BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00045147
         (731 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   235   1e-59
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   226   5e-57
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   221   3e-55
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               219   8e-55
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   216   5e-54
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       216   8e-54
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   215   1e-53
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   214   2e-53
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   214   2e-53
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   214   3e-53
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   212   9e-53
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                211   2e-52
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   211   3e-52
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   209   6e-52
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           209   6e-52
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   209   1e-51
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               208   1e-51
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   206   7e-51
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   202   1e-49
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              201   2e-49

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  235 bits (599), Expect = 1e-59
 Identities = 111/241 (46%), Positives = 160/241 (66%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
            FFK++W  ++ ++   + EFF+   + R +N  +V+L+PK  H   V +FRPIAC  V+Y
Sbjct: 465  FFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIY 524

Query: 187  KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
            KII+K+LTNRM  ++ ++V+ AQ+ FI GR I DN  LA ELI+ Y R   ++ RC++K+
Sbjct: 525  KIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTR-KHMSPRCIMKV 583

Query: 367  DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
            D+RKAYD + W FL+ +LY   F   F+ WIM CV++ ++S+ +NG      + ++GLRQ
Sbjct: 584  DIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQ 643

Query: 547  GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
            GDPMSP LF LCM+Y            DF +HPKC+R  ITHL FADDLL+F R D SS+
Sbjct: 644  GDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSL 703

Query: 727  E 729
            +
Sbjct: 704  D 704


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  226 bits (577), Expect = 5e-57
 Identities = 109/240 (45%), Positives = 157/240 (65%)
 Frame = +1

Query: 7   FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
           FFK +W I+   V DA+ +FF  G + + +N T ++L+PK  +   V +FRPIAC +V+Y
Sbjct: 148 FFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIY 207

Query: 187 KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
           KII+KILT+RM  +L+ +VS  Q+AF+KGR I DN  L+ EL+K Y R  GI+ RCMVKI
Sbjct: 208 KIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSR-KGISPRCMVKI 266

Query: 367 DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
           DL+KAY+ + W F+K ++  L F   F+ W+M C+T+ +++  ING        ++GLRQ
Sbjct: 267 DLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFAAKKGLRQ 326

Query: 547 GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
           GDP+SP LF++CM+Y             F +HP+C R  + H+ F DDLLLF RGD  S+
Sbjct: 327 GDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLFSRGDVDSV 386


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  221 bits (562), Expect = 3e-55
 Identities = 108/242 (44%), Positives = 154/242 (63%)
 Frame = +1

Query: 1    SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
            S FFK++W +++ ++ + + +FF  G + + +N T V+LIPK        D+RPIAC + 
Sbjct: 466  SVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCST 525

Query: 181  VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
            +YKII+KILT R+  ++ ++V  AQ  FI  R I DN  LA ELI+ Y R   ++ RC++
Sbjct: 526  LYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNR-RHVSPRCVI 584

Query: 361  KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
            K+D+RKAYD + W FL+ +L  L F   FI WIM CV + ++SI +NG        Q+GL
Sbjct: 585  KVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGL 644

Query: 541  RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
            RQGDP+SP LF L M+Y            +F +HPKC+R K+THL FADDLL+F R D S
Sbjct: 645  RQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADAS 704

Query: 721  SM 726
            S+
Sbjct: 705  SI 706


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  219 bits (558), Expect = 8e-55
 Identities = 104/243 (42%), Positives = 153/243 (62%)
 Frame = +1

Query: 1   SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
           S F+K  W I+  + T  V  FF KG + + +N  I++LIPK      + D+RPI+C NV
Sbjct: 125 SEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNV 184

Query: 181 VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
           +YK+I+KI+ NR+  LL + ++  Q+AF+K R + +N  LA EL+K Y + S I+ARC +
Sbjct: 185 LYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDS-ISARCAI 243

Query: 361 KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
           KID+ KA+D + W FL   L  +NF P FI+WI  C+T+ +FS+ +NG   G+ + +RGL
Sbjct: 244 KIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGL 303

