BLASTX nr result
ID: Mentha25_contig00054043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00054043
(447 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 107 2e-32
emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 104 6e-32
emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera] 104 9e-31
emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thal... 94 1e-29
emb|CAN72448.1| hypothetical protein VITISV_027002 [Vitis vinifera] 92 2e-28
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 95 3e-28
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 94 4e-28
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera] 92 3e-27
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 91 2e-26
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 91 2e-26
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 91 2e-26
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 91 2e-26
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 90 2e-26
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 90 2e-26
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 90 2e-26
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 91 2e-26
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 90 2e-26
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 90 2e-26
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 90 2e-26
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 91 2e-26
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 107 bits (266), Expect(2) = 2e-32
Identities = 54/80 (67%), Positives = 59/80 (73%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQRTVARSSTEAEYR+VA TA E PQQPVIYCDNVGAT+L
Sbjct: 340 ISWSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATNL 399
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
CSNPVFHS+MKHV L +H
Sbjct: 400 CSNPVFHSRMKHVA--LDYH 417
Score = 58.2 bits (139), Expect(2) = 2e-32
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRFTILRDK 358
ALDYHFIREQVQ G + V+++ DQLAD LTKPL+R +F L+ K
Sbjct: 413 ALDYHFIREQVQNGLLRVSHISASDQLADALTKPLARPQFDSLKAK 458
>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
Length = 569
Score = 104 bits (260), Expect(2) = 6e-32
Identities = 53/80 (66%), Positives = 57/80 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQRTVARSSTE EYR+VA TA E PQQPVIYCDNVGAT L
Sbjct: 431 ISWSSKKQRTVARSSTEVEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATHL 490
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
CSNPVFHS+MKHV L +H
Sbjct: 491 CSNPVFHSRMKHVA--LDYH 508
Score = 58.5 bits (140), Expect(2) = 6e-32
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRFTILRDK 358
ALDYHFIREQVQ G + V+++ DQLAD LTKPL+R +F L+ K
Sbjct: 504 ALDYHFIREQVQNGLLRVSHISASDQLADALTKPLARPQFNSLKAK 549
>emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera]
Length = 591
Score = 104 bits (260), Expect(2) = 9e-31
Identities = 54/80 (67%), Positives = 57/80 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQRTVARSSTEAEYRTVA TA E PQQPVIYCDNVGAT L
Sbjct: 453 ISWSSKKQRTVARSSTEAEYRTVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATHL 512
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
CSN VFHS+MKHV L +H
Sbjct: 513 CSNSVFHSRMKHVA--LDYH 530
Score = 54.7 bits (130), Expect(2) = 9e-31
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRFTILRDK 358
ALDYHFI+EQVQ G + V+++ +QL D LTKPL+R RF L+ K
Sbjct: 526 ALDYHFIQEQVQNGLLRVSHISASNQLVDALTKPLARPRFDSLKAK 571
>emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thaliana]
gi|10177325|dbj|BAB10674.1| copia-like retroelement pol
polyprotein-like [Arabidopsis thaliana]
Length = 1021
Score = 93.6 bits (231), Expect(2) = 1e-29
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SW++KKQ++VARSSTEAEYR+VA TA E P+ PV+YCDNVGAT L
Sbjct: 183 ISWTAKKQKSVARSSTEAEYRSVANTACEIQWICSLLTELGITLPKPPVVYCDNVGATFL 242
Query: 181 CSNPVFHSKMKHV 219
C+NPVFHS+MKH+
Sbjct: 243 CANPVFHSRMKHI 255
Score = 62.0 bits (149), Expect(2) = 1e-29
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRFTILRDK 358
A+DYHFIR QVQQG + V +V DQLAD LTKPL R+ FT LRDK
Sbjct: 256 AIDYHFIRGQVQQGILRVAHVNTRDQLADALTKPLPRNHFTELRDK 301
>emb|CAN72448.1| hypothetical protein VITISV_027002 [Vitis vinifera]
Length = 487
Score = 92.4 bits (228), Expect(2) = 2e-28
