BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00049431
         (635 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU32989.1| hypothetical protein MIMGU_mgv1a018420mg [Mimulus...   365   6e-99
ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...   332   4e-89
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...   330   2e-88
ref|XP_007036081.1| Pentatricopeptide repeat (PPR) superfamily p...   323   3e-86
ref|XP_007036080.1| Pentatricopeptide repeat superfamily protein...   323   3e-86
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   320   2e-85
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   318   1e-84
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr...   314   2e-83
ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi...   313   3e-83
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi...   312   6e-83
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...   308   1e-81
gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlise...   306   4e-81
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   305   1e-80
gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]     302   5e-80
ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Caps...   302   5e-80
ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutr...   296   5e-78
ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp....   294   2e-77
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   292   5e-77
ref|NP_177628.2| pentatricopeptide repeat-containing protein [Ar...   292   5e-77
ref|XP_007132384.1| hypothetical protein PHAVU_011G090300g [Phas...   292   7e-77

>gb|EYU32989.1| hypothetical protein MIMGU_mgv1a018420mg [Mimulus guttatus]
          Length = 488

 Score =  365 bits (937), Expect = 6e-99
 Identities = 166/211 (78%), Positives = 198/211 (93%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LD+LCKSKR EMA++L  +F+GRFRADV+SYNIIANGFCLKKQTP A+ VM+E+V+RG+E
Sbjct: 175 LDILCKSKRAEMAYKLFKIFRGRFRADVISYNIIANGFCLKKQTPRAMEVMRELVDRGLE 234

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           PTLTTYNILLKG+FR+GQ++EGWEFF++MKKRKIEIDVV+YTT++HGFG+ GEVEK+RK+
Sbjct: 235 PTLTTYNILLKGFFRSGQIKEGWEFFMEMKKRKIEIDVVSYTTLVHGFGIAGEVEKSRKV 294

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EMIGAGVLPSVATY+ALIQ+LCKKDC+ENA++VF++ML KGYVPNATTYNVVIRGLCH
Sbjct: 295 FDEMIGAGVLPSVATYNALIQILCKKDCVENALLVFDEMLKKGYVPNATTYNVVIRGLCH 354

Query: 542 AGKIDTAIEYMDKMEDDCEPTIQTFNIVINY 634
           A K+DTAIEYMDKM  DCEP IQTFN+VI Y
Sbjct: 355 AEKLDTAIEYMDKMRQDCEPVIQTFNVVIRY 385



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
 Frame = +2

Query: 248 WEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQV 427
           W    +M+ RK+     T+  +   +   G+ +KA K+F  M   G    + +++ L+ +
Sbjct: 118 WTLVSKMRSRKLGPTPKTFAIITERYVSAGKADKAVKIFLSMHEHGCQQDLHSFNTLLDI 177

Query: 428 LCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDKMED-DCEPT 604
           LCK    E A  +F+    + +  +  +YN++  G C   +   A+E M ++ D   EPT
Sbjct: 178 LCKSKRAEMAYKLFKIFRGR-FRADVISYNIIANGFCLKKQTPRAMEVMRELVDRGLEPT 236

Query: 605 IQTFNIVI 628
           + T+NI++
Sbjct: 237 LTTYNILL 244


>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565356286|ref|XP_006344999.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565356288|ref|XP_006345000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score =  332 bits (852), Expect = 4e-89
 Identities = 151/212 (71%), Positives = 185/212 (87%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKR EMA +L  +F+ RF+AD +SYN +ANGFCL K+TP A  ++KEMVERG+ 
Sbjct: 173 LDVLCKSKRAEMALKLFKMFRSRFKADTISYNTLANGFCLVKRTPKAQEILKEMVERGLN 232

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           PT+TTYNI+L G+FRAGQ++E WEFFLQMKKRK +IDVVTYTT++HGFGV GEVEKA+KL
Sbjct: 233 PTITTYNIMLNGFFRAGQIKEAWEFFLQMKKRKCDIDVVTYTTIVHGFGVAGEVEKAQKL 292

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EM+GAG+LPSVATY+ALIQV+CKKD +ENAI++F +ML KGY+PNATTYN +IRGLCH
Sbjct: 293 FNEMVGAGILPSVATYNALIQVMCKKDSVENAILIFNEMLRKGYLPNATTYNAIIRGLCH 352

Query: 542 AGKIDTAIEYMDKM-EDDCEPTIQTFNIVINY 634
            GK+D A+EYMDKM ED CEP +QT+N+VI Y
Sbjct: 353 VGKMDNAMEYMDKMNEDGCEPNVQTYNVVIRY 384


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score =  330 bits (846), Expect = 2e-88
 Identities = 151/212 (71%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKR EMA +L  +F+ RF+AD +SYN +ANGFCL K+TP A  ++KEMVERG+ 
Sbjct: 179 LDVLCKSKRAEMALKLFKMFRSRFKADTISYNTLANGFCLVKRTPKAQEILKEMVERGLN 238

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           PT+TTYNI+L G+FRAGQ++E WEFFLQMKKRK +IDVVTYTT++HGFGV GEVEKA+KL
Sbjct: 239 PTITTYNIMLNGFFRAGQIKEAWEFFLQMKKRKCDIDVVTYTTLVHGFGVAGEVEKAQKL 298

