BLASTX nr result
ID: Mentha25_contig00042064
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha25_contig00042064 (1421 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAZ28935.1| polyprotein [Phanerochaete chrysosporium RP-78] 242 3e-61 gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 237 1e-59 gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 233 1e-58 gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 233 1e-58 gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 233 2e-58 emb|CCO30980.1| Retrovirus-related Pol polyprotein from transpos... 233 2e-58 gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 233 2e-58 gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 232 3e-58 emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 232 3e-58 gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 231 5e-58 gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 231 6e-58 emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 231 8e-58 gb|AAZ28937.1| polyprotein [Phanerochaete chrysosporium RP-78] 230 1e-57 dbj|BAA22288.1| polyprotein [Oryza australiensis] 229 3e-57 gb|AFB73911.1| polyprotein [Citrus sinensis] 229 3e-57 gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 229 3e-57 gb|AFB73912.1| polyprotein [Citrus sinensis] 228 7e-57 emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 228 7e-57 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 226 2e-56 gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 224 6e-56 >gb|AAZ28935.1| polyprotein [Phanerochaete chrysosporium RP-78] Length = 1394 Score = 242 bits (618), Expect = 3e-61 Identities = 141/380 (37%), Positives = 206/380 (54%), Gaps = 3/380 (0%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 L +LYGLKQ+GREWN FL IGF+ + + C+Y + D+ S +F+ VDD L Sbjct: 1016 LNLALYGLKQSGREWNLLLDEFLRGIGFRASSVDPCVYLRIDEGSPTFLAVHVDDFSLFA 1075 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + M +LK ++ S FE TD G + +LG E +L L Q YI+K+LDRF + Sbjct: 1076 KTREIMDKLKGELSSRFEMTDLGPVRQILGYEVIRERDQRTLMLRQAAYIRKVLDRFNMA 1135 Query: 1063 NEKPSEIPMTPNIKFFPATDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFLAQFSS 884 + P +PM PN + T + D YR A+GSLMYAA+ TRPDI++AV L+QF Sbjct: 1136 DSNPVSVPMDPNTR-LQKTPDAPPPDFP-YREAVGSLMYAAVGTRPDISYAVQTLSQFCE 1193 Query: 883 KPSMTHWNAVVKIFCYLKQTKNLGILYNRCNG-AAKIEVTGFTDAGNGTESVSGCSTSGA 707 +PS HW A+ ++ YLK T GI+Y IEV G++DA G S SG Sbjct: 1194 RPSTAHWTALKRVLRYLKGTAEWGIIYKAPEAQTTPIEVVGYSDADWGANPDDQKSISGY 1253 Query: 706 VYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFC-PGPANFWI 530 V++L G + W S KQ+ + LS ME+E++A AA LW R LL +LGF P P ++ Sbjct: 1254 VFLLGGAPVCWASRKQKSVALSSMEAEYMAGSTAASQALWCRMLLEELGFAQPNPTLLYM 1313 Query: 529 DNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPKPT 350 DN +++ + N + RA HI +Y + + + + + + N A + TKPL + Sbjct: 1314 DNQSALALARNTGTQGRAKHIDIRYHFLRDKISSKEISVAHCPGEDNPADIFTKPLARQK 1373 Query: 349 FLNHRISMELSE*GGVLRSR 290 F + R + +S G + R Sbjct: 1374 FEHFRAMLGMSASRGSVEER 1393 >gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] Length = 1305 Score = 237 bits (604), Expect = 1e-59 Identities = 134/377 (35%), Positives = 216/377 (57%), Gaps = 8/377 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L +SLYGLKQA R W +RF +F++ +G+ R++ +HC Y KR DD + +VDD+ ++ Sbjct: 933 LTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVV 992 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + ++ LK Q+ EF+ D G +LG++ + K+ + LSQ Y+QK+L RF + Sbjct: 993 GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNM 1052 Query: 1063 NE-KPSEIPMTPNIKF----FPATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905 + P P+ N K P+++ E + +++R Y SA+GSLMYA I TRPDIA AV Sbjct: 1053 QDYNPISTPLPVNYKLSSSMIPSSEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111 