Query: 541 RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
           RQG  +SP LF++CMD              F +HPKC R  +THL+FADDL++   G   
Sbjct: 304 RQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTR 363

Query: 721 SME 729
           S+E
Sbjct: 364 SIE 366


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  216 bits (551), Expect = 5e-54
 Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 4/244 (1%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTN--- 177
            FFK  W+++  +VTDAV+EFF+  ++L++ N T + LIPK T+   ++DFRPI+C +   
Sbjct: 423  FFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPKITNASKMNDFRPISCNDFGP 482

Query: 178  -VVYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARC 354
              +YK+I ++LTNR+  LL +++SP Q+AF+ GR + +N  LA EL++ Y R   I  R 
Sbjct: 483  ITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYNR-QNIDPRG 541

Query: 355  MVKIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQR 534
            M+K+DLRKA+D I WDF+   L  +     F+YWI  C+++PTFS+ +NG   GF +  R
Sbjct: 542  MLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTR 601

Query: 535  GLRQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGD 714
            GLRQG+P+SP LF+L M+                YHPK     I+HL FADD+++F  G 
Sbjct: 602  GLRQGNPLSPFLFVLAMEVFSSLLNSRFQAGYIHYHPKTSPLSISHLMFADDIMVFFDGG 661

Query: 715  PSSM 726
             SS+
Sbjct: 662  SSSL 665


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  216 bits (549), Expect = 8e-54
 Identities = 105/240 (43%), Positives = 153/240 (63%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
            FF  +W+IV  +VTDA+ EFFS G +L++ N T + LIPK  +  C SDFRPI+C N +Y
Sbjct: 474  FFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLY 533

Query: 187  KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
            K+I ++LT+R+  LL  ++S AQ+AF+ GR + +N  LA +L+  Y   S I+ R M+K+
Sbjct: 534  KVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGY-NWSNISPRGMLKV 592

Query: 367  DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
            DL+KA+D + W+F+   L  L     FI WI  C+++PTF+++INGG  GF +  +GLRQ
Sbjct: 593  DLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQ 652

Query: 547  GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
            GDP+SP LF+L M+                YHPK     I+HL FADD+++F  G   S+
Sbjct: 653  GDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSL 712


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  215 bits (547), Expect = 1e-53
 Identities = 102/242 (42%), Positives = 157/242 (64%)
 Frame = +1

Query: 1    SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
            S FFK+ W+IV   +  AV EFF  G +L + N T V+++PK  +   +++FRPI+C N 
Sbjct: 471  SEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNA 530

Query: 181  VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
            +YK+I+K+L  R+  +L   +SP+Q+AF+KGR +T+N  LA EL++ + + + I++R ++
Sbjct: 531  IYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQAN-ISSRGVL 589

Query: 361  KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
            K+DLRKA+D + W F+ E L   N  P F+ WI  C+TS +FSI ++G   G+ +G +GL
Sbjct: 590  KVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGL 649

Query: 541  RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
            RQGDP+SPSLF++ M+                YHPK    +I+ LAFADDL++F  G  S
Sbjct: 650  RQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKAS 709

Query: 721  SM 726
            S+
Sbjct: 710  SL 711


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  214 bits (545), Expect = 2e-53
 Identities = 105/243 (43%), Positives = 152/243 (62%)
 Frame = +1

Query: 1    SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
            S FFK  W I+  + T AV  FF+KG + + +N TI++LIPK T    + D+RPI+C NV
Sbjct: 478  SEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNV 537

Query: 181  VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
            +YK+I+KI+ NR+  +L K ++  Q+AF+K R + +N  LA EL+K Y + + I+ RC +
Sbjct: 538  LYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDT-ISTRCAI 596

Query: 361  KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
            KID+ KA+D + W FL  V   L F   FI+WI  C+T+ +FS+ +NG   G+ +  RGL
Sbjct: 597  KIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGL 656