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EM+GAG+LPS+ATY+ALIQV+CKKD  ENAI+VF +ML KGY+PNATTYN +IRGLCH
Sbjct: 299 FNEMVGAGILPSIATYNALIQVMCKKDSTENAILVFNEMLRKGYLPNATTYNAIIRGLCH 358

Query: 542 AGKIDTAIEYMDKM-EDDCEPTIQTFNIVINY 634
            GK+D A+EYMDKM ED CEP +QT+N+VI Y
Sbjct: 359 VGKMDNAMEYMDKMNEDGCEPNVQTYNVVIRY 390


>ref|XP_007036081.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao] gi|590662981|ref|XP_007036082.1|
           Pentatricopeptide repeat (PPR) superfamily protein
           isoform 2 [Theobroma cacao] gi|508773326|gb|EOY20582.1|
           Pentatricopeptide repeat (PPR) superfamily protein
           isoform 2 [Theobroma cacao] gi|508773327|gb|EOY20583.1|
           Pentatricopeptide repeat (PPR) superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 413

 Score =  323 bits (828), Expect = 3e-86
 Identities = 152/212 (71%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCK+KRVE A     V +G+F+ADV+SYNIIANG+CL K+T +AL  +KEMVE+G+ 
Sbjct: 178 LDVLCKAKRVEKACNFFKVLRGKFKADVISYNIIANGWCLIKRTNMALETLKEMVEKGLT 237

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYNI+LKGYFRAGQ++EGW+FFL+MKKRK EIDVVTYTTV+HG GV GE+++ARK+
Sbjct: 238 PNLTTYNIMLKGYFRAGQIEEGWKFFLEMKKRKCEIDVVTYTTVVHGLGVAGEIKRARKV 297

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EM+  GVLPSVATY+ALIQVLCKKDC+ENAI+VFE+ML KGYVPN+TTYNVVIRGLCH
Sbjct: 298 FDEMVREGVLPSVATYNALIQVLCKKDCVENAILVFEEMLRKGYVPNSTTYNVVIRGLCH 357

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
             ++D AIE+MDKM DD C P +QT+NIVI Y
Sbjct: 358 KEQMDRAIEFMDKMRDDECGPNVQTYNIVIRY 389



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 38/145 (26%), Positives = 69/145 (47%)
 Frame = +2

Query: 62  KGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQ 241
           K +   DVV+Y  + +G  +  +   A  V  EMV  G+ P++ TYN L++   +   V+
Sbjct: 268 KRKCEIDVVTYTTVVHGLGVAGEIKRARKVFDEMVREGVLPSVATYNALIQVLCKKDCVE 327

Query: 242 EGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALI 421
                F +M ++    +  TY  VI G     ++++A +   +M      P+V TY+ +I
Sbjct: 328 NAILVFEEMLRKGYVPNSTTYNVVIRGLCHKEQMDRAIEFMDKMRDDECGPNVQTYNIVI 387

Query: 422 QVLCKKDCIENAIVVFEDMLAKGYV 496
           +  C    IE  + +F+ M    +V
Sbjct: 388 RYFCDAGEIEKGLELFQKMSCGDFV 412


>ref|XP_007036080.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|590662984|ref|XP_007036083.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508773325|gb|EOY20581.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508773328|gb|EOY20584.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao]
          Length = 491

 Score =  323 bits (828), Expect = 3e-86
 Identities = 152/212 (71%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCK+KRVE A     V +G+F+ADV+SYNIIANG+CL K+T +AL  +KEMVE+G+ 
Sbjct: 178 LDVLCKAKRVEKACNFFKVLRGKFKADVISYNIIANGWCLIKRTNMALETLKEMVEKGLT 237

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYNI+LKGYFRAGQ++EGW+FFL+MKKRK EIDVVTYTTV+HG GV GE+++ARK+
Sbjct: 238 PNLTTYNIMLKGYFRAGQIEEGWKFFLEMKKRKCEIDVVTYTTVVHGLGVAGEIKRARKV 297

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EM+  GVLPSVATY+ALIQVLCKKDC+ENAI+VFE+ML KGYVPN+TTYNVVIRGLCH
Sbjct: 298 FDEMVREGVLPSVATYNALIQVLCKKDCVENAILVFEEMLRKGYVPNSTTYNVVIRGLCH 357

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
             ++D AIE+MDKM DD C P +QT+NIVI Y
Sbjct: 358 KEQMDRAIEFMDKMRDDECGPNVQTYNIVIRY 389


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  320 bits (821), Expect = 2e-85
 Identities = 148/212 (69%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCK+KRVE A+ L  VF+GRFRAD VSYN+I NG+CL K+TP AL V++EMVERGIE
Sbjct: 176 LDVLCKAKRVEKAYNLFKVFRGRFRADCVSYNVIVNGWCLIKRTPKALEVLREMVERGIE 235

