BLASTX nr result

ID: Mentha25_contig00042064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00042064
         (1421 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ28935.1| polyprotein [Phanerochaete chrysosporium RP-78]        242   3e-61
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  237   1e-59
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D...   233   1e-58
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              233   1e-58
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              233   2e-58
emb|CCO30980.1| Retrovirus-related Pol polyprotein from transpos...   233   2e-58
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   233   2e-58
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              232   3e-58
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   232   3e-58
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   231   5e-58
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       231   6e-58
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        231   8e-58
gb|AAZ28937.1| polyprotein [Phanerochaete chrysosporium RP-78]        230   1e-57
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     229   3e-57
gb|AFB73911.1| polyprotein [Citrus sinensis]                          229   3e-57
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              229   3e-57
gb|AFB73912.1| polyprotein [Citrus sinensis]                          228   7e-57
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]   228   7e-57
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   226   2e-56
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   224   6e-56

>gb|AAZ28935.1| polyprotein [Phanerochaete chrysosporium RP-78]
          Length = 1394

 Score =  242 bits (618), Expect = 3e-61
 Identities = 141/380 (37%), Positives = 206/380 (54%), Gaps = 3/380 (0%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            L  +LYGLKQ+GREWN     FL  IGF+  + + C+Y + D+ S +F+   VDD  L  
Sbjct: 1016 LNLALYGLKQSGREWNLLLDEFLRGIGFRASSVDPCVYLRIDEGSPTFLAVHVDDFSLFA 1075

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
              +  M +LK ++ S FE TD G  + +LG E        +L L Q  YI+K+LDRF + 
Sbjct: 1076 KTREIMDKLKGELSSRFEMTDLGPVRQILGYEVIRERDQRTLMLRQAAYIRKVLDRFNMA 1135

Query: 1063 NEKPSEIPMTPNIKFFPATDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFLAQFSS 884
            +  P  +PM PN +    T +    D   YR A+GSLMYAA+ TRPDI++AV  L+QF  
Sbjct: 1136 DSNPVSVPMDPNTR-LQKTPDAPPPDFP-YREAVGSLMYAAVGTRPDISYAVQTLSQFCE 1193

Query: 883  KPSMTHWNAVVKIFCYLKQTKNLGILYNRCNG-AAKIEVTGFTDAGNGTESVSGCSTSGA 707
            +PS  HW A+ ++  YLK T   GI+Y         IEV G++DA  G       S SG 
Sbjct: 1194 RPSTAHWTALKRVLRYLKGTAEWGIIYKAPEAQTTPIEVVGYSDADWGANPDDQKSISGY 1253

Query: 706  VYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFC-PGPANFWI 530
            V++L G  + W S KQ+ + LS ME+E++A   AA   LW R LL +LGF  P P   ++
Sbjct: 1254 VFLLGGAPVCWASRKQKSVALSSMEAEYMAGSTAASQALWCRMLLEELGFAQPNPTLLYM 1313

Query: 529  DNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPKPT 350
            DN +++ +  N  +  RA HI  +Y + + +     + +     + N A + TKPL +  
Sbjct: 1314 DNQSALALARNTGTQGRAKHIDIRYHFLRDKISSKEISVAHCPGEDNPADIFTKPLARQK 1373

Query: 349  FLNHRISMELSE*GGVLRSR 290
            F + R  + +S   G +  R
Sbjct: 1374 FEHFRAMLGMSASRGSVEER 1393


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  237 bits (604), Expect = 1e-59
 Identities = 134/377 (35%), Positives = 216/377 (57%), Gaps = 8/377 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L +SLYGLKQA R W +RF +F++ +G+ R++ +HC Y KR DD     +  +VDD+ ++
Sbjct: 933  LTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVV 992

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               +  ++ LK Q+  EF+  D G    +LG++   + K+  + LSQ  Y+QK+L RF +
Sbjct: 993  GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNM 1052

Query: 1063 NE-KPSEIPMTPNIKF----FPATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905
             +  P   P+  N K      P+++ E + +++R  Y SA+GSLMYA I TRPDIA AV 
Sbjct: 1053 QDYNPISTPLPVNYKLSSSMIPSSEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111