Query: 904 FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725 +++F + P HWNAV +I Y++ T + C G ++ + G+ D+ + Sbjct: 1112 TVSRFMADPGKEHWNAVKRILRYIRGTSGAAL----CFGGSEFTIRGYVDSDFAGDLDKR 1167 Query: 724 CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545 ST+G V+ LAGGA+ W+S+ Q + LS E+E++A+ +A + +W + LL +LG Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQK 1227 Query: 544 ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365 + D+ +++ I NP H R HI QY + ++ E G+V + KI TK N A ++TKP Sbjct: 1228 ITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKIHTKDNLADVMTKP 1287 Query: 364 LPKPTFLNHRISMELSE 314 + F+ R S L E Sbjct: 1288 INSDKFIWCRSSYGLLE 1304 >gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w] Length = 1303 Score = 233 bits (595), Expect = 1e-58 Identities = 132/379 (34%), Positives = 215/379 (56%), Gaps = 10/379 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 L+RS+YGLKQA R WN F + + GF R E C+Y K ++F+ +VDD+ L+ Sbjct: 923 LERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASGSIVTFLVLYVDDILLMG 982 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + ++ +K + F D G ++LGI + K + LSQ Y++K+L RF + Sbjct: 983 NDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRFSME 1042 Query: 1063 NEKPSEIPMTPNIKF----FPATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVNF 902 N K E+P+ N K P+TD E +A+++R Y SA+GS+MYA TRPD+AFA++ Sbjct: 1043 NSKKGELPIQSNAKLSKTQSPSTDEE-IAEMSRVPYASAVGSIMYAMTCTRPDVAFALSM 1101 Query: 901 LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722 ++++ P HW AV I YL++TKN+ ++ G+ + V G+TDA T+ SG Sbjct: 1102 VSRYQGNPGRAHWIAVKNILKYLRRTKNMVLV---LGGSDTLRVEGYTDASFQTDRDSGR 1158 Query: 721 STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG-- 548 S SG V++L GGA+ W S KQ + S ESE+IA+ +A++ W+++ + DLG P Sbjct: 1159 SQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKEAAWLKNFIGDLGVVPSIQ 1218 Query: 547 -PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLT 371 P + DN ++ + + P H ++ HI R+Y + + + E G +++ ++ ++ N A LT Sbjct: 1219 EPLELFCDNEGAVALTKEPRDHGKSRHIDRKYHYIRHRVEEGHLLVKRVSSEDNPADPLT 1278 Query: 370 KPLPKPTFLNHRISMELSE 314 K L + H S+ L + Sbjct: 1279 KALSRIKHNQHARSIGLRD 1297 >gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 233 bits (595), Expect = 1e-58 Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 8/377 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D + +VDD+ ++ Sbjct: 933 LTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVV 992 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + ++ LK Q+ EF+ D G +LG++ + K+ + LSQ Y++K+L RF + Sbjct: 993 GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM 1052 Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905 + KP P+ N K P+ + E + +++R Y SA+GSLMYA I TRPDIA AV Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111 Query: 904 FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725 +++F + P HWNAV +I Y+K T + + C G +++ V G+ D+ + Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVWGYVDSDFAGDHDKR 1167 Query: 724 CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545 ST+G V+ LAGGA+ W+S+ Q + LS E+E++A+ +A + +W++ L+ +LG Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227 Query: 544 ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365 + D+ +++ I NP H R HI QY + ++ E G+V + KI T N A ++TKP Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKP 1287 Query: 364 LPKPTFLNHRISMELSE 314 + F+ R S L E Sbjct: 1288 INTDKFVWCRSSYGLLE 1304 >gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 233 bits (594), Expect = 2e-58 Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 8/377 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D + +VDD+ ++ Sbjct: 933 LTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVV 992 