BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00049928
         (757 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU26132.1| hypothetical protein MIMGU_mgv1a002830mg [Mimulus...   320   3e-85
gb|EPS70033.1| hypothetical protein M569_04727 [Genlisea aurea]       266   4e-69
ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containi...   265   1e-68
ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containi...   264   3e-68
ref|XP_007216986.1| hypothetical protein PRUPE_ppa002596mg [Prun...   256   5e-66
ref|XP_004306013.1| PREDICTED: pentatricopeptide repeat-containi...   256   6e-66
ref|XP_006371589.1| pentatricopeptide repeat-containing family p...   256   8e-66
emb|CBI28908.3| unnamed protein product [Vitis vinifera]              255   1e-65
ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citr...   251   3e-64
ref|XP_006306944.1| hypothetical protein CARUB_v10008524mg [Caps...   251   3e-64
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,...   251   3e-64
ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi...   250   3e-64
ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi...   250   3e-64
ref|XP_006418224.1| hypothetical protein EUTSA_v10007014mg [Eutr...   249   7e-64
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar...   247   3e-63
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]           247   3e-63
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...   246   5e-63
ref|XP_007028826.1| Pentatricopeptide repeat (PPR-like) superfam...   233   4e-59
ref|XP_007043532.1| Pentatricopeptide repeat (PPR-like) superfam...   228   1e-57
gb|EXB62273.1| hypothetical protein L484_022161 [Morus notabilis]     221   2e-55

>gb|EYU26132.1| hypothetical protein MIMGU_mgv1a002830mg [Mimulus guttatus]
          Length = 633

 Score =  320 bits (821), Expect = 3e-85
 Identities = 158/250 (63%), Positives = 190/250 (76%), Gaps = 2/250 (0%)
 Frame = -3

Query: 749 NATPVISSRKHSSIKFASSFTP-LPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXX 573
           +A P    R++SS   +SSFTP LPPPEWVQP  DLSD+IS+D     + SPWVPK+   
Sbjct: 11  SAIPTFLKREYSSS--SSSFTPPLPPPEWVQPLNDLSDLISSDPKPDLKPSPWVPKILHF 68

Query: 572 XXXXXXXXQ-DLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAH 396
                   + DLTLFC KYLI+LPPTF A+IL      PN  E+AFRFF WA  QKGY+H
Sbjct: 69  LQTTTTTLEQDLTLFCKKYLIKLPPTFVAYILKKSDHLPNCPESAFRFFNWASNQKGYSH 128

Query: 395 NLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVW 216
           NLEC+V +IEILC +  FD  K VFNE++SKG  MN+ AANSLIRSFGNGGMVEEL+WVW
Sbjct: 129 NLECYVFLIEILCSDCQFDRIKFVFNELQSKGFLMNAYAANSLIRSFGNGGMVEELLWVW 188

Query: 215 KKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNS 36
           ++M +NG++P+LYTYNFLMNGLV+  +IESAERV EVMENG VKPDVVTYNTMIKGYC S
Sbjct: 189 RRMNENGVDPSLYTYNFLMNGLVSSNFIESAERVFEVMENGKVKPDVVTYNTMIKGYCKS 248

Query: 35  GNVRKAIDMF 6
           GN+++A+  F
Sbjct: 249 GNLKRAVVKF 258



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 44/163 (26%), Positives = 80/163 (49%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A ++F +  K    A N   +  +I+ L      + A+ 
Sbjct: 373 PDEVTYGVVVNSLCKNGRLEEAMQWFDYC-KLNNVAINAVIYSSLIDGLGKAKRLEEAEE 431

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F +M   G   +S   N+LI +F   G ++E + ++K+M+D   + T+YT+  L+NGL 
Sbjct: 432 LFEDMVKNGCTRDSYCYNALIDAFAKTGKIDEALALFKQMEDEDCDQTVYTFTILINGLF 491

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++ +VM +  + P    +  +  G C SG V +A
Sbjct: 492 KERRNEEALKMWDVMIDKGITPTAACFRALSTGLCLSGKVGRA 534


>gb|EPS70033.1| hypothetical protein M569_04727 [Genlisea aurea]
          Length = 634

 Score =  266 bits (681), Expect = 4e-69
 Identities = 133/251 (52%), Positives = 173/251 (68%), Gaps = 5/251 (1%)
 Frame = -3

Query: 740 PVISSRKHSSIKFASSFTPLPPPEWVQPFTDLSDVI-----SADANSHRQISPWVPKVXX 576
           P    R H+      SF  +PPPEWVQPFTDLS++I      A+  +  ++SPWVPK+  
Sbjct: 17  PFTRHRGHTRKPDYRSFAAVPPPEWVQPFTDLSELIVPPPPDAEPTAALRLSPWVPKILA 76

Query: 575 XXXXXXXXXQDLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAH 396
                     DLTLFC KYLIRLPP+F +++L N    P   ET+FRFF WAG+Q+GY+H
Sbjct: 77  VLRSGAVEQ-DLTLFCRKYLIRLPPSFVSYVLKNSDHPP---ETSFRFFLWAGRQEGYSH 132

Query: 395 NLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVW 216
           NL+C+VH+IE L    D  G KS+F+  +SK   +   +A+SL+RS G   MVEEL+WVW
Sbjct: 133 NLDCYVHLIETLSSGGDHAGTKSIFDLFRSKSFPLTPRSADSLVRSLGAASMVEELLWVW 192

Query: 215 KKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNS 36
           K+MKD+GI+PTLYTYN LMN LV C +I SAE+VL  M  G VKPDVVTYNT++KGYC +
Sbjct: 193 KEMKDHGIDPTLYTYNSLMNALVGCSFIASAEQVLAAMLAGKVKPDVVTYNTIMKGYCKT 252

Query: 35  GNVRKAIDMFQ 3
           G+VRKA++ F+
Sbjct: 253 GSVRKAMERFR 263



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 43/163 (26%), Positives = 78/163 (47%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T   ++N +    R + A R+F     ++    N   +  +I+ L      + A+ 
Sbjct: 377 PDEVTHGAIVNGLCKNGRLDDALRWFEDCQVRR----NPVIYSSLIDALGKAGRVEEAER 432

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F EM + G   +S   N+LI +    G  EE + ++++M  +G +PT+YT+  +++GL 
Sbjct: 433 LFEEMAAGGCPRDSYCYNALIDALAKSGRTEEALSLFRRMGSDGCDPTVYTFTIMIDGLF 492

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A +V   M +G V P+   +  +  G C SG V +A
Sbjct: 493 RARRNEEALKVWNSMVDGGVTPNAAAFRALSTGLCLSGKVARA 535


>ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565401005|ref|XP_006366007.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565401007|ref|XP_006366008.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X3 [Solanum tuberosum]
           gi|565401009|ref|XP_006366009.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X4 [Solanum tuberosum]
           gi|565401011|ref|XP_006366010.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X5 [Solanum tuberosum]
          Length = 711

 Score =  265 bits (678), Expect = 1e-68
 Identities = 131/238 (55%), Positives = 171/238 (71%)
 Frame = -3

Query: 716 SSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDLT 537
           S  K+  + + LPPPEWVQPF DLSD+++       + SPWV ++           Q+L 
Sbjct: 103 SKPKWVYTGSNLPPPEWVQPFIDLSDLVTD--RKDLKPSPWVSQILNLLDNSPLMEQNLD 160

