BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00055325
         (533 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...   161   1e-37
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   159   4e-37
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   153   2e-35
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   148   7e-34
emb|CAN80074.1| hypothetical protein VITISV_018877 [Vitis vinifera]   146   3e-33
emb|CAN63955.1| hypothetical protein VITISV_034255 [Vitis vinifera]   145   6e-33
emb|CAN64628.1| hypothetical protein VITISV_039432 [Vitis vinifera]   144   1e-32
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   144   1e-32
gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]             143   3e-32
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...   143   3e-32
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...   142   6e-32
emb|CAN63081.1| hypothetical protein VITISV_016842 [Vitis vinifera]   141   1e-31
emb|CAN75856.1| hypothetical protein VITISV_005690 [Vitis vinifera]   140   1e-31
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]   140   2e-31
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...   140   2e-31
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   140   2e-31
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   139   3e-31
gb|AFN88207.1| integrase core domain containing protein [Phaseol...   139   3e-31
emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera]   139   3e-31
emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]   139   3e-31

>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268497|emb|CAB78748.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1433

 Score =  161 bits (407), Expect = 1e-37
 Identities = 83/172 (48%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  F +  NGV MGV++YVDDI+I  N    V QF   L  +F+ +DLG  +YFLG+EI 
Sbjct: 1097 HTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIA 1156

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXX 360
            +SE GIS+CQRKYIL+LL  TG  GSKP++ P++    L + +  PL D           
Sbjct: 1157 RSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKL 1216

Query: 361  XXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTN 513
                 TRPD++Y+VNTL QF   P S HL+A ++VLRYLKGTVG  +FYS +
Sbjct: 1217 MYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSAD 1268


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  159 bits (402), Expect = 4e-37
 Identities = 83/175 (47%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  F +N +G+++ +++YVDD++IA N    +   K  L+K F+ KDLG+ +YFLGLEI 
Sbjct: 929  HSLFIKNVDGLFIALLVYVDDVIIASNNQGAIADLKSELNKLFKLKDLGDVKYFLGLEIA 988

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXX 360
            KS TGI V QRKY+LDLL D G  G K A+TPME+   L   E   LPD  +        
Sbjct: 989  KSSTGICVSQRKYVLDLLSDFGYLGCKAASTPMEANVKLSMDEGVDLPDVSLYRRLLGKL 1048

Query: 361  XXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
                 TRPD+SY V  LSQF+S+P   HL AA R+LRYLKG  G+ +F+ +NS+L
Sbjct: 1049 LYLTLTRPDISYVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSEL 1103


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  153 bits (387), Expect = 2e-35
 Identities = 79/176 (44%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  F R     Y+ +++YVDDI+IA N    +++ K  L+K F+ +DLG  +YFLGLEI 
Sbjct: 1140 HTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELKKDLAKAFKLRDLGPMKYFLGLEIA 1199

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPD-PKVXXXXXXX 357
            +++ GISVCQRKY ++LL+DTGL G +P+  PME    L +   + + D P+V       
Sbjct: 1200 RTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPSLKLSQHNDEHVIDNPEVYRRLVGK 1259

Query: 358  XXXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
                  TRPD++Y++N L QF S P + HL AA +V+ YLKGT+GL +FYS+ SDL
Sbjct: 1260 LMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQKVVHYLKGTIGLGLFYSSKSDL 1315


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  148 bits (374), Expect = 7e-34
 Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  F +  +G ++ V++YVDDI+IA    A   Q  + L + F+ +DLG+ +YFLGLE+ 
Sbjct: 1120 HTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVA 1179

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXX 360
            ++  GIS+CQRKY L+LLQ TG+   KP + PM     + + + D + D +         
Sbjct: 1180 RTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKL 1239

Query: 361  XXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
                 TRPD++++VN L QF S P + HLTAAYRVL+Y+KGTVG  +FYS +SDL
Sbjct: 1240 MYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDL 1294


