BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00033660
         (472 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus...   112   6e-40
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   103   9e-35
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   101   4e-33
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit...   105   6e-33
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   105   1e-32
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...    96   3e-32
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...    97   3e-32
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   112   3e-31
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...   107   1e-30
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...   107   1e-30
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    99   1e-30
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    99   1e-30
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           104   7e-30
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   101   2e-29
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    98   6e-29
ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    92   6e-28
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul...    94   4e-27
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...    98   5e-27
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...    89   1e-26
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...    89   1e-26

>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus guttatus]
          Length = 457

 Score =  112 bits (280), Expect(3) = 6e-40
 Identities = 54/63 (85%), Positives = 59/63 (93%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDELAAKYL++D  E PRLVHRLDRDSSGILVMGRTQLSTT+LHSVFREKT
Sbjct: 188 QGGIGIKRSLDELAAKYLKFDFTESPRLVHRLDRDSSGILVMGRTQLSTTILHSVFREKT 247

Query: 365 IGA 373
            GA
Sbjct: 248 FGA 250



 Score = 50.4 bits (119), Expect(3) = 6e-40
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           ++ +FV+SLELYKD AIIVINKPPG+PVQ  I I+
Sbjct: 160 KEMEFVRSLELYKDPAIIVINKPPGLPVQGGIGIK 194



 Score = 47.8 bits (112), Expect(3) = 6e-40
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 379 NDVLGGKNILQKRYLALVIGSPRRRQGSISV 471
           N+V G K ILQK+Y ALVIGSPRRR+G ISV
Sbjct: 252 NNVCGNKKILQKKYWALVIGSPRRREGLISV 282


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score =  103 bits (256), Expect(3) = 9e-35
 Identities = 53/77 (68%), Positives = 58/77 (75%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDELAA  L YD  +PPRLVHRLDRD SGILVMGRTQ S TVLHSVFREKT
Sbjct: 195 QGGIGIKRSLDELAATCLSYDLSQPPRLVHRLDRDCSGILVMGRTQTSATVLHSVFREKT 254

Query: 365 IGAFSMMFLAVKIFFRR 415
            GA   +    K   +R
Sbjct: 255 FGASDDVIKHAKSILQR 271



 Score = 48.9 bits (115), Expect(3) = 9e-35
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+ +F++SL LYKD AIIVINKPPG+PVQ  I I+
Sbjct: 167 EEAEFIRSLVLYKDPAIIVINKPPGLPVQGGIGIK 201



 Score = 41.2 bits (95), Expect(3) = 9e-35
 Identities = 19/25 (76%), Positives = 24/25 (96%)
 Frame = +1

Query: 397 KNILQKRYLALVIGSPRRRQGSISV 471
           K+ILQ+RYLALVIGSPR+++G ISV
Sbjct: 266 KSILQRRYLALVIGSPRQQEGLISV 290


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  101 bits (252), Expect(3) = 4e-33
 Identities = 50/63 (79%), Positives = 53/63 (84%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+ S DELAA  L YD+ EPPRLVHRLDRDSSGILVMGRTQ ST VLHSVFREKT
Sbjct: 266 QGGIGIKSSFDELAASCLSYDYSEPPRLVHRLDRDSSGILVMGRTQTSTMVLHSVFREKT 325

Query: 365 IGA 373
             A
Sbjct: 326 FAA 328



 Score = 49.3 bits (116), Expect(3) = 4e-33
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           ++  F++ LELYKD AIIV+NKPPGMPVQ  I I+
Sbjct: 238 KEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIK 272



 Score = 36.6 bits (83), Expect(3) = 4e-33
 Identities = 17/30 (56%), Positives = 24/30 (80%)
 Frame = +1

Query: 379 NDVLGGKNILQKRYLALVIGSPRRRQGSIS 468
           +D+   + ILQ++Y ALVIGSPRR++G IS
Sbjct: 331 HDIGERRRILQRKYWALVIGSPRRQKGIIS 360


>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
           PREDICTED: RNA pseudouridine synthase 4,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 362

