BLASTX nr result
ID: Mentha25_contig00054441
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00054441
(807 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc... 85 3e-14
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group] 83 1e-13
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 70 5e-13
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 80 7e-13
emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group] 80 7e-13
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 79 1e-12
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera] 78 3e-12
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 78 4e-12
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G... 78 4e-12
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 76 1e-11
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 76 1e-11
gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japoni... 70 1e-11
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 76 2e-11
ref|XP_003635371.1| PREDICTED: uncharacterized protein LOC100853... 76 2e-11
gb|ACN32036.1| unknown [Zea mays] 74 6e-11
gb|ACL54615.1| unknown [Zea mays] 74 6e-11
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 74 8e-11
emb|CAN71385.1| hypothetical protein VITISV_016099 [Vitis vinifera] 74 8e-11
gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subc... 73 1e-10
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 73 1e-10
>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 358
Score = 85.1 bits (209), Expect = 3e-14
Identities = 39/90 (43%), Positives = 55/90 (61%)
Frame = +3
Query: 192 ICQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITN 371
ICQLCGKIGH +KC+KRFD ++G+ + VA A+ G ++ WY+D+GAT+HIT
Sbjct: 222 ICQLCGKIGHTVVKCWKRFDTSYSGEEKS-----VAAATNSYGVDTNWYIDTGATDHITG 276
Query: 372 ELANLQLRSNFIGAESVMVGNGQNNTTDSV 461
EL L +R + G + V +G D V
Sbjct: 277 ELEKLTVRDKYTGGDQVHTASGTGMGIDHV 306
>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 760
Score = 83.2 bits (204), Expect = 1e-13
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQLCGK+GH +KC+KRFD FTG+ + A+ G ++ WYVD+GAT+HIT E
Sbjct: 201 CQLCGKLGHTVIKCYKRFDTSFTGE-----EKAANTATTSYGIDTNWYVDTGATDHITGE 255
Query: 375 LANLQLRSNFIGAESVMVGNG 437
L L +R + G E V NG
Sbjct: 256 LDKLTVRDKYTGNEQVHAANG 276
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 70.1 bits (170), Expect(2) = 5e-13
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTG---DPSTTAQAFVADASQEI------GEESTWYVDS 347
CQLCGK GH+ L C+ RFDV++ G S+T+Q + +Q + +W++DS
Sbjct: 291 CQLCGKFGHMVLSCYHRFDVNYQGPRAPASSTSQIGLTPPAQAMMAAPSSASMDSWFLDS 350
Query: 348 GATNHITNELANLQLRSNFIGAESVMVG 431
GAT+H+++ AN+ + + G +SVMVG
Sbjct: 351 GATHHLSHTAANIHNGTPYNGTDSVMVG 378
Score = 31.2 bits (69), Expect(2) = 5e-13
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 421 SWWEMDKTTLQTLLKGSLVNGLYQIDLSSLSLKSAA 528
S++ DK T TLL+G L GLY+ SS+S +A+
Sbjct: 398 SFFVKDKDTKVTLLQGQLERGLYKFPTSSISSPTAS 433
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 80.5 bits (197), Expect = 7e-13
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQLCGKIGH KC+KRFD FTG+ + A VA +S E+ ++ WY+DSGAT+HIT+E
Sbjct: 194 CQLCGKIGHTVHKCWKRFDASFTGEDKS---ANVAASSYEV--DTNWYIDSGATDHITSE 248
Query: 375 LANLQLRSNFIGAESVMVGNG 437
L L ++ + G + V +G
Sbjct: 249 LDKLTVKDKYAGNDQVHTASG 269
>emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]
Length = 261
Score = 80.5 bits (197), Expect = 7e-13