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P+L TYNI+LKGY RAGQV+E WEFF +MK+RK EIDVVTYTT++HGFGV GE++K RK+
Sbjct: 236 PSLVTYNIMLKGYLRAGQVKEAWEFFREMKRRKCEIDVVTYTTLVHGFGVLGEIKKVRKI 295

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F  M+  GVLPSVATY+ALIQVLCKKD +ENA+VVFE+M++KGYVPN TTYNV++RGLCH
Sbjct: 296 FDGMVEEGVLPSVATYNALIQVLCKKDSVENAVVVFEEMVSKGYVPNVTTYNVLVRGLCH 355

Query: 542 AGKIDTAIEYMDKM-EDDCEPTIQTFNIVINY 634
           AG +D+ +E M++M +DDCEP +QT+N+VI Y
Sbjct: 356 AGNMDSGMELMERMKDDDCEPNVQTYNVVIRY 387



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V +YN +    C K     A+ V +EMV +G  P +TTYN+L++G   AG +  G E   
Sbjct: 308 VATYNALIQVLCKKDSVENAVVVFEEMVSKGYVPNVTTYNVLVRGLCHAGNMDSGMELME 367

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +MK    E +V TY  VI  F   G+++KA  +F +M     LP++ TY+ LI  +  + 
Sbjct: 368 RMKDDDCEPNVQTYNVVIRYFCDDGQIDKALDVFEKMGKGECLPNLDTYNVLISAMFVRK 427

Query: 443 CIENAIV---VFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYM 574
             E+ +V   +  +M+ +G++P   T+N V+ GL   G    A E +
Sbjct: 428 KPEDLLVAGKLLIEMVDRGFLPRKYTFNKVLDGLLLTGNQGFAKEIL 474


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  318 bits (814), Expect = 1e-84
 Identities = 147/213 (69%), Positives = 188/213 (88%), Gaps = 2/213 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHR-LLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGI 178
           LD+LCKSKRVEMA+  L  V +G+F+ADVVSYNIIANG+CL K+TP AL V+KEMVERG+
Sbjct: 189 LDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGL 248

Query: 179 EPTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARK 358
            PT+TTYNILLKGYFRAGQ++E WEFFLQMK+R++EIDVVTYTT++HGFGV GE+++ARK
Sbjct: 249 TPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARK 308

Query: 359 LFGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLC 538
           +F EM+G G+LPS ATY+A+IQVLCKKD +ENA+++FE+M+ KGYVPN TTYNVVIRGL 
Sbjct: 309 VFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLF 368

Query: 539 HAGKIDTAIEYMDKME-DDCEPTIQTFNIVINY 634
           HAG +D A+E++++M+ D CEP +QT+N+ I Y
Sbjct: 369 HAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRY 401



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
 Frame = +2

Query: 89  SYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFLQM 268
           +YN +    C K     A+ + +EMV++G  P LTTYN++++G F AG + +  EF  +M
Sbjct: 324 TYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERM 383

Query: 269 KKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKDCI 448
           K    E +V TY   I  F   G+VEK   +F E +G G LP++ TY+ LI  +  +   
Sbjct: 384 KTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMF-EKMGQGSLPNLDTYNVLISAMFVRKKS 442

Query: 449 ENAIVVFE---DMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDKMEDDC 595
           E+ +V  +   +M+ +G++P   T+N V+ GL   G    A E + +++  C
Sbjct: 443 EDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEIL-RLQSKC 493



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +2

Query: 248 WEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQV 427
           W    +M+ R+I     T+  +   F   G+ ++A K+F  M   G    + +++ ++ +
Sbjct: 132 WALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDI 191

Query: 428 LCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDKM-EDDCEPT 604
           LCK   +E A      +L   +  +  +YN++  G C   +   A+E + +M E    PT
Sbjct: 192 LCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPT 251

Query: 605 IQTFNIVI 628
           I T+NI++
Sbjct: 252 ITTYNILL 259


>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
           gi|557541992|gb|ESR52970.1| hypothetical protein
           CICLE_v10019863mg [Citrus clementina]
          Length = 493

 Score =  314 bits (804), Expect = 2e-83
 Identities = 141/212 (66%), Positives = 185/212 (87%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LD+LCK K+VE A+ L  VF+G+F+ADV+SYN+IANG+CL K+T  AL V+KEMV+RG+ 
Sbjct: 180 LDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLN 239

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYNI+LKGYFRAGQ++E W FFL+MKKRK EIDVVTYTT++HGFG+ GE+++AR +
Sbjct: 240 PNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGIVGEIKRARNV 299

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F  M+  GVLPSVATY+A+IQVLCKKD +ENAI+VFE+M+ KGY+PN+TTYNVVIRGLCH
Sbjct: 300 FDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVRKGYMPNSTTYNVVIRGLCH 359

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
           AG+++ A+E++ +M+DD CEP +QT+NI+I Y
Sbjct: 360 AGEMERALEFVGRMKDDECEPNVQTYNILIRY 391



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
 Frame = +2

Query: 17  KSKRVEMAHRL-LGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLT 193
           ++ ++E A R  L + K +   DVV+Y  I +GF +  +   A NV   MV  G+ P++ 
Sbjct: 254 RAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGIVGEIKRARNVFDGMVNGGVLPSVA 313