>emb|CAN80074.1| hypothetical protein VITISV_018877 [Vitis vinifera]
          Length = 1001

 Score =  146 bits (368), Expect = 3e-33
 Identities = 72/165 (43%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
 Frame = +1

Query: 1    HLYFYR-NDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEI 177
            H  FYR N +   + +++YVDDI+I  +    +Q+ K HL  HFQ KDLG+ +YFLGLEI
Sbjct: 726  HSVFYRHNSSSQCIYLVVYVDDIVITSSDQVSIQRLKQHLFNHFQTKDLGKLKYFLGLEI 785

Query: 178  CKSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXX 357
             +S +G+++ QRKY LD+L++TGL   KP  TPM+    L   + +PL DP         
Sbjct: 786  AQSSSGVAMSQRKYALDILEETGLLECKPVDTPMDPNVKLVSGQGEPLRDPGRYRRLVGK 845

Query: 358  XXXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVG 492
                  TRPD+S+ V+ +SQFL  PC +H     R+LRY+KGT G
Sbjct: 846  LNYLTITRPDISFPVSVVSQFLQSPCDNHWDVVIRILRYIKGTPG 890


>emb|CAN63955.1| hypothetical protein VITISV_034255 [Vitis vinifera]
          Length = 1117

 Score =  145 bits (366), Expect = 6e-33
 Identities = 70/176 (39%), Positives = 106/176 (60%)
 Frame = +1

Query: 4    LYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICK 183
            ++++ N  G  + +++YVDDI+I C+    + + K HL  HFQ KDLG+ +YFLG+EI +
Sbjct: 829  VFYHHNSLGQCIYLVVYVDDIVITCSDKNGIXKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 888

Query: 184  SETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXX 363
            S +G+ + QRKY LD+L++TG+   KP  TPM+    L   +  PL DP+          
Sbjct: 889  SSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLILGQGKPLGDPRRYRRLVGKLN 948

Query: 364  XXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGLVFYSTNSDLAPS 531
                TRP++S+ ++ +SQFL  PC  H  A  R+LRY+K T G V   T++D A S
Sbjct: 949  YLTITRPBISFPISVVSQFLQSPCDSHWDAVIRILRYIKSTPGQVVGYTDADXAGS 1004


>emb|CAN64628.1| hypothetical protein VITISV_039432 [Vitis vinifera]
          Length = 578

 Score =  144 bits (364), Expect = 1e-32
 Identities = 78/171 (45%), Positives = 105/171 (61%), Gaps = 1/171 (0%)
 Frame = +1

Query: 10  FYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICKSE 189
           F +     +M +++YVDD+L+A +    +++ K  L   F  KDLG  + FLGLE+ +S+
Sbjct: 214 FIKKSESSFMVLLVYVDDVLLASDSILEIERLKTFLDAKFTIKDLGPLKCFLGLEVARSK 273

Query: 190 TGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXXXX 369
           TGIS+CQRK ILD+L+DTGLTGSKPAA PMES   L   + +   DP             
Sbjct: 274 TGISLCQRKXILDILKDTGLTGSKPAAFPMESTLKLSANDTNFYEDPSSYRRLIGRLLYL 333

Query: 370 XFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSD 519
             TRPD++Y V  LSQ L+KP   H  A  RVLRYLK T+G  +F+S +SD
Sbjct: 334 TLTRPDLAYYVQVLSQLLAKPAVSHHQATIRVLRYLKATLGQGLFFSFSSD 384


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  144 bits (363), Expect = 1e-32
 Identities = 73/173 (42%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
 Frame = +1

Query: 7    YFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICKS 186
            +F  +  G+ + V++YVDD++I  N   +VQ+FK++L + F  KDLG+ +YFLG+E+ + 
Sbjct: 1159 FFSYSCKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVSRG 1218

Query: 187  ETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXXX 366
              GI + QRKY LD++ D+G  G++PA TP+E   HL   +   L DPK           
Sbjct: 1219 PDGIFLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLY 1278

