BLASTX nr result
ID: Mentha25_contig00034636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00034636
(748 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 261 2e-67
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 253 7e-65
gb|AGQ44775.1| general transcription factor [Camellia sinensis] 250 3e-64
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus... 248 1e-63
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 247 3e-63
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 226 9e-57
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 226 9e-57
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 225 1e-56
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc... 224 2e-56
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 221 2e-55
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 209 6e-52
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc... 209 8e-52
ref|XP_002310512.2| transcription factor-related family protein ... 206 9e-51
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun... 206 9e-51
ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc... 203 6e-50
ref|XP_003591640.1| General transcription factor IIH subunit [Me... 202 8e-50
gb|ABE86684.1| general transcription factor IIH component, relat... 202 8e-50
ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phas... 202 1e-49
ref|XP_002307021.1| transcription factor-related family protein ... 199 1e-48
ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transc... 197 3e-48
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Vitis vinifera]
gi|296090002|emb|CBI39821.3| unnamed protein product
[Vitis vinifera]
Length = 602
Score = 261 bits (667), Expect = 2e-67
Identities = 130/187 (69%), Positives = 154/187 (82%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANALK LGDT + +K ++ S+S +AY SLR I +IK +GL +PI+ DIALKVLNG
Sbjct: 416 QQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNG 475
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LTQ+ISSTKFHLG +P ESVLD LP +TK ELL HWT +QE L+HFWSSYPITT +LY K
Sbjct: 476 LTQNISSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTK 535
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
R++D MS+IYPKLQE+KESVQSDFRHQVSLLV PMLQALDAAFAHYDAD QKR+++SG
Sbjct: 536 ASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSG 595
Query: 541 TRHNGLM 561
R NG +
Sbjct: 596 ERPNGFV 602
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum tuberosum]
Length = 599
Score = 253 bits (645), Expect = 7e-65
Identities = 124/187 (66%), Positives = 154/187 (82%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+KALGD + + L+ SVS +A+ SL+++I +I GL EPI++ ++ALKV NG
Sbjct: 413 QQANAIKALGDAETGIRQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNG 472
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
L+Q+ISSTK++LG +P+ESVLD LP TK ELLLHWT +QE LKHFWSSYPITT + Y K
Sbjct: 473 LSQNISSTKYYLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAK 532
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D MS+IYPKLQE+KESVQSD RHQVSLLV PMLQALDAAFAHYDAD+QKR++KSG
Sbjct: 533 VTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSG 592
Query: 541 TRHNGLM 561
R NG +
Sbjct: 593 ERPNGFV 599
>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
Length = 340
Score = 250 bits (639), Expect = 3e-64
Identities = 125/184 (67%), Positives = 148/184 (80%)
Frame = +1
Query: 4 QANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNGL 183
QANALK LGDT T+ ++ ++S +AY SLR I +IK GL +PI+ +IA KV NGL
Sbjct: 155 QANALKTLGDTLVETRQMKCNLSTSEAYGSLRECISEIKIAGLSDPIVKPEIAFKVFNGL 214
Query: 184 TQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDKV 363
TQ+ISSTK+HLG +P ESVLD LP +TK ELL HWT +QE LKHFWSSYPITT +LY KV
Sbjct: 215 TQNISSTKYHLGKNPQESVLDRLPNITKDELLHHWTSIQELLKHFWSSYPITTSYLYVKV 274
Query: 364 IRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSGT 543
R++D MS+IYPKLQE+KESVQSDFRHQVSLLV PMLQALDAAFA YDAD+QKR++K G
Sbjct: 275 GRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFARYDADLQKRSAKGGD 334
Query: 544 RHNG 555
R NG
Sbjct: 335 RTNG 338
>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
Length = 409
Score = 248 bits (634), Expect = 1e-63
Identities = 124/178 (69%), Positives = 149/178 (83%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANALKAL D + L+SSVS+ +AY SL+N + + MGL EP+M+ ++ALKVL+
Sbjct: 231 QQANALKALADGSGGERTLKSSVSSHEAYGSLKNLVSHNRVMGLTEPVMSHEVALKVLSA 290
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LTQ+ISSTKFHLG++P+ESVLD LPK TK ELL+ WT VQE LKHFWSSYPITT +LY K