Query: 904  FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725
             +++F + P   HWNAV +I  Y++ T    +    C G ++  + G+ D+    +    
Sbjct: 1112 TVSRFMADPGKEHWNAVKRILRYIRGTSGAAL----CFGGSEFTIRGYVDSDFAGDLDKR 1167

Query: 724  CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545
             ST+G V+ LAGGA+ W+S+ Q  + LS  E+E++A+ +A +  +W + LL +LG     
Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQK 1227

Query: 544  ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365
               + D+ +++ I  NP  H R  HI  QY + ++  E G+V + KI TK N A ++TKP
Sbjct: 1228 ITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKIHTKDNLADVMTKP 1287

Query: 364  LPKPTFLNHRISMELSE 314
            +    F+  R S  L E
Sbjct: 1288 INSDKFIWCRSSYGLLE 1304


>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  233 bits (595), Expect = 1e-58
 Identities = 132/379 (34%), Positives = 215/379 (56%), Gaps = 10/379 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            L+RS+YGLKQA R WN  F   + + GF R   E C+Y K     ++F+  +VDD+ L+ 
Sbjct: 923  LERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASGSIVTFLVLYVDDILLMG 982

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
            +    ++ +K  +   F   D G   ++LGI    + K   + LSQ  Y++K+L RF + 
Sbjct: 983  NDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRFSME 1042

Query: 1063 NEKPSEIPMTPNIKF----FPATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVNF 902
            N K  E+P+  N K      P+TD E +A+++R  Y SA+GS+MYA   TRPD+AFA++ 
Sbjct: 1043 NSKKGELPIQSNAKLSKTQSPSTDEE-IAEMSRVPYASAVGSIMYAMTCTRPDVAFALSM 1101

Query: 901  LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722
            ++++   P   HW AV  I  YL++TKN+ ++     G+  + V G+TDA   T+  SG 
Sbjct: 1102 VSRYQGNPGRAHWIAVKNILKYLRRTKNMVLV---LGGSDTLRVEGYTDASFQTDRDSGR 1158

Query: 721  STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG-- 548
            S SG V++L GGA+ W S KQ  +  S  ESE+IA+ +A++   W+++ + DLG  P   
Sbjct: 1159 SQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKEAAWLKNFIGDLGVVPSIQ 1218

Query: 547  -PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLT 371
             P   + DN  ++ + + P  H ++ HI R+Y + + + E G +++ ++ ++ N A  LT
Sbjct: 1219 EPLELFCDNEGAVALTKEPRDHGKSRHIDRKYHYIRHRVEEGHLLVKRVSSEDNPADPLT 1278

Query: 370  KPLPKPTFLNHRISMELSE 314
            K L +     H  S+ L +
Sbjct: 1279 KALSRIKHNQHARSIGLRD 1297


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  233 bits (595), Expect = 1e-58
 Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 8/377 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D      +  +VDD+ ++
Sbjct: 933  LTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVV 992

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               +  ++ LK Q+  EF+  D G    +LG++   + K+  + LSQ  Y++K+L RF +
Sbjct: 993  GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM 1052

Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905
             + KP   P+  N K      P+ + E + +++R  Y SA+GSLMYA I TRPDIA AV 
Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111

Query: 904  FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725
             +++F + P   HWNAV +I  Y+K T  + +    C G +++ V G+ D+    +    
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVWGYVDSDFAGDHDKR 1167

Query: 724  CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545
             ST+G V+ LAGGA+ W+S+ Q  + LS  E+E++A+ +A +  +W++ L+ +LG     
Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227

Query: 544  ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365
               + D+ +++ I  NP  H R  HI  QY + ++  E G+V + KI T  N A ++TKP
Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKP 1287

Query: 364  LPKPTFLNHRISMELSE 314
            +    F+  R S  L E
Sbjct: 1288 INTDKFVWCRSSYGLLE 1304


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  233 bits (594), Expect = 2e-58
 Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 8/377 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D      +  +VDD+ ++
Sbjct: 933  LTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVV 992

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               +  ++ LK Q+  EF+  D G    +LG++   + K+  + LSQ  Y++K+L RF +
Sbjct: 993  GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNM 1052

Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905
             + KP   P+  N K      P+ + E + +++R  Y SA+GSLMYA I TRPDIA AV 
Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111

Query: 904  FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725
             +++F + P   HWNAV +I  Y+K T  + +    C G +++ V G+ D+    +    
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVRGYVDSDFAGDHDKR 1167

