BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00027392
         (435 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39673.1| hypothetical protein MIMGU_mgv1a010374mg [Mimulus...   142   5e-32
gb|EPS61794.1| hypothetical protein M569_12998, partial [Genlise...   123   2e-26
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu...   122   5e-26
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu...   122   5e-26
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [...   119   3e-25
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [...   119   3e-25
ref|XP_007218728.1| hypothetical protein PRUPE_ppa009068mg [Prun...   117   2e-24
ref|XP_007218727.1| hypothetical protein PRUPE_ppa009068mg [Prun...   117   2e-24
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...   117   2e-24
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   114   1e-23
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_006436544.1| hypothetical protein CICLE_v10032050mg [Citr...   114   2e-23
ref|XP_007010069.1| Binding to TOMV RNA 1L (long form) isoform 7...   114   2e-23
ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6...   114   2e-23
ref|XP_007010067.1| Binding to TOMV RNA 1L (long form) isoform 5...   114   2e-23
ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma ...   114   2e-23
ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1...   114   2e-23
ref|XP_002532622.1| Far upstream element-binding protein, putati...   112   5e-23
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i...   111   9e-23
ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i...   111   9e-23

>gb|EYU39673.1| hypothetical protein MIMGU_mgv1a010374mg [Mimulus guttatus]
          Length = 314

 Score =  142 bits (358), Expect = 5e-32
 Identities = 71/103 (68%), Positives = 85/103 (82%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           MEG+K+AY+  SPE Q N             EEKTTH+RFLLSNAEAGSVIGKGG+TIND
Sbjct: 1   MEGNKSAYSAASPEEQLNHSPPPPDN-----EEKTTHLRFLLSNAEAGSVIGKGGATIND 55

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
           IQSQSGAR+QLSRN+EYFPGT+DR++MVSG +DD+LKAV+LI+
Sbjct: 56  IQSQSGARVQLSRNFEYFPGTSDRIIMVSGTIDDVLKAVNLIL 98



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/66 (40%), Positives = 45/66 (68%)
 Frame = +2

Query: 236 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 415
           +R ++ N+  G +IGKGGS I  +  +S A I++S    Y+PG +DR+V VSG + + ++
Sbjct: 119 IRLVVPNSSCGGIIGKGGSIIRSLMEESSASIKISSQDTYYPGLHDRLVTVSGSLGEQMR 178

Query: 416 AVDLIM 433
           AV+LI+
Sbjct: 179 AVELIL 184


>gb|EPS61794.1| hypothetical protein M569_12998, partial [Genlisea aurea]
          Length = 78

 Score =  123 bits (309), Expect = 2e-26
 Identities = 58/72 (80%), Positives = 68/72 (94%)
 Frame = +2

Query: 218 EEKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGR 397
           EEK+TH+RFLLSN EAGS+IGKGGSTINDIQSQSG+R+QLSRNYEYFPGT+DR+++VSG 
Sbjct: 1   EEKSTHLRFLLSNTEAGSIIGKGGSTINDIQSQSGSRVQLSRNYEYFPGTSDRIILVSGT 60

Query: 398 VDDILKAVDLIM 433
           V  ILKAVDLI+
Sbjct: 61  VGGILKAVDLIL 72


>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
           gi|550330463|gb|ERP56589.1| hypothetical protein
           POPTR_0010s23710g [Populus trichocarpa]
          Length = 313

 Score =  122 bits (306), Expect = 5e-26
 Identities = 62/103 (60%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  Q +            EEK T+ RFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITD 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSRNYE+FPGT+DR++MVSG +DD+LKAV+LI+
Sbjct: 60  FQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELII 102


>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
           gi|222865445|gb|EEF02576.1| hypothetical protein
           POPTR_0010s23710g [Populus trichocarpa]
          Length = 334

 Score =  122 bits (306), Expect = 5e-26
 Identities = 62/103 (60%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  Q +            EEK T+ RFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITD 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSRNYE+FPGT+DR++MVSG +DD+LKAV+LI+
Sbjct: 60  FQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELII 102


>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
          Length = 328

 Score =  119 bits (299), Expect = 3e-25
 Identities = 67/108 (62%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
 Frame = +2

