BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00056168
         (831 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]    151   3e-34
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]    150   4e-34
ref|XP_007207787.1| hypothetical protein PRUPE_ppa025792mg, part...   142   2e-31
gb|AAM52339.1| fertility restorer [Petunia x hybrida]                 140   6e-31
gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosifor...   137   4e-30
ref|XP_004301711.1| PREDICTED: pentatricopeptide repeat-containi...   137   4e-30
gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosifor...   136   1e-29
ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat...   136   1e-29
ref|XP_007029247.1| ATP binding,nucleic acid binding,helicases, ...   135   2e-29
ref|XP_006599382.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-28
ref|XP_007029330.1| Tetratricopeptide repeat-like superfamily pr...   132   2e-28
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                         132   2e-28
ref|XP_002309701.2| hypothetical protein POPTR_0006s28610g [Popu...   132   2e-28
ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Popu...   132   2e-28
ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-28
ref|XP_002871729.1| pentatricopeptide repeat-containing protein ...   132   2e-28
ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat...   131   4e-28
ref|XP_007206472.1| hypothetical protein PRUPE_ppa027230mg [Prun...   131   4e-28
ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containi...   131   4e-28
ref|NP_197167.1| pentatricopeptide repeat-containing protein [Ar...   131   4e-28

>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  151 bits (381), Expect = 3e-34
 Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 4/220 (1%)
 Frame = +3

Query: 183 FSAKSSASRHFDGEKMLFSRAPTI----DFSSIRCADDAVRLFREMIALSPQPSVPAYNK 350
           F A S A RH+       S         +F +++C DDA  LFR+M+   P PSV +++K
Sbjct: 18  FFAYSIAPRHYSTNTRSISVKGNFGVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSK 77

Query: 351 LLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLG 530
           LL   V ++ Y     LF ++    I V+   LSI +N CC + + +LGF++L   FK G
Sbjct: 78  LLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKG 137

Query: 531 YEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNA 710
              N  IF TLL+GL    K  +A  LF+K++   +C+PN+ M  TVM+GL K G ++ A
Sbjct: 138 IPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKA 197

Query: 711 RDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
            DLL++M++    PN   YS VID  C +GM+D A  L++
Sbjct: 198 FDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLN 237



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 50/179 (27%), Positives = 89/179 (49%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +DA  + R MI     P V  YN ++       +   A  +FD M ++ IE N+ S +I 
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +N     ++++    +   + + G +P++     LL GL  +G+T  A++ F ++L+   
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             P+     T++ G  KNG    A      +++   + N++ Y+AVIDGLC NG +D A
Sbjct: 420 I-PDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 46/179 (25%), Positives = 87/179 (48%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D A  +F  MI  S +P++ +YN L++   + ++   A  +  ++  +G++ ++ + ++ 
Sbjct: 335 DRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVL 394

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++    L + +        +   G+ P+L    TLL G    G   EA S F K L  + 
Sbjct: 395 LHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRR 453

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
              N  +   V+ GL KNG+   A    + +   G +P+V  Y+A+I G C  G++D+A
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
 Frame = +3

Query: 282 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DAV LF++++  +  +P+   Y  +++   K    + AF L   M     + N C  SI 
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIV 219

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C    ++   ++L  + +    P++  ++TL+  L  + +     +LF +++ L +
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             PN     +V+ GL K G+  +A ++++ M + G +P+V  Y+ +IDG    G VD A
Sbjct: 280 -YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337


>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  150 bits (380), Expect = 4e-34
 Identities = 81/220 (36%), Positives = 124/220 (56%), Gaps = 4/220 (1%)
 Frame = +3

Query: 183 FSAKSSASRHFDGEKMLFSRAPTI----DFSSIRCADDAVRLFREMIALSPQPSVPAYNK 350
           F A S A RH+       S         +F +++C DDA  LFR+M+   P PSV +++K
Sbjct: 18  FFAYSIAPRHYSTNTCSISVKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSK 77

Query: 351 LLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLG 530
           LL   V ++ Y     LF ++    I V+   LSI +N CC + + +LGF++L   FK G
Sbjct: 78  LLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKG 137

Query: 531 YEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNA 710
              N   F TL++GL    K  +A  LF+K++   +C+PN+ M  TVM+GL K G ++ A
Sbjct: 138 IPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKA 197

Query: 711 RDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
            DLL++M++    PN + Y+ VID  C +GM+D A  L++
Sbjct: 198 FDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLN 237



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 49/179 (27%), Positives = 89/179 (49%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +DA  + R MI     P V  YN ++       +   A  +FD M ++ IE ++ S +I 
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +N     ++++    +   + + G +P++     LL GL  +G+T  A++ F ++L+   
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             P+     T++ G  KNG    A      +++   + N++ Y+AVIDGLC NG +D A
Sbjct: 420 I-PDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 46/179 (25%), Positives = 86/179 (48%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D A  +F  MI  S +P + +YN L++   + ++   A  +  ++  +G++ ++ + ++ 
Sbjct: 335 DRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVL 394

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++    L + +        +   G+ P+L    TLL G    G   EA S F K L  + 
Sbjct: 395 LHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRR 453

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
              N  +   V+ GL KNG+   A    + +   G +P+V  Y+A+I G C  G++D+A
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 43/179 (24%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
 Frame = +3

Query: 282 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DAV LF++++  +  +P+   Y  +++   K    + AF L   M     + N  + +I 
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIV 219

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C    ++   ++L  + +    P++  ++TL+  L  + +     +LF +++ L +
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             PN     +V+ GL K G+  +A ++++ M + G +P+V  Y+ +IDG    G VD A
Sbjct: 280 -YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337


>ref|XP_007207787.1| hypothetical protein PRUPE_ppa025792mg, partial [Prunus persica]
           gi|462403429|gb|EMJ08986.1| hypothetical protein
           PRUPE_ppa025792mg, partial [Prunus persica]
          Length = 568

 Score =  142 bits (358), Expect = 2e-31
 Identities = 81/226 (35%), Positives = 130/226 (57%)
 Frame = +3

Query: 153 YSSIQRFQRGFSAKSSASRHFDGEKMLFSRAPTIDFSSIRCADDAVRLFREMIALSPQPS 332
           YS++  FQ   ++K + SR+    K    R PT     +R  + A  +F EM+ + P PS
Sbjct: 17  YSALFHFQPS-NSKPNKSRNTQ-PKQFGVRDPT----RVRNLEHAFNVFDEMLHMRPLPS 70

Query: 333 VPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFAILG 512
           V  +N++L   VKL+ Y V    +++M   GI  N+C+L+I +NC CHL Q+   F++LG
Sbjct: 71  VGRFNQILGQVVKLKHYSVVISFYNQMGLFGIGSNVCTLTIVINCFCHLNQMGFSFSVLG 130

Query: 513 SLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL*KN 692
            LFK G+EPN+  F TL+ G +   + +EA  +F K++    C+P+     T++ G  + 
Sbjct: 131 QLFKSGFEPNVYTFNTLINGSLTENRVAEAAEIFNKMMKAGNCKPDVVTFGTLIKGFCRM 190

Query: 693 GQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
           G +  A  LL+ M++   NPN+ AY+ +ID LC + +V DA+ L S
Sbjct: 191 GNNSAAIQLLRRMEEGACNPNLVAYNTIIDSLCKDTLVVDALNLFS 236



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 42/167 (25%), Positives = 78/167 (46%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           DA +LF +M      P V  Y  LL    K ++  +A  LF  M  + +++++   +I +
Sbjct: 390 DAHKLFSQMQGCGHLPDVQTYAVLLDGLCKTQQLPMAMKLFRVMEGKKLDIDIVIYNILI 449

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
              C   ++E    I   L   G++PN+  +  ++ G   VG  SEAE L  + +    C
Sbjct: 450 EGLCIAGKIESALDIFYGLSSKGHQPNVRTYNIMISGFCNVGLISEAEKLVGE-MEENGC 508

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVID 782
            P+D    T++ G+  + ++  A   +Q M + GF+ +      ++D
Sbjct: 509 SPDDCTYNTIIRGIINSNETSRAMVFIQQMVERGFSADASTMELIVD 555



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 47/183 (25%), Positives = 86/183 (46%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DDA+ LFREM      P    Y  L+    KL   + A  LF +M+  G   ++ + ++ 
Sbjct: 354 DDAMMLFREMSRKGMVPHTITYTTLMDGFCKLGRIRDAHKLFSQMQGCGHLPDVQTYAVL 413

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C  +Q+ +   +   +     + ++ I+  L++GL + GK   A  +F   L+ K 
Sbjct: 414 LDGLCKTQQLPMAMKLFRVMEGKKLDIDIVIYNILIEGLCIAGKIESALDIFYG-LSSKG 472

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            QPN      ++SG    G    A  L+  M++ G +P+   Y+ +I G+ N+     AM
Sbjct: 473 HQPNVRTYNIMISGFCNVGLISEAEKLVGEMEENGCSPDDCTYNTIIRGIINSNETSRAM 532

Query: 819 LLV 827
           + +
Sbjct: 533 VFI 535


>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  140 bits (353), Expect = 6e-31
 Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 4/220 (1%)
 Frame = +3

Query: 183 FSAKSSASRHFDGEKMLFSRAPTI----DFSSIRCADDAVRLFREMIALSPQPSVPAYNK 350
           F A S A RH+       S         +F +++C DDA  LFR+M+   P PS  +++K
Sbjct: 18  FFAYSIAPRHYSTNTCSISVKGNFGVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSK 77