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + ++ LK Q+ EF+ D G +LG++ + K+ + LSQ Y++K+L RF + Sbjct: 993 GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNM 1052 Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905 + KP P+ N K P+ + E + +++R Y SA+GSLMYA I TRPDIA AV Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111 Query: 904 FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725 +++F + P HWNAV +I Y+K T + + C G +++ V G+ D+ + Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVRGYVDSDFAGDHDKR 1167 Query: 724 CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545 ST+G V+ LAGGA+ W+S+ Q + LS E+E++A+ +A + +W++ L+ +LG Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227 Query: 544 ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365 + D+ +++ I NP H R HI QY + ++ E G+V + KI T N A ++TKP Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKP 1287 Query: 364 LPKPTFLNHRISMELSE 314 + F+ R S L E Sbjct: 1288 INADKFVWCRSSYGLLE 1304 >emb|CCO30980.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 Includes: RecName: Full=Protease [Rhizoctonia solani AG-1 IB] Length = 742 Score = 233 bits (593), Expect = 2e-58 Identities = 134/367 (36%), Positives = 218/367 (59%), Gaps = 7/367 (1%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 L+++LYGLKQA R + R + L+ + F R +H ++ +R+ ++++ I VDD+ L Sbjct: 378 LKKALYGLKQAARAFYLRLREVLVNLRFTRCETDHAVFWRREGENLAIILAHVDDMLLAG 437 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + ++ +K ++ F+ D G P+ +G+E E + K +L++SQ +YI+ IL RF + Sbjct: 438 KPRAYLEDIKAEMAKSFDIVDLGEPQMFVGVEIERDRKAGTLKISQRRYIEDILKRFGME 497 Query: 1063 NEKPSEIPM--TPNIKFFPATDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFLAQF 890 N KP PM PN+ P D T+ + T Y+ IGSLMYA I+TR DIA+A LAQ Sbjct: 498 NCKPCVTPMAEVPNL---PKLDAPTV-NRTLYQRGIGSLMYAMISTRGDIAYATGLLAQH 553 Query: 889 SSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCSTSG 710 ++ P HW A+ ++ YL+ + NLGI+++R + E+ GF DA + + STSG Sbjct: 554 AANPGEEHWKALQRVLRYLRGSTNLGIIFDRSRPS---ELVGFVDADYAGDPNTSRSTSG 610 Query: 709 AVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP-GPANFW 533 ++ + GG+I W S KQ I+LS E+E++A+ AA+ +W+R L +LGF GP + Sbjct: 611 WIFKMTGGSIAWSSRKQPTISLSSTEAEYVAAASAARELIWVRGFLSELGFTQNGPTVVY 670 Query: 532 IDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPK- 356 DN +SM + +NP +H+ HI+ +Y + ++ E+ + L I T + A MLTKPL + Sbjct: 671 TDNQSSMALSKNPGNHQNTKHIRVKYHFIREMIELKEIELKFIPTDEQIADMLTKPLGRV 730 Query: 355 --PTFLN 341 PTF++ Sbjct: 731 KFPTFVS 737 >gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis] Length = 896 Score = 233 bits (593), Expect = 2e-58 Identities = 133/371 (35%), Positives = 212/371 (57%), Gaps = 10/371 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 LQ+S+YGLKQA R WN RF + + GF + +E C+Y K ++ + +VDD+ L+ Sbjct: 520 LQKSIYGLKQASRSWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVG 579 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + ++ +K ++ F D G ++LGI + + LSQ YI K+L+RF + Sbjct: 580 NDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQ 639 Query: 1063 NEKPSEIPMTPNIKF----FPATDNE--TLADVTRYRSAIGSLMYAAIATRPDIAFAVNF 902 N K +PM I P T +E ++D+ Y SAIGS+MYA I TRPD+++A++ Sbjct: 640 NSKRGFLPMAHGINLSKNQCPTTTDERDKMSDIP-YASAIGSIMYAMICTRPDVSYALSV 698 Query: 901 LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722 +++ + PS HW AV I YL++TK++ ++Y G ++ V G+TDA T+ Sbjct: 699 TSRYQADPSEGHWTAVKNILKYLRRTKDVFLVY---GGDEELVVNGYTDASFQTDKDDYR 755 Query: 721 STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP--- 551 S SG V+IL GGA+ W S KQ + S E+E+IA+ +AA+ G+WIR+ + +LG P Sbjct: 756 SQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSAS 815 Query: 550 GPANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLT 371 P + + DN+ ++ + P SH+++ HI R+Y ++ + G V + K+ T