Query: 119 MAMEGDKAAYAEVSPEVQQNQXXXXXXXXXXXX---EEKTTHVRFLLSNAEAGSVIGKGG 289
           MAMEG   +    S E Q  Q               EEK T+V+FLLSNAEAGS+IGKGG
Sbjct: 1   MAMEGGAESNYNSSTESQLEQSSPRKSPPPPPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 290 STINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
           STI + QS+SGARIQLSRNYE FPGT DR+VMVSG +DDILKAVDLI+
Sbjct: 61  STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLIL 108



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/65 (38%), Positives = 43/65 (66%)
 Frame = +2

Query: 239 RFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKA 418
           R ++ N+  G +IGKGG+TI      S A I++S     FPG +DR+V V+G +++ ++A
Sbjct: 130 RLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVTGTLEEQMRA 189

Query: 419 VDLIM 433
           ++LI+
Sbjct: 190 IELIL 194


>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
          Length = 328

 Score =  119 bits (299), Expect = 3e-25
 Identities = 67/108 (62%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
 Frame = +2

Query: 119 MAMEGDKAAYAEVSPEVQQNQXXXXXXXXXXXX---EEKTTHVRFLLSNAEAGSVIGKGG 289
           MAMEG   +    S E Q  Q               EEK T+V+FLLSNAEAGS+IGKGG
Sbjct: 1   MAMEGGAESNYNSSTESQLEQSSPRKSPPPLPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 290 STINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
           STI + QS+SGARIQLSRNYE FPGT DR+VMVSG +DDILKAVDLI+
Sbjct: 61  STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLIL 108



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/65 (38%), Positives = 43/65 (66%)
 Frame = +2

Query: 239 RFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKA 418
           R ++ N+  G +IGKGG+TI      S A I++S     FPG +DR+V V+G +++ ++A
Sbjct: 130 RLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVTGTLEEQMRA 189

Query: 419 VDLIM 433
           ++LI+
Sbjct: 190 IELIL 194


>ref|XP_007218728.1| hypothetical protein PRUPE_ppa009068mg [Prunus persica]
           gi|462415190|gb|EMJ19927.1| hypothetical protein
           PRUPE_ppa009068mg [Prunus persica]
          Length = 307

 Score =  117 bits (292), Expect = 2e-24
 Identities = 59/103 (57%), Positives = 76/103 (73%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  + +             EK T+VRFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEAPRRRSSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITD 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSRN+E+FPGT DR++MVSG +++ILKAVDL++
Sbjct: 60  FQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAVDLVL 102



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           E  T +R ++ N+  G +IGKGGSTI      S A I++S     + G NDR+V V+G +
Sbjct: 118 EPRTKLRLVVPNSSCGGIIGKGGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNL 177

Query: 401 DDILKAVDLIM 433
           D+ ++AVDLI+
Sbjct: 178 DEQMRAVDLIV 188


>ref|XP_007218727.1| hypothetical protein PRUPE_ppa009068mg [Prunus persica]
           gi|462415189|gb|EMJ19926.1| hypothetical protein
           PRUPE_ppa009068mg [Prunus persica]
          Length = 286

 Score =  117 bits (292), Expect = 2e-24
 Identities = 59/103 (57%), Positives = 76/103 (73%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  + +             EK T+VRFL+SNA AGSVIGKGG+TI D
Sbjct: 1   MESTESSYVS-SPEAPRRRSSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITD 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSRN+E+FPGT DR++MVSG +++ILKAVDL++
Sbjct: 60  FQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAVDLVL 102



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           E  T +R ++ N+  G +IGKGGSTI      S A I++S     + G NDR+V V+G +
Sbjct: 118 EPRTKLRLVVPNSSCGGIIGKGGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNL 177

Query: 401 DDILKAVDLIM 433
           D+ ++AVDLI+
Sbjct: 178 DEQMRAVDLIV 188


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
           gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
           protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/103 (56%), Positives = 76/103 (73%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE    +             EK T++RFL+SNA AGSVIGKGGSTIND
Sbjct: 1   MESTESSYVS-SPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTIND 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSRN+E+FPGT DR++MVSG +++ILKA++L++
Sbjct: 60  FQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVL 102