 Score =  105 bits (262), Expect(3) = 6e-33
 Identities = 51/63 (80%), Positives = 55/63 (87%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GIRRS+DELAA  L YD+ EPPRLVHRLDRDSSGILVMGRTQ S TVLHS+FREKT
Sbjct: 91  QGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKT 150

Query: 365 IGA 373
             A
Sbjct: 151 FSA 153



 Score = 52.0 bits (123), Expect(3) = 6e-33
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+ +F+QSLELYKDSAIIVINKP GMPVQ  I I+
Sbjct: 63  EEVEFIQSLELYKDSAIIVINKPHGMPVQGGIGIR 97



 Score = 29.6 bits (65), Expect(3) = 6e-33
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 397 KNILQKRYLALVIGSPRRRQGSIS 468
           K ILQ+ Y ALV+G+PR  +G IS
Sbjct: 162 KKILQRWYWALVVGTPRCSKGVIS 185


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  105 bits (262), Expect(3) = 1e-32
 Identities = 51/63 (80%), Positives = 55/63 (87%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GIRRS+DELAA  L YD+ EPPRLVHRLDRDSSGILVMGRTQ S TVLHS+FREKT
Sbjct: 223 QGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKT 282

Query: 365 IGA 373
             A
Sbjct: 283 FSA 285



 Score = 50.8 bits (120), Expect(3) = 1e-32
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  F+QSLELYKDSAIIVINKP GMPVQ  I I+
Sbjct: 195 EEVGFIQSLELYKDSAIIVINKPHGMPVQGGIGIR 229



 Score = 29.6 bits (65), Expect(3) = 1e-32
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 397 KNILQKRYLALVIGSPRRRQGSIS 468
           K ILQ+ Y ALV+G+PR  +G IS
Sbjct: 294 KRILQRWYWALVVGTPRCSKGVIS 317


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
           gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
           synthase, putative [Theobroma cacao]
          Length = 477

 Score = 96.3 bits (238), Expect(3) = 3e-32
 Identities = 46/60 (76%), Positives = 54/60 (90%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+ SLD+LAA  L +D+ EPPRLVHRLDRDSSGILVMGRTQ+S T+LHSVFRE+T
Sbjct: 206 QGGIGIKWSLDKLAAACLCFDYSEPPRLVHRLDRDSSGILVMGRTQMSATILHSVFREET 265



 Score = 49.7 bits (117), Expect(3) = 3e-32
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  F++ LELYKD AIIV+NKPPGMPVQ  I I+
Sbjct: 178 EELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIK 212



 Score = 38.9 bits (89), Expect(3) = 3e-32
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +1

Query: 379 NDVLGGKNILQKRYLALVIGSPRRRQGSI 465
           +DV   K ILQKRY ALVIGSPRR +G I
Sbjct: 271 DDVDNEKRILQKRYWALVIGSPRRPKGMI 299


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score = 97.1 bits (240), Expect(3) = 3e-32
 Identities = 46/63 (73%), Positives = 53/63 (84%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDEL+A     D+ EPPRLVHRLDRD SGILVMGRTQ S TVLH++FREKT
Sbjct: 201 QGGIGIKRSLDELSASCFSSDYSEPPRLVHRLDRDCSGILVMGRTQTSATVLHAIFREKT 260

Query: 365 IGA 373
           + A
Sbjct: 261 LAA 263



 Score = 50.4 bits (119), Expect(3) = 3e-32
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  F++ LELYKD+AIIV+NKPPGMPVQ  I I+
Sbjct: 173 EEINFIRGLELYKDAAIIVVNKPPGMPVQGGIGIK 207



 Score = 37.4 bits (85), Expect(3) = 3e-32
 Identities = 20/31 (64%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = +1

Query: 379 NDVLGGKN-ILQKRYLALVIGSPRRRQGSIS 468
           ND +G K  ILQ++Y ALVIGSPRR +G IS
Sbjct: 265 NDDVGNKRRILQRKYWALVIGSPRRPKGLIS 295