Query: 351 LLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLG 530
           LL   V ++ Y     +F ++    I V+  +LS  +N CC + + +LGF++L   FK G
Sbjct: 78  LLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKG 137

Query: 531 YEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNA 710
              N   F TL++GL    K  +A  LF+K++   +C+P++ M  TVM GL K G ++ A
Sbjct: 138 IPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKA 197

Query: 711 RDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
            DLL++M++    P+   Y+ VID  C +GM+D A  L++
Sbjct: 198 FDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLN 237



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 49/177 (27%), Positives = 85/177 (48%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           A R+F  MI    +P + +Y  L++  V+ ++   A  LF ++   G++ ++ + S+ + 
Sbjct: 337 ARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLR 396

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
               + + E        +   G+ PNL    TLL G    G   EA S F K L  +   
Sbjct: 397 GLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRRED 455

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
            N  +   V++GL KNG+   A    + +   G +P+V  Y+A+I G C  G++D+A
Sbjct: 456 TNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 49/175 (28%), Positives = 85/175 (48%)
 Frame = +3

Query: 294 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 473
           LF EMI L+  P V  +N ++    K  + + A  +   M  +G+E N  + ++ M+  C
Sbjct: 270 LFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYC 329

Query: 474 HLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 653
              Q+     I  S+   G EP++  +  L+ G V   K  +A  LFR+I    L +P+ 
Sbjct: 330 LRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGL-KPSI 388

Query: 654 SMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
                ++ GL + G++  A+     MQ  G  PN+  +  ++ G   NG+V++AM
Sbjct: 389 VTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAM 443


>gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
          Length = 595

 Score =  137 bits (346), Expect = 4e-30
 Identities = 68/189 (35%), Positives = 114/189 (60%)
 Frame = +3

Query: 264 SIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLC 443
           +++C DDAV LFR+M+   P PSV  ++KL    + ++ Y     LF +M+  GI +N  
Sbjct: 52  NVKCLDDAVTLFRQMVRKQPLPSVFDFSKLFKTMLSMKHYSAVVSLFREMQKLGIPINDF 111

Query: 444 SLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKI 623
            LSI +N  C + +V+  F++L    K G   ++  F TL++G+ +  K  +A +LF+K+
Sbjct: 112 ILSIVINSYCSMHRVDCAFSVLAIYLKKGIPFDVVTFTTLIRGIFVESKVKDAVNLFKKL 171

Query: 624 LTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGM 803
           +  K+C+PN+ M  TVMSGL K G +     LL++M++    P++  Y+ VID LC +  
Sbjct: 172 VREKICEPNEVMYATVMSGLSKRGHTEKTVSLLRLMEQGNTKPDIFNYNIVIDSLCKDRN 231

Query: 804 VDDAMLLVS 830
           +DDA+ L++
Sbjct: 232 LDDAISLLN 240



 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 48/179 (26%), Positives = 91/179 (50%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +DA  + R M   S +P +  YN ++       +   A  +FD M  + IE  + S +I 
Sbjct: 303 EDAEEVMRHMNEKSVEPDILTYNVIMDGYCLRGQMDRARRIFDFMIDKCIEPGIISYNIL 362

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +N  C  ++++    +   + + G +P++  F T+L+GL  VG+  +A+  F ++L++  
Sbjct: 363 INGYCKKKKLDEAMQLFREISRRGSKPDIVTFNTILQGLFEVGRIGDAKKFFAEMLSIGH 422

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             P+     T++ G  K G       LL  +++   N +++ Y+ VI+GLC NG +D A
Sbjct: 423 V-PDLYTHCTLLKGYFKYGLVEEGVSLLNELERKRENADIEFYNVVINGLCKNGKLDKA 480



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 46/179 (25%), Positives = 84/179 (46%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D A R+F  MI    +P + +YN L++   K ++   A  LF ++  RG + ++ + +  
Sbjct: 338 DRARRIFDFMIDKCIEPGIISYNILINGYCKKKKLDEAMQLFREISRRGSKPDIVTFNTI 397

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +     + ++         +  +G+ P+L    TLLKG    G   E  SL  + L  K 
Sbjct: 398 LQGLFEVGRIGDAKKFFAEMLSIGHVPDLYTHCTLLKGYFKYGLVEEGVSLLNE-LERKR 456

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
              +      V++GL KNG+   A  + + +   G  PNV+ Y+ +I+  C  G++ +A
Sbjct: 457 ENADIEFYNVVINGLCKNGKLDKAHAIFEALSLIGLLPNVRTYTIMINKFCLEGLLGEA 515


>ref|XP_004301711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63080,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  137 bits (346), Expect = 4e-30
 Identities = 76/195 (38%), Positives = 109/195 (55%)
 Frame = +3

Query: 246 PTIDFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRG 425
           P +DF      D A+ +F +M+   P PSV  +N++L+  VKL+ Y     LF +MR R 
Sbjct: 160 PKVDF-----LDSALNMFHQMLHSRPLPSVVLFNQILTRLVKLKHYSAVIPLFRQMRLRR 214

Query: 426 IEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAE 605
           I  N+ +L+I MNC CHL  +  G +I    FK G EP +  F TL+ G VL  +  EA 
Sbjct: 215 IVPNVYTLNILMNCYCHLNAMGFGLSIFAQFFKWGLEPIVITFNTLIHGFVLNNQGDEAT 274

Query: 606 SLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDG 785
            +F K+L    C+PN     T++ G  K G  R A  LL+ M++ G  PN+ +YS VID 
Sbjct: 275 RVFTKMLEEGDCEPNVVTFSTLIKGFCKTGDCRAAIQLLRKMEEIGCKPNIVSYSTVIDS 334

Query: 786 LCNNGMVDDAMLLVS 830
           LC    +D+A+ L+S
Sbjct: 335 LCKEASIDEALKLLS 349



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 35/99 (35%), Positives = 55/99 (55%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           + ++F E++ + P P V  +++LLS   +LE Y +   LF +M   GI  +  +L I  N
Sbjct: 51  SAKVFHELLHMRPLPPVACFSQLLSQLARLEHYDLVIPLFKQMGLIGIPPDASTLDILAN 110

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVL 581
           C CHL + EL F +L   FKLG +P+   F  L+   +L
Sbjct: 111 CYCHLNRAELSFPVLALFFKLGLQPHFTTFTALIHAFLL 149



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 46/183 (25%), Positives = 88/183 (48%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           ++A RL  +M++ S  P+V  ++ L+    K      A  + + M  R IE +  + S  
Sbjct: 377 EEATRLLDQMLSKSVSPNVLTFSVLVDTLCKAGMVVKAKNVVEMMMQRHIEPDTVTYSSL 436

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           M+  C   +++    +   +   G   N+   + L+ G   V +  +A  +F+++  ++L
Sbjct: 437 MDGYCMRGEMDHARQVFDHMISKGSMVNVHSCSILINGYCKVKEVDKANEIFKEMRRMEL 496

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
             P+     T++ G  K G+ + A  L   MQ  G  PNV+ Y+ ++DGLC N  +  A+
Sbjct: 497 V-PDTITYTTLIDGFCKAGRIQEAEKLFSEMQGCGRLPNVQTYAVLLDGLCKNQQLSTAI 555

Query: 819 LLV 827
            L+
Sbjct: 556 ELL 558



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 34/202 (16%)
 Frame = +3

Query: 324  QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFA 503
            +P    Y+ L+       E   A  +FD M  +G  VN+ S SI +N  C +++V+    
Sbjct: 427  EPDTVTYSSLMDGYCMRGEMDHARQVFDHMISKGSMVNVHSCSILINGYCKVKEVDKANE 486

Query: 504  ILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRK--------------ILTLKLC 641
            I   + ++   P+   + TL+ G    G+  EAE LF +              +L   LC
Sbjct: 487  IFKEMRRMELVPDTITYTTLIDGFCKAGRIQEAEKLFSEMQGCGRLPNVQTYAVLLDGLC 546

Query: 642  --------------------QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVK 761
                                + N  +   V+ GL K G+  +ARDL   +   G   +V 
Sbjct: 547  KNQQLSTAIELLKEMEADKLEVNIVVYSVVIDGLCKAGKMESARDLFCGLSSKGIQHDVI 606

Query: 762  AYSAVIDGLCNNGMVDDAMLLV 827
             Y+ +I GLC++G + +A  L+
Sbjct: 607  TYNIMIQGLCHHGFLAEAEKLL 628



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 42/177 (23%), Positives = 81/177 (45%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           A++L R+M  +  +P++ +Y+ ++    K      A  L  +M  RGI  N+ + +  ++
Sbjct: 309 AIQLLRKMEEIGCKPNIVSYSTVIDSLCKEASIDEALKLLSEMSSRGITPNVVTYTSLID 368

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C L   E    +L  +      PN+  F+ L+  L   G   +A+++   ++   + +
Sbjct: 369 GLCKLGHWEEATRLLDQMLSKSVSPNVLTFSVLVDTLCKAGMVVKAKNVVEMMMQRHI-E 427

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
           P+     ++M G    G+  +AR +   M   G   NV + S +I+G C    VD A
Sbjct: 428 PDTVTYSSLMDGYCMRGEMDHARQVFDHMISKGSMVNVHSCSILINGYCKVKEVDKA 484



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 48/180 (26%), Positives = 84/180 (46%)
 Frame = +3

Query: 282  DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
            +A +LF EM      P+V  Y  LL    K ++   A  L  +M    +EVN+   S+ +
Sbjct: 518  EAEKLFSEMQGCGRLPNVQTYAVLLDGLCKNQQLSTAIELLKEMEADKLEVNIVVYSVVI 577