Identities = 45/73 (61%), Positives = 51/73 (69%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+TVARSSTEAEYR+VA TA E PV+YCDNVGAT L
Sbjct: 78 VSWSSKKQQTVARSSTEAEYRSVAATAAELCWVGSLLSDLGINFTTSPVVYCDNVGATQL 137
Query: 181 CSNPVFHSKMKHV 219
SNP+FHS+MKHV
Sbjct: 138 SSNPIFHSRMKHV 150
Score = 59.3 bits (142), Expect(2) = 2e-28
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRFTILRDK 358
A+DYHFIR+QVQ G + V +V DQLAD LTKPL S+F +LRDK
Sbjct: 151 AIDYHFIRDQVQSGLLRVAHVSSADQLADLLTKPLPTSQFLLLRDK 196
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 94.7 bits (234), Expect(2) = 3e-28
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ +ARSSTEAEYR VA TA E P PVIYCDNVGAT +
Sbjct: 1045 ISWSSKKQKNIARSSTEAEYRFVANTAAELNWVSSLLCDLGIQLPTCPVIYCDNVGATQV 1104
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
CSNPVFHS+MKHV FH
Sbjct: 1105 CSNPVFHSRMKHVA--FDFH 1122
Score = 56.2 bits (134), Expect(2) = 3e-28
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRFTILRDK 358
A D+HFIR+QVQ+G + V +V DQLAD LTK L R+RF LRDK
Sbjct: 1118 AFDFHFIRDQVQKGILRVAHVSSTDQLADLLTKSLPRARFLFLRDK 1163
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 94.4 bits (233), Expect(2) = 4e-28
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQR+VARSSTEAEYR VA TA+E PVIYCDN+GAT L
Sbjct: 1302 VSWSSKKQRSVARSSTEAEYRAVANTASELRWLCSLLLEMGISQTTVPVIYCDNIGATYL 1361
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
C+NPVFHS+MKHV L +H
Sbjct: 1362 CANPVFHSRMKHVA--LDYH 1379
Score = 56.2 bits (134), Expect(2) = 4e-28
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRFTILRDK 358
ALDYHF+R +Q G + V++V +DQLAD LTKPL R RFT L K
Sbjct: 1375 ALDYHFVRGYIQSGALRVSHVSTKDQLADALTKPLPRPRFTELNSK 1420
>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
Length = 1354
Score = 92.4 bits (228), Expect(2) = 3e-27
Identities = 45/73 (61%), Positives = 51/73 (69%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+TVARSSTEAEYR+VA TA E PV+YCDNVGAT L
Sbjct: 1226 VSWSSKKQQTVARSSTEAEYRSVAATAAELCWVGSLLSDLGIKFTTSPVVYCDNVGATQL 1285
Query: 181 CSNPVFHSKMKHV 219
SNP+FHS+MKHV
Sbjct: 1286 SSNPIFHSRMKHV 1298
Score = 55.1 bits (131), Expect(2) = 3e-27
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPL-SRSRFTILRDK 358
A+DYHFIR+QVQ G + V +V DQLAD LTKPL + S+F +LRDK
Sbjct: 1299 AIDYHFIRDQVQSGLLRVAHVSSADQLADLLTKPLPTYSQFLLLRDK 1345
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 90.5 bits (223), Expect(2) = 2e-26
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E PVIYCDNVGAT L
Sbjct: 1341 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1400
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
C+NPVFHS+MKH+ L +H
Sbjct: 1401 CANPVFHSRMKHIA--LDYH 1418
Score = 54.7 bits (130), Expect(2) = 2e-26
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
ALDYHFIR QVQ G + V +V DQLAD LTKPLSR F
Sbjct: 1414 ALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 90.5 bits (223), Expect(2) = 2e-26
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E PVIYCDNVGAT L
Sbjct: 1341 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1400
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
C+NPVFHS+MKH+ L +H
Sbjct: 1401 CANPVFHSRMKHIA--LDYH 1418
Score = 54.7 bits (130), Expect(2) = 2e-26
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
ALDYHFIR QVQ G + V +V DQLAD LTKPLSR F
Sbjct: 1414 ALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 90.5 bits (223), Expect(2) = 2e-26
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E PVIYCDNVGAT L
Sbjct: 1341 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1400
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
C+NPVFHS+MKH+ L +H
Sbjct: 1401 CANPVFHSRMKHIA--LDYH 1418
Score = 54.7 bits (130), Expect(2) = 2e-26
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
ALDYHFIR QVQ G + V +V DQLAD LTKPLSR F
Sbjct: 1414 ALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 90.5 bits (223), Expect(2) = 2e-26
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E PVIYCDNVGAT L
Sbjct: 1341 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1400
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
C+NPVFHS+MKH+ L +H
Sbjct: 1401 CANPVFHSRMKHIA--LDYH 1418
Score = 54.7 bits (130), Expect(2) = 2e-26
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
