BLASTX nr result

ID: Mentha25_contig00050454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00050454
         (395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU23215.1| hypothetical protein MIMGU_mgv1a021597mg [Mimulus...    74   3e-11
ref|XP_006353995.1| PREDICTED: F-box protein At1g78100-like isof...    73   4e-11
ref|XP_004237895.1| PREDICTED: F-box protein At1g78100-like isof...    71   2e-10
gb|EXC06718.1| F-box protein [Morus notabilis]                         62   1e-07
ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vit...    61   1e-07
ref|XP_002513900.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>gb|EYU23215.1| hypothetical protein MIMGU_mgv1a021597mg [Mimulus guttatus]
          Length = 329

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 49/109 (44%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
 Frame = -3

Query: 282 NRVSDIKTXXXXXXXXXXXXXLVPHSDSLLLRVDRVIPPPSHDXXXXXXXXXXXXXAT-L 106
           NRVSDIKT              VP +DSLLLRVDRVI     D              T L
Sbjct: 24  NRVSDIKTLLRCRSVSRRFNSAVPQADSLLLRVDRVISSSDDDDGVSFFSALFKSLLTSL 83

Query: 105 HHLISPDAA--------------LPNSPSRILRGFEAIKSLRIELPAGD 1
           HHL+SP                  PNSPS+ILR F+AI SLRIELP+GD
Sbjct: 84  HHLVSPPPTGKQPPENPTSAAPPPPNSPSQILRSFDAIASLRIELPSGD 132


>ref|XP_006353995.1| PREDICTED: F-box protein At1g78100-like isoform X1 [Solanum
           tuberosum] gi|565374933|ref|XP_006353996.1| PREDICTED:
           F-box protein At1g78100-like isoform X2 [Solanum
           tuberosum] gi|565374935|ref|XP_006353997.1| PREDICTED:
           F-box protein At1g78100-like isoform X3 [Solanum
           tuberosum] gi|565374937|ref|XP_006353998.1| PREDICTED:
           F-box protein At1g78100-like isoform X4 [Solanum
           tuberosum]
          Length = 340

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
 Frame = -3

Query: 282 NRVSDIKTXXXXXXXXXXXXXLVPHSDSLLLRVDRVIPPPSHDXXXXXXXXXXXXXA--T 109
           N++SDIKT             LVP +DSLLLRVDRVI     D                +
Sbjct: 24  NQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISATDSDDDDDSFLIAFLRSIIKS 83

Query: 108 LHHLISPDAALP------NSPSRILRGFEAIKSLRIELPAGD 1
           LHHL+SP  ALP      NSP++ILR FE I++L+IELP+GD
Sbjct: 84  LHHLVSPSKALPSPARSQNSPAQILREFERIRNLQIELPSGD 125


>ref|XP_004237895.1| PREDICTED: F-box protein At1g78100-like isoform 1 [Solanum
           lycopersicum] gi|460384393|ref|XP_004237896.1|
           PREDICTED: F-box protein At1g78100-like isoform 2
           [Solanum lycopersicum]
          Length = 340

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
 Frame = -3

Query: 282 NRVSDIKTXXXXXXXXXXXXXLVPHSDSLLLRVDRVIPPPSHDXXXXXXXXXXXXXA--T 109
           N++SDIKT             LVP +DSLLLRVDRVI     D                +
Sbjct: 24  NQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISATDSDDDDDSFLIAFLRSIIKS 83

Query: 108 LHHLISPDAALP------NSPSRILRGFEAIKSLRIELPAGD 1
           +HHL+SP   LP      NSP++ILR FE I++L+IELP+GD
Sbjct: 84  IHHLVSPSKVLPTPARSQNSPAQILREFERIRNLQIELPSGD 125


>gb|EXC06718.1| F-box protein [Morus notabilis]
          Length = 348

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
 Frame = -3

Query: 282 NRVSDIKTXXXXXXXXXXXXXLVPHSDSLLLRVDRVIPPPSHDXXXXXXXXXXXXXA--- 112
           N VSDIKT             LVP ++SLLL+VD V+ P S D             +   
Sbjct: 17  NSVSDIKTLLRCRAVCQRFNSLVPQTESLLLKVDCVVSPDSADRDGDDSFLFTFLKSILK 76

Query: 111 TLHHLISPDAAL--------PNSPSRILRGFEAIKSLRIELPAGD 1
           +LH L+SP+            NSPS+ILRGF+ +++L IELP+GD
Sbjct: 77  SLHDLVSPNPLSNPSSLKPPQNSPSQILRGFDRVRNLEIELPSGD 121


>ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vitis vinifera]
          Length = 320

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = -3

Query: 282 NRVSDIKTXXXXXXXXXXXXXLVPHSDSLLLRVDRVIPPPSHDXXXXXXXXXXXXXATLH 103
           N V+DIKT             LVP +++L+L+VDRVI   S                +LH
Sbjct: 22  NSVADIKTLIRCRAVSKRFNSLVPQAETLVLKVDRVISTDSDGSFFLSFLKSIFR--SLH 79

Query: 102 HLISPDAALP------NSPSRILRGFEAIKSLRIELPAGD 1
           H+ISP + LP      NSP++ILRGF+ I++L IELP GD
Sbjct: 80  HIISPKS-LPIQPRPHNSPTQILRGFDRIRNLEIELPGGD 118


>ref|XP_002513900.1| conserved hypothetical protein [Ricinus communis]
           gi|223546986|gb|EEF48483.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
 Frame = -3

Query: 282 NRVSDIKTXXXXXXXXXXXXXLVPHSDSLLLRVDRVIPPPSHDXXXXXXXXXXXXXATLH 103
           N VS IKT             LVP ++SLLL VDRVI   S D              ++H
Sbjct: 17  NSVSHIKTLIRCRSVSKRFNSLVPQTESLLLTVDRVISTES-DTEILLLAFLKSLLKSIH 75

Query: 102 HLISPDAALP--------NSPSRILRGFEAIKSLRIELPAGD 1
            L  PD   P        N+P++IL  FE I+ L IELPAGD
Sbjct: 76  DLFKPDEEKPIQNVNLTQNTPAQILSRFERIRDLEIELPAGD 117


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