>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  112 bits (279), Expect(2) = 3e-31
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDELAA YLRYD  EPPRLVHRLDRDSSGIL+MGRTQ S T+LHS+FREKT
Sbjct: 205 QGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREKT 264

Query: 365 IGAFSMMFLAVKIFFRRGIW 424
            GA +      K   +R  W
Sbjct: 265 FGASNNDIDTKKRILQRRYW 284



 Score = 48.9 bits (115), Expect(2) = 3e-31
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  FV +LELYKD AIIV+NKPPG+PVQ  I I+
Sbjct: 177 EEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIK 211


>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395210|gb|EMJ01009.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  107 bits (268), Expect(2) = 1e-30
 Identities = 55/80 (68%), Positives = 60/80 (75%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDELAA  L YD  EPPRLVHRLDRDSSGILVMGRTQ S TVLHS+FREKT
Sbjct: 212 QGGIGIKRSLDELAAACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKT 271

Query: 365 IGAFSMMFLAVKIFFRRGIW 424
            GA +      K   +R  W
Sbjct: 272 FGASNDEIDDAKRILQRRYW 291



 Score = 51.2 bits (121), Expect(2) = 1e-30
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  F++SLELYKD AIIVINKPPGMPVQ  I I+
Sbjct: 184 EEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIK 218


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395209|gb|EMJ01008.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score =  107 bits (268), Expect(2) = 1e-30
 Identities = 55/80 (68%), Positives = 60/80 (75%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDELAA  L YD  EPPRLVHRLDRDSSGILVMGRTQ S TVLHS+FREKT
Sbjct: 212 QGGIGIKRSLDELAAACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKT 271

Query: 365 IGAFSMMFLAVKIFFRRGIW 424
            GA +      K   +R  W
Sbjct: 272 FGASNDEIDDAKRILQRRYW 291



 Score = 51.2 bits (121), Expect(2) = 1e-30
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  F++SLELYKD AIIVINKPPGMPVQ  I I+
Sbjct: 184 EEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIK 218


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score = 99.0 bits (245), Expect(3) = 1e-30
 Identities = 47/63 (74%), Positives = 54/63 (85%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+G++RSLDELAA  L Y + EPPRLVHRLDRDSSGIL+MGRT  ST++LHSVFREKT
Sbjct: 206 QGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRTSTSTSLLHSVFREKT 265

Query: 365 IGA 373
             A
Sbjct: 266 FEA 268



 Score = 44.3 bits (103), Expect(3) = 1e-30
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  F+ SL L+KD AI+VINKPPG+PVQ  I ++
Sbjct: 178 EEETFMHSLVLHKDPAILVINKPPGLPVQGGIGVK 212



 Score = 35.8 bits (81), Expect(3) = 1e-30
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = +1

Query: 379 NDVLGGKNILQKRYLALVIGSPRRRQGSIS 468
           N V   K IL KRY ALVIGSPRR +G I+
Sbjct: 273 NHVDSEKKILLKRYWALVIGSPRRSKGLIT 302


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score = 99.0 bits (245), Expect(3) = 1e-30
 Identities = 47/63 (74%), Positives = 54/63 (85%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+G++RSLDELAA  L Y + EPPRLVHRLDRDSSGIL+MGRT  ST++LHSVFREKT
Sbjct: 201 QGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRTSTSTSLLHSVFREKT 260

Query: 365 IGA 373
             A
Sbjct: 261 FEA 263



 Score = 44.3 bits (103), Expect(3) = 1e-30
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+  F+ SL L+KD AI+VINKPPG+PVQ  I ++
Sbjct: 173 EEETFMHSLVLHKDPAILVINKPPGLPVQGGIGVK 207



 Score = 35.8 bits (81), Expect(3) = 1e-30
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = +1

Query: 379 NDVLGGKNILQKRYLALVIGSPRRRQGSIS 468
           N V   K IL KRY ALVIGSPRR +G I+
Sbjct: 268 NHVDSEKKILLKRYWALVIGSPRRSKGLIT 297


