BLASTX nr result

ID: Mentha25_contig00025047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00025047
         (406 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK14364.1| transcription factor [Populus trichocarpa]             72   6e-11
ref|XP_006376294.1| no apical meristem family protein [Populus t...    72   6e-11
ref|XP_002325991.2| hypothetical protein POPTR_0019s11330g [Popu...    68   2e-09
gb|ADR00341.1| wood-associated NAC domain transcription factor 6...    68   2e-09
ref|XP_002526818.1| NAC domain-containing protein, putative [Ric...    59   5e-07
ref|XP_007143649.1| hypothetical protein PHAVU_007G089600g [Phas...    57   2e-06

>dbj|BAK14364.1| transcription factor [Populus trichocarpa]
          Length = 319

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
 Frame = +1

Query: 1   PSHKQGYEAWN---YMRNMSY-RPPSYXXXXXXXXXXXXXXQSQTPNFHQPPFLAEALNS 168
           P+ +QG+EAWN   Y+ N+++ RPPS+               +Q+ +FHQP   +  L S
Sbjct: 157 PNQRQGFEAWNHAYYVNNINHARPPSFSDTVTTTHTVHP---NQSASFHQPFSSSSDLIS 213

Query: 169 SSCTFDN--QMVEIPKLDSPS-ISTSFATNDTNF-ASEEAHEDIKSSFGSHFSEWKSFDK 336
                DN  ++VE+P+LDSPS +STSFA  + NF  + E ++D +S+  S + +WKS D 
Sbjct: 214 HQEFLDNNNRLVELPQLDSPSTLSTSFAPKEGNFHQTNEDYDDERSNNSSQYIDWKSLDT 273

Query: 337 LL 342
           LL
Sbjct: 274 LL 275


>ref|XP_006376294.1| no apical meristem family protein [Populus trichocarpa]
           gi|312618440|gb|ADR00340.1| wood-associated NAC domain
           transcription factor 6A [Populus trichocarpa]
           gi|550325570|gb|ERP54091.1| no apical meristem family
           protein [Populus trichocarpa]
          Length = 319

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
 Frame = +1

Query: 1   PSHKQGYEAWN---YMRNMSY-RPPSYXXXXXXXXXXXXXXQSQTPNFHQPPFLAEALNS 168
           P+ +QG+EAWN   Y+ N+++ RPPS+               +Q+ +FHQP   +  L S
Sbjct: 157 PNQRQGFEAWNHAYYVNNINHARPPSFSDTVTTTHTVHP---NQSASFHQPFSSSSDLIS 213

Query: 169 SSCTFDN--QMVEIPKLDSPS-ISTSFATNDTNF-ASEEAHEDIKSSFGSHFSEWKSFDK 336
                DN  ++VE+P+LDSPS +STSFA  + NF  + E ++D +S+  S + +WKS D 
Sbjct: 214 HQEFLDNNNRLVELPQLDSPSTLSTSFAPKEGNFHQTNEDYDDERSNNSSQYIDWKSLDT 273

Query: 337 LL 342
           LL
Sbjct: 274 LL 275


>ref|XP_002325991.2| hypothetical protein POPTR_0019s11330g [Populus trichocarpa]
           gi|550317281|gb|EEF00373.2| hypothetical protein
           POPTR_0019s11330g [Populus trichocarpa]
          Length = 307

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
 Frame = +1

Query: 1   PSHKQGYEAWN---YMRNMSY-RPPSYXXXXXXXXXXXXXXQSQTPNFHQPPFLAEALNS 168
           P+ +QG+EAW+   Y+ ++++ RPPS+              Q  +    Q PF + +   
Sbjct: 157 PNQRQGFEAWSHAYYLNDINHARPPSFSDTVTTAHNMVRPNQGAS---FQQPFGSNSDLV 213