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQLCGK+GH +KC+KRFD FTG+ A+ G ++ WYVD+GAT+H+T E
Sbjct: 187 CQLCGKLGHTVIKCYKRFDTSFTGEEKAANA-----ATTSYGIDTNWYVDTGATDHVTGE 241
Query: 375 LANLQLRSNFIGAESVMVGN 434
L L +R + G E V N
Sbjct: 242 LDKLTVRDKYTGNEQVHAAN 261
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 79.3 bits (194), Expect = 1e-12
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQ-----------AFVADASQEIGEESTWYV 341
CQLCGK GH A C+ RFD+ F G +T + A VA AS +ES WY+
Sbjct: 289 CQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADES-WYL 347
Query: 342 DSGATNHITNELANLQLRSNFIGAESVMVGNGQNNTTDSV 461
DSGA++H+T L NL S + G + V +GNG++ + ++
Sbjct: 348 DSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISNI 387
>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
Length = 1139
Score = 78.2 bits (191), Expect = 3e-12
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQA-----------FVADASQEIGEESTWYV 341
CQLCGK GH A C+ RFD+ F G +TT+ + VA AS +ES WY+
Sbjct: 260 CQLCGKFGHTAQICYHRFDISFQGGQTTTSHSLNNGNQNNIPTMVASASNSPADES-WYL 318
Query: 342 DSGATNHITNELANLQLRSNFIGAESVMVGNGQNNTTDSV 461
DSG ++H+T L NL S + G + V +GNG++ + ++
Sbjct: 319 DSGTSHHLTQNLGNLTSTSLYTGTDRVTIGNGKHLSISNI 358
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQLC K+GH +KC+KRFD FTG+ + A A+ G + WY+D+GAT+HIT++
Sbjct: 154 CQLCDKLGHTVVKCYKRFDASFTGEEKSAAA-----ATSSYGVGTNWYIDTGATDHITSD 208
Query: 375 LANLQLRSNFIGAESVMVGNG 437
L L +R + G + V +G
Sbjct: 209 LDKLTVREKYNGGDQVHTASG 229
>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 572
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQLC K+GH +KC+KRFD FTG+ + A A+ G + WY+D+GAT+HIT++
Sbjct: 227 CQLCDKLGHTVVKCYKRFDASFTGEEKSAAA-----ATSSYGVGTNWYIDTGATDHITSD 281
Query: 375 LANLQLRSNFIGAESVMVGNG 437
L L +R + G + V +G
Sbjct: 282 LDKLTVREKYNGGDQVHTASG 302
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 76.3 bits (186), Expect = 1e-11
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQ+CGK GH+A+ C+ RFD + + A VA S +G+ES WY+D+GAT+H+T
Sbjct: 256 CQVCGKYGHIAINCYHRFDQTYQPTMNNHLAAMVATPST-VGDES-WYMDTGATHHLTPN 313
Query: 375 LANLQLRSNFIGAESVMVGNG 437
L L + F G++ VMVGNG
Sbjct: 314 LNKLNSHTPFAGSDKVMVGNG 334
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 76.3 bits (186), Expect = 1e-11
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQ-----------AFVADASQEIGEESTWYV 341
CQLCGK GH A C+ RFD+ F G +TT+ A VA S +ES WY+
Sbjct: 139 CQLCGKFGHTAQICYHRFDISFQGGXTTTSPSLNNGNQNNILAMVASFSNSSADES-WYL 197
Query: 342 DSGATNHITNELANLQLRSNFIGAESVMVGNGQNNTTDSV 461
DSGA++H+T L NL S + G + V +GN ++ + ++
Sbjct: 198 DSGASHHLTQNLGNLTSTSPYTGTDRVTIGNXKHLSISNI 237
>gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 461
Score = 70.1 bits (170), Expect(2) = 1e-11
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQLCGKIGH+ C+ R+D +F D T A A G ++ WY+D+GAT+HIT E
Sbjct: 163 CQLCGKIGHVVADCWYRYDENFIPDSKTAAAA-------SYGVDTNWYMDTGATDHITGE 215
Query: 375 LANLQLRSNFIGAESVMVGNG 437
L L + G E + +G
Sbjct: 216 LDKLTTHEKYNGKEQIHTASG 236
Score = 26.2 bits (56), Expect(2) = 1e-11
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +1
Query: 436 DKTTLQTLLKGSLVNGLYQIDLSSL--SLKSAAQCSNLSSADP---VSDVPVRAPPL 591
D+ T LL+G NGLY + SSL S + S+DP PV P L
Sbjct: 256 DQVTKNLLLRGPCRNGLYPLPTSSLATSKQVLGAIKPTMSSDPEGGFQPSPVHTPAL 312
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gi|31430072|gb|AAP52036.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1058