Query: 541  RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
            RQG  +SP LF++CMD              F YHPKC    +THL+FADDL++   G   
Sbjct: 657  RQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIR 716

Query: 721  SME 729
            S+E
Sbjct: 717  SIE 719


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  214 bits (545), Expect = 2e-53
 Identities = 103/242 (42%), Positives = 155/242 (64%)
 Frame = +1

Query: 1    SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
            S FFK  W +V  +VT+AV EFF  G +L++ N T + LIPK T+   ++DFRPI+C N 
Sbjct: 473  SEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNT 532

Query: 181  VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
            +YK+I K+LT+R+  LL++++SP+Q+AF+ GR +++N  LA E++  Y     I++R M+
Sbjct: 533  LYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGY-NTKNISSRGML 591

Query: 361  KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
            K+DLRKA+D + WDF+      L     F+ WI  C+++P FS+ +NG + GF +  +GL
Sbjct: 592  KVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGL 651

Query: 541  RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
            RQGDP+SP LF+L M+                YHPK     I+HL FADD+++F  G  S
Sbjct: 652  RQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSS 711

Query: 721  SM 726
            S+
Sbjct: 712  SL 713


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  214 bits (544), Expect = 3e-53
 Identities = 103/242 (42%), Positives = 155/242 (64%)
 Frame = +1

Query: 1    SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
            S FFK  W +V  +VT+AV EFF  G +L++ N T + LIPK T+   ++DFRPI+C N 
Sbjct: 473  SEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNT 532

Query: 181  VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
            +YK+I K+LT+R+  LL++++SP+Q+AF+ GR +++N  LA E++  Y     I++R M+
Sbjct: 533  LYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGY-NTKNISSRGML 591

Query: 361  KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
            K+DLRKA+D + WDF+      L     F+ WI  C+++P FS+ +NG + GF +  +GL
Sbjct: 592  KVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGL 651

Query: 541  RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
            RQGDP+SP LF+L M+                YHPK     I+HL FADD+++F  G  S
Sbjct: 652  RQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSS 711

Query: 721  SM 726
            S+
Sbjct: 712  SL 713


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  212 bits (540), Expect = 9e-53
 Identities = 105/243 (43%), Positives = 148/243 (60%)
 Frame = +1

Query: 1    SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
            S FFK  W++   D   A+  FF KG + + LN TI++LIPK      + D+RPI+C NV
Sbjct: 775  SEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNV 834

Query: 181  VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
            +YK+I+KIL NR+  LL   +   Q+AF+K R + +N  LA EL+K Y + S +T RC +
Sbjct: 835  LYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKES-VTPRCAM 893

Query: 361  KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
            KID+ KA+D + W FL   L  LNF   F +WI  C+++ TFS+ +NG   GF    RGL
Sbjct: 894  KIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGL 953

Query: 541  RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
            RQG  +SP LF++CM+             +  YHPKC++  +THL FADDL++F  G   
Sbjct: 954  RQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQW 1013

Query: 721  SME 729
            S+E
Sbjct: 1014 SIE 1016


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  211 bits (538), Expect = 2e-52
 Identities = 103/243 (42%), Positives = 148/243 (60%)
 Frame = +1

Query: 1   SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
           S FFK  W+I   D   A+  FF KG + + LN TI++LIPK      + D+RPI+C NV
Sbjct: 51  SEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNV 110

Query: 181 VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
           +YK+I+KI+ NR+  +L   +   Q+AF++ R + +N  LA EL+K Y + S I+ RC +
Sbjct: 111 IYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDS-ISPRCAM 169

Query: 361 KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
           KID+ KA+D + W FL   L  LNF   F +WI  C+++ TFS+ +NG   GF   +RGL
Sbjct: 170 KIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGL 229

Query: 541 RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
           RQG  +SP LF++CM+             +  YHPKC +  +THL FADDL++F  G   
Sbjct: 230 RQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQR 289