Query: 536 LFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILC 357
           ++C K+LI+L P+F A++L +      + + AFRFF WAGKQKGYAHN EC+V +++IL 
Sbjct: 161 VYCCKFLIKLSPSFVAYVLKSDY-LTGKPDIAFRFFYWAGKQKGYAHNCECYVFLVKILS 219

Query: 356 LESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLY 177
              + D  K VF+E K KG  MN  A NSLIRSFG  GMVEEL++VW++MK+NGIEP+LY
Sbjct: 220 ASRELDRIKHVFSEFKHKGFLMNVAAVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLY 279

Query: 176 TYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
           TYNFLMNGLVN M+IESAERV EVME+G V PD+VTYNTMIKGYC SG ++KA++ F+
Sbjct: 280 TYNFLMNGLVNSMFIESAERVFEVMESGKVNPDIVTYNTMIKGYCRSGKLQKAMEKFR 337



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 43/163 (26%), Positives = 83/163 (50%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R + A ++  +  K+   A N   +  +I+ L      D A+ 
Sbjct: 451 PDEVTFGVIVNGLCKSERLDEAMQWLEYC-KKNNVAINAMFYSSLIDGLGKAGRVDEARE 509

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F EM  KG   +S   N+LI +    G ++E + ++K+M+D G + T+YTY  L++G+ 
Sbjct: 510 LFEEMAEKGCTRDSYCYNALIDALAKNGKIDEALVLFKRMEDEGCDETVYTYTILISGMF 569

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++  +M +  + P+  ++  +  G C+SG V +A
Sbjct: 570 KEHQNEEALKLWHMMIDKGITPNAASFRALSTGLCHSGKVARA 612



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 33/127 (25%), Positives = 63/127 (49%)
 Frame = -3

Query: 383 FVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMK 204
           ++ +++    E +FD    +++EM+ K L +   A   +I  F   G V E   V++ M 
Sbjct: 351 YMTLMQACYAEGNFDSCLGLYHEMEEKDLDIPPHAYTLVIGGFCKMGKVLEGFTVFENMI 410

Query: 203 DNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVR 24
             GI P L  Y  L++  +    ++ A R+ + M+N   +PD VT+  ++ G C S  + 
Sbjct: 411 KKGIRPNLSIYTALIDSYMKHGNLDEAMRLFDRMKNEGFEPDEVTFGVIVNGLCKSERLD 470

Query: 23  KAIDMFQ 3
           +A+   +
Sbjct: 471 EAMQWLE 477



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 31/109 (28%), Positives = 60/109 (55%)
 Frame = -3

Query: 329 SVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGL 150
           +VF  M  KG+  N +   +LI S+   G ++E + ++ +MK+ G EP   T+  ++NGL
Sbjct: 404 TVFENMIKKGIRPNLSIYTALIDSYMKHGNLDEAMRLFDRMKNEGFEPDEVTFGVIVNGL 463

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
                ++ A + LE  +   V  + + Y+++I G   +G V +A ++F+
Sbjct: 464 CKSERLDEAMQWLEYCKKNNVAINAMFYSSLIDGLGKAGRVDEARELFE 512


>ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Solanum lycopersicum]
          Length = 711

 Score =  264 bits (674), Expect = 3e-68
 Identities = 129/238 (54%), Positives = 171/238 (71%)
 Frame = -3

Query: 716 SSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDLT 537
           S  K+  + + LPPPEWVQPF DLSD+++       + SPWV ++           Q+L 
Sbjct: 103 SKPKWVFTGSNLPPPEWVQPFVDLSDLVTD--RKDLKPSPWVSQILNLLDNSPLMEQNLD 160

Query: 536 LFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILC 357
           ++C K+LI+L P+F A++L +      + + AFRFF WAGKQKGYAHN EC+V +++IL 
Sbjct: 161 VYCCKFLIKLSPSFVAYVLKSDY-LTGKPDIAFRFFYWAGKQKGYAHNCECYVFLVKILS 219

Query: 356 LESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLY 177
              + D  K VF+E K KG  MN  A NSLIRSFG  GMVEEL++VW++MK+NGIEP+LY
Sbjct: 220 ASCELDRIKHVFSEFKHKGFLMNVAAVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLY 279

Query: 176 TYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
           TYNFLMNGLVN M++ESAERV EVME+G V PD+VTYNT+IKGYC SG ++KA++ F+
Sbjct: 280 TYNFLMNGLVNSMFVESAERVFEVMESGKVNPDIVTYNTIIKGYCRSGKLQKAMEKFR 337



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 43/163 (26%), Positives = 80/163 (49%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R + A  +  +  K    A N   +  +I+ L      D A+ 
Sbjct: 451 PDEVTFGVIVNGLCKSERLDEAMLWLEYC-KNNDVAINAMFYSSLIDGLGKAGRVDEARE 509

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F EM  KG   +S   N+LI +    G ++E + ++K+M+D G + T+YTY  L++G+ 
Sbjct: 510 LFEEMAEKGCTRDSYCYNALIDALAKNGKIDEALVLFKRMEDEGCDQTVYTYTILISGMF 569

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++  +M +  + P+  ++  +  G C SG V +A
Sbjct: 570 KEHQNEEALKLWHMMIDKGITPNAASFRALSTGLCLSGKVARA 612



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 32/109 (29%), Positives = 59/109 (54%)
 Frame = -3

Query: 329 SVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGL 150
           +VF  M  KG   N +   +LI S+   G ++E + ++ +MK+ G EP   T+  ++NGL
Sbjct: 404 TVFENMIKKGFRPNLSIYTALIDSYMKHGNLDEAMRLFDRMKNEGFEPDEVTFGVIVNGL 463

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
                ++ A   LE  +N  V  + + Y+++I G   +G V +A ++F+
Sbjct: 464 CKSERLDEAMLWLEYCKNNDVAINAMFYSSLIDGLGKAGRVDEARELFE 512


>ref|XP_007216986.1| hypothetical protein PRUPE_ppa002596mg [Prunus persica]
           gi|462413136|gb|EMJ18185.1| hypothetical protein
           PRUPE_ppa002596mg [Prunus persica]
          Length = 654

 Score =  256 bits (655), Expect = 5e-66
 Identities = 129/248 (52%), Positives = 170/248 (68%), Gaps = 5/248 (2%)
 Frame = -3

Query: 731 SSRKHSSIKFASS----FT-PLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXX 567
           +S  HS+  F+S+    FT  LPPPEWV+PF D+SD++S   +     SPWV ++     
Sbjct: 36  ASSFHSTSSFSSNPRWVFTNSLPPPEWVEPFNDVSDIVSNPQDFDP--SPWVAQILNLLD 93

Query: 566 XXXXXXQDLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLE 387
                  +L  +C  +LI+L P F A++L +  +   + ETA RFF WAGKQK Y H LE
Sbjct: 94  GSQKMEANLDSYCHTFLIKLSPNFVAYVLKS-AELRGKPETALRFFAWAGKQKKYHHKLE 152

Query: 386 CFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKM 207
           C+V +I++L    D D  + V  E+K K   MNS AANSLI+SFG  GMV+EL+WVW++M
Sbjct: 153 CYVSLIDLLSSSGDLDRIRYVLAELKEKNFLMNSAAANSLIKSFGCLGMVDELLWVWRRM 212