Query: 462  NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
            +  C   ++E    +   L   G + ++  +  +++GL   G  +EAE L R+ +  K C
Sbjct: 578  DGLCKAGKMESARDLFCGLSSKGIQHDVITYNIMIQGLCHHGFLAEAEKLLRE-MGRKGC 636

Query: 642  QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAML 821
             P+     T++ GL  N  +  A +L+  M   GF+ +      +I GL +  +V  A+L
Sbjct: 637  FPDGFTYNTIIRGLLNNNLTSWAVELIHEMVDWGFSADASTLE-LIAGLLSKDIVHPALL 695


>gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
          Length = 595

 Score =  136 bits (342), Expect = 1e-29
 Identities = 77/238 (32%), Positives = 131/238 (55%), Gaps = 4/238 (1%)
 Frame = +3

Query: 129 KNMMRMIIYSSIQRFQRGFSAKSSASRHFDGEKMLFSRAPTIDFSS----IRCADDAVRL 296
           +N +  + +S+I R     + +  +S H     M  S       +S    ++C DDAV L
Sbjct: 6   RNGIPFLSFSAISRSSSAITVRVYSSSH---SNMSISAKGKFGVNSKLENVKCLDDAVTL 62

Query: 297 FREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCH 476
           FR+M+   P PSV  ++KL    + +E Y     LF +M+  GI +N   L+I +N  C 
Sbjct: 63  FRQMVRKQPLPSVFDFSKLFKTMLNMEHYSAVVSLFREMQKLGIPINDFILNIVINSYCL 122

Query: 477 LRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDS 656
           + +V+ GF++L    K G   ++  F TL++G+    K  +A +LF++++  K+C+PN+ 
Sbjct: 123 MHRVDCGFSVLPIYLKNGIPFDVVTFTTLIRGIFAENKVKDAVNLFKRLVREKICEPNEV 182

Query: 657 MILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
           M  TVM+GL K G S+    LL++M++    PN+  Y+ VID LC +  +D A+ L++
Sbjct: 183 MYATVMNGLSKWGHSQKTLSLLRLMEQGNTKPNIFNYNIVIDSLCKDRNLDAAISLLN 240



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 50/179 (27%), Positives = 88/179 (49%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +DA  + R M     +P+V  YN ++       +   A  +FD M  + IE N+ S S  
Sbjct: 303 EDAEEVMRHMTGKGVEPNVITYNAIIDGYCLCGQVDRARIVFDIMIDKCIEPNIISYSTL 362

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +N  C  +++     +   + + G +PN+ I+ T+L+GL  VG+   A   F ++L+   
Sbjct: 363 INGYCKKKKLAEAMQLFHEISQKGSKPNIIIYTTILQGLFEVGRIGNARKFFAEMLSTGH 422

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             P+     T++ G  K G    A  L   +++   N +++ Y+ VI+GLC NG +D A
Sbjct: 423 V-PDLYTHCTLLKGYFKYGLVEEALSLFNELERKTENADIEFYNVVINGLCKNGKLDKA 480



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 48/177 (27%), Positives = 88/177 (49%)
 Frame = +3

Query: 294 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 473
           LF EM+ L+  P V  +N ++    K  + + A  +   M  +G+E N+ + +  ++  C
Sbjct: 273 LFSEMLNLNIYPDVYTFNMVIDGLCKEGKVEDAEEVMRHMTGKGVEPNVITYNAIIDGYC 332

Query: 474 HLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 653
              QV+    +   +     EPN+  ++TL+ G     K +EA  LF +I + K  +PN 
Sbjct: 333 LCGQVDRARIVFDIMIDKCIEPNIISYSTLINGYCKKKKLAEAMQLFHEI-SQKGSKPNI 391

Query: 654 SMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
            +  T++ GL + G+  NAR     M  TG  P++  +  ++ G    G+V++A+ L
Sbjct: 392 IIYTTILQGLFEVGRIGNARKFFAEMLSTGHVPDLYTHCTLLKGYFKYGLVEEALSL 448


>ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Solanum tuberosum]
          Length = 655

 Score =  136 bits (342), Expect = 1e-29
 Identities = 65/193 (33%), Positives = 114/193 (59%)
 Frame = +3

Query: 252 IDFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIE 431
           ++F  ++C DDAV LF +M+ + P PSV  ++KL    + ++ Y     LF +M+  GI+
Sbjct: 108 LNFEKLKCLDDAVNLFNQMVRMKPLPSVVDFSKLFKNMISMKHYSAVLSLFREMQKLGIQ 167

Query: 432 VNLCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESL 611
           ++   L+  +N  C + + + GF +L    K G   ++  F TL++GL    K  +A  L
Sbjct: 168 IDGVILTSVINSYCMMHRADCGFLVLPIYLKNGVSFDVVTFTTLIRGLFAENKVKDAVEL 227

Query: 612 FRKILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLC 791
           F+K++  K+C+P++ M  TVM+GL K G ++    LL++M++    P +  Y+ VID LC
Sbjct: 228 FKKLVREKICEPDEVMYATVMNGLSKRGHTQKTLSLLRLMEQGNTKPKIINYNIVIDSLC 287

Query: 792 NNGMVDDAMLLVS 830
            +G +DDA+ L++
Sbjct: 288 KDGNLDDAINLLN 300



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 48/182 (26%), Positives = 94/182 (51%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +DA  + ++M+     P+V  YN ++       +   A  +FD +  +GIE  + S +I 
Sbjct: 363 EDAEEVMKQMVEKDVDPNVITYNVIMDGYCLRGQPDRARRIFDILIDKGIEPTIFSYTIL 422

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +N  C  +++     +   + + G +PN+  + T+L+GL  VG+   A+ LF ++++   
Sbjct: 423 INGYCKKKKIAKAMQLFCEISQKGLKPNIVTYNTILQGLFEVGRIGVAKQLFVEMVSTGP 482

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
             PN S   T++ G  K G    A  L   +++   N ++ +Y+ +I+GLC NG +D+A 
Sbjct: 483 V-PNLSTHNTLLDGYFKYGLVEEAMSLFNKLERKKKNIDIGSYNIIINGLCKNGKLDEAF 541

Query: 819 LL 824
            +
Sbjct: 542 AI 543



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 48/179 (26%), Positives = 86/179 (48%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D A R+F  +I    +P++ +Y  L++   K ++   A  LF ++  +G++ N+ + +  
Sbjct: 398 DRARRIFDILIDKGIEPTIFSYTILINGYCKKKKIAKAMQLFCEISQKGLKPNIVTYNTI 457

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +     + ++ +   +   +   G  PNL    TLL G    G   EA SLF K L  K 
Sbjct: 458 LQGLFEVGRIGVAKQLFVEMVSTGPVPNLSTHNTLLDGYFKYGLVEEAMSLFNK-LERKK 516

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
              +      +++GL KNG+   A  + Q +   G   NV+ Y+ +I G C  G++D+A
Sbjct: 517 KNIDIGSYNIIINGLCKNGKLDEAFAIFQKLSSMGLILNVRTYNTMITGFCLQGLLDEA 575



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 43/178 (24%), Positives = 82/178 (46%)
 Frame = +3

Query: 285  AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
            A +LF EM++  P P++  +N LL    K    + A  LF+K+  +   +++ S +I +N
Sbjct: 470  AKQLFVEMVSTGPVPNLSTHNTLLDGYFKYGLVEEAMSLFNKLERKKKNIDIGSYNIIIN 529

Query: 465  CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
              C   +++  FAI   L  +G   N+  + T++ G  L G   EA+ + RK +    C 
Sbjct: 530  GLCKNGKLDEAFAIFQKLSSMGLILNVRTYNTMITGFCLQGLLDEAKDMLRK-MEGDNCL 588

Query: 645  PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            PN+     ++ G  +  +       +  M  TGF+ +      ++  +  N  + D +
Sbjct: 589  PNNVTYNVIVQGYLRCRKINEMVTFMNEMTGTGFSFDATTAKLLVKEISENPSILDML 646



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 43/182 (23%), Positives = 81/182 (44%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DDA+ L  EM      P V  YN ++    K  ++     LF +M +  I +++ + +I 
Sbjct: 293 DDAINLLNEMKQKDICPDVVTYNSIIDSLCKFGKWGKVKTLFYEMVNLNIYLDVRTFNIL 352

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C   +VE    ++  + +   +PN+  +  ++ G  L G+   A  +F  IL  K 
Sbjct: 353 IDGLCKDGKVEDAEEVMKQMVEKDVDPNVITYNVIMDGYCLRGQPDRARRIF-DILIDKG 411

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            +P       +++G  K  +   A  L   + + G  PN+  Y+ ++ GL   G +  A 
Sbjct: 412 IEPTIFSYTILINGYCKKKKIAKAMQLFCEISQKGLKPNIVTYNTILQGLFEVGRIGVAK 471

Query: 819 LL 824
            L
Sbjct: 472 QL 473


>ref|XP_007029247.1| ATP binding,nucleic acid binding,helicases, putative [Theobroma
           cacao] gi|508717852|gb|EOY09749.1| ATP binding,nucleic
           acid binding,helicases, putative [Theobroma cacao]
          Length = 626

 Score =  135 bits (339), Expect = 2e-29
 Identities = 70/183 (38%), Positives = 116/183 (63%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           +A+ LF  MI   P+PS+  +++LL   V++++Y  A  L  +M   GI+ N+ +L+I +
Sbjct: 83  EALTLFNRMIHSHPRPSIIEFSRLLGAVVRIKDYVTAVSLIRQMELLGIQHNVYTLTILI 142