Sbjct: 291 LTQNISSTKFHLGSNPHESVLDRLPKSTKDELLIQWTSVQELLKHFWSSYPITTKYLYTK 350
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASK 534
V R++D MS+IY KLQE+KESV SDFRHQVSLLVHPMLQALDAAFAHYDADVQ+R++K
Sbjct: 351 VTRMKDAMSQIYLKLQEIKESVPSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSTK 408
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum lycopersicum]
Length = 599
Score = 247 bits (631), Expect = 3e-63
Identities = 122/187 (65%), Positives = 152/187 (81%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+KALGD + + L+ VS +A+ SL+++I +I GL EPI++ ++ALKV N
Sbjct: 413 QQANAIKALGDAETGIRQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNL 472
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
L+Q+ISSTK+HLG +P+ESVLD LP TK ELLLHWT +QE LKHFWSSYPITT + Y K
Sbjct: 473 LSQNISSTKYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAK 532
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D MS+IYPKLQE+KESVQSD RHQVSLLV PMLQALDAAFAHYDAD+QKR+++SG
Sbjct: 533 VTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSG 592
Query: 541 TRHNGLM 561
R NG +
Sbjct: 593 ERPNGFV 599
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 226 bits (575), Expect = 9e-57
Identities = 112/185 (60%), Positives = 144/185 (77%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQAN LKA D+ ++ K S+S +AY S+R+AI +IK+MGL +PI+N ++ALKV +G
Sbjct: 381 QQANTLKASRDSQASMK---CSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSG 437
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT +ISS K+HLG +P E+VLD LP TK +LL HW +QE LKHFWSSYPITT +LY K
Sbjct: 438 LTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSK 497
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D +S IYP+L+EMKES+ +D RHQVSLLV PM QALDAA HYDAD+QKR++KSG
Sbjct: 498 VNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSG 557
Query: 541 TRHNG 555
+ NG
Sbjct: 558 EKPNG 562
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 226 bits (575), Expect = 9e-57
Identities = 112/185 (60%), Positives = 144/185 (77%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQAN LKA D+ ++ K S+S +AY S+R+AI +IK+MGL +PI+N ++ALKV +G
Sbjct: 414 QQANTLKASRDSQASMK---CSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSG 470
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT +ISS K+HLG +P E+VLD LP TK +LL HW +QE LKHFWSSYPITT +LY K
Sbjct: 471 LTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSK 530
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D +S IYP+L+EMKES+ +D RHQVSLLV PM QALDAA HYDAD+QKR++KSG
Sbjct: 531 VNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSG 590
Query: 541 TRHNG 555
+ NG
Sbjct: 591 EKPNG 595
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Citrus sinensis]
Length = 597
Score = 225 bits (574), Expect = 1e-56
Identities = 112/185 (60%), Positives = 143/185 (77%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQAN LKA D A ++ S+S +AY S+R+AI +IK+MGL +PI+N ++ALKV +G
Sbjct: 414 QQANTLKASRD---AQASMKCSLSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSG 470
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT +ISS K+HLG +P E+VLD LP TK +LL HW +QE LKHFWSSYPITT +LY K
Sbjct: 471 LTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSK 530
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D +S IYP+L+EMKES+ +D RHQVSLLV PM QALDAA HYDAD+QKR++KSG
Sbjct: 531 VNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSG 590
Query: 541 TRHNG 555
+ NG
Sbjct: 591 EKPNG 595
>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Cucumis sativus]
Length = 729
Score = 224 bits (571), Expect = 2e-56
Identities = 111/185 (60%), Positives = 141/185 (76%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+K L DT + + + S+S +AY SLR +I +IK G + PI+ ++AL V NG
Sbjct: 543 QQANAIKTLDDTRAGMQQTKCSLSTTEAYGSLRESISEIKSSGFNHPIIKPEVALMVYNG 602
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LTQ+ISSTK+ LG +P ES+L+ LP TK ELL HW +QE LKHFWSSYPITT +LY K
Sbjct: 603 LTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLKHFWSSYPITTSYLYTK 662
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D M+KIY +L+E+KE+V +DFRHQVSLLV PM QALDAAF H+DAD+QKR+ KSG
Sbjct: 663 VSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDADMQKRSVKSG 722
Query: 541 TRHNG 555
R NG
Sbjct: 723 ERLNG 727
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 221 bits (563), Expect = 2e-55
Identities = 110/159 (69%), Positives = 131/159 (82%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANALK LGDT + +K ++ S+S+ +AY SLR I +IK +GL +PI+ DIALKVLNG