Query: 206 KDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNV 27
           K+NGIEP+LYTYNFL+NGLVN M+IESAERV EVME G + PDVVTYNTMIKGYC +G  
Sbjct: 213 KENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMEGGKIVPDVVTYNTMIKGYCKAGKT 272

Query: 26  RKAIDMFQ 3
           +KA++ F+
Sbjct: 273 QKAMEKFR 280



 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 47/163 (28%), Positives = 83/163 (50%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A  +F++  +  G A N   +  +IE L      D A+ 
Sbjct: 394 PDVVTYGVVVNGLCKSGRVEEAMEYFQFC-EGSGMAVNAMLYSSLIEGLGKAGRLDEAER 452

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F +M  KG   +S   N+LI +   GG  +E + ++KKM++ G + T+YTY  L++GL 
Sbjct: 453 LFEKMIEKGCPQDSYCYNALIDALAKGGKTDEALALFKKMEEEGCDQTVYTYTILISGLF 512

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++ ++M +  + P   ++  +  G C SG V +A
Sbjct: 513 KEHKNEEALKLWDMMIDQGITPTAASFRALSIGLCLSGKVARA 555



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 41/127 (32%), Positives = 67/127 (52%)
 Frame = -3

Query: 383 FVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMK 204
           ++ +I+    E DFD    ++ EM+ KGL +   A + +I     GG   E   V++ M 
Sbjct: 294 YMTLIQGCYSEGDFDLCLGLYQEMEEKGLEIPPHAYSLVINGLCKGGKCMEGYAVFEDMI 353

Query: 203 DNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVR 24
             G +  +  Y  L++    C  IE A ++ + M+N  +KPDVVTY  ++ G C SG V 
Sbjct: 354 QKGCKANVANYTALIDSYAKCGSIEGAMKLFDRMKNDGLKPDVVTYGVVVNGLCKSGRVE 413

Query: 23  KAIDMFQ 3
           +A++ FQ
Sbjct: 414 EAMEYFQ 420



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 34/138 (24%), Positives = 68/138 (49%)
 Frame = -3

Query: 416 KQKGYAHNLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMV 237
           ++KG       +  +I  LC         +VF +M  KG   N     +LI S+   G +
Sbjct: 318 EEKGLEIPPHAYSLVINGLCKGGKCMEGYAVFEDMIQKGCKANVANYTALIDSYAKCGSI 377

Query: 236 EELVWVWKKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTM 57
           E  + ++ +MK++G++P + TY  ++NGL     +E A    +  E   +  + + Y+++
Sbjct: 378 EGAMKLFDRMKNDGLKPDVVTYGVVVNGLCKSGRVEEAMEYFQFCEGSGMAVNAMLYSSL 437

Query: 56  IKGYCNSGNVRKAIDMFQ 3
           I+G   +G + +A  +F+
Sbjct: 438 IEGLGKAGRLDEAERLFE 455


>ref|XP_004306013.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 656

 Score =  256 bits (654), Expect = 6e-66
 Identities = 129/245 (52%), Positives = 171/245 (69%), Gaps = 2/245 (0%)
 Frame = -3

Query: 731 SSRKHSSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHR-QISPWVPKVXXXXXXXXX 555
           +S   S+ ++ +    LPPPEWV+PF D+SDVIS+    HR   SPWVP++         
Sbjct: 42  TSTSASNSRWVAVTNSLPPPEWVEPFHDVSDVISSP---HRFDPSPWVPQILNLLDNNSP 98

Query: 554 XXQ-DLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFV 378
             + +L  +C K+LI+L P F A++L +     ++ ETA RFF WA KQ  Y H LEC+V
Sbjct: 99  QMEHNLDSYCRKFLIKLSPNFVAYVLKSD-NLRDKPETALRFFSWASKQHKYHHKLECYV 157

Query: 377 HMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDN 198
            +IEILCL  + D  K V NE++   L MN+ AANSL++SFG+ GMVEEL+WVW+ MK+N
Sbjct: 158 CLIEILCLCGELDSVKCVVNELREMRLLMNANAANSLVKSFGSVGMVEELLWVWRGMKEN 217

Query: 197 GIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
           GIEP+L+TYNFL+NGLVN M+IESAERV EVME G + PD+VTYNTMIKGYC +G   KA
Sbjct: 218 GIEPSLFTYNFLVNGLVNSMFIESAERVFEVMEGGKIVPDIVTYNTMIKGYCKAGRTPKA 277

Query: 17  IDMFQ 3
           ++ F+
Sbjct: 278 MEKFR 282



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 38/117 (32%), Positives = 61/117 (52%)
 Frame = -3

Query: 353 ESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYT 174
           E DFD   S++ EM+ K + + S A + +I     GG       V++ M   G +  +  
Sbjct: 306 EGDFDSCLSLYQEMREKRVEVPSHAYSLVINGLCKGGKCVVGFAVFEDMIQKGCKANVAN 365

Query: 173 YNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
           Y  L++    C  IE A ++ E M++  ++PD VTY  ++ G C SG V +AI+ FQ
Sbjct: 366 YTALIDSYAKCGCIEEAMKLFERMKSDGLEPDGVTYGVIVNGLCKSGRVEEAIEYFQ 422



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 44/163 (26%), Positives = 81/163 (49%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A  +F++    +  A N   +  +I+ L      D A+ 
Sbjct: 396 PDGVTYGVIVNGLCKSGRVEEAIEYFQFCQDSR-MADNAMLYSSLIDGLGKAGRVDEAER 454

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F +M  KG   +S   N+LI +    G  +E + ++KKM++ G + T+YTY  L++GL 
Sbjct: 455 LFEKMIEKGCPPDSYCYNALIDALAKCGKTDEALALFKKMEEEGCDQTVYTYTILIDGLF 514

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++ ++M +  + P   ++  +  G C SG V +A
Sbjct: 515 KEHRNEDALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARA 557



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/109 (28%), Positives = 59/109 (54%)
 Frame = -3

Query: 329 SVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGL 150
           +VF +M  KG   N     +LI S+   G +EE + ++++MK +G+EP   TY  ++NGL
Sbjct: 349 AVFEDMIQKGCKANVANYTALIDSYAKCGCIEEAMKLFERMKSDGLEPDGVTYGVIVNGL 408

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
                +E A    +  ++  +  + + Y+++I G   +G V +A  +F+
Sbjct: 409 CKSGRVEEAIEYFQFCQDSRMADNAMLYSSLIDGLGKAGRVDEAERLFE 457


>ref|XP_006371589.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550317468|gb|ERP49386.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 659

 Score =  256 bits (653), Expect = 8e-66
 Identities = 128/255 (50%), Positives = 170/255 (66%), Gaps = 12/255 (4%)
 Frame = -3

Query: 731 SSRKHSSIKFASSFTP-----------LPPPEWVQPFTDLSDVISADANSHRQISPWVPK 585
           SS KH   +   +FT            LPPPEW++PF DLSD+ S      +  SPWV +
Sbjct: 33  SSSKHPKKRPTLTFTSNSRWVFTDSNYLPPPEWIEPFNDLSDIASKPPQDLKP-SPWVHQ 91