Query: 721 SME 729
           S+E
Sbjct: 290 SVE 292


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  211 bits (536), Expect = 3e-52
 Identities = 108/243 (44%), Positives = 148/243 (60%), Gaps = 3/243 (1%)
 Frame = +1

Query: 7    FFKRNWAIVRGD--VTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
            FF++ W ++ GD  V  AV EFFS G +L +LN TI++L+PK  +   +SDFRPI+C N 
Sbjct: 300  FFQKAWLVI-GDNVVAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSDFRPISCCNT 358

Query: 181  VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
             YKII K+L NR+   LH +V P+Q+ FI GR I DN  LAQE+I  Y +  G   RC  
Sbjct: 359  FYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADG-QPRCTF 417

Query: 361  KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
             +D+ KA D + WDF+   L   N     I WI +C++S  FS+ +NG   GF   +RGL
Sbjct: 418  MVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGL 477

Query: 541  RQGDPMSPSLFLLCMDYXXXXXXXXXXXXD-FTYHPKCDRDKITHLAFADDLLLFGRGDP 717
            RQGDP+SP LF++ M+               F YH +CD+  ++HL FADDLL+F  GD 
Sbjct: 478  RQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDE 537

Query: 718  SSM 726
            +S+
Sbjct: 538  NSV 540


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  209 bits (533), Expect = 6e-52
 Identities = 100/240 (41%), Positives = 155/240 (64%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
            FF+  W+I+  +V  A++EFF  G +L++ N T + LIPKT++   +S+FRPI+C N +Y
Sbjct: 334  FFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLY 393

Query: 187  KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
            K+I+K+LT+R+  LL  ++  +Q+AF+ GR + +N  LA E++  Y R++ I+ R M+K+
Sbjct: 394  KVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLN-ISPRGMLKV 452

Query: 367  DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
            DL+KA+D + W+F+   L  L     +I WI  C+T+P+F+I++NG   GF R  +GLRQ
Sbjct: 453  DLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQ 512

Query: 547  GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
            GDP+SP LF+L M+                YHPK     I+HL FADD+++F  G  SSM
Sbjct: 513  GDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSM 572


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  209 bits (533), Expect = 6e-52
 Identities = 100/240 (41%), Positives = 155/240 (64%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
            FF+  W+I+  +V  A++EFF  G +L++ N T + LIPKT++   +S+FRPI+C N +Y
Sbjct: 334  FFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLY 393

Query: 187  KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
            K+I+K+LT+R+  LL  ++  +Q+AF+ GR + +N  LA E++  Y R++ I+ R M+K+
Sbjct: 394  KVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLN-ISPRGMLKV 452

Query: 367  DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
            DL+KA+D + W+F+   L  L     +I WI  C+T+P+F+I++NG   GF R  +GLRQ
Sbjct: 453  DLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQ 512

Query: 547  GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
            GDP+SP LF+L M+                YHPK     I+HL FADD+++F  G  SSM
Sbjct: 513  GDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSM 572


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  209 bits (531), Expect = 1e-51
 Identities = 103/243 (42%), Positives = 151/243 (62%)
 Frame = +1

Query: 1   SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
           S F+K +W I+  +V  A+  FF+KG + + +N TI++LIPK      + D+RPI+C NV
Sbjct: 199 SEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNV 258

Query: 181 VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
           +YK I+KIL NR+  +L K +   Q+AF+K R + +N  LA EL+K Y + S I+ RC +
Sbjct: 259 LYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDS-ISTRCAM 317

Query: 361 KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
           KID+ KA+D + W FL  VL  +NF   FI+WI  C+++ +FSI +NG   G+ R  RGL
Sbjct: 318 KIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGL 377

Query: 541 RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
           RQG  +SP LF++ MD             +F YHP+C    +THL FADDL++   G   
Sbjct: 378 RQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIR 437

Query: 721 SME 729
           S++
Sbjct: 438 SVD 440


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  208 bits (530), Expect = 1e-51
 Identities = 101/243 (41%), Positives = 150/243 (61%)
 Frame = +1

