BLASTX nr result

ID: Mentha25_contig00046664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00046664
         (313 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42058.1| hypothetical protein MIMGU_mgv1a006124mg [Mimulus...    91   2e-16
ref|XP_006362332.1| PREDICTED: RING finger and transmembrane dom...    64   2e-08
ref|XP_004249023.1| PREDICTED: RING finger and transmembrane dom...    64   2e-08

>gb|EYU42058.1| hypothetical protein MIMGU_mgv1a006124mg [Mimulus guttatus]
          Length = 456

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 54/107 (50%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
 Frame = +3

Query: 9   VHISASTILRSPLSTLLEYTGILRTRXXXXXXXXXXXXGAQVGFRSD--LXXXXXXXXXX 182
           +HISAS ILRSPLSTLLEYTG+LRTR            GA +G+R               
Sbjct: 1   MHISASNILRSPLSTLLEYTGVLRTRSNHSESDILLNSGANLGYRDHHLNDSAPSPVANS 60

Query: 183 XXXXGEVSIRIIGSAEHDHDRVGTALHSGPSVG----QTESFSRPVS 311
               GEVSIRIIGS EH++DRV T LH  P+V     Q+ES+SRP+S
Sbjct: 61  SVSAGEVSIRIIGSGEHENDRVATVLHPVPTVEQLSVQSESYSRPIS 107


>ref|XP_006362332.1| PREDICTED: RING finger and transmembrane domain-containing protein
           2-like [Solanum tuberosum]
          Length = 477

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 48/111 (43%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
 Frame = +3

Query: 3   NGVHISASTILRSPLSTLLEYTGILRTRXXXXXXXXXXXXGAQVGFRSDLXXXXXXXXXX 182
           +GV +SA+ + RSPLSTLLEY+GILRTR             +Q   R D           
Sbjct: 30  HGVQLSAANLFRSPLSTLLEYSGILRTRSSHTESDSLI--NSQFQPRVD---DAGTSPAS 84

Query: 183 XXXXGEVSIRIIGSAEHDHDRVGTALHSGPSVGQT--------ESFSRPVS 311
               GEVSIRIIG+ E +HDRVG  + S P+VG T        E F R VS
Sbjct: 85  PGGSGEVSIRIIGAGEQEHDRVGNVVPS-PAVGGTLREGDGENEVFGRTVS 134


>ref|XP_004249023.1| PREDICTED: RING finger and transmembrane domain-containing protein
           2-like [Solanum lycopersicum]
          Length = 477

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/111 (42%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
 Frame = +3

Query: 3   NGVHISASTILRSPLSTLLEYTGILRTRXXXXXXXXXXXXGAQVGFRSDLXXXXXXXXXX 182
           +GV +SA+ + RSPLSTLLEY+GILRTR             +Q   R D           
Sbjct: 30  HGVQLSAANLFRSPLSTLLEYSGILRTRSSHTETDSLI--NSQFQPRLD---DAGTSPAS 84

Query: 183 XXXXGEVSIRIIGSAEHDHDRVGTALHSGPSVGQT--------ESFSRPVS 311
               GEVSIRIIG+ E +HDRVG  + S P+VG T        E F R +S
Sbjct: 85  PGGSGEVSIRIIGAGEQEHDRVGNVVPS-PAVGGTLREGDGENEVFGRTIS 134


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