Sbjct: 459 QQANALKTLGDTLAGSKQIKCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNG 518
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LTQ+ISSTKFHLG +P ESVLD LP +TK ELL HWT +QE L+HFWSSYPITT +LY K
Sbjct: 519 LTQNISSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTK 578
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQ 477
R++D MS+IYPKLQE+KESVQSDFRHQVSLLV PMLQ
Sbjct: 579 ASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQ 617
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 209 bits (533), Expect = 6e-52
Identities = 106/179 (59%), Positives = 133/179 (74%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
Q+ANA KA GDTGS +S QAY+SLR I ++K +G +PI+ D+ALKVLN
Sbjct: 420 QRANAFKATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLND 479
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
+ Q +SST LG +P +VLDMLP TK ELL HWT +QE L+HFWSSYP+TT L+ K
Sbjct: 480 VNQQLSSTDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAK 539
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKS 537
V RV+D M++IY KL E+KESVQS+FRHQVSLLV PMLQ LD AF HYDA++QKR++K+
Sbjct: 540 VNRVKDAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKT 598
>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Cicer arietinum]
Length = 586
Score = 209 bits (532), Expect = 8e-52
Identities = 104/185 (56%), Positives = 141/185 (76%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQ NALK+L D+ + + +R ++ + +AY SLR +I IK +GL +P+++ ++A KVLNG
Sbjct: 401 QQVNALKSLDDSLAGKEQIRCNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNG 460
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT++ISSTK HLG S ESVLD+LP TK +LL HW QE L+HFWSSYP+TT +L +K
Sbjct: 461 LTKNISSTKSHLGKSSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNK 520
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
R++D +S+IY KL+E+K S +SD RHQVSL+VHPM QALDAA HYDADV+KR ++ G
Sbjct: 521 TKRMKDAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNAR-G 579
Query: 541 TRHNG 555
T+ NG
Sbjct: 580 TKPNG 584
>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
gi|550334091|gb|EEE90962.2| transcription factor-related
family protein [Populus trichocarpa]
Length = 603
Score = 206 bits (523), Expect = 9e-51
Identities = 106/185 (57%), Positives = 137/185 (74%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQA ALK DT T P++ +SA ++Y SLR++I IK GL +PI+ ++A+KVL+
Sbjct: 417 QQATALKNSRDTSIGTDPVKRILSAEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSV 476
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT +ISSTK+ G + SVLD LP K ELL HWT +QE LKH+WSSYPITT +LY K
Sbjct: 477 LTHNISSTKYDTGKNHGLSVLDTLPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTK 536
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D MSKI +LQE+KESVQSD RHQV+LL+ PM QAL+AA HYDA++QKR+++SG
Sbjct: 537 VSRLKDAMSKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSG 596
Query: 541 TRHNG 555
R NG
Sbjct: 597 DRSNG 601
>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
gi|462419824|gb|EMJ24087.1| hypothetical protein
PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 206 bits (523), Expect = 9e-51
Identities = 107/180 (59%), Positives = 135/180 (75%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQ NALK L D+ + T+ + S++ +AY SLR AI IK +GL + +IA+ VLNG
Sbjct: 379 QQVNALKTLDDSRTGTEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNG 438
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LTQ+ISSTK+ LG +P +SVLD LP TK ELL HW +QE L+HFWSSYPITT +L K
Sbjct: 439 LTQNISSTKYQLGKNPQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTK 498
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
V R++D MS+IY +L+E+K QSDFRHQVSLLV PM QALDAAF H+DAD+QKRA++SG
Sbjct: 499 VGRLKDAMSQIYRQLEEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSG 555
>ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-3-like isoform X1 [Glycine max]
gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA
polymerase II transcription factor B subunit 1-3-like
isoform X2 [Glycine max]
Length = 587
Score = 203 bits (516), Expect = 6e-50
Identities = 99/185 (53%), Positives = 139/185 (75%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+K L D+ + + ++ S+ + +AYDSLR +I IK GL +P+ + D+ALKVLNG
Sbjct: 402 QQANAVKTLDDSQAGMEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNG 461
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT++I+STK+HLG S ESVLD+LP TK +LL HW QE L+HFWSSYP++T +L K
Sbjct: 462 LTKNITSTKYHLGKSSQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSK 521
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