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  114 bits (286), Expect = 1e-23
 Identities = 59/103 (57%), Positives = 78/103 (75%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  ++AY   SPEV   +            E K+T++RFL+SNA AGSVIGKGGSTIND
Sbjct: 1   MESPESAYVS-SPEVPPKRSSPPRSPTSDFME-KSTYIRFLVSNAAAGSVIGKGGSTIND 58

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSRN+E+FPGT+DR++M+SG  ++I+KA++LI+
Sbjct: 59  FQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELIL 101


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  114 bits (286), Expect = 1e-23
 Identities = 59/103 (57%), Positives = 78/103 (75%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  ++AY   SPEV   +            E K+T++RFL+SNA AGSVIGKGGSTIND
Sbjct: 49  MESPESAYVS-SPEVPPKRSSPPRSPTSDFME-KSTYIRFLVSNAAAGSVIGKGGSTIND 106

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSRN+E+FPGT+DR++M+SG  ++I+KA++LI+
Sbjct: 107 FQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELIL 149


>ref|XP_006436544.1| hypothetical protein CICLE_v10032050mg [Citrus clementina]
           gi|567888046|ref|XP_006436545.1| hypothetical protein
           CICLE_v10032050mg [Citrus clementina]
           gi|567888048|ref|XP_006436546.1| hypothetical protein
           CICLE_v10032050mg [Citrus clementina]
           gi|568863771|ref|XP_006485304.1| PREDICTED: RNA-binding
           protein Nova-1-like isoform X1 [Citrus sinensis]
           gi|568863773|ref|XP_006485305.1| PREDICTED: RNA-binding
           protein Nova-1-like isoform X2 [Citrus sinensis]
           gi|557538740|gb|ESR49784.1| hypothetical protein
           CICLE_v10032050mg [Citrus clementina]
           gi|557538741|gb|ESR49785.1| hypothetical protein
           CICLE_v10032050mg [Citrus clementina]
           gi|557538742|gb|ESR49786.1| hypothetical protein
           CICLE_v10032050mg [Citrus clementina]
          Length = 336

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/103 (54%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME ++++Y   SP+V   +             EK T++RFL+SN  AG+VIGKGGSTIND
Sbjct: 1   METNESSYVP-SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIND 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QSQSGARIQLSR++E+FPGT DR++M+SG +D+IL+AVDL++
Sbjct: 60  FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVI 102



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/68 (38%), Positives = 45/68 (66%)
 Frame = +2

Query: 230 THVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDI 409
           T +R ++ N+  GS+IGK G+TI      S A I++SR    + G NDR+V ++G +D+ 
Sbjct: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181

Query: 410 LKAVDLIM 433
           ++A++LI+
Sbjct: 182 MRALELIL 189


>ref|XP_007010069.1| Binding to TOMV RNA 1L (long form) isoform 7 [Theobroma cacao]
           gi|508726982|gb|EOY18879.1| Binding to TOMV RNA 1L (long
           form) isoform 7 [Theobroma cacao]
          Length = 218

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/103 (53%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  + +             EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELIL 102



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 401 DDILKAVDLIM 433
           D+ ++A+DLI+
Sbjct: 178 DEQMRAIDLIL 188


>ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
           gi|508726981|gb|EOY18878.1| Binding to TOMV RNA 1L (long
           form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/103 (53%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  + +             EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELIL 102



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 401 DDILKAVDLIM 433
           D+ ++A+DLI+
Sbjct: 178 DEQMRAIDLIL 188


>ref|XP_007010067.1| Binding to TOMV RNA 1L (long form) isoform 5 [Theobroma cacao]
           gi|508726980|gb|EOY18877.1| Binding to TOMV RNA 1L (long
           form) isoform 5 [Theobroma cacao]
          Length = 285

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/103 (53%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  + +             EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELIL 102



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 401 DDILKAVDLIM 433
           D+ ++A+DLI+
Sbjct: 178 DEQMRAIDLIL 188


>ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
           gi|508726977|gb|EOY18874.1| Binding to TOMV RNA 1L
           isoform 2 [Theobroma cacao]
          Length = 334

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/103 (53%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  + +             EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELIL 102