Query: 194 TYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEM 373
           TYN +++   +   V+     F +M ++    +  TY  VI G    GE+E+A +  G M
Sbjct: 314 TYNAMIQVLCKKDSVENAILVFEEMVRKGYMPNSTTYNVVIRGLCHAGEMERALEFVGRM 373

Query: 374 IGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCHAGKI 553
                 P+V TY+ LI+  C    IE  + +FE M +   +PN  TYN++I  +    K 
Sbjct: 374 KDDECEPNVQTYNILIRYFCDAGEIERGLELFEKMGSGVCLPNLDTYNILISSMFVRKKS 433

Query: 554 DTAIE----YMDKMEDDCEPTIQTFNIVIN 631
           D  +      ++ ++    P   TFN V+N
Sbjct: 434 DDLLVAGKLLIEMVDRGFMPRKFTFNRVLN 463


>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568845657|ref|XP_006476684.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 493

 Score =  313 bits (802), Expect = 3e-83
 Identities = 141/212 (66%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LD+LCK K+VE A+ L  VF+G+F+ADV+SYN+IANG+CL K+T  AL V+KEMV+RG+ 
Sbjct: 180 LDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLN 239

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYNI+LKGYFRAGQ++E W FFL+MKKRK EIDVVTYTT++HGFGV GE+++AR +
Sbjct: 240 PNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNV 299

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F  M+  GVLPSVATY+A+IQVLCKKD +ENAI+VFE+M+ KGY+PN+TTYNVVIRGLCH
Sbjct: 300 FDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCH 359

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
            G+++ A+E++ +M+DD CEP +QT+NI+I Y
Sbjct: 360 TGEMERALEFVGRMKDDECEPNVQTYNILIRY 391


>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cicer arietinum]
          Length = 498

 Score =  312 bits (799), Expect = 6e-83
 Identities = 142/212 (66%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCK+KRVEMAH L   FKGRF+ D VSYNI+ANG+CL K+TP+AL VMKEMVERGI 
Sbjct: 185 LDVLCKTKRVEMAHNLFKTFKGRFKCDSVSYNIMANGWCLMKRTPMALQVMKEMVERGIT 244

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           PT+ TYN LLKGYFR+ Q+ E W+FFL+MKKRK EIDVVTYTT++HGFGV GEV++++++
Sbjct: 245 PTMVTYNTLLKGYFRSHQLNEAWDFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRV 304

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F  M+  G++PSVATY+ALIQVLCKKD ++NA++VFE+M+ KGYVPN TTYNVVIRGLCH
Sbjct: 305 FDAMVKEGLIPSVATYNALIQVLCKKDNVQNALLVFEEMVGKGYVPNLTTYNVVIRGLCH 364

Query: 542 AGKIDTAIEYMDKMED-DCEPTIQTFNIVINY 634
           +G+++ A+E+M++ME+  C P++QT+N+VI Y
Sbjct: 365 SGEMEKALEFMERMEEHGCRPSVQTYNVVIRY 396



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V +YN +    C K     AL V +EMV +G  P LTTYN++++G   +G++++  EF  
Sbjct: 317 VATYNALIQVLCKKDNVQNALLVFEEMVGKGYVPNLTTYNVVIRGLCHSGEMEKALEFME 376

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +M++      V TY  VI  F   GE+EK   LF +M     LP++ TY+ LI  +  + 
Sbjct: 377 RMEEHGCRPSVQTYNVVIRYFCDDGELEKGFGLFEKMGNGTCLPNLDTYNILISAMFVRK 436

Query: 443 CIENAIV---VFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDKMEDDC 595
             E+ +V   +  +M+ +G++P   T+N V+ GL   G  D A E + +M+  C
Sbjct: 437 KSEDLVVAGKLLIEMVGRGFLPRKFTFNRVLNGLVLTGNRDFANEIL-RMQSRC 489



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGR-FRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGI 178
           + VLCK   V+ A  +     G+ +  ++ +YN++  G C   +   AL  M+ M E G 
Sbjct: 324 IQVLCKKDNVQNALLVFEEMVGKGYVPNLTTYNVVIRGLCHSGEMEKALEFMERMEEHGC 383

Query: 179 EPTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEK--- 349
            P++ TYN++++ +   G++++G+  F +M       ++ TY  +I    V  + E    
Sbjct: 384 RPSVQTYNVVIRYFCDDGELEKGFGLFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVV 443

Query: 350 ARKLFGEMIGAGVLPSVATYSALIQVL 430
           A KL  EM+G G LP   T++ ++  L
Sbjct: 444 AGKLLIEMVGRGFLPRKFTFNRVLNGL 470


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322291|gb|EEF05687.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 491

 Score =  308 bits (788), Expect = 1e-81
 Identities = 142/212 (66%), Positives = 180/212 (84%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVEMA+ L  VFKG+FRAD VSYN++ NG+CL K+T  AL ++KEMV+RG+ 
Sbjct: 178 LDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLT 237