Query: 367  XXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
               TRP++SYSV+ LSQF+  P   HL AA R++RYLKG+ G  +  S+N DL
Sbjct: 1279 LLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDL 1331


>gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
          Length = 1309

 Score =  143 bits (360), Expect = 3e-32
 Identities = 72/164 (43%), Positives = 99/164 (60%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  F +  +GV MGV++YVDDI+I  N    V QF   L  +F+ +DL   +YF G+EI 
Sbjct: 1050 HTLFIKFASGVLMGVLVYVDDIMIVSNSDNAVTQFTTELKSYFKLRDLSAAKYFFGIEIA 1109

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXX 360
            +S  GIS+CQRKYIL+LL  TG  GSKP++ P+++   L + +  PL D           
Sbjct: 1110 RSAKGISICQRKYILELLSTTGFLGSKPSSIPLDTSVKLNKEDGVPLTDSTSYKKLVEKL 1169

Query: 361  XXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVG 492
                 TR  ++Y+VNT+ QF   P S HL+  ++VLRYLKGTVG
Sbjct: 1170 MYLQITRHGIAYAVNTVCQFSHAPTSVHLSVVHKVLRYLKGTVG 1213


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
            gi|7267797|emb|CAB81200.1| putative retrotransposon
            polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score =  143 bits (360), Expect = 3e-32
 Identities = 74/161 (45%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
 Frame = +1

Query: 43   VIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICKSETGISVCQRKYI 222
            V++YVDD++IA N  + V+  K+ L   F+ KDLG  ++FLGLEI +S  GISVCQRKY 
Sbjct: 719  VLVYVDDLMIASNDSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYA 778

Query: 223  LDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXXXXXFTRPDVSYSV 402
             +LL+D GL+G KP++ PM+   HL +     LP+                TRPD++++V
Sbjct: 779  QNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAV 838

Query: 403  NTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
            +TLSQFLS P   H+ AA++VLRYLKG  G  + YS +S+L
Sbjct: 839  HTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSEL 879


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  142 bits (357), Expect = 6e-32
 Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  F R     YM V++YVDDI+IA +     +  +D L +  + +DLG  +YFLGLEI 
Sbjct: 1095 HTLFTRKSKNSYMAVLVYVDDIIIASSCDRETELLRDALQRSSKLRDLGTLRYFLGLEIA 1154

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXX 360
            ++  GIS+CQRKY L+LL +TGL G K ++ PME    L + + + + D +         
Sbjct: 1155 RNTDGISICQRKYTLELLAETGLLGCKSSSVPMEPNQKLSQEDGELIDDAEHYRKLVGKL 1214

Query: 361  XXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
                FTRPD++Y+V+ L QF S P   HL A Y+++ YLKGTVG  +FYS N DL
Sbjct: 1215 MYLTFTRPDITYAVHRLCQFTSAPRVPHLKAVYKIIYYLKGTVGQGLFYSANVDL 1269


>emb|CAN63081.1| hypothetical protein VITISV_016842 [Vitis vinifera]
          Length = 1179

 Score =  141 bits (355), Expect = 1e-31
 Identities = 66/161 (40%), Positives = 100/161 (62%)
 Frame = +1

Query: 4    LYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICK 183
            ++++ N +G  + +++YVDDI+I  +    +Q+ K HL  HFQ KDLG+ +YFLG+EI +
Sbjct: 932  VFYHHNSSGQCIYLVVYVDDIIITGSDQNGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 991

Query: 184  SETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXX 363
            S +G+ + QRKY+LD+L++TG+   KP  TPM+    L   + +PL DP           
Sbjct: 992  SSSGVVLSQRKYVLDILEETGMLDCKPVDTPMDPNVKLIPGQGEPLGDPGRYRRLVGKLN 1051

Query: 364  XXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGT 486
                TRPD+S+ V+ +SQFL  PC  H  A  R+LRY+K T
Sbjct: 1052 YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKST 1092