Query: 724  CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545
             ST+G V+ LAGGA+ W+S+ Q  + LS  E+E++A+ +A +  +W++ L+ +LG     
Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227

Query: 544  ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365
               + D+ +++ I  NP  H R  HI  QY + ++  E G+V + KI T  N A ++TKP
Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKP 1287

Query: 364  LPKPTFLNHRISMELSE 314
            +    F+  R S  L E
Sbjct: 1288 INADKFVWCRSSYGLLE 1304


>emb|CCO30980.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 Includes:
            RecName: Full=Protease [Rhizoctonia solani AG-1 IB]
          Length = 742

 Score =  233 bits (593), Expect = 2e-58
 Identities = 134/367 (36%), Positives = 218/367 (59%), Gaps = 7/367 (1%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            L+++LYGLKQA R +  R +  L+ + F R   +H ++ +R+ ++++ I   VDD+ L  
Sbjct: 378  LKKALYGLKQAARAFYLRLREVLVNLRFTRCETDHAVFWRREGENLAIILAHVDDMLLAG 437

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
              +  ++ +K ++   F+  D G P+  +G+E E + K  +L++SQ +YI+ IL RF + 
Sbjct: 438  KPRAYLEDIKAEMAKSFDIVDLGEPQMFVGVEIERDRKAGTLKISQRRYIEDILKRFGME 497

Query: 1063 NEKPSEIPM--TPNIKFFPATDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFLAQF 890
            N KP   PM   PN+   P  D  T+ + T Y+  IGSLMYA I+TR DIA+A   LAQ 
Sbjct: 498  NCKPCVTPMAEVPNL---PKLDAPTV-NRTLYQRGIGSLMYAMISTRGDIAYATGLLAQH 553

Query: 889  SSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCSTSG 710
            ++ P   HW A+ ++  YL+ + NLGI+++R   +   E+ GF DA    +  +  STSG
Sbjct: 554  AANPGEEHWKALQRVLRYLRGSTNLGIIFDRSRPS---ELVGFVDADYAGDPNTSRSTSG 610

Query: 709  AVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP-GPANFW 533
             ++ + GG+I W S KQ  I+LS  E+E++A+  AA+  +W+R  L +LGF   GP   +
Sbjct: 611  WIFKMTGGSIAWSSRKQPTISLSSTEAEYVAAASAARELIWVRGFLSELGFTQNGPTVVY 670

Query: 532  IDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPK- 356
             DN +SM + +NP +H+   HI+ +Y + ++  E+  + L  I T +  A MLTKPL + 
Sbjct: 671  TDNQSSMALSKNPGNHQNTKHIRVKYHFIREMIELKEIELKFIPTDEQIADMLTKPLGRV 730

Query: 355  --PTFLN 341
              PTF++
Sbjct: 731  KFPTFVS 737


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  233 bits (593), Expect = 2e-58
 Identities = 133/371 (35%), Positives = 212/371 (57%), Gaps = 10/371 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            LQ+S+YGLKQA R WN RF   + + GF +  +E C+Y K    ++  +  +VDD+ L+ 
Sbjct: 520  LQKSIYGLKQASRSWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVG 579

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
            +    ++ +K  ++  F   D G   ++LGI    +     + LSQ  YI K+L+RF + 
Sbjct: 580  NDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQ 639

Query: 1063 NEKPSEIPMTPNIKF----FPATDNE--TLADVTRYRSAIGSLMYAAIATRPDIAFAVNF 902
            N K   +PM   I       P T +E   ++D+  Y SAIGS+MYA I TRPD+++A++ 
Sbjct: 640  NSKRGFLPMAHGINLSKNQCPTTTDERDKMSDIP-YASAIGSIMYAMICTRPDVSYALSV 698

Query: 901  LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722
             +++ + PS  HW AV  I  YL++TK++ ++Y    G  ++ V G+TDA   T+     
Sbjct: 699  TSRYQADPSEGHWTAVKNILKYLRRTKDVFLVY---GGDEELVVNGYTDASFQTDKDDYR 755

Query: 721  STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP--- 551
            S SG V+IL GGA+ W S KQ  +  S  E+E+IA+ +AA+ G+WIR+ + +LG  P   
Sbjct: 756  SQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSAS 815