ALDYHFIR QVQ G + V +V DQLAD LTKPLSR F
Sbjct: 1414 ALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 90.1 bits (222), Expect(2) = 2e-26
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E + PVIYCDNVGAT L
Sbjct: 1339 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1398
Query: 181 CSNPVFHSKMKHV 219
C+NPVFHS+MKH+
Sbjct: 1399 CANPVFHSRMKHI 1411
Score = 55.1 bits (131), Expect(2) = 2e-26
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
A+DYHFIR QVQ G + V +V DQLAD LTKPLSR+ F
Sbjct: 1412 AIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 90.1 bits (222), Expect(2) = 2e-26
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E + PVIYCDNVGAT L
Sbjct: 1339 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1398
Query: 181 CSNPVFHSKMKHV 219
C+NPVFHS+MKH+
Sbjct: 1399 CANPVFHSRMKHI 1411
Score = 55.1 bits (131), Expect(2) = 2e-26
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
A+DYHFIR QVQ G + V +V DQLAD LTKPLSR+ F
Sbjct: 1412 AIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 90.1 bits (222), Expect(2) = 2e-26
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E + PVIYCDNVGAT L
Sbjct: 1339 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1398
Query: 181 CSNPVFHSKMKHV 219
C+NPVFHS+MKH+
Sbjct: 1399 CANPVFHSRMKHI 1411
Score = 55.1 bits (131), Expect(2) = 2e-26
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
A+DYHFIR QVQ G + V +V DQLAD LTKPLSR+ F
Sbjct: 1412 AIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 90.5 bits (223), Expect(2) = 2e-26
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E PVIYCDNVGAT L
Sbjct: 1322 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1381
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
C+NPVFHS+MKH+ L +H
Sbjct: 1382 CANPVFHSRMKHIA--LDYH 1399
Score = 54.7 bits (130), Expect(2) = 2e-26
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
ALDYHFIR QVQ G + V +V DQLAD LTKPLSR F
Sbjct: 1395 ALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1434
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 90.1 bits (222), Expect(2) = 2e-26
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E + PVIYCDNVGAT L
Sbjct: 1320 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1379
Query: 181 CSNPVFHSKMKHV 219
C+NPVFHS+MKH+
Sbjct: 1380 CANPVFHSRMKHI 1392
Score = 55.1 bits (131), Expect(2) = 2e-26
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
A+DYHFIR QVQ G + V +V DQLAD LTKPLSR+ F
Sbjct: 1393 AIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1432
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 90.1 bits (222), Expect(2) = 2e-26
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E + PVIYCDNVGAT L
Sbjct: 1320 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1379
Query: 181 CSNPVFHSKMKHV 219
C+NPVFHS+MKH+
Sbjct: 1380 CANPVFHSRMKHI 1392
Score = 55.1 bits (131), Expect(2) = 2e-26
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
A+DYHFIR QVQ G + V +V DQLAD LTKPLSR+ F
Sbjct: 1393 AIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1432
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 90.1 bits (222), Expect(2) = 2e-26
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E + PVIYCDNVGAT L
Sbjct: 1304 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1363
Query: 181 CSNPVFHSKMKHV 219
C+NPVFHS+MKH+
Sbjct: 1364 CANPVFHSRMKHI 1376
Score = 55.1 bits (131), Expect(2) = 2e-26
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
A+DYHFIR QVQ G + V +V DQLAD LTKPLSR+ F
Sbjct: 1377 AIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1416
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 90.5 bits (223), Expect(2) = 2e-26
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +1
Query: 1 MSWSSKKQRTVARSSTEAEYRTVAMTATEXXXXXXXXXXXXXXXPQQPVIYCDNVGATSL 180
+SWSSKKQ+ V RSSTEAEYR+VA T++E PVIYCDNVGAT L
Sbjct: 1196 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1255
Query: 181 CSNPVFHSKMKHVGS*LSFH 240
C+NPVFHS+MKH+ L +H
Sbjct: 1256 CANPVFHSRMKHIA--LDYH 1273
Score = 54.7 bits (130), Expect(2) = 2e-26
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2
Query: 221 ALDYHFIREQVQQGHMCVTYVPLEDQLADDLTKPLSRSRF 340
ALDYHFIR QVQ G + V +V DQLAD LTKPLSR F
Sbjct: 1269 ALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1308