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 401 DDILKAVDLIM 433
           D+ ++A+DLI+
Sbjct: 178 DEQMRAIDLIL 188


>ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
           gi|590565855|ref|XP_007010065.1| Binding to TOMV RNA 1L
           (long form) isoform 1 [Theobroma cacao]
           gi|590565859|ref|XP_007010066.1| Binding to TOMV RNA 1L
           (long form) isoform 1 [Theobroma cacao]
           gi|508726976|gb|EOY18873.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
           gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
           gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
           form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/103 (53%), Positives = 77/103 (74%)
 Frame = +2

Query: 125 MEGDKAAYAEVSPEVQQNQXXXXXXXXXXXXEEKTTHVRFLLSNAEAGSVIGKGGSTIND 304
           ME  +++Y   SPE  + +             EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1   MESTESSYVS-SPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 305 IQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILKAVDLIM 433
            QS+SGARIQLSRN+E+FPGT+DR++M+SG +D++LKA++LI+
Sbjct: 60  FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELIL 102



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           E  T VR ++ N+  GS+IGKGG+TI      S A I++S     F G NDR+V ++G +
Sbjct: 118 EPRTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTL 177

Query: 401 DDILKAVDLIM 433
           D+ ++A+DLI+
Sbjct: 178 DEQMRAIDLIL 188


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
           gi|223527642|gb|EEF29753.1| Far upstream element-binding
           protein, putative [Ricinus communis]
          Length = 314

 Score =  112 bits (280), Expect = 5e-23
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +2

Query: 221 EKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRV 400
           EK T+VRFL+SNA AGSVIGKGG+TI D QSQSGARIQLSRNYE+FPGT+DR++++SG +
Sbjct: 33  EKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILISGIL 92

Query: 401 DDILKAVDLIM 433
           DD+LK V+L++
Sbjct: 93  DDVLKGVELVL 103



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/68 (42%), Positives = 45/68 (66%)
 Frame = +2

Query: 230 THVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDI 409
           T VR ++ N+  GS+IGKGGS I     +S A I++S     F G NDR+V V+G +++ 
Sbjct: 122 TKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQ 181

Query: 410 LKAVDLIM 433
           ++A+DLI+
Sbjct: 182 MRAIDLIL 189


>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
           tuberosum]
          Length = 326

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/72 (73%), Positives = 64/72 (88%)
 Frame = +2

Query: 218 EEKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGR 397
           EE    ++FLLSNAEAGS+IGKGGSTI+D Q++SGARIQLSRN E+FPGT DR+VMVSG 
Sbjct: 38  EENKISIKFLLSNAEAGSIIGKGGSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGS 97

Query: 398 VDDILKAVDLIM 433
           +DD+LKAVDLI+
Sbjct: 98  IDDVLKAVDLIL 109



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/66 (39%), Positives = 42/66 (63%)
 Frame = +2

Query: 236 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 415
           VR ++ N+  G +IGKGGS I      S A I++    E FPG +DR+V+V G + + ++
Sbjct: 130 VRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLGEQMR 189

Query: 416 AVDLIM 433
           A++LI+
Sbjct: 190 AIELIL 195


>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
           tuberosum]
          Length = 327

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/72 (73%), Positives = 64/72 (88%)
 Frame = +2

Query: 218 EEKTTHVRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGR 397
           EE    ++FLLSNAEAGS+IGKGGSTI+D Q++SGARIQLSRN E+FPGT DR+VMVSG 
Sbjct: 38  EENKISIKFLLSNAEAGSIIGKGGSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGS 97

Query: 398 VDDILKAVDLIM 433
           +DD+LKAVDLI+
Sbjct: 98  IDDVLKAVDLIL 109



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/66 (39%), Positives = 42/66 (63%)
 Frame = +2

Query: 236 VRFLLSNAEAGSVIGKGGSTINDIQSQSGARIQLSRNYEYFPGTNDRVVMVSGRVDDILK 415
           VR ++ N+  G +IGKGGS I      S A I++    E FPG +DR+V+V G + + ++
Sbjct: 130 VRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIVIGTLGEQMR 189

Query: 416 AVDLIM 433
           A++LI+
Sbjct: 190 AIELIL 195