Query: 550  GPANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLT 371
             P + + DN+ ++   + P SH+++ HI R+Y   ++  + G V + K+ T  N A  LT
Sbjct: 816  SPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPLT 875

Query: 370  KPLPKPTFLNH 338
            KPL +P    H
Sbjct: 876  KPLTQPKHEAH 886


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  232 bits (592), Expect = 3e-58
 Identities = 131/377 (34%), Positives = 215/377 (57%), Gaps = 8/377 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D      +  +VDD+ ++
Sbjct: 933  LTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVV 992

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               +  ++ LK Q+  EF+  D G    +LG++   + K+  + LSQ  Y++K+L RF +
Sbjct: 993  GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM 1052

Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905
             + KP   P+  N K      P+ + E + +++R  Y SA+GSLMYA I TRPDIA AV 
Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111

Query: 904  FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725
             +++F + P   HWNAV +I  Y+K T  + +    C G +++ V G+ D+    +    
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVRGYVDSDFAGDHDKR 1167

Query: 724  CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545
             ST+G V+ L GGA+ W+S+ Q  + LS  E+E++A+ +A +  +W++ L+ +LG     
Sbjct: 1168 KSTTGYVFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227

Query: 544  ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365
               + D+ +++ I  NP  H R  HI  QY + ++  E G+V + KI T  N A ++TKP
Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKP 1287

Query: 364  LPKPTFLNHRISMELSE 314
            +    F+  R S  L E
Sbjct: 1288 INADKFVWCRSSYGLLE 1304


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  232 bits (591), Expect = 3e-58
 Identities = 137/379 (36%), Positives = 211/379 (55%), Gaps = 10/379 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            LQRS+YGLKQA R WN  F   +   GF++   E C+Y +     + F+  +VDD+ L+ 
Sbjct: 290  LQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIG 349

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
            +    + ++K+ + S+F+  D G   ++LGI+   + KN  L LSQ  YI K+L +F + 
Sbjct: 350  NDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAAYIDKVLVKFAME 409

Query: 1063 NEKPSEIPMTPNIKF----FPAT--DNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNF 902
            N K   +P    +       P T  D E +  V  Y SA+GSLMYA + TRPDI FAV  
Sbjct: 410  NSKKGNLPSRHGVHLSKEQCPKTPQDEEKMRRVP-YASAVGSLMYAMLCTRPDICFAVGV 468

Query: 901  LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722
            ++++ S P + HW AV  I  YL++T+N  ++Y   +G   I + G+TD+   ++  S  
Sbjct: 469  VSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVY---SGRELIPI-GYTDSDFQSDRDSRK 524

Query: 721  STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG-- 548
            STS AV+ L GGAI W S KQ  +  S ME+E++A+C+AA+  +W+R+ L +L   P   
Sbjct: 525  STSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLREFLKELEVVPNMH 584

Query: 547  -PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLT 371
             P   + DNS ++   + P +H++  HI+R++   ++    G V + KI +  N A   T
Sbjct: 585  EPIRLYCDNSGAVANAKEPRNHRKGKHIERKFHLVREIVSRGDVSVEKIASANNIADPFT 644

Query: 370  KPLPKPTFLNHRISMELSE 314
            K LP  +F  H   M L E
Sbjct: 645  KTLPARSFEQHLEGMGLRE 663


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  231 bits (590), Expect = 5e-58
 Identities = 134/370 (36%), Positives = 210/370 (56%), Gaps = 9/370 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            L RS+YGLKQA R WN RF   + +  F R  +E C+Y K    +++F+  +VDD+ LL 
Sbjct: 587  LHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLG 646

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEIN 1061
            +    ++ +K  + S F   D G   ++LGI    +  N  + LSQ  YI K+L RF ++
Sbjct: 647  NDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMH 706

Query: 1060 E-KPSEIPMTPNIKF----FPAT-DNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFL 899
            + K   IPM+  I       P+T D         Y SAIGS+MYA + TRPD+A A++  
Sbjct: 707  DSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMT 766

Query: 898  AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719
            +++ S P  +HW  V  IF YL++TK+  ++Y    G+ ++ V+G+TDA   T+     S
Sbjct: 767  SRYQSDPGESHWIVVRNIFKYLRRTKDKFLVY---GGSEELVVSGYTDASFQTDKDDFRS 823

