BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00045654
         (478 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial...   128   9e-28
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp...    82   1e-13
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...    80   3e-13
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...    79   5e-13
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlise...    70   2e-10
ref|XP_007033221.1| maize chloroplast splicing factor CRS1, puta...    64   3e-08
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta...    64   3e-08
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta...    64   3e-08
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta...    64   3e-08
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta...    64   3e-08
ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phas...    63   5e-08
ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prun...    60   3e-07
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...    59   5e-07
ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, part...    59   9e-07
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...    58   2e-06
ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Popu...    57   2e-06
emb|CAC01859.1| putative protein [Arabidopsis thaliana]                57   3e-06
ref|NP_197122.2| chloroplast splicing factor CRS1-like protein [...    57   3e-06
ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrat...    55   8e-06

>gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial [Mimulus
           guttatus]
          Length = 702

 Score =  128 bits (321), Expect = 9e-28
 Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 7/122 (5%)
 Frame = +3

Query: 129 RIERGSEDSSAQSSKSVPHSRSKLKAPTAPWMAEPLFVKPNE-MESMKRRKNKGLELDRI 305
           +IE  + DS  +S + +PHSRS +KAPTAPWM  PL VKP+E +ES + R  K     R 
Sbjct: 4   KIEHENRDSRKESPEHIPHSRSTIKAPTAPWMNGPLLVKPSEILESRRTRTRKHFAAGRN 63

Query: 306 ------GEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLEAFSKNHESRKFKFAPG 467
                 G HPD DLTGKVGGARG++AMKKI+K  EKLQ+T ++E   KN E+ KFKFAPG
Sbjct: 64  DGEHTGGGHPDVDLTGKVGGARGKVAMKKIYKGIEKLQDTQNVEEPGKNLENLKFKFAPG 123

Query: 468 AL 473
           AL
Sbjct: 124 AL 125


>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 766

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
 Frame = +3

Query: 48  STSSNYSVIAFSSSRNNGGN-FRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTAPWM 224
           S S N     FSS  N+  N  ++VE   +E  ++D  + SS         +K PTAPWM
Sbjct: 31  SKSFNSKFTTFSSQSNDNNNPIKKVEQCNLEFENQDYGSSSSG--------IKGPTAPWM 82

Query: 225 AEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQ 401
             PL ++PN+ ++  K RK K     +  ++P++ L+GKV G RG+ AMK I++  +KLQ
Sbjct: 83  RGPLLLEPNQVLDLSKSRKKKDTNFAKT-QNPNDALSGKVSGGRGKKAMKMIYQGIDKLQ 141

Query: 402 ETHDLEAFSKNHESR-KFKFAPGAL 473
           ET   E      + + +F+F PG+L
Sbjct: 142 ETQIGECTQVETDVKVEFQFPPGSL 166


>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
 Frame = +3

Query: 48  STSSNYSVIAFSSSRNNGGN-FRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTAPWM 224
           S S N    +FSS  N+  N  +  E   +E  ++D  + SS         +K PTAPWM
Sbjct: 31  SKSFNSKFTSFSSQYNDNNNPIKNEEQYNLEFENQDYGSSSSG--------IKGPTAPWM 82

Query: 225 AEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQ 401
             PL ++PN+ ++  K RK K     +  ++P++ L+GKV G RG+ AMK I++  +KLQ
Sbjct: 83  RGPLLLEPNQFLDLSKSRKKKDANFAKT-QNPNDALSGKVSGGRGKKAMKMIYQGIDKLQ 141

Query: 402 ETHDLEAFSKNHESR-KFKFAPGAL 473
           ET   E      +++ +F+F PG+L
Sbjct: 142 ETQIGEGTQVETDAKVEFQFPPGSL 166


>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/145 (32%), Positives = 71/145 (48%)
 Frame = +3

Query: 18  PTRVSTPFTTSTSSNYSVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSK 197
           P     P  +++ SN S+   +  R +      +        +    + SS+ V  + + 
Sbjct: 13  PNHSQFPSNSNSLSNSSIRILNPQRIHSFKPPPISATTTATTNHPDHSISSQPVSGTDAA 72

Query: 198 LKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKI 377
           +K PTAPWM  PL ++PNE+  + + + K +      E PD  LT KV G RG  AMKKI
Sbjct: 73  IKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKI 132