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LT+YN +LKGYFRAGQ+ E W+FFL+MKKR  EIDV+TYTTVIHGFGV GE+++ARK+
Sbjct: 238 PNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKV 297

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F  M+  GVLPSVATY+A IQVLCKKD ++NAIV+FE+M+ KGYVPN+ TYN+VIRGLCH
Sbjct: 298 FDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCH 357

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
            G+++ A+E+M +M DD CEP +QT+N+VI Y
Sbjct: 358 RGEMERAMEFMGRMRDDGCEPNVQTYNLVIRY 389



 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V +YN      C K     A+ + +EMV +G  P   TYN++++G    G+++   EF  
Sbjct: 310 VATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMG 369

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +M+    E +V TY  VI  F   GE++KA  LF +M     LP++ TY+ LI  +  + 
Sbjct: 370 RMRDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRK 429

Query: 443 CIENAIV---VFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDKMEDDC 595
             ++ +V   +  +M+ +G+VP   T+N V+ GL   G    A E + +++  C
Sbjct: 430 KSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEIL-RLQSRC 482


>gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlisea aurea]
          Length = 451

 Score =  306 bits (783), Expect = 4e-81
 Identities = 145/213 (68%), Positives = 178/213 (83%), Gaps = 2/213 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKR E AH+L  + +GRFRAD ++YNIIA GFCLKKQT  A+ VMKEMVERG+ 
Sbjct: 137 LDVLCKSKRAEKAHKLFTILRGRFRADAITYNIIAYGFCLKKQTSRAVEVMKEMVERGLI 196

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           PTLTTYNILLKGYF AGQ+++G EFF Q+KKR +E+D V++TTV+HG GV GE+EKARK+
Sbjct: 197 PTLTTYNILLKGYFGAGQIKQGLEFFSQLKKRNVEMDAVSFTTVVHGLGVAGEIEKARKV 256

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EM  AGVLP+VA+Y+A+IQ+LCKKD +ENA+ VF++M  KG  PNATTYN+VIRGLCH
Sbjct: 257 FREMSEAGVLPTVASYNAMIQILCKKDSVENAMKVFDEMQQKGTKPNATTYNLVIRGLCH 316

Query: 542 AGKIDTAIEYMDKMEDD--CEPTIQTFNIVINY 634
            GK D AIEYMD+M+++  C PT QTFNI+I Y
Sbjct: 317 VGKFDMAIEYMDRMKENGCCTPTFQTFNIIIRY 349



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 38/147 (25%), Positives = 79/147 (53%)
 Frame = +2

Query: 146 NVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGF 325
           N+++ M  R ++P+  T++I+++ Y  AG+  +    FL M +     D+ ++  ++   
Sbjct: 81  NLIRRMRSRKLKPSPKTFSIVIERYASAGRADKAVNVFLTMHRHGCPQDLSSFNAMLDVL 140

Query: 326 GVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNA 505
             +   EKA KLF  + G     ++ TY+ +    C K     A+ V ++M+ +G +P  
Sbjct: 141 CKSKRAEKAHKLFTILRGRFRADAI-TYNIIAYGFCLKKQTSRAVEVMKEMVERGLIPTL 199

Query: 506 TTYNVVIRGLCHAGKIDTAIEYMDKME 586
           TTYN++++G   AG+I   +E+  +++
Sbjct: 200 TTYNILLKGYFGAGQIKQGLEFFSQLK 226


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  305 bits (780), Expect = 1e-80
 Identities = 141/212 (66%), Positives = 178/212 (83%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVEMA+ L    KG+F+AD VSYNII NG+CL K+TP AL ++KEMVERG+ 
Sbjct: 169 LDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLT 228

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYNI+L GYFRAGQ  E W FFL+MKKRK +IDVVTYT+VIHG GV GE+++AR +
Sbjct: 229 PNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNV 288

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F +M+  GVLPSVAT++ALIQ+LCKKD +ENAI++FE+M+ +GYVPN+ TYN+VIRGLCH
Sbjct: 289 FNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCH 348

Query: 542 AGKIDTAIEYMDKME-DDCEPTIQTFNIVINY 634
            G++  A+E M++ME DDCEP +QT+NI+I Y
Sbjct: 349 VGEMQRAMELMERMEDDDCEPNVQTYNILIRY 380



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V ++N +    C K     A+ + +EMV+RG  P   TYN++++G    G++Q   E   
Sbjct: 301 VATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELME 360

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +M+    E +V TY  +I  F   GE+EK   LF +M     LP++ TY+ LI  +  + 
Sbjct: 361 RMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRK 420

Query: 443 CIENAIV---VFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYM 574
             +N +V   +  +M+ +G++P   T+N V+ GL   G  D A E +
Sbjct: 421 NSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEIL 467



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 47/152 (30%), Positives = 79/152 (51%)
 Frame = +2

Query: 80  DVVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFF 259
           DVV+Y  + +G  +  +   A NV  +MV+ G+ P++ T+N L++   +   V+     F
Sbjct: 265 DVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIF 324

Query: 260 LQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKK 439
            +M KR    + +TY  VI G    GE+++A +L   M      P+V TY+ LI+  C  
Sbjct: 325 EEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDA 384

