 9e-59
Identities = 121/197 (61%), Positives = 146/197 (74%), Gaps = 18/197 (9%)
Frame = +2
Query: 200 EENGA---PQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
E NG P+ + GRLYVGNLPF+MT +QLSEIF EAG+V + E+VYDRVTDR
Sbjct: 108 EGNGVVDEPKSIEDGRLYVGNLPFSMTPSQLSEIFTEAGKVANVEIVYDRVTDRSRGFAF 167
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
G+Q+GGRT +VNFPEVPRGGEREVM+ KIRS+YQG+VDSP+K+
Sbjct: 168 VTMGSVEEAEEAVRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKL 227
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
Y NLSW+LTSQ L+DAF+ PG+LSAKVIYDR SGR RGFGFITFSSAE + +AL M+
Sbjct: 228 YVANLSWNLTSQGLKDAFADQPGFLSAKVIYDRASGRSRGFGFITFSSAEAMNNALDTMN 287
Query: 686 GLELEGRPLRLNPAEQR 736
++LEGRPLRLN A Q+
Sbjct: 288 EVDLEGRPLRLNIAGQK 304
>ref|XP_002309257.2| hypothetical protein POPTR_0006s21650g [Populus trichocarpa]
gi|550336813|gb|EEE92780.2| hypothetical protein
POPTR_0006s21650g [Populus trichocarpa]
Length = 326
Score = 227 bits (579), Expect = 5e-57
Identities = 116/199 (58%), Positives = 145/199 (72%), Gaps = 18/199 (9%)
Frame = +2
Query: 194 VAEENG---APQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXX 364
+ EE G A + + G+LYVGNLP++MTS++L+E+F EAGRV SAEV+YDRVTDR
Sbjct: 102 IVEEEGDVEAIKATEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGF 161
Query: 365 XXXX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPY 499
G Q GGR+ RVNFPEVPRGGEREVM P+I+S Y+G++DS +
Sbjct: 162 GFVTMGSVEEAKKAIQMFNGTQFGGRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEH 221
Query: 500 KIYAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAA 679
KIYAGNL W LTS+ LRDAF+ PG LSAKVIY+R+S R RGFGF++F SAEN E+AL A
Sbjct: 222 KIYAGNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEA 281
Query: 680 MDGLELEGRPLRLNPAEQR 736
M+G E+EGRP+RLN A +R
Sbjct: 282 MNGEEVEGRPMRLNLAGER 300
>ref|XP_006403809.1| hypothetical protein EUTSA_v10010548mg [Eutrema salsugineum]
gi|557104928|gb|ESQ45262.1| hypothetical protein
EUTSA_v10010548mg [Eutrema salsugineum]
Length = 322
Score = 225 bits (574), Expect = 2e-56
Identities = 115/194 (59%), Positives = 142/194 (73%), Gaps = 15/194 (7%)
Frame = +2
Query: 200 EENGAPQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX- 376
E+ A + GRLYVGNLP+T+TS++LSE+F EAG VV ++VYD+VTDR
Sbjct: 100 EKPTAQASGEEGRLYVGNLPYTITSSELSELFGEAGNVVDVQIVYDKVTDRSRGFGFVTM 159
Query: 377 --------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAG 514
+QIGGRT +VNFPEVPRGGEREVM KIR + + YVDSP+KIYAG
Sbjct: 160 GSIEEAKEAIQMFNSSQIGGRTVKVNFPEVPRGGEREVMRTKIRDTNRSYVDSPHKIYAG 219
Query: 515 NLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLE 694
NL WSLTSQ L+DAF+ PG L AKVIY+RNSGR RGFGFI+F SA++V+SAL+AM+G+E
Sbjct: 220 NLGWSLTSQGLKDAFADQPGVLGAKVIYERNSGRSRGFGFISFESAQDVQSALSAMNGVE 279
Query: 695 LEGRPLRLNPAEQR 736
+EGR LRLN A +R
Sbjct: 280 VEGRALRLNLASER 293
>ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like isoform X1
[Glycine max]
Length = 314
Score = 224 bits (570), Expect = 6e-56
Identities = 118/227 (51%), Positives = 151/227 (66%), Gaps = 15/227 (6%)
Frame = +2
Query: 101 STAFDGVELDQXXXXXXXXXXXXXXXXXXXXVAEENGAPQIADAGRLYVGNLPFTMTSAQ 280
S AFDG E+ Q EE DAGRLYVGNLP+++T++
Sbjct: 62 SAAFDGFEVAQDTTEFQQDEPETEPVEKTEQ-EEEQKVSDSYDAGRLYVGNLPYSITNSA 120
Query: 281 LSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX---------------GAQIGGRTSRVNF 415
L+E+F EAG V S E++YDRVTDR G+Q+GGRT +VNF
Sbjct: 121 LAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIRMFDGSQVGGRTVKVNF 180
Query: 416 PEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAGNLSWSLTSQALRDAFSQLPGYLSAKVI 595
PEVP+GGER VM KIR+SY+G+VDSP+KIYAGNL W LTSQ LR+AF++ PG LSAKVI
Sbjct: 181 PEVPKGGERLVMGSKIRNSYRGFVDSPHKIYAGNLGWGLTSQGLREAFAEQPGVLSAKVI 240
Query: 596 YDRNSGRPRGFGFITFSSAENVESALAAMDGLELEGRPLRLNPAEQR 736
Y+R+SGR RGFGF++F +AE+ ++AL M+G+E++GRPLRLN AE R
Sbjct: 241 YERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLNLAEAR 287
>ref|XP_002322776.1| 33 kDa ribonucleoprotein [Populus trichocarpa]
