BLASTX nr result

ID: Mentha25_contig00025106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00025106
         (432 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38837.1| hypothetical protein MIMGU_mgv1a0003451mg, partia...    95   9e-18
ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...    77   2e-12
ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...    70   2e-10
ref|XP_006342572.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...    61   1e-07

>gb|EYU38837.1| hypothetical protein MIMGU_mgv1a0003451mg, partial [Mimulus
           guttatus]
          Length = 664

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 55/117 (47%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
 Frame = +3

Query: 6   RHGYYPQVPPQHNGHXXXXXXXXXX------------AHAPTRPDAYFHAPRG-YNNSEG 146
           +HGY P  PPQ                             P RP  Y+H P G  +N+EG
Sbjct: 551 QHGYQPYPPPQRGVQTPIRPGVQTPIRPGVQTPIRPGVQTPIRPGVYYHEPSGGSSNTEG 610

Query: 147 DRSYGGNNYNHKGGSWVPPVNPNAGRGYNNNPRQAGNQFSALGRGGGRRPPQSDYRR 317
           D+ YGG   N +GG  VP     AGRGYN  PRQ GNQFSALGRGG RRPPQSD RR
Sbjct: 611 DKPYGGGYNNKRGG--VPWARGGAGRGYNG-PRQQGNQFSALGRGGNRRPPQSDNRR 664


>ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
          Length = 1099

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 44/104 (42%), Positives = 51/104 (49%)
 Frame = +3

Query: 6    RHGYYPQVPPQHNGHXXXXXXXXXXAHAPTRPDAYFHAPRGYNNSEGDRSYGGNNYNHKG 185
            +H     VPP  + H           H P  P +Y H P  Y     +  Y   +YN + 
Sbjct: 1000 QHVSQSPVPPIDHFHQQSRYSSYPNYHEPYEPGSY-HPP--YEPGSYNPPYEPGSYNPQD 1056

Query: 186  GSWVPPVNPNAGRGYNNNPRQAGNQFSALGRGGGRRPPQSDYRR 317
            G W P VN NAGRGY N PR + N FSALGRG  R PP S YRR
Sbjct: 1057 GGWAPQVNQNAGRGYGN-PRPSSNHFSALGRGNDRGPPSSGYRR 1099


>ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum lycopersicum]
          Length = 1109

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 43/104 (41%), Positives = 48/104 (46%)
 Frame = +3

Query: 6    RHGYYPQVPPQHNGHXXXXXXXXXXAHAPTRPDAYFHAPRGYNNSEGDRSYGGNNYNHKG 185
            +H     VPP  + H           H P  P +Y H P  Y        Y    YN + 
Sbjct: 1010 QHVSQSPVPPIDHFHQQSRYSSYPNYHEPYEPGSY-HPP--YEPVSYHPPYEPGPYNPQD 1066

Query: 186  GSWVPPVNPNAGRGYNNNPRQAGNQFSALGRGGGRRPPQSDYRR 317
            G W P VN NAGRGY N PR + N FSALGR   R PP S YRR
Sbjct: 1067 GVWAPQVNQNAGRGYGN-PRPSSNHFSALGRRNDRGPPSSGYRR 1109


>ref|XP_006342572.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
          Length = 1117

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
 Frame = +3

Query: 9    HGYYPQVPPQH--NGHXXXXXXXXXXAHAPTRPDAYFHAPRGYNNSEGDRSYGGNNYNHK 182
            HG++     Q+  + H             P  P   FH   GY+ S      G  +YN +
Sbjct: 1017 HGHHTDGMQQNGAHSHSSYASHPQHVGQIPVPPTTSFHQQSGYDASTSYEPRGAESYNQR 1076

Query: 183  GGSWVPPVNPNAGRGYNNNPRQAGNQFSALGRGGGRRPPQSDYRR 317
            GG          GRGY++ P  +GNQFSA GRGG RRPP S +RR
Sbjct: 1077 GGGRAS--QKQNGRGYHH-PHPSGNQFSAFGRGGNRRPP-SGHRR 1117


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