BLASTX nr result

ID: Mentha25_contig00057070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00057070
         (430 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007293817.1| La domain family [Marssonina brunnea f. sp. ...    62   1e-07

>ref|XP_007293817.1| La domain family [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
           gi|406862868|gb|EKD15917.1| La domain family [Marssonina
           brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 1117

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = -2

Query: 369 MSSTLIKSIGEKTPAPPLFSYAQAAKGRPSAPTPFAVQMTQSVVSNSLPSVNDANSITSK 190
           MSST  K  GE  PAPP+FSYAQAAKGR +A T  A+Q  Q+ VS + P   ++ S    
Sbjct: 1   MSSTTSKPNGEAAPAPPVFSYAQAAKGRAAATTASAMQSHQAAVSGNTPPAKESGSTIDT 60

Query: 189 TSQSYEIEEDTSIDKTDSTVVK---PDTS 112
            S   E   D S++ +  T+ K   PD+S
Sbjct: 61  PSVGSE-GGDRSVNGSYETLSKGEIPDSS 88


Top