Query: 440 DCIENAIVVFEDMLAKGYVPNATTYNVVIRGL 535
             IE  + +F+ M     +PN  TYN++I  +
Sbjct: 385 GEIEKGLDLFQKMGNGDCLPNLDTYNILINSM 416


>gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]
          Length = 521

 Score =  302 bits (774), Expect = 5e-80
 Identities = 137/212 (64%), Positives = 180/212 (84%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKS RVEMAH     ++  FR D VSYN+IANG+CL K+TP AL V+++MV+RG  
Sbjct: 169 LDVLCKSGRVEMAHNFFRAYRRNFRVDTVSYNVIANGWCLIKKTPKALEVLEDMVKRGFS 228

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P+L TYNI+LKGYFRAGQV+E WEFF +MK+RK+EIDVVTYTT++HGFGV GE++KAR++
Sbjct: 229 PSLITYNIMLKGYFRAGQVKEAWEFFGEMKRRKVEIDVVTYTTLVHGFGVVGEIKKARRI 288

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EM+G GV+P+VATY+ALIQVLCKKD +ENA+VVFE+M+ KG VPN TTY V++RGLCH
Sbjct: 289 FDEMVGEGVVPTVATYNALIQVLCKKDSVENAVVVFEEMVGKGCVPNVTTYTVLVRGLCH 348

Query: 542 AGKIDTAIEYMDKME-DDCEPTIQTFNIVINY 634
           AG+++ ++E++++M+ D CEP +Q +NIVI Y
Sbjct: 349 AGQMERSMEFVERMKGDGCEPNVQIYNIVIRY 380


>ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Capsella rubella]
           gi|482570383|gb|EOA34571.1| hypothetical protein
           CARUB_v10022126mg [Capsella rubella]
          Length = 451

 Score =  302 bits (774), Expect = 5e-80
 Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVE A+ L    +GRF AD V+YN+I NG+CL K+TP AL V+KEMVERGI+
Sbjct: 166 LDVLCKSKRVEKAYELFRALRGRFGADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGID 225

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYN +LKG+FRAGQ++  WEFFL+MKKR  EIDVVTYTTV+HGFGV GE+++AR +
Sbjct: 226 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRARNV 285

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EMI  GVLPSVATY+A+IQVLCKKDC+ENA+V+FEDM+ KGY PN TTYNV+IRGL H
Sbjct: 286 FDEMIREGVLPSVATYNAMIQVLCKKDCVENAVVMFEDMVRKGYEPNVTTYNVLIRGLFH 345

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
           AGK     E M +ME++ C+P  QT+N++I Y
Sbjct: 346 AGKFSRGEELMQRMENEGCKPNFQTYNMMIRY 377



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 43/135 (31%), Positives = 71/135 (52%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V +YN +    C K     A+ + ++MV +G EP +TTYN+L++G F AG+   G E   
Sbjct: 298 VATYNAMIQVLCKKDCVENAVVMFEDMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQ 357

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +M+    + +  TY  +I  +    E++KA  LFG+M     LP++ TY+ LI  +  + 
Sbjct: 358 RMENEGCKPNFQTYNMMIRYYSECSEIDKALCLFGKMGSGDCLPNLDTYNILISGMFVRK 417

Query: 443 CIENAIVVFEDMLAK 487
             E+ +V      AK
Sbjct: 418 RSEDMVVAGNQAFAK 432



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
 Frame = +2

Query: 248 WEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQV 427
           W    +M+  +I     T+  V   F  +G+ +KA KLF  M   G    +A+++ ++ V
Sbjct: 109 WSLLHRMRSLRIGPSPKTFAIVAERFASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 168

Query: 428 LCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDKM-EDDCEPT 604
           LCK   +E A  +F  +  + +  +  TYNV++ G C   +   A+E + +M E   +P 
Sbjct: 169 LCKSKRVEKAYELFRALRGR-FGADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGIDPN 227

Query: 605 IQTFNIVI 628
           + T+N ++
Sbjct: 228 LTTYNTML 235


>ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutrema salsugineum]
           gi|557086807|gb|ESQ27659.1| hypothetical protein
           EUTSA_v10018527mg [Eutrema salsugineum]
          Length = 454

 Score =  296 bits (757), Expect = 5e-78
 Identities = 141/212 (66%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVE AH L    +GRF  D V+YN+I NG+CL K+TP AL V+KEMVERGI 
Sbjct: 169 LDVLCKSKRVEKAHELFRALRGRFSVDTVTYNVIVNGWCLIKRTPKALEVLKEMVERGIN 228

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYN +LKG+FRAGQ+++ WEFFL+MKKR  EIDVVTYTTV+HGFGV GE+++AR +
Sbjct: 229 PNLTTYNTMLKGFFRAGQIKQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRARNV 288

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EMI  GVLPSVAT++ALIQVLCKKD +ENAIV+FE+ML KGY PN TTYNV+IRGL H
Sbjct: 289 FDEMIREGVLPSVATHNALIQVLCKKDSVENAIVMFEEMLRKGYEPNVTTYNVLIRGLFH 348