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQLCGK+GH KC+KRFD FT + + A A S G ++ WYVDS AT+HIT E
Sbjct: 222 CQLCGKVGHTVAKCWKRFDPSFTREEKS---ANTAATSSSYGIDTNWYVDSNATDHITGE 278
Query: 375 LANLQLRSNFIGAESVMVGNG 437
+ L ++ + G+E V G
Sbjct: 279 MEKLSVKDKYHGSEQVHNAGG 299
>ref|XP_003635371.1| PREDICTED: uncharacterized protein LOC100853190 [Vitis vinifera]
Length = 251
Score = 75.9 bits (185), Expect = 2e-11
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTG-DPSTTAQAFVADASQEIGEESTWYVDSGATNHITN 371
CQ+CGK+ H AL CF + + G P T A VA+++ E EE TW+ DSGA HIT
Sbjct: 150 CQICGKLSHKALDCFHIMNYAYQGRHPPTQLAAMVANSNAE-QEEETWFADSGANQHITA 208
Query: 372 ELANLQLRSNFIGAESVMVGNGQ 440
L +L L+ + G E+V VGNGQ
Sbjct: 209 NLEHLTLQQPYTGQENVAVGNGQ 231
>gb|ACN32036.1| unknown [Zea mays]
Length = 376
Score = 73.9 bits (180), Expect = 6e-11
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQ+CGK H AL+C+ RFD + + ST QA A A+ E + WY+DSGAT+HIT++
Sbjct: 285 CQICGKGNHNALQCWHRFDQAYQAE-STVKQA--AAATHEYAVDPNWYMDSGATDHITSD 341
Query: 375 LANLQLRSNFIGAESVMVGNGQNNTTDS 458
L L R + G + + V NG ++ ++
Sbjct: 342 LERLTTRERYTGGDKIQVANGAGSSHEA 369
>gb|ACL54615.1| unknown [Zea mays]
Length = 376
Score = 73.9 bits (180), Expect = 6e-11
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = +3
Query: 195 CQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITNE 374
CQ+CGK H AL+C+ RFD + + ST QA A A+ E + WY+DSGAT+HIT++
Sbjct: 285 CQICGKGNHNALQCWHRFDQAYQAE-STVKQA--AAATHEYAVDPNWYMDSGATDHITSD 341
Query: 375 LANLQLRSNFIGAESVMVGNGQNNTTDS 458
L L R + G + + V NG ++ ++
Sbjct: 342 LERLTTRERYTGGDKIQVANGAGSSHEA 369
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 73.6 bits (179), Expect = 8e-11
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 192 ICQLCGKIGHLALKCFKRFDVHFTGD-PSTTAQAFVADASQEIGEESTWYVDSGATNHIT 368
+CQ+CGK GH A+ CF RFD + G P A VA+ + + WY+DSGA HIT
Sbjct: 274 VCQICGKSGHTAIDCFHRFDYSYQGRFPPQDLAAMVAETNATF-DHQVWYMDSGANAHIT 332
Query: 369 NELANLQLRSNFIGAESVMVGNG 437
++ NL + F +E+V VGNG
Sbjct: 333 SDATNLTHQQPFCESETVTVGNG 355
>emb|CAN71385.1| hypothetical protein VITISV_016099 [Vitis vinifera]
Length = 494
Score = 73.6 bits (179), Expect = 8e-11
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +3
Query: 192 ICQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITN 371
ICQ CGKIGH+ +KC+KRFD+ F+ T+ QA +A S E WYV+S ATNHIT
Sbjct: 353 ICQFCGKIGHVVVKCYKRFDISFSSVDLTSYQANIAFTSNFAXHE--WYVBSSATNHITV 410
Query: 372 ELANLQLR 395
++ NL ++
Sbjct: 411 DMNNLTIK 418
>gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 339
Score = 73.2 bits (178), Expect = 1e-10
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +3
Query: 192 ICQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVADASQEIGEESTWYVDSGATNHITN 371
+CQLCGK GH +KC+ RFD + + A A + G ++ WYVD GAT+HIT
Sbjct: 248 VCQLCGKTGHTVIKCWYRFDQTYQPEEKVAAAA----TNSAYGVDTNWYVDCGATDHITG 303
Query: 372 ELANLQLRSNFIGAESVMVGNGQNN 446
EL L +R + G + V NG +
Sbjct: 304 ELDKLSIREKYNGLDQVHATNGSGS 328
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 73.2 bits (178), Expect = 1e-10
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 192 ICQLCGKIGHLALKCFKRFDVHFTGDPSTTAQAFVA-DASQEIGEESTWYVDSGATNHIT 368
+CQ+CG+IGH A+KC+ RFD ++ + T QAF A S E G+E WY DS AT HIT
Sbjct: 280 VCQICGRIGHTAIKCYNRFDNNYQSEVPT--QAFSALRVSDETGKE--WYPDSAATAHIT 335
Query: 369 NELANLQLRSNFIGAESVMVGNG 437
+ LQ + + G ++V+VG+G
Sbjct: 336 ASTSGLQNATTYEGNDAVLVGDG 358