Query: 718  TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP---G 548
             SG  + L GGA+ W S KQ  +  S  E+E+IA+ +AA+  +WIR  + +LG  P   G
Sbjct: 824  QSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISG 883

Query: 547  PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368
            P + + DN+ ++   + P+SH+++ HIQR+Y   ++  + G V + ++ T  N A   TK
Sbjct: 884  PIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTK 943

Query: 367  PLPKPTFLNH 338
            PLP+P   +H
Sbjct: 944  PLPQPKHESH 953


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  231 bits (589), Expect = 6e-58
 Identities = 126/345 (36%), Positives = 200/345 (57%), Gaps = 9/345 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            LQ+S+YGLKQA R WN RF   +   GF++   E C+Y K  +  ++F+  +VDD+ L+ 
Sbjct: 950  LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIG 1009

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
            +    +  +K  + ++F+  D G  +++LGI+   N KN +L +SQ  YI K+L R+++ 
Sbjct: 1010 NDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQ 1069

Query: 1063 NEKPSEIPMTPNIKFFPATDNETLADV-----TRYRSAIGSLMYAAIATRPDIAFAVNFL 899
            N K  ++P    I        +T  +V       Y SA+GSLMYA + TRPDI ++V  +
Sbjct: 1070 NSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIV 1129

Query: 898  AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719
            +++ S P   HW AV  I  YL++T+N  ++Y    GA  + +TG+TD+   ++  +  S
Sbjct: 1130 SRYQSNPGRDHWTAVKNILKYLRRTRNYMLVY----GAKDLILTGYTDSDFQSDKDARKS 1185

Query: 718  TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG--- 548
            TSG+V+ L GGA+ W S KQ  I  S ME+E++A+C+AA+  +W+R  L DL   P    
Sbjct: 1186 TSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHL 1245

Query: 547  PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVL 413
            P   + DNS ++   + P SHKR  HI+R+Y   ++    G VV+
Sbjct: 1246 PITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVHRGDVVV 1290


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  231 bits (588), Expect = 8e-58
 Identities = 133/362 (36%), Positives = 210/362 (58%), Gaps = 4/362 (1%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQS-ISFIGFWVDDLYLL 1244
            L +SLYGLKQ+ R+W RRF  F++  G++R   + C+Y    DQ  ++++  +VDD+ + 
Sbjct: 960  LHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIA 1019

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
            +  + +++RLK+ +++EFE  D G  K +LG++   +    +L LSQ +YI+K+L+RFE+
Sbjct: 1020 SKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEM 1079

Query: 1063 NE-KPSEIPMTPNIKFFPATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVNFLAQ 893
             + KP + P+ P  K   AT +E  + +    Y  A+GSLMYA + TR DIA+AV+ +++
Sbjct: 1080 QDCKPVQTPLGPQFKLSAATTSEDESQMNEFPYAQAVGSLMYAMVCTRSDIAYAVSVVSR 1139

Query: 892  FSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCSTS 713
            + S P   HWNAV  I  YLK +   G+LY +   + KIEV GF D+    +     STS
Sbjct: 1140 YLSCPGKVHWNAVKWIMRYLKGSSTCGLLYGKTK-SDKIEVMGFVDSDFAGDLDRRKSTS 1198

Query: 712  GAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGPANFW 533
              +++L    I W S  Q G  LS  E+EFIA+ +A +  +W+R LL +L         +
Sbjct: 1199 RYMFVLNSCLISWKSSLQSGGALSSTEAEFIATTEAVKEAMWLRGLLNELWLNQKIVQVF 1258

Query: 532  IDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPKP 353
             DN  ++ +++N   H+R  HI  +  + + +   GTVV+ KI T  N A  LTK LP  
Sbjct: 1259 CDNQNAIHLVKNQMYHERTKHIDVKLQFIRDEVGKGTVVVSKIHTSVNPADALTKSLPTA 1318

Query: 352  TF 347
             F
Sbjct: 1319 KF 1320


>gb|AAZ28937.1| polyprotein [Phanerochaete chrysosporium RP-78]
          Length = 1338

 Score =  230 bits (587), Expect = 1e-57
 Identities = 141/372 (37%), Positives = 215/372 (57%), Gaps = 4/372 (1%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKI-GFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLL 1244
            L ++LYGLKQAGR WN      L  + G+ R   + CLY K + + ++     VDD  L 
Sbjct: 975  LIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHEGK-LNMALVHVDDTALY 1033