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
           AG      E M +M+++ CEP  QT+N++I Y
Sbjct: 349 AGDFSRGEELMKRMKNEGCEPNFQTYNMMIRY 380



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/135 (33%), Positives = 69/135 (51%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V ++N +    C K     A+ + +EM+ +G EP +TTYN+L++G F AG    G E   
Sbjct: 301 VATHNALIQVLCKKDSVENAIVMFEEMLRKGYEPNVTTYNVLIRGLFHAGDFSRGEELMK 360

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +MK    E +  TY  +I  +    EVEKA  LF +M     LP++ TY+ LI  +  + 
Sbjct: 361 RMKNEGCEPNFQTYNMMIRYYSECSEVEKALALFEKMGSGDCLPNLDTYNILISGMFVRK 420

Query: 443 CIENAIVVFEDMLAK 487
             E+ +V      AK
Sbjct: 421 RSEDMVVAGNQAFAK 435


>ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333405|gb|EFH63823.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  294 bits (752), Expect = 2e-77
 Identities = 138/212 (65%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVE A+ L    +GRF AD V+YN+I NG+CL K+TP AL V+KEMV+RGI 
Sbjct: 166 LDVLCKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGIN 225

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYN +L+G+FRAGQ+++ WEFFL+MKKR  EIDVVTYTTV+HGFGV GE+++ R +
Sbjct: 226 PNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNV 285

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EMI  GVLPSVATY+A IQVLCKKD +ENA+V+FE+M+ KGY PN TTYNV+IRGL H
Sbjct: 286 FDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFH 345

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
           AGK     E M +ME++ CEP  QT+N++I Y
Sbjct: 346 AGKFSRGEELMQRMENEGCEPNFQTYNMMIRY 377



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 46/135 (34%), Positives = 69/135 (51%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V +YN      C K     A+ + +EMV +G EP +TTYN+L++G F AG+   G E   
Sbjct: 298 VATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQ 357

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +M+    E +  TY  +I  +    EVEKA  LF +M     LP++ TY+ LI  +  + 
Sbjct: 358 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMFVRK 417

Query: 443 CIENAIVVFEDMLAK 487
             E+ +V      AK
Sbjct: 418 RSEDMVVAGNQAFAK 432



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
 Frame = +2

Query: 248 WEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQV 427
           W    +M+  +I     T+  V   +  +G+ +KA KLF  M   G    +A+++ ++ V
Sbjct: 109 WSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 168

Query: 428 LCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDKMED-DCEPT 604
           LCK   +E A  +F  +  + +  +  TYNV++ G C   +   A+E + +M D    P 
Sbjct: 169 LCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPN 227

Query: 605 IQTFNIVI 628
           + T+N ++
Sbjct: 228 LTTYNTML 235


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  292 bits (748), Expect = 5e-77
 Identities = 138/212 (65%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVE A+ L    +GRF  D V+YN+I NG+CL K+TP AL V+KEMVERGI 
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYN +LKG+FRAGQ++  WEFFL+MKKR  EIDVVTYTTV+HGFGV GE+++AR +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EMI  GVLPSVATY+A+IQVLCKKD +ENA+V+FE+M+ +GY PN TTYNV+IRGL H
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
           AG+     E M +ME++ CEP  QT+N++I Y
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379



 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V +YN +    C K     A+ + +EMV RG EP +TTYN+L++G F AG+   G E   
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +M+    E +  TY  +I  +    EVEKA  LF +M     LP++ TY+ LI  +  + 
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419

Query: 443 CIENAIVVFE---DMLAKGYVPNATTYNVVIRGLCHAG 547
             E+ +V  +   +M+ +G++P   T+N V+ GL   G
Sbjct: 420 RSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTG 457



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 35/163 (21%)
 Frame = +2

Query: 248 WEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQV 427
           W    +M+  +I     T+  V   +   G+ +KA KLF  M   G    +A+++ ++ V
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170

Query: 428 LCKKDCIE----------------------------------NAIVVFEDMLAKGYVPNA 505
           LCK   +E                                   A+ V ++M+ +G  PN 
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230

Query: 506 TTYNVVIRGLCHAGKIDTAIEYMDKMED-DCEPTIQTFNIVIN 631
           TTYN +++G   AG+I  A E+  +M+  DCE  + T+  V++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273


>ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis
           thaliana] gi|332197524|gb|AEE35645.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 453

 Score =  292 bits (748), Expect = 5e-77
 Identities = 138/212 (65%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVE A+ L    +GRF  D V+YN+I NG+CL K+TP AL V+KEMVERGI 
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           P LTTYN +LKG+FRAGQ++  WEFFL+MKKR  EIDVVTYTTV+HGFGV GE+++AR +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGYVPNATTYNVVIRGLCH 541
           F EMI  GVLPSVATY+A+IQVLCKKD +ENA+V+FE+M+ +GY PN TTYNV+IRGL H
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347

Query: 542 AGKIDTAIEYMDKMEDD-CEPTIQTFNIVINY 634
           AG+     E M +ME++ CEP  QT+N++I Y
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 47/135 (34%), Positives = 70/135 (51%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGIEPTLTTYNILLKGYFRAGQVQEGWEFFL 262
           V +YN +    C K     A+ + +EMV RG EP +TTYN+L++G F AG+   G E   
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359