N A LT Sbjct: 816 SPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPLT 875 Query: 370 KPLPKPTFLNH 338 KPL +P H Sbjct: 876 KPLTQPKHEAH 886 >gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 232 bits (592), Expect = 3e-58 Identities = 131/377 (34%), Positives = 215/377 (57%), Gaps = 8/377 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D + +VDD+ ++ Sbjct: 933 LTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVV 992 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + ++ LK Q+ EF+ D G +LG++ + K+ + LSQ Y++K+L RF + Sbjct: 993 GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM 1052 Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905 + KP P+ N K P+ + E + +++R Y SA+GSLMYA I TRPDIA AV Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111 Query: 904 FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725 +++F + P HWNAV +I Y+K T + + C G +++ V G+ D+ + Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVRGYVDSDFAGDHDKR 1167 Query: 724 CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545 ST+G V+ L GGA+ W+S+ Q + LS E+E++A+ +A + +W++ L+ +LG Sbjct: 1168 KSTTGYVFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227 Query: 544 ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365 + D+ +++ I NP H R HI QY + ++ E G+V + KI T N A ++TKP Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKP 1287 Query: 364 LPKPTFLNHRISMELSE 314 + F+ R S L E Sbjct: 1288 INADKFVWCRSSYGLLE 1304 >emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] Length = 668 Score = 232 bits (591), Expect = 3e-58 Identities = 137/379 (36%), Positives = 211/379 (55%), Gaps = 10/379 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 LQRS+YGLKQA R WN F + GF++ E C+Y + + F+ +VDD+ L+ Sbjct: 290 LQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIG 349 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + + ++K+ + S+F+ D G ++LGI+ + KN L LSQ YI K+L +F + Sbjct: 350 NDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAAYIDKVLVKFAME 409 Query: 1063 NEKPSEIPMTPNIKF----FPAT--DNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNF 902 N K +P + P T D E + V Y SA+GSLMYA + TRPDI FAV Sbjct: 410 NSKKGNLPSRHGVHLSKEQCPKTPQDEEKMRRVP-YASAVGSLMYAMLCTRPDICFAVGV 468 Query: 901 LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722 ++++ S P + HW AV I YL++T+N ++Y +G I + G+TD+ ++ S Sbjct: 469 VSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVY---SGRELIPI-GYTDSDFQSDRDSRK 524 Query: 721 STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG-- 548 STS AV+ L GGAI W S KQ + S ME+E++A+C+AA+ +W+R+ L +L P Sbjct: 525 STSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLREFLKELEVVPNMH 584 Query: 547 -PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLT 371 P + DNS ++ + P +H++ HI+R++ ++ G V + KI + N A T Sbjct: 585 EPIRLYCDNSGAVANAKEPRNHRKGKHIERKFHLVREIVSRGDVSVEKIASANNIADPFT 644 Query: 370 KPLPKPTFLNHRISMELSE 314 K LP +F H M L E Sbjct: 645 KTLPARSFEQHLEGMGLRE 663 >gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana] Length = 964 Score = 231 bits (590), Expect = 5e-58 Identities = 134/370 (36%), Positives = 210/370 (56%), Gaps = 9/370 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 L RS+YGLKQA R WN RF + + F R +E C+Y K +++F+ +VDD+ LL Sbjct: 587 LHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLG 646 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEIN 1061 + ++ +K + S F D G ++LGI + N + LSQ YI K+L RF ++ Sbjct: 647 NDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMH 706 Query: 1060 E-KPSEIPMTPNIKF----FPAT-DNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFL 899 + K IPM+ I P+T D Y SAIGS+MYA + TRPD+A A++ Sbjct: 707 DSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMT 766 Query: 898 AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719 +++ S P +HW V IF YL++TK+ ++Y G+ ++ V+G+TDA T+ S Sbjct: 767 SRYQSDPGESHWIVVRNIFKYLRRTKDKFLVY---GGSEELVVSGYTDASFQTDKDDFRS 823 Query: 718 TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP---G 548 SG + L GGA+ W S KQ + S E+E+IA+ +AA+ +WIR + +LG P G Sbjct: 824 QSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISG 883 Query: 547 PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368 P + + DN+ ++ + P+SH+++ HIQR+Y ++ + G V + ++ T N A TK Sbjct: 884 PIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTK 943 Query: 367 PLPKPTFLNH 338 PLP+P +H Sbjct: 944 PLPQPKHESH 953 >gb|ADJ18449.1| gag/pol protein [Bryonia dioica] Length = 1292 Score = 231 bits (589), Expect = 6e-58 Identities = 126/345 (36%), Positives = 200/345 (57%), Gaps = 9/345 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 LQ+S+YGLKQA R WN RF + GF++ E C+Y K + ++F+ +VDD+ L+ Sbjct: 950 LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIG 1009 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + + +K + ++F+ D G +++LGI+ N KN +L +SQ YI K+L R+++ Sbjct: 1010 NDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQ 1069 Query: 1063 NEKPSEIPMTPNIKFFPATDNETLADV-----TRYRSAIGSLMYAAIATRPDIAFAVNFL 899 N K ++P I +T +V Y SA+GSLMYA + TRPDI ++V + Sbjct: 1070 NSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIV 1129 Query: 898 AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719 +++ S P HW AV I YL++T+N ++Y GA + +TG+TD+ ++ + S Sbjct: 1130 SRYQSNPGRDHWTAVKNILKYLRRTRNYMLVY----GAKDLILTGYTDSDFQSDKDARKS 1185 Query: 718 TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG--- 548 TSG+V+ L GGA+ W S KQ I S ME+E++A+C+AA+ +W+R L DL P Sbjct: 1186 TSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHL 1245 Query: 547 PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVL 413 P + DNS ++ + P SHKR HI+R+Y ++ G VV+ Sbjct: 1246 PITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVHRGDVVV 1290 >emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] Length = 1334 Score = 231 bits (588), Expect = 8e-58 Identities = 133/362 (36%), Positives = 210/362 (58%), Gaps = 4/362 (1%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQS-ISFIGFWVDDLYLL 1244 L +SLYGLKQ+ R+W RRF F++ G++R + C+Y DQ ++++ +VDD+ + Sbjct: 960 LHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIA 1019 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + + +++RLK+ +++EFE D G K +LG++ + +L LSQ +YI+K+L+RFE+ Sbjct: 1020 SKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEM 1079 Query: 1063 NE-KPSEIPMTPNIKFFPATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVNFLAQ 893 + KP + P+ P K AT +E + + Y A+GSLMYA + TR DIA+AV+ +++ Sbjct: 1080 QDCKPVQTPLGPQFKLSAATTSEDESQMNEFPYAQAVGSLMYAMVCTRSDIAYAVSVVSR 1139 Query: 892 FSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCSTS 713 + S P HWNAV I YLK + G+LY + + KIEV GF D+ + STS Sbjct: 1140 YLSCPGKVHWNAVKWIMRYLKGSSTCGLLYGKTK-SDKIEVMGFVDSDFAGDLDRRKSTS 1198 Query: 712 GAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGPANFW 533 +++L I W S Q G LS E+EFIA+ +A + +W+R LL +L + Sbjct: 1199 RYMFVLNSCLISWKSSLQSGGALSSTEAEFIATTEAVKEAMWLRGLLNELWLNQKIVQVF 1258 Query: 532 IDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPKP 353 DN ++ +++N H+R HI + + + + GTVV+ KI T N A LTK LP Sbjct: 1259 CDNQNAIHLVKNQMYHERTKHIDVKLQFIRDEVGKGTVVVSKIHTSVNPADALTKSLPTA 1318 Query: 352 TF 347 F Sbjct: 1319 KF 1320 >gb|AAZ28937.1| polyprotein [Phanerochaete chrysosporium RP-78] Length = 1338 Score = 230 bits (587), Expect = 1e-57 Identities = 141/372 (37%), Positives = 215/372 (57%), Gaps = 4/372 (1%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKI-GFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLL 1244 L ++LYGLKQAGR WN L + G+ R + CLY K + + ++ VDD L Sbjct: 975 LIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHEGK-LNMALVHVDDTALY 1033 Query: 1243 TSGQRD-MKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFE 1067 G+R + R K + F T G +G++ + KN ++ + Q +Y++ IL+RF Sbjct: 1034 --GERSILDRFKADVAKHFAITTNGTLSSFVGLQ--VTRKNGAISILQTRYLETILERFG 1089 Query: 1066 INE-KPSEIPMTPNIKFFPATDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFLAQF 890 + + KP P+ P +K P +++T ADV Y +AIGSLMYAA TRPDIAFAV L+QF Sbjct: 1090 MQDCKPVSTPLDPGVKLEPTPEDQTPADVP-YAAAIGSLMYAATGTRPDIAFAVQTLSQF 1148 Query: 889 SSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCSTSG 710 +S+PS THW AV +F YLK T ++G+ + R A ++TG++DA + ++ S SG Sbjct: 1149 TSRPSATHWTAVKHVFRYLKGTTDVGLTFAR---RADDDITGYSDA-DWAQAHDRRSVSG 1204 Query: 709 AVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPG-PANFW 533 Y+LAGG + W S+KQ + LS ME+E+IA AA+ +W+R LL +LGF PG P Sbjct: 1205 YAYLLAGGIVSWNSKKQPTVALSTMEAEYIALSHAAKEAVWLRRLLTELGFPPGAPTVLH 1264 Query: 532 IDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPLPKP 353 DN A++ + + H R+ HI ++ + +++ G + + + N A M TK LP+P Sbjct: 1265 TDNQAAISFAHDTQFHARSKHIDIRHHFIRERITDGDIKVIHCASADNIADMFTKALPRP 1324 Query: 352 TFLNHRISMELS 317 HR ++ L+ Sbjct: 1325 ---KHRAALALA 1333 >dbj|BAA22288.1| polyprotein [Oryza australiensis] Length = 1317 Score = 229 bits (583), Expect = 3e-57 Identities = 132/374 (35%), Positives = 209/374 (55%), Gaps = 9/374 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 LQ+S+YGLKQA R WN RF + GF + +E C+Y K +I F+ +VDD+ L+ Sbjct: 940 LQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIG 999 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEIN 1061 + ++ +K +++ F D G ++LGI + + LSQ YI K+L RF ++ Sbjct: 1000 NDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMH 1059 Query: 1060 E-KPSEIPMTPNIKF----FPAT-DNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFL 899 + K +PM+ I P T D + Y SAIGS+MYA + TRPD+++A++ Sbjct: 1060 DSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSAT 1119 Query: 898 AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719 +++ S P HW AV I YL++TK++ ++Y G + V+G+TDA T+ S Sbjct: 1120 SRYQSDPGEGHWTAVKNILKYLRRTKDMFLVY---GGEEDLVVSGYTDASFQTDKDDYRS 1176 Query: 718 TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGF---CPG 548 SG V+ L GGA+ W S KQ + S E+E+IA+ +AA+ +WI+ + +LG G Sbjct: 1177 QSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTG 1236 Query: 547 PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368 P + + DNS ++ + P SH+++ HI R+Y ++ + G V + K+ T N A LTK Sbjct: 1237 PMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTK 1296 Query: 367 PLPKPTFLNHRISM 326 PLP+P H +M Sbjct: 1297 PLPQPKHEAHTRAM 1310 >gb|AFB73911.1| polyprotein [Citrus sinensis] Length = 1309 Score = 229 bits (583), Expect = 3e-57 Identities = 132/376 (35%), Positives = 213/376 (56%), Gaps = 7/376 (1%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L +SLYGLKQA R W +RF +F++ +G+ R++ +HC Y KR +D + +VDD+ + Sbjct: 937 LNKSLYGLKQAPRYWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVA 996 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + ++ LK Q+ EFE D G +LG++ + N + LSQ Y++KIL RF + Sbjct: 997 GPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKKILRRFNM 1056 Query: 1063 NEKPS---EIPMTPNIKFFPATDNET-LADVTR--YRSAIGSLMYAAIATRPDIAFAVNF 902 + S +P+ + NE +++R Y SA+GSLM+A I TRPDIA AV Sbjct: 1057 QDCKSISTSLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGV 1116 Query: 901 LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722 ++++ + P HW AV +I Y++ T ++ + C G ++ V G+ D+ + Sbjct: 1117 VSRYMANPGGEHWIAVKRILRYIRGTSDVAL----CYGGSEFTVRGYVDSDFAGDLDKRK 1172 Query: 721 STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGPA 542 ST+G V+ LAG A+ W+S+ Q + LS E+E++A+ +A + +WI+ LL +LG Sbjct: 1173 STTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAIWIQRLLEELGHKQQKI 1232 Query: 541 NFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPL 362 + D+ +++ I NP H R HI QY + ++ E G+V L KI TK+N A +LTKP+ Sbjct: 1233 LVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPI 1292 Query: 361 PKPTFLNHRISMELSE 314 F+ R S L+E Sbjct: 1293 NTDKFVWSRSSCGLAE 1308 >gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 229 bits (583), Expect = 3e-57 Identities = 127/367 (34%), Positives = 210/367 (57%), Gaps = 8/367 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L +SLYGLKQA R W +RF +F++ + + R++ +HC Y KR D + +VDD+ ++ Sbjct: 933 LTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVV 992 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + ++ LK Q+ EF+ D G +LG++ + K+ + LSQ Y++K+L RF + Sbjct: 993 GPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM 1052 Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905 + KP P+ N K P+ + E + +++R Y SA+GSLMYA I TRPDIA AV Sbjct: 1053 QDCKPISTPLPVNFKLSSGMSPSNEAERM-EMSRVPYASAVGSLMYAMICTRPDIAQAVG 1111 Query: 904 FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725 +++F + P HWNAV +I Y+K T + + C G +++ V G+ D+ + Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV----CFGGSELTVRGYVDSDFAGDHDKR 1167 Query: 724 CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545 ST+G V+ LAGGA+ W+S+ Q + LS E+E++A+ +A + +W++ L+ +LG Sbjct: 1168 KSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQ 1227 Query: 544 ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365 + D+ +++ I NP H R HI QY + ++ E G+V + KI T N A +TK Sbjct: 1228 ITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADAMTKS 1287 Query: 364 LPKPTFL 344 + F+ Sbjct: 1288 INTDKFI 1294 >gb|AFB73912.1| polyprotein [Citrus sinensis] Length = 1309 Score = 228 bits (580), Expect = 7e-57 Identities = 133/376 (35%), Positives = 213/376 (56%), Gaps = 8/376 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L +SLYGLKQA R W +RF +F++ +G+ R++ +HC Y KR +D + +VDD+ + Sbjct: 937 LNKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVA 996 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + ++ LK Q+ EFE D G +LG++ + N + LSQ Y++KIL RF + Sbjct: 997 GPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNM 1056 Query: 1063 NE-KPSEIPMTPNIKFF----PATDNETLADVTR--YRSAIGSLMYAAIATRPDIAFAVN 905 + K P+ N K P+ + E +++R Y SA+GSLM+A I TRPDIA AV Sbjct: 1057 QDCKSISTPLPVNFKLSSSMCPSNEAER-KEMSRVPYASAVGSLMFAMICTRPDIAQAVG 1115 Query: 904 FLAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSG 725 ++++ + P HW AV +I Y++ T N+ + C G ++ V G+ D+ + Sbjct: 1116 AVSRYMANPGGEHWIAVKRILRYIRGTSNVAL----CYGGSEFTVRGYVDSDFAGDLDKR 1171 Query: 724 CSTSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGP 545 ST+G V+ LAG A+ W+S+ Q + LS E+E++A+ +A + +WI+ LL +LG Sbjct: 1172 KSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQK 1231 Query: 544 ANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKP 365 + D+ +++ I NP H R HI QY + ++ E G+V L KI TK+N A +LTK Sbjct: 1232 IPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKS 1291 Query: 364 LPKPTFLNHRISMELS 317 + F+ R S L+ Sbjct: 1292 INTDKFVWSRSSCGLA 1307 >emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] Length = 633 Score = 228 bits (580), Expect = 7e-57 Identities = 135/370 (36%), Positives = 198/370 (53%), Gaps = 9/370 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 L RS+YGLKQA R WN F + GF + E C+Y K + + + F+ +VDD+ L+ Sbjct: 255 LNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDILLIG 314 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + + +KD + F+ D G +LGI+ N K + LSQ YI IL+RF + Sbjct: 315 NCIGMLTSVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLSQALYIDTILNRFNMQ 374 Query: 1063 NEKPSEIPMTPNIKFFPATDNETLADV-----TRYRSAIGSLMYAAIATRPDIAFAVNFL 