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           NC CHL+ V+ GF++LG +FKLG +PN+  F+TL+ GL +V K + A  LF  ++  +  
Sbjct: 143 NCFCHLQCVDFGFSLLGKMFKLGLQPNVITFSTLINGLCIVSKVARAVMLFNDMVR-EGY 201

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAML 821
           QPN     T+++GL K G +  A  LL++M++ G  PN+  Y+ +ID LC +  V +A+ 
Sbjct: 202 QPNLISYSTIVNGLCKIGDTSGAIRLLRMMEQRGCAPNIVTYTTIIDSLCKDENVTEALK 261

Query: 822 LVS 830
           L+S
Sbjct: 262 LLS 264



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 48/179 (26%), Positives = 84/179 (46%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           +   L +EM+A +  P+V   N LL    K      A  +  KM   G+  ++ + +  M
Sbjct: 293 EVTSLLKEMVANNVMPNVVTCNILLDALCKEGLVSEAHDVVKKMSQEGVGSDIVTYNTLM 352

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           + CC   ++     I   L   G  PN+  +  L  G     +  EA +LF +I + K  
Sbjct: 353 DSCCLRSEIYEARKIFDLLVGRGCAPNIVSYNALFSGYCKAKRVDEAMNLFHEI-SDKGF 411

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            P+      +++G+ + G+   A++L + M   G  P+   YSA++DGLC +G V +A+
Sbjct: 412 IPDVVTYTILINGMCEIGRLSAAQELFKEMSANGQIPDQMTYSALLDGLCKHGHVHEAL 470



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 46/186 (24%), Positives = 81/186 (43%)
 Frame = +3

Query: 258 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 437
           F  ++C D    L  +M  L  QP+V  ++ L++    + +   A  LF+ M   G + N
Sbjct: 145 FCHLQCVDFGFSLLGKMFKLGLQPNVITFSTLINGLCIVSKVARAVMLFNDMVREGYQPN 204

Query: 438 LCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 617
           L S S  +N  C +        +L  + + G  PN+  + T++  L      +EA  L  
Sbjct: 205 LISYSTIVNGLCKIGDTSGAIRLLRMMEQRGCAPNIVTYTTIIDSLCKDENVTEALKLLS 264

Query: 618 KILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 797
           + +  K    N     +++  +   GQ +    LL+ M      PNV   + ++D LC  
Sbjct: 265 E-MRGKGIPSNIVTYSSLIHAMCNLGQWKEVTSLLKEMVANNVMPNVVTCNILLDALCKE 323

Query: 798 GMVDDA 815
           G+V +A
Sbjct: 324 GLVSEA 329



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 44/168 (26%), Positives = 74/168 (44%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           A  LF+EM A    P    Y+ LL    K      A   F  M + G+E ++   SI ++
Sbjct: 434 AQELFKEMSANGQIPDQMTYSALLDGLCKHGHVHEALEFFQAMHNSGLEPSIFHYSILLD 493

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C +R+ +L   +   +F     PN+ ++  ++K L   G  +EA+ LFRK +    C 
Sbjct: 494 GLCQVREFKLARQLFRQIFAKALHPNIYVYTIMIKALFEEGLPNEAQELFRK-MEEGGCL 552

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGL 788
            N     T++ G  +N    +   +L  M   GF+ +      ++D L
Sbjct: 553 ANSCSYNTMVQGFLQNNDMSSVMQILHEMVDKGFSLDAPMAVMLVDFL 600



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 47/180 (26%), Positives = 80/180 (44%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           A+RL R M      P++  Y  ++    K E    A  L  +MR +GI  N+ + S  ++
Sbjct: 224 AIRLLRMMEQRGCAPNIVTYTTIIDSLCKDENVTEALKLLSEMRGKGIPSNIVTYSSLIH 283

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C+L Q +   ++L  +      PN+     LL  L   G  SEA  + +K ++ +   
Sbjct: 284 AMCNLGQWKEVTSLLKEMVANNVMPNVVTCNILLDALCKEGLVSEAHDVVKK-MSQEGVG 342

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
            +     T+M       +   AR +  ++   G  PN+ +Y+A+  G C    VD+AM L
Sbjct: 343 SDIVTYNTLMDSCCLRSEIYEARKIFDLLVGRGCAPNIVSYNALFSGYCKAKRVDEAMNL 402



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 44/183 (24%), Positives = 80/183 (43%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D+A+ LF E+      P V  Y  L++   ++     A  LF +M   G   +  + S  
Sbjct: 397 DEAMNLFHEISDKGFIPDVVTYTILINGMCEIGRLSAAQELFKEMSANGQIPDQMTYSAL 456

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C    V        ++   G EP++  ++ LL GL  V +   A  LFR+I   K 
Sbjct: 457 LDGLCKHGHVHEALEFFQAMHNSGLEPSIFHYSILLDGLCQVREFKLARQLFRQIFA-KA 515

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
             PN  +   ++  L + G    A++L + M++ G   N  +Y+ ++ G   N  +   M
Sbjct: 516 LHPNIYVYTIMIKALFEEGLPNEAQELFRKMEEGGCLANSCSYNTMVQGFLQNNDMSSVM 575

Query: 819 LLV 827
            ++
Sbjct: 576 QIL 578


>ref|XP_006599382.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 567

 Score =  132 bits (332), Expect = 2e-28
 Identities = 75/198 (37%), Positives = 113/198 (57%)
 Frame = +3

Query: 237 SRAPTIDFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMR 416
           S+ P+ID       DDAV  F +M+ +   P +  +NK+L    KL+ Y     L  +M 
Sbjct: 38  SQPPSID----NVVDDAVSQFNDMLLMRRTPPIIEFNKILGSLAKLKHYLTVISLSKQME 93

Query: 417 HRGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTS 596
            +GIE  L +L+I +NC CHL Q+   FA+LG + KLGY+PN     TL+KGL L G+  
Sbjct: 94  VKGIEPCLVTLNILINCFCHLGQMAFSFAVLGKILKLGYQPNTITLTTLMKGLCLKGEVK 153

Query: 597 EAESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAV 776
           ++     K++ L   Q N     T+++GL K G +R+A  LL++++     PNV  Y+ V
Sbjct: 154 KSLHFHDKVVALGF-QMNQVSYGTLLNGLCKIGGTRSANKLLRMIEDRSTRPNVVMYTTV 212

Query: 777 IDGLCNNGMVDDAMLLVS 830
           IDGLC + +V++A  L S
Sbjct: 213 IDGLCKDKLVNEAYDLYS 230



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 49/183 (26%), Positives = 91/183 (49%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           +A ++F  M+     PSV +Y+ +++   K +    A  L  +M H+ +  N  + S  +
Sbjct: 329 NAKQMFHSMVQTGVNPSVHSYSIMINGLCKSKRVDEAMNLLREMPHKNMVPNTVTYSSLI 388

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           +  C   ++     ++  +   G  PN+  + +LL GL       +A +LF K+   ++ 
Sbjct: 389 DGLCKSGRITSALDLMKEMHHRGQPPNVVTYTSLLDGLCKNQNHDKAIALFMKMKKRRI- 447

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAML 821
           QP       ++ GL K G+ +NA++L Q +   G+  NV  Y+ +I GLC  GM D+A+ 
Sbjct: 448 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVRGYCLNVWTYTVMISGLCKEGMFDEALA 507

Query: 822 LVS 830
           + S
Sbjct: 508 IKS 510



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 52/181 (28%), Positives = 92/181 (50%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           A +L R +   S +P+V  Y  ++    K +    A+ L+ +M  RGI  N+ + +  + 
Sbjct: 190 ANKLLRMIEDRSTRPNVVMYTTVIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYNTLIC 249

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C   Q+   F +L  +      P +  +  L+  L   GK  EA++L   ++T +  +
Sbjct: 250 GFCLAGQLMEAFGLLNEMILKNVNPGVNTYTILIDALCKEGKVKEAKNLLA-VMTKEGVK 308

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
           P+     T+M G    G+ +NA+ +   M +TG NP+V +YS +I+GLC +  VD+AM L
Sbjct: 309 PDVVTYNTLMDGYCLVGEVQNAKQMFHSMVQTGVNPSVHSYSIMINGLCKSKRVDEAMNL 368

Query: 825 V 827
           +
Sbjct: 369 L 369



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 49/186 (26%), Positives = 94/186 (50%)
 Frame = +3

Query: 270 RCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSL 449
           +  ++A  L+ EM A    P+V  YN L+       +   AF L ++M  + +   + + 
Sbjct: 220 KLVNEAYDLYSEMDARGIFPNVITYNTLICGFCLAGQLMEAFGLLNEMILKNVNPGVNTY 279

Query: 450 SIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILT 629
           +I ++  C   +V+    +L  + K G +P++  + TL+ G  LVG+   A+ +F  ++ 
Sbjct: 280 TILIDALCKEGKVKEAKNLLAVMTKEGVKPDVVTYNTLMDGYCLVGEVQNAKQMFHSMVQ 339

Query: 630 LKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVD 809
             +  P+      +++GL K+ +   A +LL+ M      PN   YS++IDGLC +G + 
Sbjct: 340 TGV-NPSVHSYSIMINGLCKSKRVDEAMNLLREMPHKNMVPNTVTYSSLIDGLCKSGRIT 398