Query: 378 FKSFEKLQETHDLEAFSKNHESRKF 452
            +S  KLQETH  +   +N E  +F
Sbjct: 133 MQSIVKLQETHTSDETQENTEEFEF 157


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
           gi|223544130|gb|EEF45655.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 742

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
 Frame = +3

Query: 174 SVPHSRSK--LKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGG 347
           SVP+S+S   +K PTAPWM  PL ++P+E+ ++ + +NK    +   E  D+ LTGK  G
Sbjct: 48  SVPNSQSNAPIKVPTAPWMKGPLLLQPHELINLSKPRNKNSSNNANIEKSDKVLTGKESG 107

Query: 348 ARGRLAMKKIFKSFEKLQETHDLE 419
            RG+ AM+KI KS E+LQE   LE
Sbjct: 108 VRGKKAMEKIVKSIEQLQENQALE 131


>gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlisea aurea]
          Length = 668

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
 Frame = +3

Query: 186 SRSKLKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLA 365
           S   + APTAPWM +PLFV P+++  +++   K    ++  +  D+DL+ KVG  R +LA
Sbjct: 1   SSESVSAPTAPWMRKPLFVNPSQLLDLRKSPIKKNSFNK--QRLDKDLSEKVGNGRNKLA 58

Query: 366 MKKIFKSFEKLQETH---DLEAFSKNHESRKFKFAPGAL 473
           M++IF+  +KLQE+    +  A   + ++ +FKF PG L
Sbjct: 59  MRQIFRGIKKLQESRPSSEAAATEGSPKNFEFKFRPGEL 97


>ref|XP_007033221.1| maize chloroplast splicing factor CRS1, putative isoform 5
           [Theobroma cacao] gi|508712250|gb|EOY04147.1| maize
           chloroplast splicing factor CRS1, putative isoform 5
           [Theobroma cacao]
          Length = 788

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +3

Query: 66  SVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTAPWMAEPLFVK 245
           S I FSSS N+  N  +      E  S +++++ S S   +   +K PTAPWM  PL ++
Sbjct: 47  SPIPFSSSLNSSQNPSKTHK---ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQ 103

Query: 246 PNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLE 419
           P+E+ +  +  +K     +  + PD+ L GK  G RG+  MKKI ++ E LQ    LE
Sbjct: 104 PHEVLNPSKSTSKKSSNSK-AKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLE 160


>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4
           [Theobroma cacao] gi|508712249|gb|EOY04146.1| maize
           chloroplast splicing factor CRS1, putative isoform 4
           [Theobroma cacao]
          Length = 767

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +3

Query: 66  SVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTAPWMAEPLFVK 245
           S I FSSS N+  N  +      E  S +++++ S S   +   +K PTAPWM  PL ++
Sbjct: 21  SPIPFSSSLNSSQNPSKTHK---ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQ 77

Query: 246 PNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLE 419
           P+E+ +  +  +K     +  + PD+ L GK  G RG+  MKKI ++ E LQ    LE
Sbjct: 78  PHEVLNPSKSTSKKSSNSK-AKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLE 134


>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3
           [Theobroma cacao] gi|508712248|gb|EOY04145.1| maize
           chloroplast splicing factor CRS1, putative isoform 3
           [Theobroma cacao]
          Length = 788

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +3

Query: 66  SVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTAPWMAEPLFVK 245
           S I FSSS N+  N  +      E  S +++++ S S   +   +K PTAPWM  PL ++
Sbjct: 21  SPIPFSSSLNSSQNPSKTHK---ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQ 77

Query: 246 PNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLE 419
           P+E+ +  +  +K     +  + PD+ L GK  G RG+  MKKI ++ E LQ    LE
Sbjct: 78  PHEVLNPSKSTSKKSSNSK-AKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLE 134


>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2
           [Theobroma cacao] gi|508712247|gb|EOY04144.1| maize
           chloroplast splicing factor CRS1, putative isoform 2
           [Theobroma cacao]
          Length = 804

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +3

Query: 66  SVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTAPWMAEPLFVK 245
           S I FSSS N+  N  +      E  S +++++ S S   +   +K PTAPWM  PL ++
Sbjct: 47  SPIPFSSSLNSSQNPSKTHK---ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQ 103