R++D +S+IY KL+++K S +SD RH VSL+VHPM QAL+AA HY+AD++KR ++ G
Sbjct: 522 TRRLKDSISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-G 580
Query: 541 TRHNG 555
+ NG
Sbjct: 581 QKPNG 585
>ref|XP_003591640.1| General transcription factor IIH subunit [Medicago truncatula]
gi|355480688|gb|AES61891.1| General transcription factor
IIH subunit [Medicago truncatula]
Length = 586
Score = 202 bits (515), Expect = 8e-50
Identities = 101/185 (54%), Positives = 138/185 (74%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+K L D+ S + +R ++ + +AY SLR +I +IK MGL +P+++ ++A KVL+
Sbjct: 401 QQANAVKTLDDSLSGKEKIRCNLGSEEAYGSLRESISNIKTMGLRDPLLSHEVAFKVLSE 460
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT++ISSTK +LG S ESVLD+LP TK +LL HW QE L+HFWSSYP+T L DK
Sbjct: 461 LTKNISSTKSNLGKSSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTKQSLVDK 520
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
R++D +S+IY KL+E+K S +SD RHQVSL+VHPM QALDAA HYDAD+ +R +K G
Sbjct: 521 ARRLKDAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADITRRNAK-G 579
Query: 541 TRHNG 555
++ NG
Sbjct: 580 SKRNG 584
>gb|ABE86684.1| general transcription factor IIH component, related [Medicago
truncatula]
Length = 370
Score = 202 bits (515), Expect = 8e-50
Identities = 101/185 (54%), Positives = 138/185 (74%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+K L D+ S + +R ++ + +AY SLR +I +IK MGL +P+++ ++A KVL+
Sbjct: 185 QQANAVKTLDDSLSGKEKIRCNLGSEEAYGSLRESISNIKTMGLRDPLLSHEVAFKVLSE 244
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT++ISSTK +LG S ESVLD+LP TK +LL HW QE L+HFWSSYP+T L DK
Sbjct: 245 LTKNISSTKSNLGKSSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTKQSLVDK 304
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
R++D +S+IY KL+E+K S +SD RHQVSL+VHPM QALDAA HYDAD+ +R +K G
Sbjct: 305 ARRLKDAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADITRRNAK-G 363
Query: 541 TRHNG 555
++ NG
Sbjct: 364 SKRNG 368
>ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
gi|561017368|gb|ESW16172.1| hypothetical protein
PHAVU_007G134900g [Phaseolus vulgaris]
Length = 588
Score = 202 bits (514), Expect = 1e-49
Identities = 99/185 (53%), Positives = 139/185 (75%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+K L D+ + + S+ + +AY SLR +I I+ GL +P+ + ++ALKVL+G
Sbjct: 403 QQANAVKTLDDSQPGMEQMMCSLGSEEAYGSLRASISKIQTTGLRDPLFSPEVALKVLHG 462
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT++ISS+K+HLG + ESVLD+LP TK +LL HW QE L+H+WSSYP+TT +L +K
Sbjct: 463 LTKNISSSKYHLGKTSQESVLDILPNTTKEKLLDHWVCSQELLRHYWSSYPVTTQNLVNK 522
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
R++D +S+IY KL+E+K S QSD RHQVSL+VHPM QALDAA HYDAD++KR ++ G
Sbjct: 523 TRRLKDSISQIYSKLEEIKVSAQSDLRHQVSLVVHPMQQALDAALLHYDADIRKRNAR-G 581
Query: 541 TRHNG 555
++ NG
Sbjct: 582 SKSNG 586
>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
gi|222856470|gb|EEE94017.1| transcription factor-related
family protein [Populus trichocarpa]
Length = 586
Score = 199 bits (505), Expect = 1e-48
Identities = 100/177 (56%), Positives = 131/177 (74%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQA+ALK DT P+R ++S ++Y SLR++I IK GL +P++ ++A KVL
Sbjct: 410 QQASALKTSRDTSIGNDPVRCTLSVEESYASLRDSISHIKNTGLVDPMVTPEVAAKVLLV 469
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT +ISSTK+ LG +P SVLD LP K EL+ HWT +QE L+H+WSSYPITT +LY+K
Sbjct: 470 LTHNISSTKYDLGKNPGLSVLDTLPNSIKEELMYHWTSLQELLRHYWSSYPITTMYLYNK 529
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRAS 531
V R++D MSKI +LQE+KESVQSD RHQV+LL+ PM QAL+ A HYDAD+QKR+S
Sbjct: 530 VSRLKDAMSKIDSQLQELKESVQSDLRHQVTLLIRPMQQALEVAMQHYDADMQKRSS 586
>ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Glycine max]
Length = 587
Score = 197 bits (501), Expect = 3e-48
Identities = 98/185 (52%), Positives = 136/185 (73%)
Frame = +1
Query: 1 QQANALKALGDTGSATKPLRSSVSAGQAYDSLRNAIFDIKEMGLDEPIMNQDIALKVLNG 180
QQANA+K L D+ + + ++ S+ + +AY SLR +I IK GL +P+ + D+ALKVLNG
Sbjct: 402 QQANAVKTLDDSQTGMEQMKCSLGSEEAYGSLRASISKIKTTGLRDPLFSPDVALKVLNG 461
Query: 181 LTQSISSTKFHLGNSPNESVLDMLPKVTKVELLLHWTIVQEYLKHFWSSYPITTHHLYDK 360
LT++ISS K+HLG S SVLD+LP TK LL HW QE L+HFWSSYPITT +L +K
Sbjct: 462 LTKNISSPKYHLGRSSQGSVLDILPNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNK 521
Query: 361 VIRVRDRMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQKRASKSG 540
R+++ +S+IY KL+++K S +SD RH VSL+VHPM QAL+AA HY+AD++KR ++ G
Sbjct: 522 TRRLKESISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-G 580
Query: 541 TRHNG 555
+ NG
Sbjct: 581 QKPNG 585