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  104 bits (260), Expect(2) = 7e-30
 Identities = 52/80 (65%), Positives = 60/80 (75%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+ SLD+LA   L YD+ EPPRLVHRLDRD SGILVMGRTQ S TVLHS+FREKT
Sbjct: 199 QGGIGIKTSLDQLAVTCLSYDYTEPPRLVHRLDRDCSGILVMGRTQTSATVLHSIFREKT 258

Query: 365 IGAFSMMFLAVKIFFRRGIW 424
            GA +   +  KI  +R  W
Sbjct: 259 FGASNDETVKGKIVLQRRYW 278



 Score = 51.6 bits (122), Expect(2) = 7e-30
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+ KF++SLELYKD AI+V+NKPPG+PVQ  I I+
Sbjct: 171 EEVKFIRSLELYKDPAIVVVNKPPGLPVQGGIGIK 205


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  101 bits (251), Expect(2) = 2e-29
 Identities = 48/80 (60%), Positives = 62/80 (77%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDELAAKY+R+++ E PRLVHRLDRD SG+LVMGRTQLS + LHS+FREKT
Sbjct: 196 QGGIGIKRSLDELAAKYMRHEYSEAPRLVHRLDRDCSGLLVMGRTQLSASALHSIFREKT 255

Query: 365 IGAFSMMFLAVKIFFRRGIW 424
             + +    + K   ++  W
Sbjct: 256 FDSQNEDLESKKRILQKKYW 275



 Score = 53.9 bits (128), Expect(2) = 2e-29
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+RKFV SLELYKD  I+V+NKPPGMPVQ  I I+
Sbjct: 168 EERKFVHSLELYKDPEIVVVNKPPGMPVQGGIGIK 202


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score = 98.2 bits (243), Expect(2) = 6e-29
 Identities = 47/80 (58%), Positives = 60/80 (75%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+GI+RSLDELAAKY+ + + E PRLVHRLDRD SG+LVMGRTQLS + LHS+FREKT
Sbjct: 196 QGGIGIKRSLDELAAKYMSHQYSEAPRLVHRLDRDCSGLLVMGRTQLSASALHSIFREKT 255

Query: 365 IGAFSMMFLAVKIFFRRGIW 424
             + +    + K   ++  W
Sbjct: 256 FDSQNEDLESKKRILQKKYW 275



 Score = 55.1 bits (131), Expect(2) = 6e-29
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           E+RKFV SLELYKD+ IIV+NKPPGMPVQ  I I+
Sbjct: 168 EERKFVHSLELYKDAEIIVVNKPPGMPVQGGIGIK 202


>ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cicer
           arietinum]
          Length = 458

 Score = 92.4 bits (228), Expect(3) = 6e-28
 Identities = 44/60 (73%), Positives = 50/60 (83%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+ I+ SLD LAA  L YD+ +PPRLVHRLDRD SGILVMGRTQ ST VLHS+FR+KT
Sbjct: 187 QGGINIKWSLDALAASSLNYDYSQPPRLVHRLDRDCSGILVMGRTQTSTVVLHSIFRDKT 246



 Score = 44.7 bits (104), Expect(3) = 6e-28
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +3

Query: 12  KFVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           KF++SL +YKD A +V+NKPPGMPVQ  I I+
Sbjct: 162 KFMRSLVIYKDPATVVLNKPPGMPVQGGINIK 193



 Score = 33.1 bits (74), Expect(3) = 6e-28
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 397 KNILQKRYLALVIGSPRRRQGSIS 468
           K ILQ+RY ALVIG PRR  G I+
Sbjct: 257 KRILQRRYWALVIGRPRRSGGLIT 280


>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355501934|gb|AES83137.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 430

 Score = 94.0 bits (232), Expect(3) = 4e-27
 Identities = 47/80 (58%), Positives = 58/80 (72%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG+ I+ SLD +AA+ L YD+ +PPRLVHRLDRD SGILVMGRT+ ST +LHS+FREKT
Sbjct: 158 QGGINIKLSLDAVAAQSLNYDYSQPPRLVHRLDRDCSGILVMGRTKTSTALLHSIFREKT 217