Query: 246 PNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLE 419
           P+E+ +  +  +K     +  + PD+ L GK  G RG+  MKKI ++ E LQ    LE
Sbjct: 104 PHEVLNPSKSTSKKSSNSK-AKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLE 160


>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1
           [Theobroma cacao] gi|508712246|gb|EOY04143.1| maize
           chloroplast splicing factor CRS1, putative isoform 1
           [Theobroma cacao]
          Length = 818

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +3

Query: 66  SVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTAPWMAEPLFVK 245
           S I FSSS N+  N  +      E  S +++++ S S   +   +K PTAPWM  PL ++
Sbjct: 47  SPIPFSSSLNSSQNPSKTHK---ENRSLNNNSKFSVSKDPNNGPIKMPTAPWMKGPLLLQ 103

Query: 246 PNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFEKLQETHDLE 419
           P+E+ +  +  +K     +  + PD+ L GK  G RG+  MKKI ++ E LQ    LE
Sbjct: 104 PHEVLNPSKSTSKKSSNSK-AKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLE 160


>ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phaseolus vulgaris]
           gi|561012308|gb|ESW11169.1| hypothetical protein
           PHAVU_008G007700g [Phaseolus vulgaris]
          Length = 744

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
 Frame = +3

Query: 165 SSKSVPHSRSK-----LKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDL 329
           SS  +P+S +      +K PT PWM  PL ++PNE+  +   K+K  +L+R  E  D+DL
Sbjct: 24  SSSMLPNSNNTPSQLPIKGPTPPWMKGPLLLQPNELLDLSNPKSKKFKLER-QELSDKDL 82

Query: 330 TGKVGGARGRLAMKKIFKSFEKLQETHD 413
            GK   ARG+  MKKI +  EKL  TH+
Sbjct: 83  MGK--EARGKKTMKKIVEKVEKLHGTHN 108


>ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
           gi|462413463|gb|EMJ18512.1| hypothetical protein
           PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
 Frame = +3

Query: 156 SAQSSKSVPHSRSK----------LKAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRI 305
           S  S+ + P+S++           +KAPTAPWM  PL ++P+E+    + +NK    +  
Sbjct: 61  SLSSTTTTPNSKAPSEPNSSTDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHNNAK 120

Query: 306 GEHPDEDLTGKVGGARGRLAMKKIFKSFEKL 398
            E PD  L GK+ G RG  A+K+I +S E+L
Sbjct: 121 AEKPDTVLAGKLVGIRGDKAIKQIVQSIERL 151


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
           gi|557532797|gb|ESR43980.1| hypothetical protein
           CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/86 (38%), Positives = 49/86 (56%)
 Frame = +3

Query: 201 KAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIF 380
           K PTAPWM  P+ ++P+E+    + K K     +  +  D+ LT K  G RG+ AMKKI 
Sbjct: 60  KMPTAPWMRSPIVLQPDEIIKPSKPKTK-----KSFKKTDKGLTAKESGVRGKQAMKKII 114

Query: 381 KSFEKLQETHDLEAFSKNHESRKFKF 458
           ++ EKLQ+   L+   K  +  KF+F
Sbjct: 115 ENIEKLQKDQILDETQKK-DMEKFEF 139


>ref|XP_006287146.1| hypothetical protein CARUB_v10000322mg, partial [Capsella rubella]
           gi|482555852|gb|EOA20044.1| hypothetical protein
           CARUB_v10000322mg, partial [Capsella rubella]
          Length = 726

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
 Frame = +3

Query: 21  TRVSTPFTTSTSSNYSVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKL 200
           T++  P   S  +  S+I  SS   N       +  + ++  E+          HS + +
Sbjct: 27  TQMLAPLFLSARAFPSLITNSSLNPNQNPSNAAKTPQFDKFRENRG--------HSDAAI 78

Query: 201 KAPTAPWMAEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKI 377
           K PTAPWM  PL ++P+E +++ KR K +  E     E   + L  +  G RGR AMKKI
Sbjct: 79  KVPTAPWMKGPLLLRPDEILDAEKRNKPRKSE-----EKTFKALNRRESGVRGRKAMKKI 133