Query: 810 DAMLLV 827
            A+ L+
Sbjct: 399 SALDLM 404



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 45/179 (25%), Positives = 75/179 (41%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D+A+ L REM   +  P+   Y+ L+    K      A  L  +M HRG   N+ + +  
Sbjct: 363 DEAMNLLREMPHKNMVPNTVTYSSLIDGLCKSGRITSALDLMKEMHHRGQPPNVVTYTSL 422

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C  +  +   A+   + K   +P +  +  L+ GL   G+   A+ LF+ +L    
Sbjct: 423 LDGLCKNQNHDKAIALFMKMKKRRIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVRGY 482

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
           C  N      ++SGL K G    A  +   M+  G  PN   +  +I  L      D A
Sbjct: 483 CL-NVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 540


>ref|XP_007029330.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao] gi|508717935|gb|EOY09832.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative [Theobroma cacao]
          Length = 747

 Score =  132 bits (332), Expect = 2e-28
 Identities = 69/183 (37%), Positives = 113/183 (61%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           DA+ LF  +   SP+P +  +NKLL   V ++ Y +   L  +M   GI  +  +L+I +
Sbjct: 73  DALTLFNLLAHASPRPCIVEFNKLLGAIVGMKHYAIVVSLCKQMELLGIIHDAYTLNILI 132

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           NC CHLR+V+ GF++LG + KLGY+P+L  F+TL+KG  +  K ++A  LF + + L   
Sbjct: 133 NCFCHLRRVDFGFSVLGKMLKLGYKPHLVTFSTLVKGFCMEHKVAQAARLFNE-MVLTGY 191

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAML 821
           QP+  +   +++G  K G +  A  +L+ M++ GF P++ A+SAVID LC N ++ +A+ 
Sbjct: 192 QPDLYIYTIIVNGFCKIGDTSGAVRMLRKMEERGFQPDIVAFSAVIDSLCKNKLITEALD 251

Query: 822 LVS 830
           L S
Sbjct: 252 LAS 254



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 55/182 (30%), Positives = 96/182 (52%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DDA+RLF EM   + +P+V  YN L+    K  +   A  +F+ M   GI+ N+ + S  
Sbjct: 282 DDAMRLFNEMDCKNLKPNVVTYNILVDALCKEGKVSEALGIFEIMTRSGIQPNVVTYSEL 341

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +N      +++    +  S+   G EPN+  +  ++ G     +  EA  LF + +T K 
Sbjct: 342 INGYRLRNEMDEARKVFDSMLTCGCEPNVFSYNIMINGYCKTNRIDEALKLFHE-MTQKG 400

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
             P+ +   T+MSG+ + G+  +A++L + M   G  PN   YS ++DG+C +G +D+A+
Sbjct: 401 PTPDIATYTTLMSGMFQVGRLLDAQELFEDMCSCGQVPNSMTYSVLLDGVCKHGRIDEAL 460

Query: 819 LL 824
            L
Sbjct: 461 RL 462



 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 48/189 (25%), Positives = 87/189 (46%)
 Frame = +3

Query: 258 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 437
           F  I     AVR+ R+M     QP + A++ ++    K +    A  L  +M+ +GI+ +
Sbjct: 205 FCKIGDTSGAVRMLRKMEERGFQPDIVAFSAVIDSLCKNKLITEALDLASEMKGKGIQAD 264

Query: 438 LCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 617
           + + S  +   C   + +    +   +     +PN+  +  L+  L   GK SEA  +F 
Sbjct: 265 VVTYSSLIRAMCSSGRWDDAMRLFNEMDCKNLKPNVVTYNILVDALCKEGKVSEALGIF- 323

Query: 618 KILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 797
           +I+T    QPN      +++G     +   AR +   M   G  PNV +Y+ +I+G C  
Sbjct: 324 EIMTRSGIQPNVVTYSELINGYRLRNEMDEARKVFDSMLTCGCEPNVFSYNIMINGYCKT 383

Query: 798 GMVDDAMLL 824
             +D+A+ L
Sbjct: 384 NRIDEALKL 392



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 41/177 (23%), Positives = 85/177 (48%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           A RLF EM+    QP +  Y  +++   K+ +   A  +  KM  RG + ++ + S  ++
Sbjct: 179 AARLFNEMVLTGYQPDLYIYTIIVNGFCKIGDTSGAVRMLRKMEERGFQPDIVAFSAVID 238

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C  + +     +   +   G + ++  +++L++ +   G+  +A  LF + +  K  +
Sbjct: 239 SLCKNKLITEALDLASEMKGKGIQADVVTYSSLIRAMCSSGRWDDAMRLFNE-MDCKNLK 297

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
           PN      ++  L K G+   A  + ++M ++G  PNV  YS +I+G      +D+A
Sbjct: 298 PNVVTYNILVDALCKEGKVSEALGIFEIMTRSGIQPNVVTYSELINGYRLRNEMDEA 354



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 44/173 (25%), Positives = 77/173 (44%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           DA  LF +M +    P+   Y+ LL    K      A  LF  M++ G E  +   +I +
Sbjct: 423 DAQELFEDMCSCGQVPNSMTYSVLLDGVCKHGRIDEALRLFQAMQNSGTEPYIVHYNILI 482

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           +      + ++ + +  ++F  G +P LP +  ++KGL   G   +A  LFRK + +  C
Sbjct: 483 DGMIEAGRHKVAWELFSNIFVTGLKPTLPTYNIMIKGLCNKGFPEKAYDLFRK-MEVDDC 541

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNG 800
            PN       + G  ++     A  +L  M   GF+ +    + ++D L  NG
Sbjct: 542 LPNSISYNITIRGFLQSNDMLRAMQILHEMASKGFSTDASTANMLVDLLSVNG 594



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 8/256 (3%)
 Frame = +3

Query: 81   SSAYRIFEFLQTIHEPKNMMRMIIYSSIQRFQRGFSAKSSASRHFDG------EKMLFSR 242
            S A  IFE +       N+   + YS +    R  +    A + FD       E  +FS 
Sbjct: 317  SEALGIFEIMTRSGIQPNV---VTYSELINGYRLRNEMDEARKVFDSMLTCGCEPNVFSY 373

Query: 243  APTID-FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRH 419
               I+ +      D+A++LF EM    P P +  Y  L+S   ++     A  LF+ M  
Sbjct: 374  NIMINGYCKTNRIDEALKLFHEMTQKGPTPDIATYTTLMSGMFQVGRLLDAQELFEDMCS 433

Query: 420  RGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSE 599
             G   N  + S+ ++  C   +++    +  ++   G EP +  +  L+ G++  G+   
Sbjct: 434  CGQVPNSMTYSVLLDGVCKHGRIDEALRLFQAMQNSGTEPYIVHYNILIDGMIEAGRHKV 493

Query: 600  AESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVI 779
            A  LF  I    L +P       ++ GL   G    A DL + M+     PN  +Y+  I
Sbjct: 494  AWELFSNIFVTGL-KPTLPTYNIMIKGLCNKGFPEKAYDLFRKMEVDDCLPNSISYNITI 552

Query: 780  DG-LCNNGMVDDAMLL 824
             G L +N M+    +L
Sbjct: 553  RGFLQSNDMLRAMQIL 568


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  132 bits (332), Expect = 2e-28
 Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 1/217 (0%)
 Frame = +3

Query: 183 FSAKSSASRHFDGEKMLFSRAPTIDFSS-IRCADDAVRLFREMIALSPQPSVPAYNKLLS 359
           F + SS+SR F       S    I+F   + C DDAV LF  M+ + P PSV  ++KL  
Sbjct: 18  FHSSSSSSRSF-------SAKAHINFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFK 70

Query: 360 CTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEP 539
             + ++ Y     LF +MR  GI ++   L+I  N  C   +++  F++L    K G   
Sbjct: 71  TMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPF 130

Query: 540 NLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNARDL 719
           N+  F TLL GL    K ++A  LF+K++  K+C+PN+ M  TVM+GL K G +     L
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSL 190

Query: 720 LQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
           L++M++    P+V+ YS VID LC +  +D A+ L++
Sbjct: 191 LRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLN 227



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 47/179 (26%), Positives = 92/179 (51%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +DA  + R MI    +P +  Y+ ++       +   A  +F+ +R +GI+ N+ S SI 
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +N  C  + +     + G + + G +P+   ++T+L GL+ VG+  +A+ +F ++L +  
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG- 408

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             P+  +  T++ G  K G    A  L   +++   + N+  Y+ VI+GLC N  V +A
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREA 467



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 48/182 (26%), Positives = 85/182 (46%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +  + L R M   + +P V  Y+ ++    K      A  L ++M+ + I  N+ + +  
Sbjct: 185 EKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSL 244

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C L Q E    +L  +  L   PN+  F+ L+ GL   GK  +A+ + R ++  K 
Sbjct: 245 IDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIE-KG 303

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            +P+      +M G    GQ   AR +  V++  G  PN+ +YS +I+G C    +  AM
Sbjct: 304 VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAM 363

Query: 819 LL 824
            L
Sbjct: 364 QL 365



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 46/179 (25%), Positives = 90/179 (50%)
 Frame = +3

Query: 294 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 473
           L  EM+ L+  P+V  ++ L+    K  + + A  +   M  +G+E ++ + S  M+  C
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319

Query: 474 HLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 653
              QV+    +   L   G +PN+  ++ L+ G       ++A  LF +I + K  +P+ 
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEI-SQKGLKPDT 378

Query: 654 SMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
               T++ GL + G+  +A+ +   M + G  P++  +S ++ G    G+V++AMLL S
Sbjct: 379 VTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFS 437