Query: 584 VXXXXXXXXXXXQD-LTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQK 408
           +           +  L LFC+K+LI+L P F + +L + ++   R + A +FF WAGKQK
Sbjct: 92  IMSLLLDGPVDMESRLDLFCNKFLIKLSPNFVSFVLKS-MELQKRPDLALKFFTWAGKQK 150

Query: 407 GYAHNLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEEL 228
            Y HNL+C+V  I++L +  D D  KSVF + +  G  MN +AANSLI+SFG+ GMVEEL
Sbjct: 151 KYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEEL 210

Query: 227 VWVWKKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKG 48
           +WVW+ MK+NG+EP+L+TYNFL+NGLVN ++IESAERVLEVMENG + PDVVTYNTMIKG
Sbjct: 211 LWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKG 270

Query: 47  YCNSGNVRKAIDMFQ 3
           YC  G  +KA + F+
Sbjct: 271 YCQVGKTQKAFEKFR 285



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 43/163 (26%), Positives = 78/163 (47%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R + A  +  +  +  G A N   +  +I+ L        A+ 
Sbjct: 399 PDVVTYGVVVNCMCKSGRLDEAMEYLEFC-RVNGVAVNAMLYSSLIDGLGKAGRVHEAEK 457

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F EM  KG   +S   N+LI +    G ++E +  +K+M+D G + T+YTY  ++NGL 
Sbjct: 458 LFEEMVKKGCPPDSYCYNALIDALAKCGKIDEALAFFKRMEDEGCDQTVYTYTIMINGLF 517

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++ ++M +  + P    +  +  G C SG V +A
Sbjct: 518 REHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARA 560



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 41/168 (24%), Positives = 77/168 (45%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T + ++       + + AF  FR   + +  A +   ++ +I+    E DFD   S
Sbjct: 259 PDVVTYNTMIKGYCQVGKTQKAFEKFRDM-ELRNVAPDKITYMTLIQACYAEGDFDLCLS 317

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +++EM   GL +   A + +I      G   E   V++KM   G +  +  Y  L++   
Sbjct: 318 LYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNA 377

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
            C  +  A  + E M+   ++PDVVTY  ++   C SG + +A++  +
Sbjct: 378 KCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLE 425


>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  255 bits (652), Expect = 1e-65
 Identities = 125/229 (54%), Positives = 159/229 (69%)
 Frame = -3

Query: 692 FTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDLTLFCDKYLI 513
           FT   PPEWV+P  DLSD+ S   N   Q SPWV ++            +L  +C K+LI
Sbjct: 59  FTTPIPPEWVEPLYDLSDLAS---NPQPQPSPWVNQILKLLDGSVNMESNLDSYCSKFLI 115

Query: 512 RLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGA 333
           +L P F A +L +      + + AFRFF WAGKQK Y H +EC+V +I++L L SDFD  
Sbjct: 116 KLSPNFVAFVLKSDA-IRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRV 174

Query: 332 KSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNG 153
           + +F E K KG  M   AANSLIRSFG  GMVEEL+WVW++MK++GIEP+LYT+NFL+NG
Sbjct: 175 RCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNG 234

Query: 152 LVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMF 6
           LVN M+IESAERV EVME G + PDVV+YNTMIKGYC +GN +KA++ F
Sbjct: 235 LVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKF 283



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 44/163 (26%), Positives = 79/163 (48%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R + A  +F +  K    A N   +  +I+ L      D A+ 
Sbjct: 398 PDDVTYGVIVNGLCKSGRLDEAVEYFEFC-KDNEVAVNAMFYSSLIDGLGKAGRVDEAEK 456

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
            F EM  +G   +S   N+LI +    G +EE + ++K+M+  G + T+YTY  L++GL 
Sbjct: 457 FFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLF 516

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++ ++M +  + P   ++  +  G C SG V +A
Sbjct: 517 KEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARA 559



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 35/120 (29%), Positives = 58/120 (48%)
 Frame = -3

Query: 362 LCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPT 183
           LC +       SVF  M  KG   N     +LI ++G  G V E + ++++MK  G EP 
Sbjct: 340 LCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPD 399

Query: 182 LYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
             TY  ++NGL     ++ A    E  ++  V  + + Y+++I G   +G V +A   F+
Sbjct: 400 DVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFE 459


>ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citrus clementina]
           gi|568877202|ref|XP_006491635.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Citrus sinensis]
           gi|557549935|gb|ESR60564.1| hypothetical protein
           CICLE_v10014552mg [Citrus clementina]
          Length = 650

 Score =  251 bits (640), Expect = 3e-64
 Identities = 129/250 (51%), Positives = 166/250 (66%)
 Frame = -3

Query: 752 RNATPVISSRKHSSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXX 573
           RN  P+ S    S+ + A+SF   PPPEWV+PF D+SD++S   N +   SPWV ++   
Sbjct: 35  RNMGPLASFI--SNPRSANSF---PPPEWVEPFNDVSDLVSCPQNLNP--SPWVRQILNL 87

Query: 572 XXXXXXXXQDLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHN 393
                    +L  FC K+LI+L P F + +L N      R     R F WA +QK Y+HN
Sbjct: 88  LDGSSDMEANLDSFCRKFLIKLSPNFVSFVLRNH-DVSKRPNVGLRLFTWAARQKKYSHN 146

Query: 392 LECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWK 213
           LEC++ +I+ L L  D D  + VFNE+K KG  M  +AANSLI+SFG  GMVEEL+WVW+
Sbjct: 147 LECYISLIDCLALCGDVDRVRLVFNELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWR 206

Query: 212 KMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSG 33
            MK+NGIEP+LYTYNFLMNGLVN M+IES+E V +VMENG V PD VTYNTMIKGYC  G
Sbjct: 207 SMKENGIEPSLYTYNFLMNGLVNSMFIESSELVFKVMENGKVGPDGVTYNTMIKGYCKVG 266

Query: 32  NVRKAIDMFQ 3
             +KA++ F+
Sbjct: 267 KTQKAMEKFR 276



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 45/163 (27%), Positives = 81/163 (49%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++  +    R E A ++F +  +  G A N   +  +I+ L      D A+ 
Sbjct: 390 PDDVTYRVIVGGLCKNERLEEAMQYFEFC-RANGVAVNAMFYSSLIDGLGKAGRVDEAEE 448

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F EM  KG   +S   N LI +    G ++E + ++K+M+D G + T+YTY  L+NG+ 
Sbjct: 449 LFEEMVEKGCPRDSYCYNVLIDALAKCGKLDEALALFKRMEDEGCDQTVYTYTILINGMF 508

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++ ++M +  + P   ++  +  G C SG V +A
Sbjct: 509 KEHRNEEALKLWDMMIDKGITPTAASFRALSIGLCLSGKVARA 551



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 35/127 (27%), Positives = 63/127 (49%)
 Frame = -3

Query: 383 FVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMK 204
           ++ +I+   LE DFD   S+++EM  KG+ + S A N +I      G   E   +++ M 
Sbjct: 290 YMTLIQACYLEGDFDSCLSLYHEMDEKGIEIPSHAYNLVIGGLCKVGKCIEGHAIFESMI 349

