BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00045032
         (586 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   201   9e-50
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   132   5e-29
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               126   5e-27
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                126   5e-27
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        125   7e-27
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     123   3e-26
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   123   3e-26
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         123   4e-26
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           123   4e-26
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   121   1e-25
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     120   2e-25
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   120   3e-25
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   117   3e-24
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   117   3e-24
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   115   7e-24
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   115   7e-24
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...   115   9e-24
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g...   115   9e-24
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   112   6e-23
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   112   1e-22

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  201 bits (512), Expect = 9e-50
 Identities = 100/146 (68%), Positives = 120/146 (82%)
 Frame = -1

Query: 577 AVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVSMAD 398
           A VAE DTNSEED+ LVA E +H +DVWVLDS ASYH+CP RE+F+TY+Q+DGG++SMA+
Sbjct: 252 AAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMAN 311

Query: 397 NVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYVR 218
           + V KVVG GSI+IRT DG FCTL+EV HVP MTKNLISLSLLD KGFS+ G  G + V 
Sbjct: 312 SSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVW 371

Query: 217 KGSKVILTGLKRGTLYTLQGSTMTGT 140
           KGS +IL G+ RGTLY LQGST+TG+
Sbjct: 372 KGSNLILKGVMRGTLYFLQGSTVTGS 397


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  132 bits (333), Expect = 5e-29
 Identities = 67/155 (43%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           +G A VA  D   + +L++        +D W+LD+  +YH+CPNR++F+TY+ + GGNV 
Sbjct: 213 QGKAAVA-TDNKPDAELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVL 271

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M DN   KV G+G+I+I+  DG   TLS+V H+P + +NLISLS LD KG+ + G  G +
Sbjct: 272 MGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGIL 331

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY LQG+T+ G    VT
Sbjct: 332 KVTKGSLVVMKADIKNADLYHLQGTTIVGNVAAVT 366


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  126 bits (316), Expect = 5e-27
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ + GG V 
Sbjct: 88  EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVL 146

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 147 MGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGIL 206

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY LQG+T+ G    V+
Sbjct: 207 KVTKGSLVVMKADIKSANLYHLQGTTILGNVATVS 241


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  126 bits (316), Expect = 5e-27
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ + GG V 
Sbjct: 256 EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVL 314

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 315 MGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGIL 374

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY LQG+T+ G    V+
Sbjct: 375 KVTKGSLVVMKADIKSANLYHLQGTTILGNVATVS 409


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  125 bits (315), Expect = 7e-27
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ + GG V 
Sbjct: 271 EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVL 329

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 330 MGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 389

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY LQG+T+ G    V+
Sbjct: 390 KVTKGSLVVMKASIKSANLYHLQGTTILGNVATVS 424


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  123 bits (309), Expect = 3e-26
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ L GG V 
Sbjct: 306 EGKAAVV-TDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVL 364

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 365 MGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 424

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 425 KVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 459


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  123 bits (309), Expect = 3e-26
 Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ L GG V 
Sbjct: 306 EGKAAVV-TDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVL 364

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 365 MGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 424

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 425 KVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 459


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/155 (39%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ + GG V 
Sbjct: 103 EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVL 161

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG ++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 162 MGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 221

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 222 KVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 256


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/155 (39%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ + GG V 
Sbjct: 103 EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVL 161

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG ++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 162 MGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 221

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 222 KVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 256


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  121 bits (304), Expect = 1e-25
 Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ + GG V 
Sbjct: 237 EGKAAVV-TDEKSDAELLVAYVGCAQTSDQWILDTACTYHMCPNRDWFATYETVQGGTVL 295

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LIS   LD KG+ + G  G +
Sbjct: 296 MGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGIL 355

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 356 KVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 390


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  120 bits (302), Expect = 2e-25
 Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+LD+  +YH+CPNR++F+TY+ + GG V 
Sbjct: 180 EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVL 238

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TL +V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 239 MGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 298

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 299 KVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVS 333


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  120 bits (301), Expect = 3e-25
 Identities = 62/147 (42%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
 Frame = -1

Query: 577 AVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNV-SMA 401
           +VV  AD +   D ++V       +D W+LD+  S+H+C NR++FS+YK +  G+V  M 
Sbjct: 160 SVVTSADNSDSGDCLVVFVVCVSSHDEWILDTTCSFHICINRDWFSSYKSVQNGDVVRMG 219

Query: 400 DNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYV 221
           D+   ++VGIGS++I+T DG+  TL +V H+P+M +NLISLS LD +G+ + G  G + V
Sbjct: 220 DDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYKYSGSGGVVKV 279

Query: 220 RKGSKVILTG-LKRGTLYTLQGSTMTG 143
            KGS V + G +    LY L+GST+ G
Sbjct: 280 SKGSLVYMIGDMNSANLYVLRGSTLHG 306


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score =  117 bits (292), Expect = 3e-24
 Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+L++   YH+CPNR++F+TY+ +  G V 
Sbjct: 478 EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVL 536

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 537 MGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 596

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 597 KVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 631


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  117 bits (292), Expect = 3e-24
 Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
 Frame = -1

Query: 586 EGFAVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVS 407
           EG A V   D  S+ +L++     +  +D W+L++   YH+CPNR++F+TY+ +  G V 
Sbjct: 271 EGKAAVV-TDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVL 329