Query: 263 QMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKKD 442
           +M+    E +  TY  +I  +    EVEKA  LF +M     LP++ TY+ LI  +  + 
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419

Query: 443 CIENAIVVFEDMLAK 487
             E+ +V      AK
Sbjct: 420 RSEDMVVAGNQAFAK 434



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 35/163 (21%)
 Frame = +2

Query: 248 WEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQV 427
           W    +M+  +I     T+  V   +   G+ +KA KLF  M   G    +A+++ ++ V
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170

Query: 428 LCKKDCIE----------------------------------NAIVVFEDMLAKGYVPNA 505
           LCK   +E                                   A+ V ++M+ +G  PN 
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230

Query: 506 TTYNVVIRGLCHAGKIDTAIEYMDKMED-DCEPTIQTFNIVIN 631
           TTYN +++G   AG+I  A E+  +M+  DCE  + T+  V++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273


>ref|XP_007132384.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
           gi|561005384|gb|ESW04378.1| hypothetical protein
           PHAVU_011G090300g [Phaseolus vulgaris]
          Length = 491

 Score =  292 bits (747), Expect = 7e-77
 Identities = 142/213 (66%), Positives = 174/213 (81%), Gaps = 2/213 (0%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLGVFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERGIE 181
           LDVLCKSKRVEMAH LL  F+ RFR D VSYNIIANG+CL K+TP+AL V+KEMV+RGI 
Sbjct: 177 LDVLCKSKRVEMAHTLLKTFRSRFRLDSVSYNIIANGYCLIKRTPMALQVLKEMVQRGIN 236

Query: 182 PTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKL 361
           PT+ TYN LLKGYFR+ Q++E WEF+L+MKKRK EIDVVTYTTVIHGFGV GEV+K+R++
Sbjct: 237 PTMITYNTLLKGYFRSSQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGEVKKSRRV 296

Query: 362 FGEMIGAGVLPSVATYSALIQVLCKKDCIENAIVVFEDMLAKGY-VPNATTYNVVIRGLC 538
           F EM+  GV PSVAT +ALIQVLCKKD +E+A+VVFE+M+ KG  VPN  TYNVVIRG C
Sbjct: 297 FDEMVKEGVAPSVATCNALIQVLCKKDSVESAVVVFEEMVRKGLCVPNLVTYNVVIRGFC 356

Query: 539 HAGKIDTAIEYMDKM-EDDCEPTIQTFNIVINY 634
           H G ++ A+ +M +M E     ++QT+N+VI Y
Sbjct: 357 HVGDMERALGFMGRMGEHGLRASVQTYNVVIRY 389



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
 Frame = +2

Query: 83  VVSYNIIANGFCLKKQTPLALNVMKEMVERGI-EPTLTTYNILLKGYFRAGQVQEGWEFF 259
           V + N +    C K     A+ V +EMV +G+  P L TYN++++G+   G ++    F 
Sbjct: 309 VATCNALIQVLCKKDSVESAVVVFEEMVRKGLCVPNLVTYNVVIRGFCHVGDMERALGFM 368

Query: 260 LQMKKRKIEIDVVTYTTVIHGFGVTGEVEKARKLFGEMIGAGVLPSVATYSALIQVLCKK 439
            +M +  +   V TY  VI  F   GE+EK  ++FG+M     LP++ TY+ +I  +  +
Sbjct: 369 GRMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEMFGKMKDEPCLPNLDTYNVVISAMFLR 428

Query: 440 DCIENAIV---VFEDMLAKGYVPNATTYNVVIRGLCHAGKIDTAIEYMDK 580
              E+ +V   +  +M+ +G++P   T+N V+ GL   G  D A E + K
Sbjct: 429 KKSEDLVVAGKLLMEMVDRGFLPRKFTFNRVLNGLAITGNQDFAKEILRK 478



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
 Frame = +2

Query: 2   LDVLCKSKRVEMAHRLLG--VFKGRFRADVVSYNIIANGFCLKKQTPLALNVMKEMVERG 175
           + VLCK   VE A  +    V KG    ++V+YN++  GFC       AL  M  M E G
Sbjct: 316 IQVLCKKDSVESAVVVFEEMVRKGLCVPNLVTYNVVIRGFCHVGDMERALGFMGRMGEHG 375

Query: 176 IEPTLTTYNILLKGYFRAGQVQEGWEFFLQMKKRKIEIDVVTYTTVIHGFGVTGEVEK-- 349
           +  ++ TYN++++ +  AG++++G E F +MK      ++ TY  VI    +  + E   
Sbjct: 376 LRASVQTYNVVIRYFCDAGEIEKGLEMFGKMKDEPCLPNLDTYNVVISAMFLRKKSEDLV 435

Query: 350 -ARKLFGEMIGAGVLPSVATYSALIQVL 430
            A KL  EM+  G LP   T++ ++  L
Sbjct: 436 VAGKLLMEMVDRGFLPRKFTFNRVLNGL 463