BLASTX nr result
ID: Mentha25_contig00058229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00058229
(328 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 101 3e-21
gb|ABF94958.1| retrotransposon protein, putative, Ty1-copia subc... 82 2e-20
gb|AAX96510.1| retrotransposon protein, putative, Ty1-copia sub-... 84 8e-20
emb|CAN80986.1| hypothetical protein VITISV_030770 [Vitis vinifera] 82 3e-18
emb|CAE01619.3| OSJNBa0042L16.8 [Oryza sativa Japonica Group] 69 2e-17
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 85 8e-17
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16... 85 8e-17
emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group] 87 2e-16
emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group] 86 2e-16
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc... 86 3e-16
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 86 3e-16
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc... 86 3e-16
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa... 86 3e-16
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo... 86 3e-16
gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc... 86 3e-16
gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japoni... 86 3e-16
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 86 3e-16
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc... 86 3e-16
dbj|BAB03249.1| polyprotein [Oryza sativa] 86 3e-16
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group] 86 3e-16
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 101 bits (252), Expect(2) = 3e-21
Identities = 48/73 (65%), Positives = 55/73 (75%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DIA AVS+L RY HNP+ HW L LL+YLKGT ++ LH K P VLE YCDANW+T N
Sbjct: 920 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPVVLEGYCDANWVTDN 979
Query: 66 DEVSSTSGYVFTL 28
DEV+STSGYVF L
Sbjct: 980 DEVNSTSGYVFLL 992
Score = 25.8 bits (55), Expect(2) = 3e-21
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGAISWKS
Sbjct: 990 FLLGGGAISWKS 1001
>gb|ABF94958.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1104
Score = 82.0 bits (201), Expect(3) = 2e-20
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS++ R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 900 DISFAVSKMSRFVSNPGDDHWQALERVMRYLKGTMSYRIHYTGYPKVLEGYSDSNWISDA 959
Query: 66 DEVSSTSGYVFTL 28
DE+ + SGYVFTL
Sbjct: 960 DEIKAMSGYVFTL 972
Score = 37.7 bits (86), Expect(3) = 2e-20
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -3
Query: 326 LSSVFYMKDLGEADVILGIKLQR 258
LS F MKDLGEADVIL IKLQR
Sbjct: 857 LSKSFEMKDLGEADVILNIKLQR 879
Score = 25.0 bits (53), Expect(3) = 2e-20
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 970 FTLGGGAVSWKS 981
>gb|AAX96510.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550477|gb|ABA93274.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 643
Score = 84.3 bits (207), Expect(3) = 8e-20
Identities = 36/73 (49%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI AVS+L ++ NP ++HW L R+++YLKGT ++ +H + P VLE Y D+NW++
Sbjct: 433 DILFAVSKLSQFVSNPGDDHWHALERVMRYLKGTMSYGIHYARYPKVLEGYSDSNWISDA 492
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 493 DEIKATSGYVFTL 505
Score = 33.1 bits (74), Expect(3) = 8e-20
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -3
Query: 326 LSSVFYMKDLGEADVILGIKLQRND 252
LS F MKDLG ADVIL I L R D
Sbjct: 369 LSKCFEMKDLGVADVILNINLLRGD 393
Score = 25.0 bits (53), Expect(3) = 8e-20
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 503 FTLGGGAVSWKS 514
>emb|CAN80986.1| hypothetical protein VITISV_030770 [Vitis vinifera]
Length = 251
Score = 81.6 bits (200), Expect(3) = 3e-18
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -2
Query: 231 VSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGNDEVSS 52
+ +L RY +P+ +HWT++ R+LKYL+GT N+ L PSVLE + DANW++ +D++ S
Sbjct: 138 LGRLSRYTQSPNQDHWTIVRRVLKYLRGTINYGLCFSGFPSVLEGFSDANWISDSDDMKS 197
Query: 51 TSGYVFTL 28
TSGYVFTL
Sbjct: 198 TSGYVFTL 205
Score = 32.7 bits (73), Expect(3) = 3e-18
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3
Query: 314 FYMKDLGEADVILGIKLQR 258
F MKDLGEA+VILGIK+ R
Sbjct: 95 FDMKDLGEAEVILGIKITR 113
Score = 22.7 bits (47), Expect(3) = 3e-18
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GG A+SWKS
Sbjct: 203 FTLGGSAVSWKS 214
>emb|CAE01619.3| OSJNBa0042L16.8 [Oryza sativa Japonica Group]
Length = 1110
Score = 69.3 bits (168), Expect(3) = 2e-17
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -2
Query: 195 NEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGNDEVSSTSGYVFTL 28
++HW L R+++YLKGT ++ +H P VLE Y D+NW++ DE+ +TSGYVFTL
Sbjct: 923 DDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEIKATSGYVFTL 978
Score = 40.0 bits (92), Expect(3) = 2e-17
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = -3
Query: 326 LSSVFYMKDLGEADVILGIKLQRND 252
LS F MKDLGEADVIL IKLQR D
Sbjct: 884 LSKSFEMKDLGEADVILNIKLQRGD 908
Score = 25.0 bits (53), Expect(3) = 2e-17
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 976 FTLGGGAVSWKS 987
>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 84.7 bits (208), Expect(2) = 8e-17
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ P ++HW L R+L+YLKGT + +H +P VLE YCDANW++
Sbjct: 1115 DISYAVSKLSRFVSKPGDDHWRALERVLRYLKGTMTYGIHYTGNPKVLEGYCDANWISDA 1174
Query: 66 DEVSSTSGYVF 34
DE+ +TSGYVF
Sbjct: 1175 DELYATSGYVF 1185