>ref|XP_002309701.2| hypothetical protein POPTR_0006s28610g [Populus trichocarpa]
           gi|550337278|gb|EEE93224.2| hypothetical protein
           POPTR_0006s28610g [Populus trichocarpa]
          Length = 596

 Score =  132 bits (331), Expect = 2e-28
 Identities = 74/191 (38%), Positives = 115/191 (60%), Gaps = 1/191 (0%)
 Frame = +3

Query: 261 SSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEY-KVAFYLFDKMRHRGIEVN 437
           SS R  DDA+  F  M+   P P +  + KLLS  VK+ +Y  V   L  +M   G+  N
Sbjct: 44  SSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPN 103

Query: 438 LCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 617
           + +LSI MNC C L++V+LGF++L  + KLG +P +  F TL+ GL  VG+ ++A  LF 
Sbjct: 104 IYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFD 163

Query: 618 KILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 797
            ++  K CQP+     T+++GL K G++  A  LL+ M++ G  PN+  YS +ID LC +
Sbjct: 164 DMVA-KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 222

Query: 798 GMVDDAMLLVS 830
            +V++A+ + S
Sbjct: 223 RLVNEALDIFS 233



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 51/179 (28%), Positives = 95/179 (53%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           +A +LF  MI    +P++ +YN L++   K +    A  LF++M H+G+  N  S +  +
Sbjct: 332 EARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLI 391

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           +  C L ++     +  ++   G  P+L  ++ LL G    G   +A  LFR + +  L 
Sbjct: 392 HGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYL- 450

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
           +PN  M   ++  + K+G  ++AR L   +   G  P+V+ Y+ +I+GLC  G++D+A+
Sbjct: 451 KPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 509



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 46/167 (27%), Positives = 80/167 (47%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           AV LF +M+A   QP V  YN +++   K+ E   A  L  KM   G + N+ + S  ++
Sbjct: 158 AVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 217

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C  R V     I   +   G  P++  + +L++GL    +  EA +L  ++ +L +  
Sbjct: 218 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNI-M 276

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDG 785
           P+      ++    K G+   A  +L+ M + G  PNV  YS+++ G
Sbjct: 277 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYG 323



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 42/187 (22%), Positives = 88/187 (47%)
 Frame = +3

Query: 258 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 437
           F  ++  D    +  ++I L  QP++  +  L++   K+ E+  A  LFD M  +G + +
Sbjct: 114 FCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPD 173

Query: 438 LCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 617
           + + +  +N  C + +      +L  + + G +PN+  ++TL+  L      +EA  +F 
Sbjct: 174 VYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF- 232

Query: 618 KILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 797
             +  K   P+     +++ GL K  + + A  LL  M      P++  ++ ++D  C  
Sbjct: 233 SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKE 292

Query: 798 GMVDDAM 818
           G V +A+
Sbjct: 293 GKVSEAL 299



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 50/183 (27%), Positives = 89/183 (48%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D+A++LF EMI     P+  +YN L+    +L + + A  LF  M   G   +L + SI 
Sbjct: 366 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 425

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C    +   F +  ++     +PNL ++  L+  +   G   +A  LF ++    L
Sbjct: 426 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 485

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            QP+  +  T+++GL K G    A +  + M+  G  P+  +Y+ +I GL  +     A+
Sbjct: 486 -QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRAL 544

Query: 819 LLV 827
           LLV
Sbjct: 545 LLV 547


>ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Populus trichocarpa]
           gi|550337275|gb|ERP59920.1| hypothetical protein
           POPTR_0006s28580g [Populus trichocarpa]
          Length = 567

 Score =  132 bits (331), Expect = 2e-28
 Identities = 78/214 (36%), Positives = 119/214 (55%), Gaps = 2/214 (0%)
 Frame = +3

Query: 195 SSASRHFDGEKML-FSRAPTIDFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVK 371
           SS+SR   G     +        SS R  DDA+  F  MI   P P +  + KLLS  VK
Sbjct: 21  SSSSRSSSGSSSSRYKHKNDASSSSFRNIDDALASFNHMIHRKPLPCIIQFTKLLSAIVK 80

Query: 372 LEEY-KVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLP 548
           + +Y  V   L  +M   G+  N  +L I MNC C L++V+LGF++L  + KLG +P + 
Sbjct: 81  MGQYYDVVISLSKQMGLAGLSSNTYTLHILMNCFCQLQRVDLGFSVLAKVIKLGLQPTIV 140

Query: 549 IFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQV 728
            F TL+ GL  VG+ ++A  LF  ++  + CQPN     T+++GL K G++  A  L + 
Sbjct: 141 TFNTLINGLCKVGEFAQAVELFDDMVA-RGCQPNVYTYTTIINGLCKTGEAAEAAGLFKK 199

Query: 729 MQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
           M++ G  P+V  YS +ID LC + +V++A+ + S
Sbjct: 200 MEEAGCQPDVVTYSTLIDSLCKDRLVNEALDIFS 233



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 56/187 (29%), Positives = 96/187 (51%)
 Frame = +3

Query: 258 FSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVN 437
           +SS     +A +LF  MI    +P V +YN L++   K +    A  LF++M H+G+  N
Sbjct: 324 YSSCTQVVEARKLFDVMITKGFKPVVFSYNILINGYCKAKRIDEAKQLFNEMIHQGLTPN 383

Query: 438 LCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR 617
             + +  ++  C L +V     +  ++   G  PNL  ++ LL G    G   +A  LFR
Sbjct: 384 KVTYNTLIHGLCQLGRVREAQDLFRNMRTNGNLPNLRTYSILLDGFCKQGYLGKAFRLFR 443

Query: 618 KILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNN 797
            + +  L +PN  M   ++  + K+G  ++AR L   +   G  PNV+ Y+ +I GLC  
Sbjct: 444 AMQSTHL-KPNPVMYTILVHAMCKSGNLKDARKLFSELFVQGLQPNVQIYTTIIFGLCKE 502

Query: 798 GMVDDAM 818
           G++D+A+
Sbjct: 503 GLLDEAL 509



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 47/180 (26%), Positives = 85/180 (47%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           AV LF +M+A   QP+V  Y  +++   K  E   A  LF KM   G + ++ + S  ++
Sbjct: 158 AVELFDDMVARGCQPNVYTYTTIINGLCKTGEAAEAAGLFKKMEEAGCQPDVVTYSTLID 217

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C  R V     I   +   G  P++  + +L++GL    +  EA +L  ++ +L +  
Sbjct: 218 SLCKDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI-M 276

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
           P+      ++    K G+   A  +L+ M + G  PNV  Y++++ G  +   V +A  L
Sbjct: 277 PDIVTFNVLVDTFCKEGKVLEALGVLKTMTEMGVEPNVVTYNSLMYGYSSCTQVVEARKL 336



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 50/183 (27%), Positives = 82/183 (44%)
 Frame = +3

Query: 276 ADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSI 455
           A +A  LF++M     QP V  Y+ L+    K      A  +F  M+ +GI  ++ + + 
Sbjct: 190 AAEAAGLFKKMEEAGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPDIFTYTS 249

Query: 456 AMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLK 635
            +   C+  + +   A+L  +  L   P++  F  L+      GK  EA  +  K +T  
Sbjct: 250 LIQGLCNFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVLEALGVL-KTMTEM 308

Query: 636 LCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             +PN     ++M G     Q   AR L  VM   GF P V +Y+ +I+G C    +D+A
Sbjct: 309 GVEPNVVTYNSLMYGYSSCTQVVEARKLFDVMITKGFKPVVFSYNILINGYCKAKRIDEA 368

Query: 816 MLL 824
             L
Sbjct: 369 KQL 371


>ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Fragaria vesca subsp. vesca]
          Length = 677

 Score =  132 bits (331), Expect = 2e-28
 Identities = 70/184 (38%), Positives = 101/184 (54%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D A+ +F EM+   P PSV    K+L   VKL+ Y     LF +M    I  + C+LS+ 
Sbjct: 124 DFALTVFHEMLRSRPLPSVIPLTKILGQLVKLKHYSAVIPLFKQMLLCRIAPDACTLSVI 183

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +NC CHL ++  G ++ GS FKLG +P +  F TL+ G VL  +  EA  +F  +L    
Sbjct: 184 INCYCHLSRMGFGLSVFGSFFKLGLQPTVITFNTLIHGFVLNNQVGEASRIFTNMLEGGH 243

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
           C+PN     T++ G  KNG    A  LL+ M++ G  PN+  YS VID LC   ++D+ +
Sbjct: 244 CKPNVVTFTTLIKGFCKNGNKSAAVQLLRNMEERGCEPNIVCYSTVIDSLCKETLIDEGL 303

Query: 819 LLVS 830
            L S
Sbjct: 304 KLFS 307



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D+ ++LF EMI     P V  Y+ ++    +L +++ A  L D+M  + +  N+ + S+ 
Sbjct: 300 DEGLKLFSEMITRGIVPDVVTYSSMIHGVCRLGQWREATRLLDQMLSKRVSPNVFTFSVL 359

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFR------- 617
           ++  C    V    +++  + + G +P+  I+++L+ G  + G+  +A  +F        
Sbjct: 360 VDALCKEGLVLKAKSVVQMMIQRGIQPDAFIYSSLMNGYCMQGEMDKARQIFDLLISKRS 419

Query: 618 --------------------------KILTLKLCQPNDSMILTVMSGL*KNGQSRNARDL 719
                                     KI+ L    PN     +++ G  K G+ + A++L
Sbjct: 420 VDVHCCSILIDGYCKAQEVDQAKKIVKIMRLMELVPNTITYTSLIDGFCKAGRIQEAQNL 479