Query: 203 DNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVR 24
             G +P +  Y  L++       +  A  + E M+   V+PD VTY  ++ G C +  + 
Sbjct: 350 RRGCQPNVAIYTALIDSYAKLGSMNEAINIFERMKYEGVEPDDVTYRVIVGGLCKNERLE 409

Query: 23  KAIDMFQ 3
           +A+  F+
Sbjct: 410 EAMQYFE 416


>ref|XP_006306944.1| hypothetical protein CARUB_v10008524mg [Capsella rubella]
           gi|482575655|gb|EOA39842.1| hypothetical protein
           CARUB_v10008524mg [Capsella rubella]
          Length = 663

 Score =  251 bits (640), Expect = 3e-64
 Identities = 125/243 (51%), Positives = 170/243 (69%)
 Frame = -3

Query: 740 PVISSRKHSSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXX 561
           P+ SSR  +S+++  +   LPPPEWV+PF D+SD++ ++ N   Q SPWV ++       
Sbjct: 42  PLSSSR--TSVRWVFNSISLPPPEWVEPFNDVSDLVKSNRNL--QPSPWVSQILNLLDGS 97

Query: 560 XXXXQDLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECF 381
                +L  FC K+LI+L P F + +L N  +   +   A+RFF WAGKQK Y HNLEC+
Sbjct: 98  DSMESNLDGFCRKFLIKLSPNFVSFVL-NSDEIQEKPIIAWRFFGWAGKQKKYWHNLECY 156

Query: 380 VHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKD 201
           V ++++L L  D D  + + +E++     M   AAN+LI+SFG  GMVEEL+WVW+KMK+
Sbjct: 157 VSLVDVLALAKDVDRIRFLCSEIRKFEFPMTVAAANALIKSFGKLGMVEELLWVWRKMKE 216

Query: 200 NGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRK 21
           NGIEPTLYTYNFLMNGLV+ M+I+SAERV  VME+G +KPDVVTYNTMIKGYC +G  +K
Sbjct: 217 NGIEPTLYTYNFLMNGLVSSMFIDSAERVFGVMESGRIKPDVVTYNTMIKGYCKTGQTQK 276

Query: 20  AID 12
           AI+
Sbjct: 277 AIE 279



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A  +F+   +  G+A N   +  +I+ L      D A+ 
Sbjct: 396 PDVVTYSVVVNGLCKNGRVEEALDYFQTC-RFNGFAINSMFYSSLIDGLGKAGRIDEAER 454

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDN-GIEPTLYTYNFLMNGL 150
           +F EM  KG   +S   N+LI +    G V+E + ++K+M++  G + T+YTY  L++G+
Sbjct: 455 LFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGM 514

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                 E A ++ ++M +  + P    +  +  G C SG V +A
Sbjct: 515 FKDHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 558



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 38/127 (29%), Positives = 66/127 (51%)
 Frame = -3

Query: 383 FVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMK 204
           ++ +I+    +SDF    +++ EM  KG+ +     + +I      G + E   V++ M 
Sbjct: 296 YMTVIQACYADSDFGSCVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMI 355

Query: 203 DNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVR 24
             G +P +  Y  L++G      +E A R+L  M +   KPDVVTY+ ++ G C +G V 
Sbjct: 356 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 415

Query: 23  KAIDMFQ 3
           +A+D FQ
Sbjct: 416 EALDYFQ 422


>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 647

 Score =  251 bits (640), Expect = 3e-64
 Identities = 122/237 (51%), Positives = 162/237 (68%), Gaps = 2/237 (0%)
 Frame = -3

Query: 716 SSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQI--SPWVPKVXXXXXXXXXXXQD 543
           S+ ++  +   LPPPEW+ PF DLSDV S    +H+ +  SPWV ++            +
Sbjct: 38  SNRRWVFTSNSLPPPEWIDPFVDLSDVAS---RTHQDLKPSPWVNQILALLDGSSNMESN 94

Query: 542 LTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEI 363
           L  FC  +LI+L P+F + IL +  +   + + A RFF WAGKQK Y HNLEC+V +I++
Sbjct: 95  LDTFCHMFLIKLSPSFVSFILRS-TELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDV 153

Query: 362 LCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPT 183
           L      D  KSVF++ K  GL M   ++NSLI+SFGN GMVEE++WVW++MK+NGIEP+
Sbjct: 154 LATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPS 213

Query: 182 LYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAID 12
           L++YNFL+NGLVN  +IESAERV EVMENG + PDVVTYNTMIKGYC  G  RKA +
Sbjct: 214 LFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFE 270



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 44/163 (26%), Positives = 77/163 (47%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R + A  +  +    KG A N   +  +I+ L      D A+ 
Sbjct: 387 PDEVTYGVIVNSLCKSGRLDEALEYMEFCSG-KGVAVNAMFYSSLIDGLGKSGRVDEAER 445

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F EM  KG   +S   N+LI +    G ++E + + K+M+ +G + T+YTY  L+ GL 
Sbjct: 446 IFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLF 505

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A  + ++M +  + P    +  +  G C SG V +A
Sbjct: 506 REHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARA 548


>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  250 bits (639), Expect = 3e-64
 Identities = 119/237 (50%), Positives = 164/237 (69%)
 Frame = -3

Query: 713 SIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDLTL 534
           + +F  + T LPPPEW++PF D+SDVIS+  +     SPWV ++            +L  
Sbjct: 46  NFRFVFTNTLLPPPEWIEPFVDVSDVISS--SQPLDPSPWVAQILNLLDGSSNMEHNLDS 103

Query: 533 FCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCL 354
           FC K+ ++L P F   +L + V+   + E A RFF WAGKQK Y H +EC V +IE+L  
Sbjct: 104 FCRKFFVKLSPNFVTFVLQS-VELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTF 162

Query: 353 ESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYT 174
            +D    + VF E+K +GL M  +AANSLI+SFGN G+VEEL+WVW++MK+NGI+P+LYT
Sbjct: 163 SADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYT 222

Query: 173 YNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
           YNFL+NGLVN M+IESAE+V EVM+ G + PD VTYN MIKGYC +G ++KA++ F+
Sbjct: 223 YNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFR 279



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 34/120 (28%), Positives = 60/120 (50%)
 Frame = -3

Query: 362 LCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPT 183
           LC +     A +VF  M  KG   N     +LI S+   G +EE + ++++MK+ G EP 
Sbjct: 335 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 394

Query: 182 LYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
             TY+ L+NGL     ++    + +   N  V  + + Y ++I G   +G +  A ++F+
Sbjct: 395 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFE 454



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/168 (24%), Positives = 77/168 (45%)
 Frame = -3

Query: 509 LPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAK 330
           +P T T +I++       + + A   FR   + K    +   ++ +I+    E DFD   
Sbjct: 252 VPDTVTYNIMIKGYCKAGKLQKAMEKFRDM-EMKNVKPDKITYMTLIQACYSERDFDTCL 310

Query: 329 SVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGL 150
           S++ EM+ +GL +   + + +I          E   V++ M   G    +  Y  L++  
Sbjct: 311 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSY 370

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMF 6
                +E A R+ E M+N   +PD VTY+ ++ G C SG +   +++F
Sbjct: 371 SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 418


>ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  250 bits (639), Expect = 3e-64
 Identities = 119/237 (50%), Positives = 164/237 (69%)
 Frame = -3