Query: 169 SSCTF---DNQMVEIPKLDSPS-ISTSFATNDTNF-ASEEAHEDIKSSFGSHFSEWKSFD 333
           S+ TF   +NQ+VE+P+LDSPS +STSFA  + NF  + E +++ +S+  S + +WK+FD
Sbjct: 214 SNQTFLDNNNQLVELPELDSPSTLSTSFAAKEGNFHQTNEDYDEERSNNSSQYIDWKNFD 273

Query: 334 KLL 342
            LL
Sbjct: 274 TLL 276


>gb|ADR00341.1| wood-associated NAC domain transcription factor 6B [Populus
           trichocarpa] gi|327397096|dbj|BAK14365.1| transcription
           factor [Populus trichocarpa]
          Length = 322

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
 Frame = +1

Query: 1   PSHKQGYEAWN---YMRNMSY-RPPSYXXXXXXXXXXXXXXQSQTPNFHQPPFLAEALNS 168
           P+ +QG+EAW+   Y+ ++++ RPPS+              Q  +    Q PF + +   
Sbjct: 159 PNQRQGFEAWSHAYYLNDINHARPPSFSDTVTTAHNMVRPNQGAS---FQQPFGSNSDLV 215

Query: 169 SSCTF---DNQMVEIPKLDSPS-ISTSFATNDTNF-ASEEAHEDIKSSFGSHFSEWKSFD 333
           S+ TF   +NQ+VE+P+LDSPS +STSFA  + NF  + E +++ +S+  S + +WK+FD
Sbjct: 216 SNQTFLDNNNQLVELPELDSPSTLSTSFAAKEGNFHQTNEDYDEERSNNSSQYIDWKNFD 275

Query: 334 KLL 342
            LL
Sbjct: 276 TLL 278


>ref|XP_002526818.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223533822|gb|EEF35553.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 334

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 21/135 (15%)
 Frame = +1

Query: 1   PSHKQGYEAWN---YMRNMS--YRPP---SYXXXXXXXXXXXXXXQSQTPNFHQP----- 141
           P+ + G+EAWN   Y  N++   RPP   +               QS + NFH P     
Sbjct: 159 PNQRPGFEAWNHAYYTNNINNHVRPPFSSADTVTATATQMIHHQNQSTSSNFHHPLISSE 218

Query: 142 PFLAEALNSSSCTFDNQMVEIPKLDSP--SISTSFAT------NDTNFASEEAHEDIKSS 297
           P L    +++    +NQ++++P+LDSP  ++STSFAT      N  +    E  E+ +S+
Sbjct: 219 PELVSGSHTTLILDNNQLIDLPQLDSPPSTLSTSFATRKGYHHNSQSGVGNEDFEEERSN 278

Query: 298 FGSHFSEWKSFDKLL 342
             + F +WK+ D LL
Sbjct: 279 NSTQFIDWKNLDSLL 293


>ref|XP_007143649.1| hypothetical protein PHAVU_007G089600g [Phaseolus vulgaris]
           gi|561016839|gb|ESW15643.1| hypothetical protein
           PHAVU_007G089600g [Phaseolus vulgaris]
          Length = 334

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
 Frame = +1

Query: 1   PSHKQGYEAW-------NYMRNMSY-RPPSYXXXXXXXXXXXXXXQSQTPNFHQP----- 141
           PSH+QGYEAW        ++R+ S+ RP S                ++ P+F  P     
Sbjct: 170 PSHRQGYEAWCSSSSHQQFLRDQSFARPLSIADILNETNVPHHHHPAEAPSFSLPFGSDQ 229

Query: 142 -PFLAEALNSSSCTFDNQMVEIPKLDSPSISTSFATNDTN------FASEEAHEDIKSSF 300
            PF+      +    D Q++E+P+LDSP  + SFA  + N        +EE   D +S+ 
Sbjct: 230 QPFIL----PNQTVMDKQLIELPQLDSP--TASFAMKECNQQHHNGLTNEEYCSDERSNS 283

Query: 301 GSHFSEWKSFDKLLG 345
            +   +WKS D L G
Sbjct: 284 SAQGIDWKSLDNLFG 298


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