Query: 720 LQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLV 827
              MQ  G  PN + Y+ ++DGLCNN  +  AM L+
Sbjct: 480 FTEMQGCGQLPNAQTYTVMLDGLCNNQQLSMAMELL 515



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 45/184 (24%), Positives = 84/184 (45%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D A ++ + M  +   P+   Y  L+    K    + A  LF +M+  G   N  + ++ 
Sbjct: 439 DQAKKIVKIMRLMELVPNTITYTSLIDGFCKAGRIQEAQNLFTEMQGCGQLPNAQTYTVM 498

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C+ +Q+ +   +L  +     E  + ++  +++GL   G    A  LF  + T +L
Sbjct: 499 LDGLCNNQQLSMAMELLKEMEANKLELTITVYNVVIEGLCKAGNIESARDLFSHLSTKEL 558

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            QP+      ++ GL  +G    A +LL+ M+     PN   Y+ +IDG C  G + +A 
Sbjct: 559 -QPDVRTYNIMIHGLCLHGLLIEAEELLKEMRSMELVPNTITYTTLIDGFCKAGRIQEAQ 617

Query: 819 LLVS 830
            L S
Sbjct: 618 KLFS 621



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           +  + +F EM+ + P P V  +++LL+   +LE Y V   LF +M   GI  +  +L+I 
Sbjct: 5   EQTLNMFNEMLHMRPLPPVACFSQLLAQIARLERYDVVIPLFKQMGVMGIAPDASTLNIV 64

Query: 459 MNCCCHLRQVE-LGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLK 635
            NC CH++Q   LG  +     KLG + +   F +L+   +L   T   ++   K+  L 
Sbjct: 65  TNCYCHMKQAPGLGLPVFPHFLKLGLQLDPTTFTSLINAFLLQTTTPPKKTSNPKLYYL- 123

Query: 636 LCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVI 779
                    LTV   + +   SR    ++ + +  G    +K YSAVI
Sbjct: 124 ------DFALTVFHEMLR---SRPLPSVIPLTKILGQLVKLKHYSAVI 162


>ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317566|gb|EFH47988.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 504

 Score =  132 bits (331), Expect = 2e-28
 Identities = 68/184 (36%), Positives = 111/184 (60%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DD++ LF  M+   P PS+  +++LLS   K+++Y V  YL+++M+  GI  NLC+ +I 
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +NC C   Q+ L  + LG + KLG+EP++  F +LL G     +  +A  +F +++ +  
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            +PN  +  T++ GL K+ Q  NA DLL  M+  G  P+   Y+++I GLCN+G  DDA 
Sbjct: 183 -EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 819 LLVS 830
            +VS
Sbjct: 242 RMVS 245



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 40/184 (21%), Positives = 86/184 (46%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DDA R+   M      P V  +N L+   VK      A  L+++M  R ++ ++ + S+ 
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +   C   +++    + G +   G  P++  ++ L+ G     K      LF ++    +
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            + N      ++ G  + G+   A ++ + M   G  PN+  Y+ ++ GLC+NG ++ A+
Sbjct: 358 VR-NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416

Query: 819 LLVS 830
           ++++
Sbjct: 417 VILA 420



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 43/181 (23%), Positives = 84/181 (46%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           DA+ +F  M+ +  +P+V  YN ++    K ++   A  L ++M   GI  +  + +  +
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           +  C+  + +    ++  + K    P++  F  L+   V  G+ SEAE L+ +++   L 
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL- 287

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAML 821
            P+      ++ GL    +   A  +   M   G  P+V  YS +I+G C +  V+  M 
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 822 L 824
           L
Sbjct: 348 L 348


>ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Solanum tuberosum]
          Length = 588

 Score =  131 bits (329), Expect = 4e-28
 Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 2/222 (0%)
 Frame = +3

Query: 171 FQRGFSAKSSASRHFDGEKMLFSRAPTIDFSSIRCADDAVRLFREMIALSPQPSVPAYNK 350
           F    SA+  +S H  G          I+F +++C DDAV LF +M+ + P PS+  ++K
Sbjct: 19  FSTSLSARPYSSSHVIGLP--------INFENVKCLDDAVILFTQMVTMKPLPSLVDFSK 70

Query: 351 LLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLG 530
           L    + ++ Y     LF +MR  GI +N   LS  +N  C + +VE  F+IL    K G
Sbjct: 71  LFKTIIIMKHYSAVVSLFREMRKLGIPINEFILSNVINSYCLMNRVECAFSILPIYLKNG 130

Query: 531 YEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNA 710
              N+  F TL++G     K   A  LF+K++  K+C+P++ M  TVM+GL K G +   
Sbjct: 131 IPFNVVAFNTLIRGFFAENKVKNAVELFKKLVREKICEPDEVMYATVMNGLSKGGHTEKT 190

Query: 711 RDLLQVMQK--TGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
             LL++M++  T   P++  Y+ VID LC +G  D A+ L++
Sbjct: 191 LSLLRLMEQENTFPKPDIFIYTIVIDALCKDGNFDVAITLLN 232



 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 51/179 (28%), Positives = 89/179 (49%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           D+A R F  MI    +  + +YN L++   K  +   A  LF ++  +G++ N+ + +  
Sbjct: 331 DEAKRTFDIMIDKCIEHDIISYNILINGYCKKNKLAEAMQLFCEISQKGLKSNIVTYTTI 390

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +     + ++     I   +   G EP++   + LLKG  + G   EA SLF+K L  K 
Sbjct: 391 LQGLFAVGRIGDVEKIYAEMLSTGPEPDIHTHSVLLKGYFMYGLVEEAMSLFKK-LESKR 449

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
              + +    V +GL KNG+   AR + + +   G  PNV+ Y+ +I+G C  G+ D+A
Sbjct: 450 EVTSIAFYSVVTNGLCKNGKLEEARAIFEKLSFIGLLPNVRTYTVMINGFCLKGLFDEA 508



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEY-KVAFYLFDKMRHRGIEVNLCSLSI 455
           D A+ L  EM      P+V  YN L+    KL ++ KV  ++ +   +  I  ++C+ +I
Sbjct: 225 DVAITLLNEMKQRGISPNVVTYNSLIDGMCKLGQWEKVRNFVSEMAVNLNICPDVCTFNI 284

Query: 456 AMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLK 635
            ++  C   +V     ++  + + G EP++  + T++ G  L G+  EA+  F   + + 
Sbjct: 285 MIDGLCKEGKVADAEELMKHMVRKGVEPDIITYNTIMDGYCLCGQLDEAKRTFD--IMID 342

Query: 636 LCQPNDSMILTVM-SGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDD 812
            C  +D +   ++ +G  K  +   A  L   + + G   N+  Y+ ++ GL   G + D
Sbjct: 343 KCIEHDIISYNILINGYCKKNKLAEAMQLFCEISQKGLKSNIVTYTTILQGLFAVGRIGD 402



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
 Frame = +3

Query: 321 PQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQVELGF 500
           P+P +  Y  ++    K   + VA  L ++M+ RGI  N+ + +  ++  C L Q E   
Sbjct: 204 PKPDIFIYTIVIDALCKDGNFDVAITLLNEMKQRGISPNVVTYNSLIDGMCKLGQWEKVR 263

Query: 501 AILGSL-FKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDSMILTVMS 677
             +  +   L   P++  F  ++ GL   GK ++AE L + ++  K  +P+     T+M 
Sbjct: 264 NFVSEMAVNLNICPDVCTFNIMIDGLCKEGKVADAEELMKHMVR-KGVEPDIITYNTIMD 322

Query: 678 GL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
           G    GQ   A+    +M       ++ +Y+ +I+G C    + +AM L
Sbjct: 323 GYCLCGQLDEAKRTFDIMIDKCIEHDIISYNILINGYCKKNKLAEAMQL 371


>ref|XP_007206472.1| hypothetical protein PRUPE_ppa027230mg [Prunus persica]
           gi|462402114|gb|EMJ07671.1| hypothetical protein
           PRUPE_ppa027230mg [Prunus persica]
          Length = 524

 Score =  131 bits (329), Expect = 4e-28
 Identities = 69/195 (35%), Positives = 109/195 (55%)
 Frame = +3

Query: 246 PTIDFSSIRCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRG 425
           P  D   I   +DA  +F  M+ + P PSV  + K+L    KL+ Y     L+++M   G
Sbjct: 63  PKRDLPKITNVEDAFNVFDRMLQMRPLPSVVRFTKIL--VAKLKHYSAVISLYNQMGASG 120

Query: 426 IEVNLCSLSIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAE 605
           IE ++ +++I +NC CHL Q+    ++LG  FKLG EPN+  F TL+ G +L  +  +A 
Sbjct: 121 IEHDVYTVNIFINCYCHLNQMGFSLSVLGKFFKLGLEPNVFTFNTLINGFLLKNRVVQAA 180

Query: 606 SLFRKILTLKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDG 785
            LF K++    CQP+     T++ G    G +R A  LL+ M++    P +  Y+ +ID 
Sbjct: 181 ELFNKMINAGNCQPDAVTYGTLVKGFCMKGNNRAAIQLLRKMEEGACKPGLVVYNTIIDS 240

Query: 786 LCNNGMVDDAMLLVS 830
           LC + +VDDA+ L+S
Sbjct: 241 LCKDKLVDDALNLLS 255



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 50/187 (26%), Positives = 89/187 (47%)
 Frame = +3