Query: 378 FKSFEKLQETHD 413
            ++ EKL E  D
Sbjct: 134 VRNVEKLDEDSD 145


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568857343|ref|XP_006482226.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/86 (38%), Positives = 48/86 (55%)
 Frame = +3

Query: 201 KAPTAPWMAEPLFVKPNEMESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIF 380
           K PTAPWM  P+ ++P+E+    + K K     +  +  D+ LT K  G RG+ AMKKI 
Sbjct: 54  KMPTAPWMRSPIVLQPDEIIKPSKPKTK-----KSFKKTDKGLTAKESGVRGKQAMKKII 108

Query: 381 KSFEKLQETHDLEAFSKNHESRKFKF 458
           ++ EKLQ+   L+   K     KF+F
Sbjct: 109 ENIEKLQKDQILDETQKK-VMEKFEF 133


>ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Populus trichocarpa]
           gi|550339039|gb|EEE93652.2| hypothetical protein
           POPTR_0005s15420g [Populus trichocarpa]
          Length = 729

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +3

Query: 174 SVPHSRSKLKAPTAPWMAEPLFVKPNEMESMKRRKN-KGLELDRIGEHPDEDLTGKVGGA 350
           S  ++ + +K PT PW+  PL ++P+E+ ++   KN K ++ D+I E  D+ LT K  G 
Sbjct: 60  SQSNATTNVKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKNDKI-EKDDKALTAKESGV 118

Query: 351 RGRLAMKKIFKSFEKLQETHDLE 419
           RG  AM +I KS E+LQ   +L+
Sbjct: 119 RGNKAMIQIVKSVERLQRDENLK 141


>emb|CAC01859.1| putative protein [Arabidopsis thaliana]
          Length = 718

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 39  FTTSTSSNY-SVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTA 215
           FT   +S + S  AF S   N  + RR +  + ++  E+           S + +K PTA
Sbjct: 36  FTQMLNSLFLSARAFPSLITNSSS-RRAKSSQFDQFRENRGV--------SDAAIKVPTA 86

Query: 216 PWMAEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFE 392
           PWM  PL ++P+E +++ KR K + +E     E   + L  +  G RG+ AMKKI ++ E
Sbjct: 87  PWMKGPLLLRPDEILDTKKRNKPRKVE-----EKTFKALNRRESGVRGKKAMKKIVRNVE 141

Query: 393 KLQETHDLE 419
           KL E  D E
Sbjct: 142 KLDEDSDSE 150


>ref|NP_197122.2| chloroplast splicing factor CRS1-like protein [Arabidopsis
           thaliana] gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName:
           Full=Chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
           splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
           SPLICING 1; Flags: Precursor gi|332004875|gb|AED92258.1|
           chloroplast splicing factor CRS1-like protein
           [Arabidopsis thaliana]
          Length = 720

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 39  FTTSTSSNY-SVIAFSSSRNNGGNFRRVEDRRIERGSEDSSAQSSKSVPHSRSKLKAPTA 215
           FT   +S + S  AF S   N  + RR +  + ++  E+           S + +K PTA
Sbjct: 36  FTQMLNSLFLSARAFPSLITNSSS-RRAKSSQFDQFRENRGV--------SDAAIKVPTA 86

Query: 216 PWMAEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRLAMKKIFKSFE 392
           PWM  PL ++P+E +++ KR K + +E     E   + L  +  G RG+ AMKKI ++ E
Sbjct: 87  PWMKGPLLLRPDEILDTKKRNKPRKVE-----EKTFKALNRRESGVRGKKAMKKIVRNVE 141

Query: 393 KLQETHDLE 419
           KL E  D E
Sbjct: 142 KLDEDSDSE 150


>ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
           gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 727

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +3

Query: 186 SRSKLKAPTAPWMAEPLFVKPNE-MESMKRRKNKGLELDRIGEHPDEDLTGKVGGARGRL 362
           S + +K PTAPWM  PL ++P+E +++ KR K + +E     E   + L  +  G RG+ 
Sbjct: 46  SDAAMKVPTAPWMKGPLLLRPDEIVDTEKRNKPRKVE-----EKTFKALNRRESGVRGKK 100

Query: 363 AMKKIFKSFEKLQETHDLE 419
           AMKKI ++ EKL E  D E
Sbjct: 101 AMKKIVRNVEKLDEGSDSE 119