Query: 1   SAFFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNV 180
           S FFK +W I+  +   A+  FF+ G + + +N TI++LIPK      + D+RPI+C NV
Sbjct: 31  SEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPISCCNV 90

Query: 181 VYKIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMV 360
           +YK+I+KIL NR+  LL + ++  Q++F+K R + +N  LA +L+K Y + S I+ RC +
Sbjct: 91  MYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDS-ISERCAI 149

Query: 361 KIDLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGL 540
           KID+ KA D + W FL   L  ++F   FI+WI  C+T+P+FS+ +NG   GF +  RGL
Sbjct: 150 KIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGL 209

Query: 541 RQGDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPS 720
           RQG  +SP LF++CMD                YHP C R  +THL+FADDL++   G   
Sbjct: 210 RQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCR 269

Query: 721 SME 729
           S+E
Sbjct: 270 SIE 272


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  206 bits (524), Expect = 7e-51
 Identities = 102/240 (42%), Positives = 150/240 (62%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
            FF   W I+ G+VT+A++EFF+ G +L++ N T + LIPK T+   +SDFRPI+C N VY
Sbjct: 371  FFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVY 430

Query: 187  KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
            K+I+K+LT+R+   L   +S +Q+AF+ GR   +N  LA EL+  Y +   I    M+K+
Sbjct: 431  KVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNK-KNIAPSSMLKV 489

Query: 367  DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
            DLRKA+D + WDF+   L  LN    F  WI+ C+++ +FS+ +NG + G     +GLRQ
Sbjct: 490  DLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQ 549

Query: 547  GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
            GDPMSP LF+L M+                YHPK  + +I+HL FADD+++F  G  SS+
Sbjct: 550  GDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSL 609


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  202 bits (513), Expect = 1e-49
 Identities = 95/241 (39%), Positives = 149/241 (61%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
            FFK  W ++  D+  A+  FF KG + + +N TI++LI K      + D+RPI+C NV+Y
Sbjct: 627  FFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEVSGMKDYRPISCCNVLY 686

Query: 187  KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
            KI++K++ NR+  +L   ++P Q+AFIK R + +N  LA EL+K Y + S I++R  +KI
Sbjct: 687  KIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKES-ISSRSALKI 745

Query: 367  DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
            D+ KA+D + W FL  VL  ++    FI+WI  C+ + +FS+ +NG   GF R +RGLRQ
Sbjct: 746  DISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQ 805

Query: 547  GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
            G  +SP L+++CM+               +YHP+C    +THL FADD+++F  G   S+
Sbjct: 806  GCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSI 865

Query: 727  E 729
            +
Sbjct: 866  Q 866


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  201 bits (512), Expect = 2e-49
 Identities = 101/240 (42%), Positives = 144/240 (60%)
 Frame = +1

Query: 7    FFKRNWAIVRGDVTDAVNEFFSKGLILRKLNHTIVSLIPKTTHDPCVSDFRPIACTNVVY 186
            FF   WAIV+  V  A+ EFF  G + R  N T ++LIPK T    ++ FRP+AC   +Y
Sbjct: 517  FFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIY 576

Query: 187  KIITKILTNRMSPLLHKLVSPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKI 366
            K+IT+I++ R+   + + V   Q  FIKGR + +N  LA EL+  +E   G T R  +++
Sbjct: 577  KVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFE-ADGETTRGCLQV 635

Query: 367  DLRKAYDCISWDFLKEVLYGLNFHPCFIYWIMTCVTSPTFSIAINGGAHGFIRGQRGLRQ 546
            D+ KAYD ++W+FL  +L  L+    FI+WI  C++S ++SIA NG   GF +G++G+RQ
Sbjct: 636  DISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQ 695

Query: 547  GDPMSPSLFLLCMDYXXXXXXXXXXXXDFTYHPKCDRDKITHLAFADDLLLFGRGDPSSM 726
            GDPMS  LF+L MD              F  HP C    ITHL+FADD+L+F  G  SS+
Sbjct: 696  GDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSI 755