Query: 406 MADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAM 227
           M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL  LD KG+ + G  G +
Sbjct: 330 MGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 389

Query: 226 YVRKGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 125
            V KGS V++   +K   LY L+G+T+ G    V+
Sbjct: 390 KVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 424


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score =  115 bits (289), Expect = 7e-24
 Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 577 AVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNV-SMA 401
           +VV  A+ +   D ++V       +D W+LD+  S+H+C NR++FS+YK +   +V  M 
Sbjct: 265 SVVTSAENSDSGDCLVVFAGYVASHDEWILDTACSFHICINRDWFSSYKSVQNEDVVRMG 324

Query: 400 DNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYV 221
           D+   ++VGIGS++I+T DG+  TL +V H+P M +NLISLS LD +G+ + G  G + V
Sbjct: 325 DDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKV 384

Query: 220 RKGSKVILTG-LKRGTLYTLQGSTMTGT 140
            KGS V + G +    LY L+GST+ G+
Sbjct: 385 SKGSLVYMIGDMNSANLYVLRGSTLHGS 412


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  115 bits (289), Expect = 7e-24
 Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 577 AVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNV-SMA 401
           +VV  A+ +   D ++V       +D W+LD+  S+H+C NR++FS+YK +  G+V  M 
Sbjct: 265 SVVTSAENSDSGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSSYKSVQNGDVVRMG 324

Query: 400 DNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYV 221
           D+   ++VGIGS++I+T DG+  TL +V H+P M +NLISLS LD +G+ +    G + V
Sbjct: 325 DDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSSSGGVVKV 384

Query: 220 RKGSKVILTG-LKRGTLYTLQGSTMTGT 140
            KGS V + G +    LY L+GST+ G+
Sbjct: 385 SKGSLVYMIGDMNSANLYVLRGSTLHGS 412


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score =  115 bits (288), Expect = 9e-24
 Identities = 59/148 (39%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
 Frame = -1

Query: 577 AVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNV-SMA 401
           +VV  A+ +   D ++V       +D W+LD+  S+H+C NR++FS+YK +  G+V  M 
Sbjct: 215 SVVTSAENSDSGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSSYKSVQNGDVVRMG 274

Query: 400 DNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYV 221
           D+   ++VGIGS++I+T DG+  TL +V ++P M +NLISLS LD +G+ + G  G + V
Sbjct: 275 DDNPHEIVGIGSVQIKTHDGMTRTLKDVRYIPGMARNLISLSTLDAEGYKYSGLGGVVKV 334

Query: 220 RKGSKV-ILTGLKRGTLYTLQGSTMTGT 140
            KGS V +++ +    LY L+GST+ G+
Sbjct: 335 SKGSLVYMISDMNSANLYVLRGSTLHGS 362


>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
           gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
           Japonica Group]
          Length = 759

 Score =  115 bits (288), Expect = 9e-24
 Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 577 AVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNV-SMA 401
           +VV  AD +   D ++V       +D W+LD+  S+H+C NR++FS+YK +  G+V  M 
Sbjct: 194 SVVTSADNSDSGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSSYKSVQNGDVVRMG 253

Query: 400 DNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYV 221
           D+    ++GIGS++I+T DG+  TL +  H+P M +NLISLS LD +G+ + G  G + V
Sbjct: 254 DDNPRGIMGIGSVQIKTHDGMTRTLKDARHIPGMARNLISLSTLDSEGYKYSGSGGVVKV 313

Query: 220 RKGSKVILTG-LKRGTLYTLQGSTMTGT 140
            KGS V + G +    LY L+GST+ G+
Sbjct: 314 SKGSLVYMIGDMNSANLYVLRGSTLHGS 341


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  112 bits (281), Expect = 6e-23
 Identities = 63/153 (41%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
 Frame = -1

Query: 577 AVVAEADTNSEEDL-VLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNVSMA 401
           A VAE  ++ E D+ ++V+   S   D W+LDS  +YH+CP R++F  +++LDGG V M 
Sbjct: 197 ANVAECKSDVESDISLIVSLSASLYLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMG 256

Query: 400 DNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYV 221
           ++   K VGIGSI++R  DG    L +V +VP++ KNLISL  L+ KG       G +  
Sbjct: 257 NDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKA 316

Query: 220 RKGSKVILTGLKRGTLYTLQGSTMTGTTGNVTS 122
             G+ V+L G+ +  LY  QGST+ GT    TS
Sbjct: 317 TSGALVMLKGVMKNNLYYYQGSTVVGTVAAATS 349


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  112 bits (279), Expect = 1e-22
 Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 577 AVVAEADTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNREYFSTYKQLDGGNV-SMA 401
           A  A +D +S + LV+ A   +  +D W+LDS  S+H+C  R +FS+YK +  G+V  M 
Sbjct: 264 ASAAASDDDSGDCLVVFAGCVAG-HDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMG 322

Query: 400 DNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLSLLDIKGFSFKG*RGAMYV 221
           D+    +VGIGS++I+T DG+  TL  V ++P M++NLISLS LD +G+ + G  G + V
Sbjct: 323 DDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKV 382

Query: 220 RKGSKVILTG-LKRGTLYTLQGSTMTGT 140
            KGS V L G L    LY L+G T+TG+
Sbjct: 383 SKGSLVCLKGDLNSAKLYVLRGCTLTGS 410