BLASTX nr result

ID: Mentha25_contig00034896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00034896
         (700 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU41838.1| hypothetical protein MIMGU_mgv1a020202mg, partial...   123   5e-26
ref|XP_006363058.1| PREDICTED: AT-rich interactive domain-contai...    80   9e-13
ref|XP_004246341.1| PREDICTED: uncharacterized protein LOC101253...    79   2e-12

>gb|EYU41838.1| hypothetical protein MIMGU_mgv1a020202mg, partial [Mimulus
           guttatus]
          Length = 424

 Score =  123 bits (309), Expect = 5e-26
 Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
 Frame = +1

Query: 85  SKGVEDVKCSSPFGRYSEEEMVTKLKGIAVDPCMPQYAPDNIKLLWNQILGLRKLMVLED 264
           SKG+EDV+ +S FGR+SE EM+ +LK +A+DP   Q+  D+I+ L NQIL +RK+M+L+D
Sbjct: 2   SKGIEDVQHNSVFGRFSEGEMIAQLKRLALDPDGEQFESDDIQPLMNQILRIRKIMLLKD 61

Query: 265 SEMPWRKRKLEQLV-KDKQKSPTGFVSLNRQSITKHRRKQXXXXXXXXXXXXXVDSAQSR 441
           SE+PW+KRKLEQ + KD   +P+  V  N+QSI K  R+Q             VDS Q  
Sbjct: 62  SEIPWKKRKLEQFIKKDALIAPSALVLPNQQSIAKLTRRQLSHASSLSCLLNSVDSTQCL 121

Query: 442 DEKFIIESHTSGSLVTFDQALPEKPVTTEXXXXXRTQLL 558
           + K I  SHTS +   FD  L EK  + +      T+ L
Sbjct: 122 ESKLIFHSHTSSTSSAFDD-LSEKDASDDCSFLDNTEFL 159


>ref|XP_006363058.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
           isoform X1 [Solanum tuberosum]
           gi|565394830|ref|XP_006363059.1| PREDICTED: AT-rich
           interactive domain-containing protein 2-like isoform X2
           [Solanum tuberosum]
          Length = 452

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +1

Query: 94  VEDVKCSSPFGRYSEEEMVTKLKGIAVDPCMPQYAPDNIKLLWNQILGLRKLMVLEDSEM 273
           V + K    FGRYS+ EM+  LK +A+DPC         K LWNQ+L +R  M L D+++
Sbjct: 14  VTEEKGKLVFGRYSDAEMLALLKRLALDPC-DSVTHQKAKPLWNQMLRVRDAMTLSDNDI 72

Query: 274 PWRKRKLEQLVKDKQKSP-TGFVSLNRQSITKHRRKQXXXXXXXXXXXXXVDSAQSRDEK 450
            WRKRKL+Q VKD+ +SP       N++S +K  R+                SA+S  +K
Sbjct: 73  SWRKRKLQQFVKDQLRSPELPAEKSNQKSASKLSRRHISHASSISCLLDSGKSAKSSGQK 132

Query: 451 FIIESHTSGSLVT 489
             + S+++ S +T
Sbjct: 133 VFLSSYSARSSLT 145


>ref|XP_004246341.1| PREDICTED: uncharacterized protein LOC101253925 [Solanum
           lycopersicum]
          Length = 452

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
 Frame = +1

Query: 121 FGRYSEEEMVTKLKGIAVDPCMPQYAPDNIKLLWNQILGLRKLMVLEDSEMPWRKRKLEQ 300
           FGRYS+ E++ +LK +A+DPC           LWNQ+L +R+ M L DS++ WRKRKL Q
Sbjct: 23  FGRYSDAEVLARLKRLALDPC-DSVTHQKATPLWNQMLKVREAMTLSDSDISWRKRKLRQ 81

Query: 301 LVKDKQKSP-TGFVSLNRQSITKHRRKQXXXXXXXXXXXXXVDSAQSRDEKFIIESHTSG 477
            VKD+ +SP       N++  +K  R+               +SA+S  +K  + SH++ 
Sbjct: 82  FVKDQLRSPGLPAEKSNQKRASKQSRRHISHASSISCLLDSGNSAKSSGQKVFLSSHSAC 141

Query: 478 S 480
           S
Sbjct: 142 S 142


Top