Query: 713 SIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDLTL 534
           + +F  + T LPPPEW++PF D+SDVIS+  +     SPWV ++            +L  
Sbjct: 44  NFRFVFTNTLLPPPEWIEPFVDVSDVISS--SQPLDPSPWVAQILNLLDGSSNMEHNLDS 101

Query: 533 FCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCL 354
           FC K+ ++L P F   +L + V+   + E A RFF WAGKQK Y H +EC V +IE+L  
Sbjct: 102 FCRKFFVKLSPNFVTFVLQS-VELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTF 160

Query: 353 ESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYT 174
            +D    + VF E+K +GL M  +AANSLI+SFGN G+VEEL+WVW++MK+NGI+P+LYT
Sbjct: 161 SADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYT 220

Query: 173 YNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
           YNFL+NGLVN M+IESAE+V EVM+ G + PD VTYN MIKGYC +G ++KA++ F+
Sbjct: 221 YNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFR 277



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 34/120 (28%), Positives = 60/120 (50%)
 Frame = -3

Query: 362 LCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPT 183
           LC +     A +VF  M  KG   N     +LI S+   G +EE + ++++MK+ G EP 
Sbjct: 333 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 392

Query: 182 LYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
             TY+ L+NGL     ++    + +   N  V  + + Y ++I G   +G +  A ++F+
Sbjct: 393 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFE 452



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/168 (24%), Positives = 77/168 (45%)
 Frame = -3

Query: 509 LPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAK 330
           +P T T +I++       + + A   FR   + K    +   ++ +I+    E DFD   
Sbjct: 250 VPDTVTYNIMIKGYCKAGKLQKAMEKFRDM-EMKNVKPDKITYMTLIQACYSERDFDTCL 308

Query: 329 SVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGL 150
           S++ EM+ +GL +   + + +I          E   V++ M   G    +  Y  L++  
Sbjct: 309 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSY 368

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMF 6
                +E A R+ E M+N   +PD VTY+ ++ G C SG +   +++F
Sbjct: 369 SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 416


>ref|XP_006418224.1| hypothetical protein EUTSA_v10007014mg [Eutrema salsugineum]
           gi|557095995|gb|ESQ36577.1| hypothetical protein
           EUTSA_v10007014mg [Eutrema salsugineum]
          Length = 661

 Score =  249 bits (636), Expect = 7e-64
 Identities = 122/233 (52%), Positives = 162/233 (69%)
 Frame = -3

Query: 710 IKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDLTLF 531
           ++   S + LPPPEW++PF D+SD++ +  N   Q SPWV ++            +L  F
Sbjct: 49  VRCVFSSSSLPPPEWIEPFNDVSDLVKSTGNL--QPSPWVSQILNLLDGSDSMESNLDGF 106

Query: 530 CDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLE 351
           C K+LI+L P F A +L +  +       A+RFF WAGKQK Y H LEC+V ++++L L 
Sbjct: 107 CRKFLIKLSPNFVAFVLKSD-EIREIPGVAWRFFCWAGKQKKYTHKLECYVSLVDVLALA 165

Query: 350 SDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTY 171
            D D  + V +E++     MN +AANSLI+SFG  GMVEEL+WVW+KMK+NGIEPTLYTY
Sbjct: 166 KDVDRIRFVCSEIRRFEFPMNVSAANSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTY 225

Query: 170 NFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAID 12
           NFLMNGLV+ M+I+SAERV EVME G +KPDVVTYNTMIKGYC +G  +KA++
Sbjct: 226 NFLMNGLVSSMFIDSAERVFEVMEGGRIKPDVVTYNTMIKGYCKAGQTQKAME 278



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A   F    + KG A N   +  +I+ L      D A+ 
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALHCFDTC-RFKGLAINSMFYSSLIDGLGKAGRVDEAER 453

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDN-GIEPTLYTYNFLMNGL 150
           +F EM  KG   +S   N+LI +F   G V+E + ++K+M++  G + T+YTY  L++G+
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKSGKVDEALGLFKRMEEEEGCDQTVYTYTILISGM 513

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                 E A  + ++M +  + P    +  +  G C SG V +A
Sbjct: 514 FKEHRNEEALELWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 37/126 (29%), Positives = 65/126 (51%)
 Frame = -3

Query: 383 FVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMK 204
           ++ MI+    +SDF    +++ EM  KG+ +   A + +I      G + E   V++ M 
Sbjct: 295 YMTMIQACYADSDFSSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGHAVFENMV 354

Query: 203 DNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVR 24
             G +P +  Y  L++G      +E A  +L+ M N   +PDVVTY+ ++ G C +G V 
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKYGSVEDAIGLLQRMINEGFEPDVVTYSVVVNGLCKNGRVE 414

Query: 23  KAIDMF 6
           +A+  F
Sbjct: 415 EALHCF 420


>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
           gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
           [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score =  247 bits (631), Expect = 3e-63
 Identities = 119/244 (48%), Positives = 172/244 (70%)
 Frame = -3

Query: 743 TPVISSRKHSSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXX 564
           +P+ SSR  +S+++  + + LPPPEW++PF D+SD++ ++ N     SPWV ++      
Sbjct: 40  SPLSSSR--TSVRWVFNSSSLPPPEWIEPFNDVSDLVKSNRNLLP--SPWVSQILNLLDG 95

Query: 563 XXXXXQDLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLEC 384
                 +L  FC K+LI+L P F + +L +  +   + + A+ FF W+ KQK Y HNLEC
Sbjct: 96  SASMESNLDGFCRKFLIKLSPNFVSFVLKSD-EIREKPDIAWSFFCWSRKQKKYTHNLEC 154

Query: 383 FVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMK 204
           +V ++++L L  D D  + V +E+K     M  +AAN+LI+SFG  GMVEEL+WVW+KMK
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214

Query: 203 DNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVR 24
           +NGIEPTLYTYNFLMNGLV+ M+++SAERV EVME+G +KPD+VTYNTMIKGYC +G  +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274

Query: 23  KAID 12
           KA++
Sbjct: 275 KAME 278



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 40/135 (29%), Positives = 70/135 (51%)
 Frame = -3

Query: 410 KGYAHNLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEE 231
           +G+  +   ++ MI+    +SDF    +++ EM  KG+ +   A + +I      G + E
Sbjct: 286 RGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNE 345

Query: 230 LVWVWKKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIK 51
              V++ M   G +P +  Y  L++G      +E A R+L  M +   KPDVVTY+ ++ 
Sbjct: 346 GYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405

Query: 50  GYCNSGNVRKAIDMF 6
           G C +G V +A+D F
Sbjct: 406 GLCKNGRVEEALDYF 420



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A  +F    +  G A N   +  +I+ L      D A+ 
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAINSMFYSSLIDGLGKAGRVDEAER 453

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDN-GIEPTLYTYNFLMNGL 150
           +F EM  KG   +S   N+LI +F     V+E + ++K+M++  G + T+YTY  L++G+
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 513

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                 E A ++ ++M +  + P    +  +  G C SG V +A
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557


>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  247 bits (631), Expect = 3e-63
 Identities = 119/244 (48%), Positives = 172/244 (70%)
 Frame = -3

