BLASTX nr result

ID: Mentha25_contig00058672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00058672
         (430 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               64   2e-08
ref|XP_006355902.1| PREDICTED: uncharacterized protein LOC102590...    60   2e-07
ref|XP_004247308.1| PREDICTED: uncharacterized protein LOC101253...    60   3e-07
ref|XP_004231529.1| PREDICTED: uncharacterized protein LOC101255...    58   1e-06

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = -3

Query: 419 QWDQIYLSDSNASKIRGKSWPLFEGWKEVFGKDRATGENAEDVMDAVNDLM 267
           +WD++   +  AS +  K WPLF  W+E FGKDRATGE+AE  +DAV D++
Sbjct: 113 KWDKLLKDEPGASNMNTKKWPLFADWEEFFGKDRATGEHAEGPLDAVEDIL 163


>ref|XP_006355902.1| PREDICTED: uncharacterized protein LOC102590554 [Solanum tuberosum]
          Length = 370

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
 Frame = -3

Query: 416 WDQIYLSDSNASKIRGKSWPLFEGWKEVFGKDRATGENAEDVMDAVNDLMN----EHVDD 249
           W      D  A K+  K WPLF+ W+E+FGKDRATGE  E  +DA  ++      +H +D
Sbjct: 102 WIDFIKIDPQAKKMNTKKWPLFKDWEEIFGKDRATGEFVEGPLDATEEIQKSQAPQHSND 161

Query: 248 FMMNAETFVQELESEQQTETD-NASSCQSKKGVSERGQRKRKKKIDPGMISMCQL 87
             +     V   + E++ E   ++S   +K  +S       + K+ P ++ + +L
Sbjct: 162 MSLGFLIDVDLDDDEEEEENAYHSSKIGTKLKMSLDKMNLLQLKVSPNIVHLLEL 216


>ref|XP_004247308.1| PREDICTED: uncharacterized protein LOC101253719 [Solanum
           lycopersicum]
          Length = 710

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = -3

Query: 416 WDQIYLSDSNASKIRGKSWPLFEGWKEVFGKDRATGENAEDVMDAVNDL 270
           WD +   D NA  +  K WPLF  W+E+FGKDRATGE AE   DAV ++
Sbjct: 398 WDDLIKVDPNAKSMNLKKWPLFADWEEIFGKDRATGEFAEGPEDAVEEI 446


>ref|XP_004231529.1| PREDICTED: uncharacterized protein LOC101255640 [Solanum
           lycopersicum]
          Length = 188

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = -3

Query: 416 WDQIYLSDSNASKIRGKSWPLFEGWKEVFGKDRATGENAEDVMDAVNDLMNEHVDDFM 243
           WD +   D NA  +  K WPLF  W+E+FGKDRATGE AE   D   ++      +F+
Sbjct: 121 WDDLIKVDPNAKSMNLKKWPLFADWEEIFGKDRATGEFAEGPEDVAEEIERIESQEFL 178


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