gi|222867406|gb|EEF04537.1| 33 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 324
Score = 224 bits (570), Expect = 6e-56
Identities = 113/194 (58%), Positives = 143/194 (73%), Gaps = 15/194 (7%)
Frame = +2
Query: 200 EENGAPQIADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX- 376
E+ A + + G+LYVGNLP++MTS++L+E+F EAGRV AEV+ DRVTDR
Sbjct: 105 EDVVAIKAREEGKLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTM 164
Query: 377 --------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAG 514
G+Q+GGRT RVNFPEVPRGGEREVM P+IRS Y+G++DS +KIYAG
Sbjct: 165 ESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAG 224
Query: 515 NLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLE 694
NL W LTS+ L DAF+ PG LSAKVIY+R++GR RGFGF++F SAEN E+AL AM+G E
Sbjct: 225 NLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEE 284
Query: 695 LEGRPLRLNPAEQR 736
++GRPLRLN A +R
Sbjct: 285 VDGRPLRLNLAGER 298
>ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33
[Arabidopsis thaliana] gi|4886289|emb|CAB43448.1|
RNA-binding protein cp33 precursor [Arabidopsis
thaliana] gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240
[Arabidopsis thaliana] gi|18700226|gb|AAL77723.1|
AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33
[Arabidopsis thaliana] gi|332645419|gb|AEE78940.1|
chloroplast RNA-binding protein 33 [Arabidopsis
thaliana]
Length = 329
Score = 223 bits (567), Expect = 1e-55
Identities = 115/197 (58%), Positives = 141/197 (71%), Gaps = 16/197 (8%)
Frame = +2
Query: 194 VAEENGAPQIA-DAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
V EE Q + + GRLYVGNLP+T+TS++LS+IF EAG VV ++VYD+VTDR
Sbjct: 102 VEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGF 161
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
+QIGGRT +VNFPEVPRGGE EVM KIR + + YVDSP+K+
Sbjct: 162 VTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKV 221
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
YAGNL W+LTSQ L+DAF PG L AKVIY+RN+GR RGFGFI+F SAENV+SALA M+
Sbjct: 222 YAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMN 281
Query: 686 GLELEGRPLRLNPAEQR 736
G+E+EGR LRLN A +R
Sbjct: 282 GVEVEGRALRLNLASER 298
>gb|EXC12983.1| 33 kDa ribonucleoprotein [Morus notabilis]
Length = 325
Score = 222 bits (566), Expect = 2e-55
Identities = 110/185 (59%), Positives = 139/185 (75%), Gaps = 15/185 (8%)
Frame = +2
Query: 227 DAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXXXX---------- 376
+ GRLYVGNLP++M S+QL+++F EAG V S EV+YDRVTDR
Sbjct: 113 EGGRLYVGNLPYSMDSSQLAQVFGEAGTVFSVEVIYDRVTDRSRGFGFVTMGSVEEAQEA 172
Query: 377 -----GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKIYAGNLSWSLTSQ 541
G+Q+GGRT +VNFP+VPRGGEREV+ PKIR+ +GYVDSP+KIYAGNL W LTSQ
Sbjct: 173 IRLFDGSQVGGRTVKVNFPQVPRGGEREVLGPKIRNMNKGYVDSPHKIYAGNLGWGLTSQ 232
Query: 542 ALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMDGLELEGRPLRLN 721
LRDAF+ PG LSAKVIY+R++GR RGFGF++F +AE +SAL AM+G+E++GRPLRLN
Sbjct: 233 DLRDAFADQPGVLSAKVIYERDTGRSRGFGFVSFETAEASQSALDAMNGVEVQGRPLRLN 292
Query: 722 PAEQR 736
A +R
Sbjct: 293 MATER 297
>gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 222 bits (566), Expect = 2e-55
Identities = 115/197 (58%), Positives = 140/197 (71%), Gaps = 16/197 (8%)
Frame = +2
Query: 194 VAEENGAPQIA-DAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEVVYDRVTDRXXXXXX 370
V EE Q + + GRLYVGNLP+T+TS++LS+IF EAG VV ++VYD+VTDR
Sbjct: 102 VEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGF 161
Query: 371 XX---------------GAQIGGRTSRVNFPEVPRGGEREVMNPKIRSSYQGYVDSPYKI 505
+QIGGRT +VNFPEVPRGGE EVM KIR + + YVDSP+K+
Sbjct: 162 VTMGSIEEAKGAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKV 221
Query: 506 YAGNLSWSLTSQALRDAFSQLPGYLSAKVIYDRNSGRPRGFGFITFSSAENVESALAAMD 685
YAGNL W LTSQ L+DAF PG L AKVIY+RN+GR RGFGFI+F SAENV+SALA M+
Sbjct: 222 YAGNLGWDLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMN 281
Query: 686 GLELEGRPLRLNPAEQR 736
G+E+EGR LRLN A +R
Sbjct: 282 GVEVEGRALRLNLASER 298