>emb|CAN75856.1| hypothetical protein VITISV_005690 [Vitis vinifera]
          Length = 268

 Score =  140 bits (354), Expect = 1e-31
 Identities = 67/163 (41%), Positives = 99/163 (60%)
 Frame = +1

Query: 4   LYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICK 183
           ++++ N  G  + +++YVDDI+I C+    +Q+ K HL  HFQ KDLG+ +YFLG+EI +
Sbjct: 10  VFYHHNSLGQCIYLVVYVDDIVITCSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 69

Query: 184 SETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXX 363
           S +G+ + QRKY LD+L++TG+   K   TPM+    L   + +PL DP           
Sbjct: 70  SSSGVVLSQRKYALDILEETGMLDCKSVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLN 129

Query: 364 XXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVG 492
               TRPD+S+ V+ +SQFL  PC  H  A  R+LRY+K T G
Sbjct: 130 YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPG 172


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score =  140 bits (352), Expect = 2e-31
 Identities = 71/172 (41%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
 Frame = +1

Query: 10   FYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICKSE 189
            F +     ++ +++YVDDI++A N        K+ L+K F+ KDLG  +YFLGLE+ +S 
Sbjct: 681  FIKTAGNDFIALLVYVDDIIVASNNKIAADNLKNSLNKSFKLKDLGNLKYFLGLEVARSA 740

Query: 190  TGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXXXX 369
             GI + QRKY L+LL +TG  G KPA TPM+    L + + + L DP +           
Sbjct: 741  KGILINQRKYALELLSETGYLGCKPAKTPMQLNMQLSQDDGELLTDPNMYRRLIGKLIYL 800

Query: 370  XFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
              TRP+++YS+N L QFLS+P   HL A YR+L+Y+KG+ G  +F+S +S L
Sbjct: 801  TITRPNLTYSMNKLIQFLSQPRRPHLQAVYRILQYIKGSPGKGIFFSASSSL 852


>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score =  140 bits (352), Expect = 2e-31
 Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  F ++  G Y+ V++YVDDI+IA    A   Q    L   F+ +DLG+ +YFLGLEI 
Sbjct: 930  HTLFLKDCGGEYVVVLVYVDDIVIASTNEAAAVQLSQDLQNLFKLRDLGDLKYFLGLEIT 989

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXX 360
            ++E GIS+CQRKY L+LL  TG+   K  + PM     L + + + L D +         
Sbjct: 990  RTEAGISLCQRKYALELLASTGMINCKLVSVPMVPNLKLMKVDGELLEDREQYRRIVGTL 1049

Query: 361  XXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
                 TRPD++++VN L QF   P + HL AA+RVL+Y+KGTVG  +FYS +SDL
Sbjct: 1050 MYLTITRPDITFAVNKLCQFSYAPTTAHLQAAHRVLQYIKGTVGQGLFYSASSDL 1104


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  140 bits (352), Expect = 2e-31
 Identities = 71/156 (45%), Positives = 99/156 (63%)
 Frame = +1

Query: 25   NGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICKSETGISV 204
            N + + V+IYVDD+LI  N   ++Q+FKD+LS+ F  KDLG+ +YFLG+E+ +   GI +
Sbjct: 1175 NNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIEVSRGPEGIFL 1234

Query: 205  CQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXXXXXFTRP 384
             QRKY LD++ D+G  GS+PA TP+E   HL   +   L DPK              TRP
Sbjct: 1235 SQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLYLLHTRP 1294

Query: 385  DVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVG 492
            ++SYSV+ L+QF+  P   H  AA RV+RYLKG+ G
Sbjct: 1295 ELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPG 1330


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  139 bits (351), Expect = 3e-31
 Identities = 70/150 (46%), Positives = 97/150 (64%)
 Frame = +1