Query: 1243 TSGQRD-MKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFE 1067
              G+R  + R K  +   F  T  G     +G++  +  KN ++ + Q +Y++ IL+RF 
Sbjct: 1034 --GERSILDRFKADVAKHFAITTNGTLSSFVGLQ--VTRKNGAISILQTRYLETILERFG 1089

Query: 1066 INE-KPSEIPMTPNIKFFPATDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFLAQF 890
            + + KP   P+ P +K  P  +++T ADV  Y +AIGSLMYAA  TRPDIAFAV  L+QF
Sbjct: 1090 MQDCKPVSTPLDPGVKLEPTPEDQTPADVP-YAAAIGSLMYAATGTRPDIAFAVQTLSQF 1148

Query: 889  SSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCSTSG 710
            +S+PS THW AV  +F YLK T ++G+ + R    A  ++TG++DA +  ++    S SG
Sbjct: 1149 TSRPSATHWTAVKHVFRYLKGTTDVGLTFAR---RADDDITGYSDA-DWAQAHDRRSVSG 1204

Query: 709  AVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG-PANFW 533
              Y+LAGG + W S+KQ  + LS ME+E+IA   AA+  +W+R LL +LGF PG P    
Sbjct: 1205 YAYLLAGGIVSWNSKKQPTVALSTMEAEYIALSHAAKEAVWLRRLLTELGFPPGAPTVLH 1264

Query: 532  IDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPKP 353
             DN A++    + + H R+ HI  ++ + +++   G + +    +  N A M TK LP+P
Sbjct: 1265 TDNQAAISFAHDTQFHARSKHIDIRHHFIRERITDGDIKVIHCASADNIADMFTKALPRP 1324

Query: 352  TFLNHRISMELS 317
                HR ++ L+
Sbjct: 1325 ---KHRAALALA 1333


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  229 bits (583), Expect = 3e-57
 Identities = 132/374 (35%), Positives = 209/374 (55%), Gaps = 9/374 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            LQ+S+YGLKQA R WN RF   +   GF +  +E C+Y K    +I F+  +VDD+ L+ 
Sbjct: 940  LQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIG 999

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEIN 1061
            +    ++ +K  +++ F   D G   ++LGI    +     + LSQ  YI K+L RF ++
Sbjct: 1000 NDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMH 1059

Query: 1060 E-KPSEIPMTPNIKF----FPAT-DNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFL 899
            + K   +PM+  I       P T D      +  Y SAIGS+MYA + TRPD+++A++  
Sbjct: 1060 DSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSAT 1119

Query: 898  AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719
            +++ S P   HW AV  I  YL++TK++ ++Y    G   + V+G+TDA   T+     S
Sbjct: 1120 SRYQSDPGEGHWTAVKNILKYLRRTKDMFLVY---GGEEDLVVSGYTDASFQTDKDDYRS 1176

Query: 718  TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGF---CPG 548
             SG V+ L GGA+ W S KQ  +  S  E+E+IA+ +AA+  +WI+  + +LG      G
Sbjct: 1177 QSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTG 1236

Query: 547  PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368
            P + + DNS ++   + P SH+++ HI R+Y   ++  + G V + K+ T  N A  LTK
Sbjct: 1237 PMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTK 1296

Query: 367  PLPKPTFLNHRISM 326
            PLP+P    H  +M
Sbjct: 1297 PLPQPKHEAHTRAM 1310


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  229 bits (583), Expect = 3e-57
 Identities = 132/376 (35%), Positives = 213/376 (56%), Gaps = 7/376 (1%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L +SLYGLKQA R W +RF +F++ +G+ R++ +HC Y KR +D     +  +VDD+ + 
Sbjct: 937  LNKSLYGLKQAPRYWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVA 996

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               +  ++ LK Q+  EFE  D G    +LG++   +  N  + LSQ  Y++KIL RF +
Sbjct: 997  GPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKKILRRFNM 1056

Query: 1063 NEKPS---EIPMTPNIKFFPATDNET-LADVTR--YRSAIGSLMYAAIATRPDIAFAVNF 902
             +  S    +P+   +       NE    +++R  Y SA+GSLM+A I TRPDIA AV  
Sbjct: 1057 QDCKSISTSLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGV 1116