899 K +P I +T ++ Y SA+GSLMYA + TRPDI FAV + Sbjct: 375 GSKKGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAVGMV 434 Query: 898 AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719 ++F S HW AV I YLK+T++ +++ N + G+TD+ ++ S S Sbjct: 435 SRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSEN----LXPIGYTDSDFQSDQDSRKS 490 Query: 718 TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP---G 548 TSG V+ L GGAI W S KQ + S ME+E++A+ +AA+ +W+R+ LLDLG P Sbjct: 491 TSGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQS 550 Query: 547 PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368 P + DNS ++ + P SHKRA HI+R+Y + + G V+ KI ++ N A TK Sbjct: 551 PITLYCDNSGAVANSKEPRSHKRAKHIERKYHLIRDIVQRGDXVVMKIASENNLADPFTK 610 Query: 367 PLPKPTFLNH 338 L TF H Sbjct: 611 SLSSXTFERH 620 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 226 bits (576), Expect = 2e-56 Identities = 126/365 (34%), Positives = 214/365 (58%), Gaps = 7/365 (1%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKR-DDQSISFIGFWVDDLYLL 1244 L++SLYGLKQ+ R+W +RF ++++K+G+ R + + C+Y R +D S ++ +VDD+ + Sbjct: 937 LKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIA 996 Query: 1243 TSGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI 1064 + D+++LK + +EFE D G + +LG+E + + L LSQ YIQK+L RF + Sbjct: 997 AKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGM 1056 Query: 1063 NE-KPSEIPMTPNIK----FFPATDNET-LADVTRYRSAIGSLMYAAIATRPDIAFAVNF 902 + KP + P NI F P ++ E Y SA+GSLMYA + TRPD+A AV+ Sbjct: 1057 SSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSV 1116 Query: 901 LAQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGC 722 +++F +P HW AV +IF YL+ T ++G++Y G + VTG++D+ + + Sbjct: 1117 VSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIY---GGDTQCLVTGYSDSDYAGDVDTRR 1173 Query: 721 STSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCPGPA 542 S +G V+ L G + W + Q +TLS E+E++A +AA+ G+W++ L+ DLG A Sbjct: 1174 SMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQA 1233 Query: 541 NFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTKPL 362 + D+ +++ + ++ H+R HI +Y + + + I + K+ T N A M TKP+ Sbjct: 1234 TVYCDSLSAICLAKDQVHHERTKHIDVRYHFLRSEKRI---KVKKVGTADNPADMFTKPV 1290 Query: 361 PKPTF 347 P+ F Sbjct: 1291 PQSKF 1295 >gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis] Length = 1313 Score = 224 bits (572), Expect = 6e-56 Identities = 129/370 (34%), Positives = 207/370 (55%), Gaps = 9/370 (2%) Frame = -2 Query: 1420 LQRSLYGLKQAGREWNRRFKAFLLKIGFKRVTKEHCLYSKRDDQSISFIGFWVDDLYLLT 1241 LQ+S+YGLKQA R WN RF + + GF + +E C+Y K ++ + +VDD+ L+ Sbjct: 936 LQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIG 995 Query: 1240 SGQRDMKRLKDQIQSEFEATDQGIPKFMLGIEFEINLKNNSLRLSQMQYIQKILDRFEI- 1064 + ++ +K +++ F D G ++LGI+ + + LSQ YI K+L RF + Sbjct: 996 NDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQ 1055 Query: 1063 NEKPSEIPMTPNIKFFPA-----TDNETLADVTRYRSAIGSLMYAAIATRPDIAFAVNFL 899 N K +PM+ I + TD + Y SAIGS+MYA I TR D+++A++ Sbjct: 1056 NTKKGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVT 1115 Query: 898 AQFSSKPSMTHWNAVVKIFCYLKQTKNLGILYNRCNGAAKIEVTGFTDAGNGTESVSGCS 719 +++ + P HW AV I YL++TK+ ++Y G ++ V G+TDA T+ S Sbjct: 1116 SRYQADPGECHWTAVKNILKYLRRTKDAFLIY---GGDEELVVNGYTDASFQTDKDDYRS 1172 Query: 718 TSGAVYILAGGAIKWISEKQRGITLSEMESEFIASCKAAQSGLWIRDLLLDLGFCP---G 548 SG V+IL GGA+ W S KQ + S ++E+IA+ +AA+ G+WIR+ + +LG P Sbjct: 1173 QSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASS 1232 Query: 547 PANFWIDNSASMRIIENPESHKRALHIQRQYFWTQQQCEIGTVVLHKIETKKNAAYMLTK 368 P + + DN+ ++ + P SH+++ HI R+Y ++ + G V + KI T N A LTK Sbjct: 1233 PMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVADPLTK 1292 Query: 367 PLPKPTFLNH 338 PL +P H Sbjct: 1293 PLTQPKHEAH 1302