Query: 43   VIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICKSETGISVCQRKYI 222
            V++YVDD++IA N  + V+  K+ L   F+ KDLG  ++FLGLEI +S  GISVCQRKY 
Sbjct: 1133 VLVYVDDLMIASNDSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYA 1192

Query: 223  LDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXXXXXFTRPDVSYSV 402
             +LL+D GL+G KP++ PM+   HL +     LP+                TRPD++++V
Sbjct: 1193 QNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAV 1252

Query: 403  NTLSQFLSKPCSHHLTAAYRVLRYLKGTVG 492
            +TLSQFLS P   H+ AA++VLRYLKG  G
Sbjct: 1253 HTLSQFLSAPTDIHMQAAHKVLRYLKGNPG 1282


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  139 bits (351), Expect = 3e-31
 Identities = 67/164 (40%), Positives = 102/164 (62%)
 Frame = +1

Query: 1    HLYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEIC 180
            H  FYR+ +   + +++YVDDI++  +    + Q K HL ++FQ KDLG+ +YFLG+E+ 
Sbjct: 1053 HSVFYRHSSVGCIYLVVYVDDIVLTGSDHHGISQVKQHLCQNFQTKDLGKLRYFLGIEVA 1112

Query: 181  KSETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXX 360
            +S TGI + QRKY LD+L++ GL  SK   TPM+    L   + +PL DP+         
Sbjct: 1113 QSNTGIVISQRKYALDILEEIGLMNSKSVDTPMDPNVKLLPNQGEPLSDPEKYRRLVGKL 1172

Query: 361  XXXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVG 492
                 TRPD+S++V+ +SQFL+ PC  H  A  R+L+Y+KG+ G
Sbjct: 1173 NYLTVTRPDISFAVSVVSQFLNSPCEDHWNAVIRILKYIKGSPG 1216


>emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera]
          Length = 848

 Score =  139 bits (351), Expect = 3e-31
 Identities = 67/163 (41%), Positives = 99/163 (60%)
 Frame = +1

Query: 4    LYFYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICK 183
            ++++ N  G  + +++YVDDI+I  +    +Q+ K HL  HFQ KDLG+ +YFLG+EI +
Sbjct: 515  VFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 574

Query: 184  SETGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXX 363
            S +G+ + QRKY LD+L++TG+   KP  TPM+    L   + +PL DP           
Sbjct: 575  SSSGVXLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVXGQGEPLGDPGRYRRLVGKLN 634

Query: 364  XXXFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVG 492
                TRPD+S+ V+ +SQFL  PC  H  A  R+LRY+K T G
Sbjct: 635  YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPG 677


>emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
          Length = 987

 Score =  139 bits (351), Expect = 3e-31
 Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
 Frame = +1

Query: 10   FYRNDNGVYMGVIIYVDDILIACNQPALVQQFKDHLSKHFQFKDLGEPQYFLGLEICKSE 189
            F +     ++ +++YVDDI++A N        K+ L+K F+ KDLG  +YFLGLE+ +S 
Sbjct: 675  FIKTVGNDFIALLVYVDDIIVASNNKIATDNLKNSLNKSFKLKDLGNLKYFLGLEVARSA 734

Query: 190  TGISVCQRKYILDLLQDTGLTGSKPAATPMESITHLYECEKDPLPDPKVXXXXXXXXXXX 369
             GI + QRKY L+LL +TG  G KPA TPM+    L + + + L DP +           
Sbjct: 735  KGILINQRKYALELLSETGYLGCKPAKTPMQPNMQLSQDDGELLTDPNMYRRLIGKLIYL 794

Query: 370  XFTRPDVSYSVNTLSQFLSKPCSHHLTAAYRVLRYLKGTVGL-VFYSTNSDL 522
             FTRP+++YSVN LSQFL +    HL A YR+L+Y+KG+ G  +F+S +S L
Sbjct: 795  TFTRPNLTYSVNKLSQFLCQLRRPHLQAIYRILQYIKGSPGKGIFFSASSSL 846