Query: 743 TPVISSRKHSSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXX 564
           +P+ SSR  +S+++  + + LPPPEW++PF D+SD++ ++ N     SPWV ++      
Sbjct: 22  SPLSSSR--TSVRWVFNSSSLPPPEWIEPFNDVSDLVKSNRNLLP--SPWVSQILNLLDG 77

Query: 563 XXXXXQDLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLEC 384
                 +L  FC K+LI+L P F + +L +  +   + + A+ FF W+ KQK Y HNLEC
Sbjct: 78  SASMESNLDGFCRKFLIKLSPNFVSFVLKSD-EIREKPDIAWSFFCWSRKQKKYTHNLEC 136

Query: 383 FVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMK 204
           +V ++++L L  D D  + V +E+K     M  +AAN+LI+SFG  GMVEEL+WVW+KMK
Sbjct: 137 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 196

Query: 203 DNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVR 24
           +NGIEPTLYTYNFLMNGLV+ M+++SAERV EVME+G +KPD+VTYNTMIKGYC +G  +
Sbjct: 197 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 256

Query: 23  KAID 12
           KA++
Sbjct: 257 KAME 260



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 40/135 (29%), Positives = 70/135 (51%)
 Frame = -3

Query: 410 KGYAHNLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEE 231
           +G+  +   ++ MI+    +SDF    +++ EM  KG+ +   A + +I      G + E
Sbjct: 268 RGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNE 327

Query: 230 LVWVWKKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIK 51
              V++ M   G +P +  Y  L++G      +E A R+L  M +   KPDVVTY+ ++ 
Sbjct: 328 GYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 387

Query: 50  GYCNSGNVRKAIDMF 6
           G C +G V +A+D F
Sbjct: 388 GLCKNGRVEEALDYF 402



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A  +F    +  G A N   +  +I+ L      D A+ 
Sbjct: 377 PDVVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAINSMFYSSLIDGLGKAGRVDEAER 435

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDN-GIEPTLYTYNFLMNGL 150
           +F EM  KG   +S   N+LI +F     V+E + ++K+M++  G + T+YTY  L++G+
Sbjct: 436 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 495

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                 E A ++ ++M +  + P    +  +  G C SG V +A
Sbjct: 496 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 539


>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score =  246 bits (629), Expect = 5e-63
 Identities = 118/243 (48%), Positives = 170/243 (69%)
 Frame = -3

Query: 740 PVISSRKHSSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXX 561
           P+ SSR  +S+++  + + LPPPEW++PF D+SD++ ++ N   Q SPWV ++       
Sbjct: 41  PLSSSR--TSVRWVFNSSSLPPPEWIEPFNDVSDLVKSNRNL--QPSPWVSQILNLLDGS 96

Query: 560 XXXXQDLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECF 381
                +L  FC K+LI+L P F + +L +  +   + + A+ FF W+ KQK Y HNLEC+
Sbjct: 97  ASMESNLDGFCRKFLIKLSPNFVSFVLKSD-EIREKPDIAWSFFCWSRKQKKYTHNLECY 155

Query: 380 VHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKD 201
           V ++++L L  D D  + + +E++     M  +  NSLI+SFG  GMVEEL+WVW+KMK+
Sbjct: 156 VSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKE 215

Query: 200 NGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRK 21
           NGIEPTLYTYNFLMNGLV+ M+++SAERV EVME+G +KPDVVTYNTMIKGYC +G  +K
Sbjct: 216 NGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQK 275

Query: 20  AID 12
           A++
Sbjct: 276 ALE 278



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 42/136 (30%), Positives = 69/136 (50%)
 Frame = -3

Query: 410 KGYAHNLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEE 231
           KG   +   ++ MI+    +SDF    +++ EM  KGL +   A + +I      G + E
Sbjct: 286 KGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNE 345

Query: 230 LVWVWKKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIK 51
              V++ M   G +P +  Y  L++G      +E A R+L  M +    PDVVTY+ ++ 
Sbjct: 346 GYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVN 405

Query: 50  GYCNSGNVRKAIDMFQ 3
           G C +G V +A+D FQ
Sbjct: 406 GLCKNGRVEEAMDYFQ 421



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T  +++N +    R E A  +F+   +  G A N   +  +I+ L      D A+ 
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEAMDYFQTC-RFNGLAINSMFYSSLIDGLGKAGRVDEAER 453

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDN-GIEPTLYTYNFLMNGL 150
           +F EM  KG   +S   N+LI +F   G V+E + ++K+M++  G + T+YTY  L++G+
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGM 513

Query: 149 VNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                 E A ++ ++M +  + P       +  G C SG V +A
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARA 557


>ref|XP_007028826.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508717431|gb|EOY09328.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 654

 Score =  233 bits (595), Expect = 4e-59
 Identities = 115/236 (48%), Positives = 157/236 (66%), Gaps = 2/236 (0%)
 Frame = -3

Query: 713 SIKFASSFTP--LPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDL 540
           SI     FTP  LPPPEW++PF ++S + S       Q SPWV K+            +L
Sbjct: 44  SISSRFIFTPSYLPPPEWIEPFFNVSGLASTFPQD-LQPSPWVSKIVNLLDGCSNMESNL 102

Query: 539 TLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEIL 360
             FC K+LI+L P F A +L +  +  N+ + A RFF WA KQK Y H LEC+V MI +L
Sbjct: 103 DSFCHKFLIQLSPNFVAFVLAS-AEVQNKPDVALRFFAWAAKQKKYTHKLECYVSMINVL 161

Query: 359 CLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTL 180
            L +D    + +F ++K  G+ M  ++ANSLI++F   GMVEEL+WVW++MK+N IEP+L
Sbjct: 162 ALANDLVKVRFLFGQLKEMGIVMTMSSANSLIKNFVGLGMVEELLWVWRRMKENEIEPSL 221

Query: 179 YTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAID 12
           YT+N L+NGLVN M+IESAE+V +VMEN  ++PDVV+YNTMIKGYC +G   KA++
Sbjct: 222 YTFNLLLNGLVNSMFIESAEQVFKVMENSKIRPDVVSYNTMIKGYCKAGKTHKAME 277



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 40/155 (25%), Positives = 75/155 (48%)
 Frame = -3

Query: 482 LMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKSVFNEMKSK 303
           ++N +    R + A  + R+  +    A N   +  +I+ L      D A+ +F EM  K
Sbjct: 402 IVNGLCKSGRLDEAMEYLRFC-RANEVAINAMFYCSLIDGLGKAGRVDEAQKLFEEMVEK 460

Query: 302 GLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLVNCMYIESA 123
               +S   N+LI +    G V + + ++ +M+D G + T+YTY  L++GL      E A
Sbjct: 461 DCPRDSYCYNALIDALAKCGRVNDALTLFNRMEDEGCDQTVYTYTILISGLFREHKNEEA 520

Query: 122 ERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
            ++ ++M +  + P   ++  +  G C SG V +A
Sbjct: 521 MKLWDMMIDKGITPTAASFRALSIGLCLSGKVTRA 555


>ref|XP_007043532.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508707467|gb|EOX99363.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 621

 Score =  228 bits (582), Expect = 1e-57
 Identities = 111/238 (46%), Positives = 155/238 (65%)
 Frame = -3