Query: 901  LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722
            ++++ + P   HW AV +I  Y++ T ++ +    C G ++  V G+ D+    +     
Sbjct: 1117 VSRYMANPGGEHWIAVKRILRYIRGTSDVAL----CYGGSEFTVRGYVDSDFAGDLDKRK 1172

Query: 721  STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGPA 542
            ST+G V+ LAG A+ W+S+ Q  + LS  E+E++A+ +A +  +WI+ LL +LG      
Sbjct: 1173 STTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAIWIQRLLEELGHKQQKI 1232

Query: 541  NFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPL 362
              + D+ +++ I  NP  H R  HI  QY + ++  E G+V L KI TK+N A +LTKP+
Sbjct: 1233 LVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPI 1292

Query: 361  PKPTFLNHRISMELSE 314
                F+  R S  L+E
Sbjct: 1293 NTDKFVWSRSSCGLAE 1308


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  229 bits (583), Expect = 3e-57
 Identities = 127/367 (34%), Positives = 210/367 (57%), Gaps = 8/367 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D      +  +VDD+ ++
Sbjct: 933  LTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVV 992

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               +  ++ LK Q+  EF+  D G    +LG++   + K+  + LSQ  Y++K+L RF +
Sbjct: 993  GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM 1052

Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905
             + KP   P+  N K      P+ + E + +++R  Y SA+GSLMYA I TRPDIA AV 
Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111

Query: 904  FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725
             +++F + P   HWNAV +I  Y+K T  + +    C G +++ V G+ D+    +    
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVRGYVDSDFAGDHDKR 1167

Query: 724  CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545
             ST+G V+ LAGGA+ W+S+ Q  + LS  E+E++A+ +A +  +W++ L+ +LG     
Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227

Query: 544  ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365
               + D+ +++ I  NP  H R  HI  QY + ++  E G+V + KI T  N A  +TK 
Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADAMTKS 1287

Query: 364  LPKPTFL 344
            +    F+
Sbjct: 1288 INTDKFI 1294


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  228 bits (580), Expect = 7e-57
 Identities = 133/376 (35%), Positives = 213/376 (56%), Gaps = 8/376 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L +SLYGLKQA R W +RF +F++ +G+ R++ +HC Y KR +D     +  +VDD+ + 
Sbjct: 937  LNKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVA 996

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               +  ++ LK Q+  EFE  D G    +LG++   +  N  + LSQ  Y++KIL RF +
Sbjct: 997  GPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNM 1056

Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905
             + K    P+  N K      P+ + E   +++R  Y SA+GSLM+A I TRPDIA AV 
Sbjct: 1057 QDCKSISTPLPVNFKLSSSMCPSNEAER-KEMSRVPYASAVGSLMFAMICTRPDIAQAVG 1115

Query: 904  FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725
             ++++ + P   HW AV +I  Y++ T N+ +    C G ++  V G+ D+    +    
Sbjct: 1116 AVSRYMANPGGEHWIAVKRILRYIRGTSNVAL----CYGGSEFTVRGYVDSDFAGDLDKR 1171

Query: 724  CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545
             ST+G V+ LAG A+ W+S+ Q  + LS  E+E++A+ +A +  +WI+ LL +LG     
Sbjct: 1172 KSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQK 1231

Query: 544  ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365
               + D+ +++ I  NP  H R  HI  QY + ++  E G+V L KI TK+N A +LTK 
Sbjct: 1232 IPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKS 1291

Query: 364  LPKPTFLNHRISMELS 317
            +    F+  R S  L+
Sbjct: 1292 INTDKFVWSRSSCGLA 1307


>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score =  228 bits (580), Expect = 7e-57
 Identities = 135/370 (36%), Positives = 198/370 (53%), Gaps = 9/370 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            L RS+YGLKQA R WN  F   +   GF +   E C+Y K + + + F+  +VDD+ L+ 
Sbjct: 255  LNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDILLIG 314

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
            +    +  +KD +   F+  D G    +LGI+   N K   + LSQ  YI  IL+RF + 
Sbjct: 315  NCIGMLTSVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLSQALYIDTILNRFNMQ 374

Query: 1063 NEKPSEIPMTPNIKFFPATDNETLADV-----TRYRSAIGSLMYAAIATRPDIAFAVNFL 899
              K   +P    I        +T  ++       Y SA+GSLMYA + TRPDI FAV  +
Sbjct: 375  GSKKGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAVGMV 434

Query: 898  AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719
            ++F S     HW AV  I  YLK+T++  +++   N    +   G+TD+   ++  S  S
Sbjct: 435  SRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSEN----LXPIGYTDSDFQSDQDSRKS 490

Query: 718  TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP---G 548
            TSG V+ L GGAI W S KQ  +  S ME+E++A+ +AA+  +W+R+ LLDLG  P    
Sbjct: 491  TSGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQS 550

Query: 547  PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368
            P   + DNS ++   + P SHKRA HI+R+Y   +   + G  V+ KI ++ N A   TK
Sbjct: 551  PITLYCDNSGAVANSKEPRSHKRAKHIERKYHLIRDIVQRGDXVVMKIASENNLADPFTK 610

Query: 367  PLPKPTFLNH 338
             L   TF  H
Sbjct: 611  SLSSXTFERH 620


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  226 bits (576), Expect = 2e-56
 Identities = 126/365 (34%), Positives = 214/365 (58%), Gaps = 7/365 (1%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244
            L++SLYGLKQ+ R+W +RF ++++K+G+ R + + C+Y  R +D S  ++  +VDD+ + 
Sbjct: 937  LKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIA 996

Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064
               + D+++LK  + +EFE  D G  + +LG+E   + +   L LSQ  YIQK+L RF +
Sbjct: 997  AKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGM 1056

Query: 1063 NE-KPSEIPMTPNIK----FFPATDNET-LADVTRYRSAIGSLMYAAIATRPDIAFAVNF 902
            +  KP + P   NI     F P ++ E        Y SA+GSLMYA + TRPD+A AV+ 
Sbjct: 1057 SSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSV 1116

Query: 901  LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722
            +++F  +P   HW AV +IF YL+ T ++G++Y    G  +  VTG++D+    +  +  
Sbjct: 1117 VSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIY---GGDTQCLVTGYSDSDYAGDVDTRR 1173

Query: 721  STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGPA 542
            S +G V+ L G  + W +  Q  +TLS  E+E++A  +AA+ G+W++ L+ DLG     A
Sbjct: 1174 SMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQA 1233

Query: 541  NFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPL 362
              + D+ +++ + ++   H+R  HI  +Y + + +  I    + K+ T  N A M TKP+
Sbjct: 1234 TVYCDSLSAICLAKDQVHHERTKHIDVRYHFLRSEKRI---KVKKVGTADNPADMFTKPV 1290

Query: 361  PKPTF 347
            P+  F
Sbjct: 1291 PQSKF 1295


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  224 bits (572), Expect = 6e-56
 Identities = 129/370 (34%), Positives = 207/370 (55%), Gaps = 9/370 (2%)
 Frame = -2

Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241
            LQ+S+YGLKQA R WN RF   + + GF +  +E C+Y K    ++  +  +VDD+ L+ 
Sbjct: 936  LQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIG 995

Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064
            +    ++ +K  +++ F   D G   ++LGI+   +     + LSQ  YI K+L RF + 
Sbjct: 996  NDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQ 1055

Query: 1063 NEKPSEIPMTPNIKFFPA-----TDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFL 899
            N K   +PM+  I    +     TD     +   Y SAIGS+MYA I TR D+++A++  
Sbjct: 1056 NTKKGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVT 1115

Query: 898  AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719
            +++ + P   HW AV  I  YL++TK+  ++Y    G  ++ V G+TDA   T+     S
Sbjct: 1116 SRYQADPGECHWTAVKNILKYLRRTKDAFLIY---GGDEELVVNGYTDASFQTDKDDYRS 1172

Query: 718  TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP---G 548
             SG V+IL GGA+ W S KQ  +  S  ++E+IA+ +AA+ G+WIR+ + +LG  P    
Sbjct: 1173 QSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASS 1232

Query: 547  PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368
            P + + DN+ ++   + P SH+++ HI R+Y   ++  + G V + KI T  N A  LTK
Sbjct: 1233 PMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVADPLTK 1292

Query: 367  PLPKPTFLNH 338
            PL +P    H
Sbjct: 1293 PLTQPKHEAH 1302


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