Query: 365 IGAFSMMFLAVKIFFRRGIW 424
             A +      KI  +R  W
Sbjct: 218 SRASNEENDTEKIILQRRYW 237



 Score = 42.7 bits (99), Expect(3) = 4e-27
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +3

Query: 15  FVQSLELYKDSAIIVINKPPGMPVQVDICIQ 107
           F++SL +YKD  I+V+NKPPGMPVQ  I I+
Sbjct: 134 FIRSLVIYKDPHILVLNKPPGMPVQGGINIK 164



 Score = 30.8 bits (68), Expect(3) = 4e-27
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 397 KNILQKRYLALVIGSPRRRQGSIS 468
           K ILQ+RY ALV+G PRR  G ++
Sbjct: 229 KIILQRRYWALVLGCPRRSGGVVN 252


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score = 98.2 bits (243), Expect(2) = 5e-27
 Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG G++ SLD L A  L+YD+ E PRLVHRLD+DSSGILVMGRTQ STT+LHS+FR+KT
Sbjct: 188 QGGTGVKLSLDVLVASSLKYDYSEVPRLVHRLDQDSSGILVMGRTQESTTLLHSIFRDKT 247

Query: 365 IGA-FSMMFLAVKIFFRRGIW 424
            GA F++     KI  +R  W
Sbjct: 248 CGASFNVDIKNSKIILKRKYW 268



 Score = 48.5 bits (114), Expect(2) = 5e-27
 Identities = 18/29 (62%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQ 89
           E+ ++++SLE+YKD+AI+V+NKPPG+PVQ
Sbjct: 160 EEMEYIRSLEVYKDAAIVVVNKPPGLPVQ 188


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
           gi|482566291|gb|EOA30480.1| hypothetical protein
           CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score = 89.4 bits (220), Expect(3) = 1e-26
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG GI+ S+DELAA  L +D  E PRLVHRLDRD SG+LV+ RTQ + TVLHS+FREKT
Sbjct: 203 QGGTGIKTSIDELAATCLTFDKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKT 262

Query: 365 IGA 373
            GA
Sbjct: 263 SGA 265



 Score = 43.5 bits (101), Expect(3) = 1e-26
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQ 89
           E+RKFV SL LYKD +IIV+NKP GM VQ
Sbjct: 175 EERKFVCSLVLYKDPSIIVLNKPHGMAVQ 203



 Score = 33.1 bits (74), Expect(3) = 1e-26
 Identities = 16/26 (61%), Positives = 22/26 (84%), Gaps = 2/26 (7%)
 Frame = +1

Query: 397 KNI--LQKRYLALVIGSPRRRQGSIS 468
           KNI  L+++Y+ALVIG PRR++G IS
Sbjct: 272 KNIKSLKRKYMALVIGCPRRQRGQIS 297


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score = 89.0 bits (219), Expect(3) = 1e-26
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = +2

Query: 185 QGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKT 364
           QGG GI+ S+DELAA  L +D  E PRLVHRLDRD SG+LV+ RTQ + TVLHS+FREKT
Sbjct: 204 QGGSGIKTSIDELAATCLTFDKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKT 263

Query: 365 IGA 373
            GA
Sbjct: 264 CGA 266



 Score = 43.5 bits (101), Expect(3) = 1e-26
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +3

Query: 3   EDRKFVQSLELYKDSAIIVINKPPGMPVQ 89
           E+RKFV SL LYKD AIIV+NKP G+ VQ
Sbjct: 176 EERKFVCSLVLYKDPAIIVLNKPHGLAVQ 204



 Score = 33.1 bits (74), Expect(3) = 1e-26
 Identities = 16/26 (61%), Positives = 22/26 (84%), Gaps = 2/26 (7%)
 Frame = +1

Query: 397 KNI--LQKRYLALVIGSPRRRQGSIS 468
           KNI  L+++Y+ALVIG PRR++G IS
Sbjct: 273 KNIKSLKRKYMALVIGCPRRQKGQIS 298