Query: 716 SSIKFASSFTPLPPPEWVQPFTDLSDVISADANSHRQISPWVPKVXXXXXXXXXXXQDLT 537
           SS +F  + + LPPPEW++PF  +S + S       Q SPWV K+            +L 
Sbjct: 46  SSSRFIFTPSNLPPPEWIEPFFKVSGLASIFPRD-LQPSPWVSKIVNLLDGSSNMELNLY 104

Query: 536 LFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILC 357
            FC K+ I+L P F A +L + V+  N+ + A RF  WA KQK Y H LEC+V MI +L 
Sbjct: 105 SFCHKFSIQLSPNFVAFVLAS-VEVQNKPDVALRFLTWAAKQKKYTHKLECYVSMINVLA 163

Query: 356 LESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLY 177
           L +D    + +F ++K  G  M  ++ANSLI++ G  GMVEEL+WVW++MK+N IEP+LY
Sbjct: 164 LANDLAKVRFLFGQLKEMGSVMTMSSANSLIKNCGGLGMVEELLWVWRRMKENEIEPSLY 223

Query: 176 TYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
            +NFL+NGLVN M++ES E+V +VMEN  ++PDVV YNTMIKGYC +G  +KA++  Q
Sbjct: 224 AFNFLLNGLVNSMFVESTEQVFKVMENSKIRPDVVNYNTMIKGYCKAGKTQKAMEKLQ 281


>gb|EXB62273.1| hypothetical protein L484_022161 [Morus notabilis]
          Length = 557

 Score =  221 bits (563), Expect = 2e-55
 Identities = 104/181 (57%), Positives = 137/181 (75%)
 Frame = -3

Query: 545 DLTLFCDKYLIRLPPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIE 366
           +L  FC  +LI+L P F + +L N  +   + + A RFF WAGKQK Y   LEC+V +IE
Sbjct: 4   NLDTFCKTFLIKLSPNFVSFVL-NSRELLRKPDIALRFFYWAGKQKKYNQKLECYVSLIE 62

Query: 365 ILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEP 186
           +L L  D D A+ VF+E++     MN+++ANSLI+SFG+ GMVEEL+WVW++MK+NGI+P
Sbjct: 63  LLSLCGDLDCARRVFSELEGMSFLMNASSANSLIKSFGSVGMVEELLWVWRQMKENGIDP 122

Query: 185 TLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMF 6
           +LYTYNFLMNGLVN M+IESAERV E MENG V+PD+VTYNT+ KGYC +G V+KA D F
Sbjct: 123 SLYTYNFLMNGLVNSMFIESAERVFEAMENGKVEPDIVTYNTLFKGYCKAGQVQKAFDKF 182

Query: 5   Q 3
           +
Sbjct: 183 R 183



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 42/163 (25%), Positives = 80/163 (49%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   +  +++N +    R + A  +F +  K KG   N   +  +I       + + A++
Sbjct: 297 PDEVSYGVIINGLCRNGRMDEAMGYFEFC-KGKGMPINSMFYSSLINGFGKAGNVEEAQT 355

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +F EM   G   +S   N+LI +    G  +E + ++K+M+D G + T+YTY  L++GL 
Sbjct: 356 IFEEMVDNGCPRDSYCYNALIDALAKSGNTDEALALFKRMEDEGCDQTVYTYTILIDGLF 415

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKA 18
                E A ++ ++M +  + P   ++  +  G C SG V +A
Sbjct: 416 KEHKNEEALKLWDIMIDKGITPTAASFRALSIGLCLSGKVARA 458



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 35/124 (28%), Positives = 65/124 (52%)
 Frame = -3

Query: 374 MIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNG 195
           +I  LC         +VFN+M  KG   N     ++I S+   G +EE V ++K+M+ +G
Sbjct: 235 VISGLCKRGKCMEGYAVFNDMIQKGYGANVAIYTAMIDSYSKCGSMEEAVRLFKRMESDG 294

Query: 194 IEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAI 15
           +EP   +Y  ++NGL     ++ A    E  +   +  + + Y+++I G+  +GNV +A 
Sbjct: 295 LEPDEVSYGVIINGLCRNGRMDEAMGYFEFCKGKGMPINSMFYSSLINGFGKAGNVEEAQ 354

Query: 14  DMFQ 3
            +F+
Sbjct: 355 TIFE 358



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 38/123 (30%), Positives = 57/123 (46%)
 Frame = -3

Query: 374 MIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNG 195
           +I  LC     D A   F   K KG+ +NS   +SLI  FG  G VEE   ++++M DNG
Sbjct: 305 IINGLCRNGRMDEAMGYFEFCKGKGMPINSMFYSSLINGFGKAGNVEEAQTIFEEMVDNG 364

Query: 194 IEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAI 15
                Y YN L++ L      + A  + + ME+      V TY  +I G        +A+
Sbjct: 365 CPRDSYCYNALIDALAKSGNTDEALALFKRMEDEGCDQTVYTYTILIDGLFKEHKNEEAL 424

Query: 14  DMF 6
            ++
Sbjct: 425 KLW 427



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 35/137 (25%), Positives = 61/137 (44%)
 Frame = -3

Query: 413 QKGYAHNLECFVHMIEILCLESDFDGAKSVFNEMKSKGLFMNSTAANSLIRSFGNGGMVE 234
           QKGY  N+  +  MI+        + A  +F  M+S GL  +  +   +I      G ++
Sbjct: 257 QKGYGANVAIYTAMIDSYSKCGSMEEAVRLFKRMESDGLEPDEVSYGVIINGLCRNGRMD 316

Query: 233 ELVWVWKKMKDNGIEPTLYTYNFLMNGLVNCMYIESAERVLEVMENGIVKPDVVTYNTMI 54
           E +  ++  K  G+      Y+ L+NG      +E A+ + E M +     D   YN +I
Sbjct: 317 EAMGYFEFCKGKGMPINSMFYSSLINGFGKAGNVEEAQTIFEEMVDNGCPRDSYCYNALI 376

Query: 53  KGYCNSGNVRKAIDMFQ 3
                SGN  +A+ +F+
Sbjct: 377 DALAKSGNTDEALALFK 393



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 40/168 (23%), Positives = 76/168 (45%)
 Frame = -3

Query: 506 PPTFTAHILMNPVQYPNRAETAFRFFRWAGKQKGYAHNLECFVHMIEILCLESDFDGAKS 327
           P   T + L        + + AF  FR A + +    +   ++ +++    + DFD   S
Sbjct: 157 PDIVTYNTLFKGYCKAGQVQKAFDKFR-AMEARNVQPDKVTYMTLMQACYSKEDFDSCLS 215

Query: 326 VFNEMKSKGLFMNSTAANSLIRSFGNGGMVEELVWVWKKMKDNGIEPTLYTYNFLMNGLV 147
           +++EM+ K L +   A   +I      G   E   V+  M   G    +  Y  +++   
Sbjct: 216 LYHEMEEKRLEIPPHAYTLVISGLCKRGKCMEGYAVFNDMIQKGYGANVAIYTAMIDSYS 275

Query: 146 NCMYIESAERVLEVMENGIVKPDVVTYNTMIKGYCNSGNVRKAIDMFQ 3
            C  +E A R+ + ME+  ++PD V+Y  +I G C +G + +A+  F+
Sbjct: 276 KCGSMEEAVRLFKRMESDGLEPDEVSYGVIINGLCRNGRMDEAMGYFE 323