Score = 27.7 bits (60), Expect(2) = 8e-17
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F FGGGA+SWKS
Sbjct: 1185 FLFGGGAVSWKS 1196
>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
gag/pol protein [Zea mays]
Length = 1279
Score = 84.7 bits (208), Expect(2) = 8e-17
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ P ++HW L R+L+YLKGT + +H +P VLE YCDANW++
Sbjct: 1075 DISYAVSKLSRFVSKPGDDHWCALERVLRYLKGTMTYGIHYTGNPKVLEGYCDANWISDA 1134
Query: 66 DEVSSTSGYVF 34
DE+ +TSGYVF
Sbjct: 1135 DELYATSGYVF 1145
Score = 27.7 bits (60), Expect(2) = 8e-17
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F FGGGA+SWKS
Sbjct: 1145 FLFGGGAVSWKS 1156
>emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]
Length = 1282
Score = 87.0 bits (214), Expect(2) = 2e-16
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT LH P+VLE Y D+NW++G
Sbjct: 979 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISGV 1038
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1039 DEIKATSGYVFTL 1051
Score = 23.9 bits (50), Expect(2) = 2e-16
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SW+S
Sbjct: 1049 FTLGGGAVSWRS 1060
>emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]
Length = 1183
Score = 85.9 bits (211), Expect(2) = 2e-16
Identities = 37/73 (50%), Positives = 54/73 (73%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++++H P VLE Y D+NW++
Sbjct: 979 DISFAVSKLSRFVSNPGDDHWQTLERVMRYLKGTMSYAIHYTGYPKVLEGYSDSNWISDA 1038
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1039 DEIKATSGYVFTL 1051
Score = 25.0 bits (53), Expect(2) = 2e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1049 FTLGGGAVSWKS 1060
>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1275 DISFAVSKLSRFVSNPGDDHWRALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1334
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1335 DEIKATSGYVFTL 1347
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1345 FTLGGGAVSWKS 1356
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1244 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1303
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1304 DEIKATSGYVFTL 1316
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1314 FTLGGGAVSWKS 1325
>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1209 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1268
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1269 DEIKATSGYVFTL 1281
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1279 FTLGGGAVSWKS 1290
>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1408
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1204 DISFAVSKLSRFVSNPGDDHWRALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1263
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1264 DEIKATSGYVFTL 1276
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1274 FTLGGGAVSWKS 1285
>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1190 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1249
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1250 DEIKATSGYVFTL 1262
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1260 FTLGGGAVSWKS 1271
>gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1357
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1153 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1212
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1213 DEIKATSGYVFTL 1225
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1223 FTLGGGAVSWKS 1234
>gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
gi|108710643|gb|ABF98438.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1318
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1114 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLERYSDSNWISDA 1173
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1174 DEIKATSGYVFTL 1186
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1184 FTLGGGAVSWKS 1195
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1209 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1268
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1269 DEIKATSGYVFTL 1281
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1279 FTLGGGAVSWKS 1290
>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1298
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1166 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1225
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1226 DEIKATSGYVFTL 1238
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1236 FTLGGGAVSWKS 1247
>dbj|BAB03249.1| polyprotein [Oryza sativa]
Length = 1268
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1064 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1123
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1124 DEIKATSGYVFTL 1136
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1134 FTLGGGAVSWKS 1145
>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 85.5 bits (210), Expect(2) = 3e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -2
Query: 246 DIA*AVSQLKRYKHNPSNEHWTVLNRLLKYLKGTSNWSLHSYKSPSVLEVYCDANWMTGN 67
DI+ AVS+L R+ NP ++HW L R+++YLKGT ++ +H P VLE Y D+NW++
Sbjct: 1064 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1123
Query: 66 DEVSSTSGYVFTL 28
DE+ +TSGYVFTL
Sbjct: 1124 DEIKATSGYVFTL 1136
Score = 25.0 bits (53), Expect(2) = 3e-16
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 37 FYFGGGAISWKS 2
F GGGA+SWKS
Sbjct: 1134 FTLGGGAVSWKS 1145