Query: 270 RCADDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSL 449
           +  DDA+ L  EM++    P V  Y  L+    KL E+K A  L ++M  +    ++C+ 
Sbjct: 245 KLVDDALNLLSEMMSKGIAPDVITYTSLIHGVCKLGEWKEAKRLLNEMVSKNFFPDVCTF 304

Query: 450 SIAMNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILT 629
           S+ ++  C    V     ++  + +   +PN   + +L+ G  + G+ S+A  +F K++ 
Sbjct: 305 SVLVDTLCKEGMVGEAEGVVEMMIERDIQPNTVTYNSLMDGYCVRGEMSKARKVF-KLML 363

Query: 630 LKLCQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVD 809
            K    +     T+++G  K      A  LL+ M + G  PN   Y+ ++DG C  G + 
Sbjct: 364 SKGSMVDVFNYSTLINGYCKRKMMDEAMTLLREMSRKGLVPNTVTYNTLVDGCCKVGKLG 423

Query: 810 DAMLLVS 830
           DA  L S
Sbjct: 424 DAQQLFS 430



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
 Frame = +3

Query: 306 MIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCHLRQ 485
           MI    QP+   YN L+       E   A  +F  M  +G  V++ + S  +N  C  + 
Sbjct: 327 MIERDIQPNTVTYNSLMDGYCVRGEMSKARKVFKLMLSKGSMVDVFNYSTLINGYCKRKM 386

Query: 486 VELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC--QPNDSM 659
           ++    +L  + + G  PN   + TL+ G   VGK  +A+ LF +   ++ C   P+   
Sbjct: 387 MDEAMTLLREMSRKGLVPNTVTYNTLVDGCCKVGKLGDAQQLFSE---MQACGQLPDVQT 443

Query: 660 ILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
              ++ GL K+GQ   A  L + M+    + N+  Y+ +I+GLC  G ++ A +L
Sbjct: 444 YAILLDGLCKSGQLSTAIQLFREMEGKKLDVNIVIYNILIEGLCLAGKIESARVL 498



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 45/181 (24%), Positives = 87/181 (48%)
 Frame = +3

Query: 285 AVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMN 464
           A++L R+M   + +P +  YN ++    K +    A  L  +M  +GI  ++ + +  ++
Sbjct: 215 AIQLLRKMEEGACKPGLVVYNTIIDSLCKDKLVDDALNLLSEMMSKGIAPDVITYTSLIH 274

Query: 465 CCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQ 644
             C L + +    +L  +    + P++  F+ L+  L   G   EAE +   ++   + Q
Sbjct: 275 GVCKLGEWKEAKRLLNEMVSKNFFPDVCTFSVLVDTLCKEGMVGEAEGVVEMMIERDI-Q 333

Query: 645 PNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
           PN     ++M G    G+   AR + ++M   G   +V  YS +I+G C   M+D+AM L
Sbjct: 334 PNTVTYNSLMDGYCVRGEMSKARKVFKLMLSKGSMVDVFNYSTLINGYCKRKMMDEAMTL 393

Query: 825 V 827
           +
Sbjct: 394 L 394


>ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Solanum lycopersicum]
          Length = 590

 Score =  131 bits (329), Expect = 4e-28
 Identities = 79/238 (33%), Positives = 128/238 (53%)
 Frame = +3

Query: 117 IHEPKNMMRMIIYSSIQRFQRGFSAKSSASRHFDGEKMLFSRAPTIDFSSIRCADDAVRL 296
           I+  +N   +   SS+      F A SS   H+  E +       ++ S++   DDAV L
Sbjct: 3   INSLRNCNGIPFISSVSGSAYAFRACSSC--HYSKESISIKDKLGVNSSNL---DDAVTL 57

Query: 297 FREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCCH 476
           F +M+ + P PSV  ++KL    +K++ Y  A  LF +M   GI +N   LSI +N  C 
Sbjct: 58  FHQMVTMKPLPSVVDFSKLFKTMIKMKHYSAAISLFRQMLKLGIPINNFILSIMINSYCL 117

Query: 477 LRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPNDS 656
           + +V+  F++L    K G   N   F TLL+GL    K  +A  LF+K++  K+C+P+  
Sbjct: 118 MCRVDCAFSVLPIYLKNGIPFNAVTFNTLLRGLFSENKVKDAVELFKKLVREKICEPDVV 177

Query: 657 MILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLLVS 830
              TVM+GL K G ++    LL++M++    PN+  Y+ VID LC +G +D A+ +++
Sbjct: 178 TYATVMNGLSKRGHTQKTLSLLRLMEQGNTEPNIYIYNIVIDALCKDGNLDVAINILN 235



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 46/179 (25%), Positives = 93/179 (51%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           ++A  + + MI    +P++  Y+ L+       +   A  +FD +R +GIE N+ S +I 
Sbjct: 298 EEAEEVMKHMIEKGVEPNIITYSALMDGYCLRGQVNRARRIFDSLREKGIETNIFSYNIL 357

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +   C  ++V+    +   + + G +PN+  + T+L+GL  VG+T +A  L+ ++L+   
Sbjct: 358 IKGYCKKKKVDEAMQLFCEISQKGLKPNIVTYNTILQGLFEVGRTGDANQLYAEMLS-SG 416

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
            +P     + +++G    G    A      +++     +++ YS VI+GLC NG +D+A
Sbjct: 417 TKPTIQSHVILLNGYYNYGLVEEAMAFFNKLERNREYTDIECYSVVINGLCKNGKLDEA 475



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 46/177 (25%), Positives = 83/177 (46%)
 Frame = +3

Query: 294 LFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAMNCCC 473
           L R M   + +P++  YN ++    K     VA  + ++M+ + I  ++ + +  ++  C
Sbjct: 198 LLRLMEQGNTEPNIYIYNIVIDALCKDGNLDVAINILNEMKQKDIHPDVLTYNSLIDGLC 257

Query: 474 HLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLCQPND 653
            L Q E   ++   +  L   P++  F  L  GL   GK  EAE + + ++  K  +PN 
Sbjct: 258 KLGQWEKVTSLFSEMVNLNMHPDVRTFTILTDGLCKEGKVEEAEEVMKHMIE-KGVEPNI 316

Query: 654 SMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAMLL 824
                +M G    GQ   AR +   +++ G   N+ +Y+ +I G C    VD+AM L
Sbjct: 317 ITYSALMDGYCLRGQVNRARRIFDSLREKGIETNIFSYNILIKGYCKKKKVDEAMQL 373



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
 Frame = +3

Query: 282 DAVRLFREMIALSP-QPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DAV LF++++     +P V  Y  +++   K    +    L   M     E N+   +I 
Sbjct: 158 DAVELFKKLVREKICEPDVVTYATVMNGLSKRGHTQKTLSLLRLMEQGNTEPNIYIYNIV 217

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           ++  C    +++   IL  + +    P++  + +L+ GL  +G+  +  SLF +++ L +
Sbjct: 218 IDALCKDGNLDVAINILNEMKQKDIHPDVLTYNSLIDGLCKLGQWEKVTSLFSEMVNLNM 277

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDA 815
             P+      +  GL K G+   A ++++ M + G  PN+  YSA++DG C  G V+ A
Sbjct: 278 -HPDVRTFTILTDGLCKEGKVEEAEEVMKHMIEKGVEPNIITYSALMDGYCLRGQVNRA 335


>ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
           gi|10176973|dbj|BAB10191.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737318|dbj|BAF00605.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332004938|gb|AED92321.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  131 bits (329), Expect = 4e-28
 Identities = 68/184 (36%), Positives = 112/184 (60%)
 Frame = +3

Query: 279 DDAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIA 458
           DD++ LF  M+   P PS+  +++LLS   K+++Y V  YL+++M+  GI  NLC+ +I 
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 459 MNCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKL 638
           +NC C   Q+ L  + LG + KLG+EP++  F +LL G     +  +A  +F +++ +  
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 639 CQPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAM 818
            +PN  +  T++ GL K+ Q  NA DLL  M+K G  P+V  Y+++I GLC++G   DA 
Sbjct: 183 -KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 819 LLVS 830
            +VS
Sbjct: 242 RMVS 245



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 42/181 (23%), Positives = 84/181 (46%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           DA+ +F +M+ +  +P+V  YN ++    K ++   A  L ++M   GI  ++ + +  +
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
           +  C   +      ++  + K    P++  F  L+   V  G+ SEAE  + +++   L 
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL- 287

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAML 821
            P+      ++ GL    +   A ++   M   G  P+V  YS +I+G C +  V+  M 
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 822 L 824
           L
Sbjct: 348 L 348



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 38/183 (20%), Positives = 85/183 (46%)
 Frame = +3

Query: 282 DAVRLFREMIALSPQPSVPAYNKLLSCTVKLEEYKVAFYLFDKMRHRGIEVNLCSLSIAM 461
           DA R+   M      P V  +N L+   VK      A   +++M  R ++ ++ + S+ +
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298

Query: 462 NCCCHLRQVELGFAILGSLFKLGYEPNLPIFATLLKGLVLVGKTSEAESLFRKILTLKLC 641
              C   +++    + G +   G  P++  ++ L+ G     K      LF ++    + 
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358

Query: 642 QPNDSMILTVMSGL*KNGQSRNARDLLQVMQKTGFNPNVKAYSAVIDGLCNNGMVDDAML 821
           + N      ++ G  + G+   A ++ + M   G +PN+  Y+ ++ GLC+NG ++ A++
Sbjct: 359 R-NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417

Query: 822 LVS 830
           +++
Sbjct: 418 ILA 420